BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC122726.13 - phase: 0 
         (587 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I      76  2e-13
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13...    69  3e-11
PT09_YEAST (P32522) PET309 protein, mitochondrial precursor            43  0.003
CIGB_DICDI (Q94481) Protein cigB (Fragment)                            43  0.003
YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR...    42  0.006
YEQ7_YEAST (P40050) Hypothetical 79.5 kDa protein in PTP3-SER3 i...    33  2.7
YC81_MYCPN (P75496) Hypothetical lipoprotein MPN281 precursor (A...    33  2.7
RT27_HUMAN (Q92552) Mitochondrial 28S ribosomal protein S27 (S27...    32  4.6
LEP_BUCBP (Q89AM6) Signal peptidase I (EC 3.4.21.89) (SPase I) (...    32  4.6
ENV_SIVCZ (P17281) Envelope polyprotein GP160 precursor [Contain...    32  4.6
DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (P...    32  6.0
CCD2_HUMAN (Q96LB3) Coiled-coil domain containing protein 2 (Cap...    31  7.9
ASC2_MOUSE (O35885) Achaete-scute homolog 2 (Mash-2)                   31  7.9

>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
          Length = 1261

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 91/441 (20%), Positives = 185/441 (41%), Gaps = 25/441 (5%)

Query: 134  ALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYK 193
            +L+  ML  A  + ++++  +  F +  +    L       L+S L K  +   V+ V++
Sbjct: 772  SLVSKMLTSASPEQVDVNILFFQFGKLIETNKFLHPEVYPTLISVLSKNKRFDAVQRVFE 831

Query: 194  EM--IKRRIHT-NLNTFNIFINGLCRAGKLN-------KAEDAI-EDMKAWGISPNVVTY 242
                + R+I T +L   N F+  +  A  L+       K+ +   ++MK  G  P   T+
Sbjct: 832  HSKHLYRKISTKSLEKANWFMALILDAMILSSSFARQFKSSNLFCDNMKMLGYIPRASTF 891

Query: 243  NTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEE 302
              L++   +RG       A    +E   + + P+   +N ++    +        K F+E
Sbjct: 892  AHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQE 951

Query: 303  MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL-GLKPNIVTYNALINGFCKKK 361
            M++ GL P  VTY ++IN  C  G    A  L+ +M      +P +  YN +I    +  
Sbjct: 952  MKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTM 1011

Query: 362  MMKE-ATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG-FSLCSSMLDEGILPNVST 419
              +E A   ++ +   ++ P+  T+  ++DAY     +  G       +++   +P +S 
Sbjct: 1012 FNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPILSM 1071

Query: 420  YNCLIAGLCRK--QDLQAA----KELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK 473
            +      +      D+QAA       L + +   ++ D   +   I+ L  ND+     +
Sbjct: 1072 HYAAYIHILGNVVSDVQAATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQ 1131

Query: 474  LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKE---RKQPNVVTYNVLIK 530
            ++++M    +  N    N L+ G+   G +  A      +E E    K+P+  TY  +++
Sbjct: 1132 IVSDMKRYNVSLNAYIVNALIKGFTKVGMISKARYYFDLLECEGMSGKEPS--TYENMVR 1189

Query: 531  GYCKINKLEAANGLLNEMLEK 551
             Y  +N    A  ++ ++  K
Sbjct: 1190 AYLSVNDGRKAMEIVEQLKRK 1210



 Score = 35.8 bits (81), Expect = 0.32
 Identities = 29/110 (26%), Positives = 43/110 (38%), Gaps = 5/110 (4%)

Query: 457 ILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK---AALNVRTRM 513
           IL     +  KS N     + M  LG  P   T+  L++     G       ALN+    
Sbjct: 860 ILSSSFARQFKSSNL--FCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEET 917

Query: 514 EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 563
           ++   +P+V  YN ++    +  +      L  EM E GL P   TY  V
Sbjct: 918 KRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTV 967


>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
           (Leucine-rich PPR-motif containing protein)
          Length = 1273

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 40/155 (25%), Positives = 72/155 (45%)

Query: 290 DENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVT 349
           +E    A + ++ +QK G   ++  YN+L+     N       D   KM    ++PN VT
Sbjct: 19  EERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVT 78

Query: 350 YNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSML 409
           Y  LI  +C    ++ A+K+   +  ++L      F+ ++  + + G ME   ++ + M 
Sbjct: 79  YQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMR 138

