BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122726.12 + phase: 0
(280 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TAF7_YEAST (Q05021) Transcription initiation factor TFIID subuni... 40 0.008
BMS1_HUMAN (Q14692) Ribosome biogenesis protein BMS1 homolog 39 0.018
A3B1_MOUSE (Q9Z1T1) Adapter-related protein complex 3 beta 1 sub... 39 0.018
SFP1_YEAST (P32432) Zinc finger protein SFP1 37 0.041
DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin... 36 0.091
MAPB_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B) (... 36 0.12
DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contai... 35 0.16
RIB7_METJA (Q58085) Putative 5-amino-6-(5-phosphoribosylamino)ur... 35 0.20
SME1_MOUSE (O54941) SWI/SNF related matrix associated actin depe... 34 0.45
DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains... 33 0.59
DBPA_YEAST (Q12389) Probable RNA-dependent helicase DBP10 (DEAD-... 33 0.59
SR40_YEAST (P32583) Suppressor protein SRP40 33 0.77
CYL1_BOVIN (P35662) Cylicin I (Multiple-band polypeptide I) 33 0.77
SKB5_SCHPO (Q9US59) Shk1 kinase-binding protein 5 33 1.0
CC68_YEAST (P32558) Cell division control protein 68 33 1.0
SIS2_CANTR (Q12600) SIS2 protein (Halotolerance protein HAL3) 32 1.3
PVDG_PLAKN (P50494) Duffy receptor, gamma form precursor (Erythr... 32 1.3
PRD2_HUMAN (Q13029) PR-domain zinc finger protein 2 (Retinoblast... 32 1.3
NUCL_MOUSE (P09405) Nucleolin (Protein C23) 32 1.3
NASP_HUMAN (P49321) Nuclear autoantigenic sperm protein (NASP) 32 1.3
>TAF7_YEAST (Q05021) Transcription initiation factor TFIID subunit 7
(TBP-associated factor 7) (TBP-associated factor 67 kDa)
(TAFII-67)
Length = 590
Score = 39.7 bits (91), Expect = 0.008
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 144 EDEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRES 182
E+EE+++ EED +D D DDE +D +E NV ++ ++E+
Sbjct: 520 EEEEEEEEEEDEVDEDEEDDEENDEDEDNVHEREHIQEN 558
>BMS1_HUMAN (Q14692) Ribosome biogenesis protein BMS1 homolog
Length = 1282
Score = 38.5 bits (88), Expect = 0.018
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 144 EDEEDDK-TEEDSIDIDVSDDELSDTEEANVTDK----TGVRESAYPTDKESFMDVLAAI 198
+DEEDD+ +E+D ++ SD+E + E A +TD+ G++ +++S MD L A
Sbjct: 443 DDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAVKGIKRRKLELEEDSEMD-LPAF 501
Query: 199 IVSEEFQGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGG 252
S++ ++E G + D S + A + I S EGS G
Sbjct: 502 ADSDDDLERSSAEEGEAEEADESSE-----EEDCTAGEKGISGSKAAGEGSKAG 550
>A3B1_MOUSE (Q9Z1T1) Adapter-related protein complex 3 beta 1
subunit (Beta3A-adaptin) (Adaptor protein complex AP-3
beta-1 subunit) (AP-3 complex beta-1 subunit) (Clathrin
assembly protein complex 3 beta-1 large chain)
Length = 1105
Score = 38.5 bits (88), Expect = 0.018
Identities = 33/118 (27%), Positives = 54/118 (44%), Gaps = 9/118 (7%)
Query: 144 EDEEDDKTEEDSIDIDVS-DDELSDTEEANVTDK--TGVRESAYPTDKESFMDVLAAIIV 200
EDE++D+ EE+ D D + D SD+E + ++ TG +S+ D S D
Sbjct: 686 EDEDEDEEEEEKEDEDENPSDSSSDSESGSGSESGDTGTEDSS--EDSSSGQDSETGSQA 743
Query: 201 SEEFQGIVASETGFTKGLDNGS----NTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
E Q + + + D+ + N SKAS+S + S+ S+ SE SG +
Sbjct: 744 EAERQKVAKRNSKTKRKSDSENREKKNENSKASESSSEESSSMEDSSSESESESGSDS 801
>SFP1_YEAST (P32432) Zinc finger protein SFP1
Length = 683
Score = 37.4 bits (85), Expect = 0.041
