BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122729.4 - phase: 0
(113 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
H3_WHEAT (P68428) Histone H3 185 1e-47
H3_PEA (P68427) Histone H3 185 1e-47
H3_ONOVI (P68430) Histone H3 185 1e-47
H3_MEDSA (P68429) Histone H3 185 1e-47
H3_MAIZE (P05203) Histone H3 184 3e-47
H3_ARATH (P59226) Histone H3 184 3e-47
H3_ENCAL (P08903) Histone H3 183 7e-47
H32_ORYSA (P08860) Histone H3 182 2e-46
H3_URECA (P84239) Histone H3 180 6e-46
H3_TIGCA (P84237) Histone H3 180 6e-46
H3_PORAF (P84232) Histone H3 180 6e-46
H3_PLADU (P84235) Histone H3 180 6e-46
H3_ONCMY (P84234) Histone H3 180 6e-46
H3_ICTBU (P84231) Histone H3 180 6e-46
H3_DROME (P02299) Histone H3 180 6e-46
H3_DROHY (P84236) Histone H3 180 6e-46
H3_CHITH (P84238) Histone H3 (H3) 180 6e-46
H3_CAIMO (P84230) Histone H3 180 6e-46
H3B_HUMAN (Q93081) Histone H3/b 180 6e-46
H32_MOUSE (P84228) Histone H3.2 180 6e-46
>H3_WHEAT (P68428) Histone H3
Length = 135
Score = 185 bits (470), Expect = 1e-47
Identities = 97/112 (86%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_PEA (P68427) Histone H3
Length = 135
Score = 185 bits (470), Expect = 1e-47
Identities = 97/112 (86%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_ONOVI (P68430) Histone H3
Length = 135
Score = 185 bits (470), Expect = 1e-47
Identities = 97/112 (86%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_MEDSA (P68429) Histone H3
Length = 135
Score = 185 bits (470), Expect = 1e-47
Identities = 97/112 (86%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_MAIZE (P05203) Histone H3
Length = 135
Score = 184 bits (467), Expect = 3e-47
Identities = 96/112 (85%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV+ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_ARATH (P59226) Histone H3
Length = 135
Score = 184 bits (467), Expect = 3e-47
Identities = 96/112 (85%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV+ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_ENCAL (P08903) Histone H3
Length = 135
Score = 183 bits (464), Expect = 7e-47
Identities = 95/112 (84%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV+ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H32_ORYSA (P08860) Histone H3
Length = 135
Score = 182 bits (461), Expect = 2e-46
Identities = 95/112 (84%), Positives = 100/112 (88%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE AE +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQTSAVRALQEAAERYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_URECA (P84239) Histone H3
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_TIGCA (P84237) Histone H3
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_PORAF (P84232) Histone H3
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_PLADU (P84235) Histone H3
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_ONCMY (P84234) Histone H3
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_ICTBU (P84231) Histone H3
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_DROME (P02299) Histone H3
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_DROHY (P84236) Histone H3
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_CHITH (P84238) Histone H3 (H3)
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3_CAIMO (P84230) Histone H3
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H3B_HUMAN (Q93081) Histone H3/b
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 100/112 (89%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEACEATLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>H32_MOUSE (P84228) Histone H3.2
Length = 135
Score = 180 bits (456), Expect = 6e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.328 0.140 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,710,577
Number of Sequences: 164201
Number of extensions: 373400
Number of successful extensions: 1145
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1040
Number of HSP's gapped (non-prelim): 101
length of query: 113
length of database: 59,974,054
effective HSP length: 89
effective length of query: 24
effective length of database: 45,360,165
effective search space: 1088643960
effective search space used: 1088643960
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC122729.4