Query: 410 DEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 444
           D GI P   TY  L+     K D+   K+ L ++E
Sbjct: 139 DAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVE 173



 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 39/150 (26%), Positives = 69/150 (46%)

Query: 366 ATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIA 425
           A +++D + K   V +V  +N ++  Y +           + M +  I PN  TY  LIA
Sbjct: 25  AHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIA 84

Query: 426 GLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP 485
             C   D++ A ++L  M+ K L      ++ L+ G  +     NAE +L  M + G++P
Sbjct: 85  SYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEP 144

Query: 486 NHVTYNTLMDGYCMEGKLKAALNVRTRMEK 515
              TY  L++ Y  +G +        ++EK
Sbjct: 145 GPDTYLALLNAYAEKGDIDHVKQTLEKVEK 174



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 36/149 (24%), Positives = 67/149 (44%)

Query: 423 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 482
           L+  L  ++  + A  + + ++  G   DV  YN L+    +N+   +    L +M    
Sbjct: 12  LLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEAN 71

Query: 483 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAAN 542
           ++PN VTY  L+  YC  G ++ A  +   M+ +        ++ L+ G+ +   +E A 
Sbjct: 72  IQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAE 131

Query: 543 GLLNEMLEKGLNPNRTTYDIVRLEMLEKG 571
            +L  M + G+ P   TY  +     EKG
Sbjct: 132 NILTVMRDAGIEPGPDTYLALLNAYAEKG 160



 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 38/163 (23%), Positives = 75/163 (45%), Gaps = 6/163 (3%)

Query: 327 KLEEAID----LWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNV 382
           KLEE  +    +WD +  LG   ++  YNAL+  + + +     T     + +  + PN 
Sbjct: 17  KLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNR 76

Query: 383 ITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNE 442
           +T+  +I +YC  G +E    +   M  + +    + ++ L+ G  R  D++ A+ +L  
Sbjct: 77  VTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTV 136

Query: 443 MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN--EMFNLGL 483
           M + G++    TY  L++   +     + ++ L   E F L L
Sbjct: 137 MRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHL 179



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 38/151 (25%), Positives = 68/151 (44%), Gaps = 3/151 (1%)

Query: 228 EDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 287
           + ++  G   +V  YN L+  Y +       +    F+ +M    I PN VT+  LI  +
Sbjct: 30  DTLQKLGAVYDVSHYNALLKVYLQNEYK---FSPTDFLAKMEEANIQPNRVTYQRLIASY 86

Query: 288 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 347
           C   ++  A K    M+ + L      +++L+ G    G +E A ++   M   G++P  
Sbjct: 87  CNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGP 146

Query: 348 VTYNALINGFCKKKMMKEATKVFDDVSKQEL 378
            TY AL+N + +K  +    +  + V K EL
Sbjct: 147 DTYLALLNAYAEKGDIDHVKQTLEKVEKFEL 177



 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 79/368 (21%), Positives = 137/368 (36%), Gaps = 63/368 (17%)

Query: 169 LTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIE 228
           L SC  LL  L  E +      ++  + K     +++ +N  +    +        D + 
Sbjct: 6   LRSCGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLA 65

Query: 229 DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFC 288
            M+   I PN VTY  L+  YC  G      K   FMK      +   E  F+ L+ G  
Sbjct: 66  KMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK---TKDLPVTEAVFSALVTGHA 122

Query: 289 KDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIV 348
           +  ++  A+     M+  G++P   TY +L+N     G ++      +K+    L     
Sbjct: 123 RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDR 182

Query: 349 TYNALINGF-----------------CKKKMMKEA--------TKVFDDVSKQELV---- 379
               +I  F                 C+++ + +A        T+  +DV+ Q L+    
Sbjct: 183 DLLQIIFSFSKAGYLSMSQKFWKKFTCERRYIPDAMNLILLLVTEKLEDVALQILLACPV 242

Query: 380 -----PNV---------ITFNTMIDA---YCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 422
                P+V         +T NT ++    YCK+    +  S           P   T +C
Sbjct: 243 SKEDGPSVFGSFFLQHCVTMNTPVEKLTDYCKKLKEVQMHS----------FPLQFTLHC 292

Query: 423 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 482
            +  L  K DL  AK L+  ++ +G       +  L+ G  K    +   ++L  M  LG
Sbjct: 293 AL--LANKTDL--AKALMKAVKEEGFPIRPHYFWPLLVGRRKEKNVQGIIEILKGMQELG 348