Identities = 31/125 (24%), Positives = 55/125 (43%), Gaps = 13/125 (10%)
Query: 143 VEDEE-DDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAA---I 198
VED++ DD ++D +D D DD+ DTE + ++ V + Y +++++D A +
Sbjct: 530 VEDQDIDDIDDDDDVDDDDDDDDDDDTENGSSSNGKSVHNNNYKMPQQAYIDDPARRLYV 589
Query: 199 IVSEEFQGIVASETGFTKGLDNGS---------NTGSKASKSPVANAESIPPSADNSEGS 249
+ EE + G K N + + K ++P I P + +S G
Sbjct: 590 MDHEEQKPFKCPVIGCEKTYKNQNGLKYHRLHGHQNQKLHENPDGTFSVIDPDSTDSFGD 649
Query: 250 SGGSA 254
GSA
Sbjct: 650 GMGSA 654
>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin
matrix protein-3) (DMP-3) [Contains: Dentin
phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
sialoprotein (DSP)]
Length = 934
Score = 36.2 bits (82), Expect = 0.091
Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 144 EDEEDDKTEEDSIDIDVSDDELSDTEEANVT-DKTGVRESAYPTDKESFMDVLAAIIVSE 202
+ E +DK E DS D D S D S ++ ++ + D + +S+ +D D + S+
Sbjct: 522 DSESEDKDESDSSDHDNSSDSESKSDSSDSSDDSSDSSDSSDSSDSSDSSDSSDSSDSSD 581
Query: 203 EFQGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
+S++ + G + S++ S +++ S+D+S+ S +
Sbjct: 582 SSDSNSSSDSSDSSGSSDSSDSSDTCDSSDSSDSSDSSDSSDSSDSSDSSDS 633
Score = 35.4 bits (80), Expect = 0.16
Identities = 21/106 (19%), Positives = 48/106 (44%)
Query: 145 DEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSEEF 204
D D DS D S D ++ ++ +D + +S+ +D D + S+
Sbjct: 796 DSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 855
Query: 205 QGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSS 250
+S++ + + S++ ++ S ++++S S+D+S+G S
Sbjct: 856 DSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSDSKDSSSDSSDGDS 901
Score = 33.1 bits (74), Expect = 0.77
Identities = 20/110 (18%), Positives = 46/110 (41%)
Query: 145 DEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSEEF 204
D D + DS D S D +E ++ ++ + +S+ +D D + S+
Sbjct: 733 DSSDSSSSSDSSDSSDSSDSSDSSESSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 792
Query: 205 QGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
+S++ + + SN+ + S +++ S+D+S+ S +
Sbjct: 793 NSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 842
>MAPB_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B)
(MAP1.2) (MAP1(X)) [Contains: MAP1 light chain LC1]
Length = 2464
Score = 35.8 bits (81), Expect = 0.12
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 10/107 (9%)
Query: 148 DDKTEEDSIDIDVSDDELSDTEEANVTDKT-GVRESAYPTDKESFMDVLAAIIVSEEFQG 206
DD+ EED D+ + EE DK RE Y DK D + A+ G
Sbjct: 994 DDRAEEDMDDVLEKGEAEQSEEEGEEEDKAEDAREEGYEPDKTEAEDYVMAVADKAAEAG 1053
Query: 207 IVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGS 253
+ + G+ G+ A + + + P S+ + E GGS
Sbjct: 1054 VTEEQYGY---------LGTSAKQPGIQSPSREPASSIHDETLPGGS 1091
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains:
Dentin phosphoprotein (Dentin phosphophoryn) (DPP);
Dentin sialoprotein (DSP)]
Length = 1253
Score = 35.4 bits (80), Expect = 0.16
Identities = 24/111 (21%), Positives = 50/111 (44%), Gaps = 7/111 (6%)
Query: 145 DEEDDKTEEDSIDIDVSD-DELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSEE 203
D D K++ + D SD D SD+ ++N +D + +S+ ++ + D S+
Sbjct: 618 DSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDS------SDS 671
Query: 204 FQGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
+S + + + SN+ + S +N+ S+D+S+ S S+
Sbjct: 672 SDSSDSSSSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSS 722
Score = 32.0 bits (71), Expect = 1.7
Identities = 22/113 (19%), Positives = 50/113 (43%), Gaps = 3/113 (2%)
Query: 145 DEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESA---YPTDKESFMDVLAAIIVS 201
D D + S D S+ SD++ +N +D + +S+ +D D + S
Sbjct: 709 DSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSS 768
Query: 202 EEFQGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
+ +S++ + ++ SN+ + S +++ + S+D+S+ S S+
Sbjct: 769 DSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSS 821
Score = 31.2 bits (69), Expect = 2.9
Identities = 21/110 (19%), Positives = 44/110 (39%), Gaps = 6/110 (5%)
Query: 145 DEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSEEF 204
D D DS D S D ++ ++ +D + ES+ +D D S+
Sbjct: 1059 DSSDSSGSSDSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSDSSDS------SDSS 1112
Query: 205 QGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
+S++ + + SN+ + S +++ S+D+S+ S +
Sbjct: 1113 DSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1162
Score = 30.0 bits (66), Expect = 6.6
Identities = 19/109 (17%), Positives = 43/109 (39%)
Query: 146 EEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSEEFQ 205
+ D DS D S D ++ ++ +D + S+ +D D + S
Sbjct: 970 DSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSD 1029
Query: 206 GIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
+S++ + + SN+ + S +++ S+D+S+ S +
Sbjct: 1030 SSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSGSSDSSDSSDSSDS 1078
Score = 29.6 bits (65), Expect = 8.6
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 13/110 (11%)
Query: 145 DEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSEEF 204
D D +S D S D E +N +D + +S+ +D +S S+
Sbjct: 866 DSSDSSDSSNSSDSSDSSDSSDSNESSNSSDSS---DSSNSSDSDS----------SDSS 912
Query: 205 QGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
+S++ + SN+ ++ S +N+ S+D+S S ++
Sbjct: 913 NSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNS 962
>RIB7_METJA (Q58085) Putative
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC
1.1.1.193) (HTP reductase)
Length = 224
Score = 35.0 bits (79), Expect = 0.20
Identities = 26/102 (25%), Positives = 51/102 (49%), Gaps = 14/102 (13%)
Query: 74 SNPKKQKLSIQVKDALGFADLTIGTGEVDLGSLQDTVPTDRI--VALQGG----WGFLRK 127
+N +K+K I++ + +G + G G+VDL L D + I + L+GG WG ++
Sbjct: 108 TNEEKEK-KIKILEDMGVEVVKCGRGKVDLKKLMDILYDKGIKSILLEGGGTLNWGMFKE 166
Query: 128 GLSGEILLRLTYKAY-------VEDEEDDKTEEDSIDIDVSD 162
GL E+ + + K + D E KT ++ + +++ +
Sbjct: 167 GLVDEVSVYIAPKIFGGKEAPTYVDGEGFKTVDECVKLELKN 208
>SME1_MOUSE (O54941) SWI/SNF related matrix associated actin
dependent regulator chromatin subfamily E member 1
(BRG1-associated factor 57)
Length = 411
Score = 33.9 bits (76), Expect = 0.45
Identities = 26/105 (24%), Positives = 49/105 (45%), Gaps = 19/105 (18%)
Query: 143 VEDEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSE 202
V ++ ++K +E+SI ++ + L DT E + + G ++ P DKES
Sbjct: 325 VANKAEEKKDEESIPMETEETHLEDTAE---SQQNGEEGTSTPEDKESGQ---------- 371
Query: 203 EFQGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSE 247
+G+ + E T + SNTGS+++ + V + P D +
Sbjct: 372 --EGVDSMEVEGT----SDSNTGSESNSATVEEPPTDPVPEDEKK 410
>DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains:
Dentin phosphoprotein (Dentin phosphophoryn) (DPP);