Query: 483 LKPNHVTY 490
           + P+  TY
Sbjct: 349 VHPDQETY 356



 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 36/140 (25%), Positives = 61/140 (42%), Gaps = 1/140 (0%)

Query: 412 GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNA 471
           G + +VS YN L+    + +   +  + L +ME   ++ + VTY  LI   C       A
Sbjct: 36  GAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGA 95

Query: 472 EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 531
            K+L  M    L      ++ L+ G+   G ++ A N+ T M     +P   TY  L+  
Sbjct: 96  SKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNA 155

Query: 532 YCKINKLEAANGLLNEMLEK 551
           Y +   ++     L E +EK
Sbjct: 156 YAEKGDIDHVKQTL-EKVEK 174



 Score = 37.4 bits (85), Expect = 0.11
 Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 283 LIDGFCKDENVAAAKKAFEEMQKQGLKPNIVT--YNSLINGLCNNGKLEEAIDLWDKMVG 340
           LI   C +EN+   +KA E   K   + ++VT  Y +LIN  C + K+E+A++L ++   
Sbjct: 564 LILVLCSEENM---QKALELKAKY--ESDMVTGGYAALINLCCRHDKVEDALNLKEEFDR 618

Query: 341 LGLKPNIVT--YNALINGFCKKKMMKEATKVFDDVSKQELV---PNVITFNTMIDAYCKE 395
           L     + T  Y  L+    K   +++A K+  ++ +++++      ++F  M++     
Sbjct: 619 LDSSAVLDTGNYLGLVRVLAKHGKLQDAIKILKEMKEKDVLIKDTTALSFFHMLNGAALR 678

Query: 396 GMMEEGFSLCSSMLDEGIL-PNVSTYNCLIAGLCRKQDLQAAKEL 439
           G +E    L  +++  G+  P+ +    L+     K DL  A E+
Sbjct: 679 GEIETVKQLHEAIVTLGLAEPSTNISFPLVTVHLEKGDLSTALEV 723


>PT09_YEAST (P32522) PET309 protein, mitochondrial precursor
          Length = 965

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 57/313 (18%), Positives = 126/313 (40%), Gaps = 5/313 (1%)

Query: 280 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 339
           F+ L+    +  N  A ++ F  +   G  P+I  Y  L+  +   G+L+    L+ +++
Sbjct: 314 FDYLLVAHSRLHNWDALQQQFNALFGIGKLPSIQHYGILMYTMARIGELDSVNKLYTQLL 373

Query: 340 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 399
             G+ P      +L+    K          F+   K ++ P+  T   M+  Y     ++
Sbjct: 374 RRGMIPTYAVLQSLLYAHYKVGDFAACFSHFELFKKYDITPSTATHTIMLKVYRGLNDLD 433

Query: 400 EGFSLCSSML-DEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM-ENKGLKGDVVTYNI 457
             F +   +  D  +      +  LI   C+  +   A+EL N M E+  ++    + + 
Sbjct: 434 GAFRILKRLSEDPSVEITEGHFALLIQMCCKTTNHLIAQELFNLMTEHYNIQHTGKSISA 493

Query: 458 LIDGLCKNDKSRNAEKLLNE-MFNLGLKPNHVT-YNTLMDGYCMEGKLKAALNVRTRMEK 515
           L+D   ++++   A  L  +   NL  +   ++ YN  +  Y           +  ++  
Sbjct: 494 LMDVYIESNRPTEAIALFEKHSKNLSWRDGLISVYNKAIKAYIGLRNANKCEELFDKITT 553

Query: 516 ERKQPNVVTYNVLIKGYCKINK-LEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSP 574
            +   N   Y ++IK    +N+  E A  +++++++  +     T+  + +E  +K    
Sbjct: 554 SKLAVNSEFYKMMIKFLVTLNEDCETALSIIDQLIKHSVIKVDATHFEIIMEAYDKEGYR 613

Query: 575 DIEGHLYNISSMS 587
           D   +LY   S +
Sbjct: 614 DGIINLYKTMSQN 626


>CIGB_DICDI (Q94481) Protein cigB (Fragment)
          Length = 735

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 87/347 (25%), Positives = 147/347 (42%), Gaps = 65/347 (18%)

Query: 163 YGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNI-------FINGLC 215
           YGF   LT    ++   VKE ++GD++   +E+I   I + L T  +          G+ 
Sbjct: 372 YGFNQKLTK--GIIPEGVKELRLGDIK---QELIIDSIPSTLTTVILCDGFNQKLTKGII 426

Query: 216 RAG-KLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAG------KMYKAEAFMKEM 268
             G K+    D  +++    I PN VT   L+DG+ ++ + G      K        +E+
Sbjct: 427 PEGVKVLYIGDIKQELIIDSI-PNTVTRVRLLDGFNQKLTKGIIPESVKELHIGNIKQEL 485

Query: 269 LANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK--------PNIVTYNSLIN 320
           + + I PN VT  TL DGF +        +  +E+    LK        PN VT   L +
Sbjct: 486 IIDSI-PNTVTTITLCDGFNQKLTKGIIPEGVKELYIGNLKQELIIDSIPNTVTTVRLCD 544

Query: 321 GLCNNGKLEEAI-----------DLWDKMVGLGLKPNIVTYNALINGF---CKKKMMKEA 366
           G   N KL + I           D+  +++ +   PN VT   L +GF     K ++ E 
Sbjct: 545 GF--NQKLTKGIIPEGVKELYIRDIKQELI-IDSIPNTVTTVILCDGFNQKLTKGIIPEW 601

Query: 367 TK--VFDDVSKQEL----VPNVITFNTMIDAY---CKEGMMEEGFSLCSSMLDE------ 411
            K     D+ KQEL    +PN +T   ++D +     +G++ E  S+    +D+      
Sbjct: 602 VKGLCLGDI-KQELIIDSIPNTVTTVRLLDGFNQKLTKGIIPE--SVKELYIDDIKQELI 658

Query: 412 -GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 457
              +PN  T   L+ G  +K       E + E+    +K +++  +I
Sbjct: 659 IDSIPNTVTTVRLLDGFNQKLTKGIIPEWVKELHIGDIKQELIIDSI 705


>YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR1
           intergenic region
          Length = 864

 Score = 41.6 bits (96), Expect = 0.006
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 342 GLKPNIVTYNALINGFCKKKMMKEATKVFDDVS--KQELVPNVITFNTMIDAYCKEGMME 399
           G+ PN      +I  + +K+M K+A   FD +     +  P++ T+NTM+    KE    
Sbjct: 315 GITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFP 374

Query: 400 EGFSLCSSMLDEGILPNVSTY 420
           +   L   + D  I P  +TY
Sbjct: 375 KALDLFQEIQDHNIKPTTNTY 395



 Score = 41.2 bits (95), Expect = 0.008
 Identities = 24/83 (28%), Positives = 41/83 (48%), Gaps = 1/83 (1%)

Query: 233 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 292
           +GI+PN     T++  Y ++    + +     MK  L+ K  P+  T+NT++    K+ N
Sbjct: 314 YGITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMK-FLSTKHFPDICTYNTMLRICEKERN 372

Query: 293 VAAAKKAFEEMQKQGLKPNIVTY 315
              A   F+E+Q   +KP   TY
Sbjct: 373 FPKALDLFQEIQDHNIKPTTNTY 395



 Score = 37.0 bits (84), Expect = 0.14
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 273 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK--PNIVTYNSLINGLCNNGKLEE 330
           I PN+    T+I  + + E    A   F+ M+    K  P+I TYN+++          +
Sbjct: 316 ITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFPK 375

Query: 331 AIDLWDKMVGLGLKPNIVTY 350
           A+DL+ ++    +KP   TY
Sbjct: 376 ALDLFQEIQDHNIKPTTNTY 395



 Score = 34.7 bits (78), Expect = 0.71
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 5/91 (5%)

Query: 367 TKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM--LDEGILPNVSTYNCLI 424
           TK  DD     + PN     T+I  Y ++ M ++ ++   +M  L     P++ TYN ++
Sbjct: 308 TKFRDDYG---ITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTML 364

Query: 425 AGLCRKQDLQAAKELLNEMENKGLKGDVVTY 455
               ++++   A +L  E+++  +K    TY
Sbjct: 365 RICEKERNFPKALDLFQEIQDHNIKPTTNTY 395



 Score = 32.3 bits (72), Expect = 3.5
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 482 GLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME--KERKQPNVVTYNVLIKGYCKINKLE 539
           G+ PN     T++  Y  +   K A N    M+    +  P++ TYN +++   K     
Sbjct: 315 GITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFP 374