Dentin sialoprotein (DSP)]
Length = 687
Score = 33.5 bits (75), Expect = 0.59
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 148 DDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVL-AAIIVSEEFQG 206
+D + +D+ D D SD D E+ D++ +D ES D + S+
Sbjct: 499 EDDSSDDTSDTDDSDSNGDDDSESKDKDESDNSNHDNDSDSESKSDSSDSDSDSSDSSDS 558
Query: 207 IVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
+S++ T + S+T + S +++ + ++D+S+ S G S+
Sbjct: 559 SDSSDSSETSDSSDSSDTSDSSDSSDSSDSSNSSDTSDSSDSSDGDSS 606
Score = 31.6 bits (70), Expect = 2.3
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 21/104 (20%)
Query: 146 EEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSEEFQ 205
+ D ++ DS D D SD + SD++ +N +D S + S D
Sbjct: 596 DSSDSSDGDSSDGDSSDSDSSDSDSSNSSDSDSSDSSDSSSSDSSDSD------------ 643
Query: 206 GIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGS 249
+ D+ S++ SKS N++S S +SEGS
Sbjct: 644 ---------SDSKDSTSDSSDDNSKSGNGNSDSDSDSDSDSEGS 678
>DBPA_YEAST (Q12389) Probable RNA-dependent helicase DBP10 (DEAD-box
protein 10)
Length = 995
Score = 33.5 bits (75), Expect = 0.59
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 140 KAYVEDEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAY-PTDKESFMDVLAAI 198
K +ED++D+ +EED I D++++ + E++ D E+ Y P D + ++
Sbjct: 8 KRDLEDQDDNGSEEDDIAFDIANEIALNDSESDANDSDSEVEADYGPNDVQDVIE----- 62
Query: 199 IVSEEFQGIVASETGFTKGLDNGSNTGSKASKSPV 233
S+E +G+ + K + N+ + + P+
Sbjct: 63 YSSDEEEGVNNKKKAENKDIKKKKNSKKEIAAFPM 97
>SR40_YEAST (P32583) Suppressor protein SRP40
Length = 406
Score = 33.1 bits (74), Expect = 0.77
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 146 EEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSEEFQ 205
E D + S S DE S E+ K RES D E + A E
Sbjct: 97 ESDSSSSGSSSSSSSSSDESSSESESEDETKKRARES----DNEDAKETKKAKTEPESSS 152
Query: 206 GIVASETGFTKG--LDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSA 254
+S +G + ++GS + S +S S ++++S S +S+ SS S+
Sbjct: 153 SSESSSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSS 203
>CYL1_BOVIN (P35662) Cylicin I (Multiple-band polypeptide I)
Length = 667
Score = 33.1 bits (74), Expect = 0.77
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 140 KAYVEDEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAII 199
K + ++D+K ++ D + +D E D+++A K G ++S K+
Sbjct: 375 KGKKDSKKDNKKKDAKKDAESTDAESGDSKDAKKDSKKGKKDSKKDDKKKD--------- 425
Query: 200 VSEEFQGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADN-SEGSS 250
+++ +E+G +K S G K K A +++ AD+ SEG +
Sbjct: 426 -AKKDAESTDAESGDSKNAKKDSKKGKKDDKKKDAKKDAVSTDADSESEGDA 476
>SKB5_SCHPO (Q9US59) Shk1 kinase-binding protein 5
Length = 140
Score = 32.7 bits (73), Expect = 1.0
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 135 LRLTYKAYVEDEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKESFMDV 194
L + A V +EE+++ +D+ D + + D+E + T+ E + T + +V
Sbjct: 24 LHYGFHARVIEEEEERFVDDTFDETIEGSD--DSESIDDTEVFYDAEESESTHPSASFNV 81
Query: 195 LAAIIVSEEFQGIVASETGFTKG 217
LA + +F+ + +E GFT G
Sbjct: 82 LADAVALYDFEPLHDNELGFTTG 104
>CC68_YEAST (P32558) Cell division control protein 68
Length = 1035
Score = 32.7 bits (73), Expect = 1.0
Identities = 20/61 (32%), Positives = 30/61 (48%), Gaps = 15/61 (24%)
Query: 118 LQGGWGFLRKGLSGEILLRLTYKAYVEDEEDDKTEEDSIDIDVSDDELSDTEEANVTDKT 177
L GGW FL G +DE D++EE+ + + S+D++SD E A D+