Query: 540 AANGLLNEMLEKGLNPNRTTY 560
            A  L  E+ +  + P   TY
Sbjct: 375 KALDLFQEIQDHNIKPTTNTY 395



 Score = 32.0 bits (71), Expect = 4.6
 Identities = 20/84 (23%), Positives = 38/84 (44%), Gaps = 2/84 (2%)

Query: 307 GLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLK--PNIVTYNALINGFCKKKMMK 364
           G+ PN     ++I         ++A + +D M  L  K  P+I TYN ++    K++   
Sbjct: 315 GITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFP 374

Query: 365 EATKVFDDVSKQELVPNVITFNTM 388
           +A  +F ++    + P   T+  M
Sbjct: 375 KALDLFQEIQDHNIKPTTNTYIMM 398


>YEQ7_YEAST (P40050) Hypothetical 79.5 kDa protein in PTP3-SER3
           intergenic region
          Length = 688

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 34/132 (25%), Positives = 60/132 (44%), Gaps = 17/132 (12%)

Query: 367 TKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG 426
           T +F+ +SKQE          ++     E +++   SLC    D+  L  +  YN  +A 
Sbjct: 238 TILFNGLSKQE---------NLVSKKYGELVLKTIDSLC----DKNELTEIE-YNTALAA 283

Query: 427 LCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPN 486
           L    D     +LLN+ +  GLK D +TY ++I    +    +    +LN++ N    P+
Sbjct: 284 LINCTDETLVFKLLNK-KCPGLKKDSITYTLMIRSCTRIADEKRFMVVLNDLMN--KIPD 340

Query: 487 HVTYNTLMDGYC 498
           +   + L+  YC
Sbjct: 341 YCVDSKLLFEYC 352


>YC81_MYCPN (P75496) Hypothetical lipoprotein MPN281 precursor
           (A65_orf377)
          Length = 377

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 52/216 (24%), Positives = 82/216 (37%), Gaps = 32/216 (14%)

Query: 274 CPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYN-------SLINGLCNNG 326
           C     F+   DG  K  +   +K A   +Q    K NIV          + I G  + G
Sbjct: 23  CGARGKFDQFDDGKIKLASSLTSKAAANALQTIIEKYNIVKSGKDYPIEITQIAGGYDGG 82

Query: 327 K--LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 384
           +  L+  + + DK     L   I+ Y  L++   +  M      +FD V+  +L PN + 
Sbjct: 83  RTDLQTRVSVKDKTNFYNL---ILNYPDLVSVLARSGM----ELLFDKVNVDKLEPNFLK 135

Query: 385 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 444
           FN  I    K G             + GI  ++ST   ++ G      L +AK+   E  
Sbjct: 136 FNEQISGVAKSG-------------NYGIPVSLSTDILVLNGPVLHYILNSAKK---EEA 179

Query: 445 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 480
           N  +K  + T  I   G    D   N + L  ++ N
Sbjct: 180 NSQVKSQIKTSQIQAKGSLTIDTDENTKSLWEKIQN 215


>RT27_HUMAN (Q92552) Mitochondrial 28S ribosomal protein S27 (S27mt)
           (MRP-S27)
          Length = 414

 Score = 32.0 bits (71), Expect = 4.6
 Identities = 31/138 (22%), Positives = 58/138 (41%), Gaps = 10/138 (7%)

Query: 263 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIV-----TYNS 317
           + M +    K+  + +T + LID     E +  A+    + +     PN       T ++
Sbjct: 55  SLMDKTFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHS---PNCWYLRNWTIHT 111

Query: 318 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 377
            I         ++A+      V  G+ P+  T+N L++ F KK+  K+A  V  +V  QE
Sbjct: 112 WIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQE 171

Query: 378 L--VPNVITFNTMIDAYC 393
              VP+    +  +  +C
Sbjct: 172 AFEVPSTQLLSLYVLFHC 189



 Score = 31.6 bits (70), Expect = 6.0
 Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 28/135 (20%)

Query: 428 CRKQDLQ--AAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNA-----EKLLNEMFN 480
           C K D Q  A   L+N+++  G+  D  T+N+L+D   K +  ++A     E ++ E F 
Sbjct: 116 CLKYDAQDKALYTLVNKVQY-GIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFE 174

Query: 481 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER-----------KQPNVVTYNVLI 529
           +   P+    +  +  +C+  K   +       E+ER           KQ N V ++  +
Sbjct: 175 V---PSTQLLSLYVLFHCLAKKTDFS------WEEERNFGASLLLPGLKQKNSVGFSSQL 225

Query: 530 KGYCKINKLEAANGL 544
            GY  + K+E   GL
Sbjct: 226 YGYALLGKVELQQGL 240


>LEP_BUCBP (Q89AM6) Signal peptidase I (EC 3.4.21.89) (SPase I)
           (Leader peptidase I)
          Length = 310

 Score = 32.0 bits (71), Expect = 4.6
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 447 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG-LKPNHVTYNTLMDGYCMEG--KL 503
           GL GD + YNIL   L     + N +   N   N   +KPN  T +  ++   +     L
Sbjct: 141 GLPGDKINYNILTKRLTITPNNINEQHTKNISINYKYIKPNDFTKHFKLNNIILNNVHSL 200

Query: 504 KAALNVRTRMEKERKQPNVVTYNVLIK 530
           +++ N   ++E  +++   + YN+  K
Sbjct: 201 ESSNNNLLQLEMYQEKIEKIAYNIFFK 227


>ENV_SIVCZ (P17281) Envelope polyprotein GP160 precursor [Contains:
           Exterior membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 854

 Score = 32.0 bits (71), Expect = 4.6
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)

Query: 372 DVSKQEL-VPNVI-TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 429
           D S QE+ +PNVI +FN       K  M+++      S+ D+ + P V      +   C 
Sbjct: 77  DPSPQEVFLPNVIESFNMW-----KNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTLQCS 131

Query: 430 KQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL--LNEMFNLGLKPN 486
           K +   AK L N+  +  L+    ++N+  +     DK +    L  + ++ NLG + N
Sbjct: 132 KANFSQAKNLTNQTSSPPLEMKNCSFNVTTE---LRDKKKQVYSLFYVEDVVNLGNENN 187


>DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7)
           (PolIII)
          Length = 1427

 Score = 31.6 bits (70), Expect = 6.0
 Identities = 19/81 (23%), Positives = 36/81 (43%), Gaps = 10/81 (12%)

Query: 179 LVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPN 238
           +VK NKI  ++   ++ ++  +HT ++  +           +N AE  I+    WG    
Sbjct: 311 IVKLNKIEKMDIAEEKRVELHLHTKMSAMD----------GMNSAESLIKRAAKWGHKAV 360

Query: 239 VVTYNTLVDGYCKRGSAGKMY 259
            +T + +V  Y +   A K Y
Sbjct: 361 AITDHGVVQAYPEAMEAAKKY 381


>CCD2_HUMAN (Q96LB3) Coiled-coil domain containing protein 2
           (Capillary morphogenesis protein-1) (CMG-1)
          Length = 600

 Score = 31.2 bits (69), Expect = 7.9
 Identities = 24/108 (22%), Positives = 53/108 (48%), Gaps = 3/108 (2%)

Query: 443 MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGK 502
           +E K L+G +  YN+L+D L  N +    E+++N+   L  + +  T +  +     + K
Sbjct: 141 VEIKELQGQLADYNMLVDKLNTNTE---MEEVMNDYNMLKAQNDRETQSLDVIFTERQAK 197

Query: 503 LKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLE 550
            K   +V   +E+E++  + +  N+  +   K  +++  N  L + L+
Sbjct: 198 EKQIRSVEEEIEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELD 245


>ASC2_MOUSE (O35885) Achaete-scute homolog 2 (Mash-2)
          Length = 263

 Score = 31.2 bits (69), Expect = 7.9
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 404 LCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLC 463
           L +S++D G LP +   +  +AG C  +  QA+ ELL     +   G     +       
Sbjct: 64  LNASLMDGGALPRLMPTSSGVAGACAARRRQASPELL-RCSRRRRSGATEASSSSAAVAR 122

Query: 464 KNDKSRNAEKLLN 476
           +N++ RN  KL+N
Sbjct: 123 RNERERNRVKLVN 135


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.319    0.136    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,670,454
Number of Sequences: 164201
Number of extensions: 2872000
Number of successful extensions: 7470
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7403
Number of HSP's gapped (non-prelim): 46
length of query: 587
length of database: 59,974,054
effective HSP length: 116
effective length of query: 471
effective length of database: 40,926,738
effective search space: 19276493598
effective search space used: 19276493598
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)