Sbjct: 946 LDGGWNFLATGS--------------DDEASDESEEEVSEYEASEDDVSD-ESAFSEDEE 990
Query: 178 G 178
G
Sbjct: 991 G 991
>SIS2_CANTR (Q12600) SIS2 protein (Halotolerance protein HAL3)
Length = 531
Score = 32.3 bits (72), Expect = 1.3
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 47 NSQTTVIGWRPWNAN---LESAPQDFHMLVSNPKKQKLSIQVKD-----ALGFADLTIGT 98
N T VI R WN++ L + D H S+ K++L + D L + G+
Sbjct: 378 NLLTNVI--RAWNSSYPILLAPAMDSHSYSSSTTKRQLRLIADDMPWIEVLKPLEKVFGS 435
Query: 99 -GEVDLGSLQD-TVPTDRIVALQGGWGFLR-KGLSGEILLRLTYKAYVEDEEDDKTEEDS 155
G++ +G + D +RIV GG+ + + + + A ++D++DD ++D
Sbjct: 436 YGDIGMGGMTDWNEIVNRIVMKLGGYPEDEDEDEADDSKDNIDESAIIDDDDDDDDDDDD 495
Query: 156 IDIDVSDDELSDTEE 170
D D DD+ D ++
Sbjct: 496 DDDDDDDDDDDDDDD 510
>PVDG_PLAKN (P50494) Duffy receptor, gamma form precursor
(Erythrocyte binding protein)
Length = 1070
Score = 32.3 bits (72), Expect = 1.3
Identities = 28/117 (23%), Positives = 50/117 (41%), Gaps = 7/117 (5%)
Query: 144 EDEEDDKTEEDSIDIDVSD-DELSDTEEANVTDKTGVRESAYPTDKESFMDVLAAIIVSE 202
E +ED + + +I+V + D + ++ T R S T E + ++
Sbjct: 681 EPKEDGEKADPQKNIEVKGKQDTDDRSQGSLGPHTDERASLGETHMEKDTETTGGSTLTP 740
Query: 203 EFQGIVASETGFTKGLDNGSNTGSKA--SKSPVANAESIPPSADNS----EGSSGGS 253
E VAS+ G G N N G+ A + ++ES+ + DN+ E +GG+
Sbjct: 741 EQNVSVASDNGNVPGSGNKQNEGATALSGAESLESSESVHKTIDNTTHGLENKNGGN 797
>PRD2_HUMAN (Q13029) PR-domain zinc finger protein 2 (Retinoblastoma
protein-interacting zinc-finger protein) (MTE-binding
protein) (MTB-ZF) (GATA-3 binding protein G3B)
Length = 1719
Score = 32.3 bits (72), Expect = 1.3
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 144 EDEEDDKTEEDSIDIDVSDDELSD--TEEANVTDKTGVRESAYPTDKE 189
E+EE+++ E++ + D DDEL D EEA++ ++ V+E D++
Sbjct: 268 EEEEEEEEEDEEEEEDDDDDELEDEGEEEASMPNENSVKEPEIRCDEK 315
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)
Length = 706
Score = 32.3 bits (72), Expect = 1.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 144 EDEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESA 183
EDEEDD+ E+D D D +++ S+ E +T G + A
Sbjct: 189 EDEEDDEDEDDEEDDDEEEEDDSEEEVMEITTAKGKKTPA 228
Score = 30.4 bits (67), Expect = 5.0
Identities = 15/47 (31%), Positives = 24/47 (50%)
Query: 144 EDEEDDKTEEDSIDIDVSDDELSDTEEANVTDKTGVRESAYPTDKES 190
E+E++D +ED + D DD+ + EE V G R+ KE+
Sbjct: 245 EEEDEDDEDEDDEEEDDEDDDEEEEEEEPVKAAPGKRKKEMTKQKEA 291
>NASP_HUMAN (P49321) Nuclear autoantigenic sperm protein (NASP)
Length = 788
Score = 32.3 bits (72), Expect = 1.3
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 142 YVEDEEDDKTEEDSI--DIDVSDDELSDTEEANVTDKTGVRESAYPTDKES 190
+VE+EE +KTE++S+ + D D+E + V D G +E A T+ +S
Sbjct: 114 HVEEEEGEKTEDESLVENNDNIDEEAREELREQVYDAMGEKEEAKKTEDKS 164
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.310 0.131 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,186,671
Number of Sequences: 164201
Number of extensions: 1376672
Number of successful extensions: 6343
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 5578
Number of HSP's gapped (non-prelim): 454
length of query: 280
length of database: 59,974,054
effective HSP length: 109
effective length of query: 171
effective length of database: 42,076,145
effective search space: 7195020795
effective search space used: 7195020795
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)
Medicago: description of AC122726.12