BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122725.14 + phase: 0
(512 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13... 62 4e-09
Y307_MYCGE (P47549) Hypothetical lipoprotein MG307 precursor 37 0.093
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 35 0.35
RRPL_DUGBV (Q66431) RNA-directed RNA polymerase (EC 2.7.7.48) (L... 35 0.46
SNE2_HUMAN (Q8WXH0) Nesprin 2 (Nuclear envelope spectrin repeat ... 34 0.79
SC10_ARATH (Q8RVQ5) Exocyst complex component Sec10 34 0.79
MG15_MOUSE (P60762) Transcription factor-like protein MRG15 (MOR... 34 0.79
MG15_HUMAN (Q9UBU8) Transcription factor-like protein MRG15 (MOR... 34 0.79
CTR9_YEAST (P89105) CTR9 protein 34 1.0
PT09_YEAST (P32522) PET309 protein, mitochondrial precursor 33 1.8
TERT_YEAST (Q06163) Telomerase reverse transcriptase (EC 2.7.7.-... 33 2.3
PHS2_SOLTU (P53535) Alpha-1,4 glucan phosphorylase, L-2 isozyme,... 33 2.3
RL10_STRGR (P36257) 50S ribosomal protein L10 32 3.9
RECJ_METJA (Q58387) Single-stranded-DNA-specific exonuclease rec... 32 3.9
CHLB_CHLMO (P17652) Light-independent protochlorophyllide reduct... 32 3.9
BCAT_HUMAN (P54687) Branched-chain-amino-acid aminotransferase, ... 32 5.1
YNX4_YEAST (P53857) Hypothetical 47.8 kDa protein in SIN4-BNI4 i... 31 6.7
IMA4_MOUSE (O35343) Importin alpha-4 subunit (Karyopherin alpha-... 31 6.7
IMA4_HUMAN (O00629) Importin alpha-4 subunit (Karyopherin alpha-... 31 6.7
IKI3_YEAST (Q06706) IKI3 protein 31 6.7
>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
(Leucine-rich PPR-motif containing protein)
Length = 1273
Score = 62.0 bits (149), Expect = 4e-09
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 143 ALLHAYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELKVN 202
ALL Y+QN ++KM E + V Y R+++ Y + G +E K+ +K
Sbjct: 46 ALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK 105
Query: 203 TSPDV-VTFNLLLTACASENDVETAERVLLQLKKAKVDPDWVTYSTLTNLYIRNASVDDC 261
P F+ L+T A D+E AE +L ++ A ++P TY L N Y +D
Sbjct: 106 DLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID-- 163
Query: 262 LEKAASTLKEMEK 274
TL+++EK
Sbjct: 164 --HVKQTLEKVEK 174
Score = 49.3 bits (116), Expect = 2e-05
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 213 LLTACASENDVETAERVLLQLKKAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEM 272
LL E E A R+ L+K D Y+ L +Y++N + L +M
Sbjct: 12 LLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQN----EYKFSPTDFLAKM 67
Query: 273 EKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLVKLGDF 332
E+ + RV Y L++ + N+G+++ ++I G MK +++ + +++ + GD
Sbjct: 68 EEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDM 127
Query: 333 AGVENLYKEWESVSGTNDVRVSNLLLTSYVDQGQMEMAEIFCNQLVEKGVCLSYSSWELL 392
EN+ LL +Y ++G ++ + Q +EK +EL
Sbjct: 128 ENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK----QTLEK-----VEKFEL- 177
Query: 393 TRGYLKKKDVKKFLHYFGKA 412
+L +D+ + + F KA
Sbjct: 178 ---HLMDRDLLQIIFSFSKA 194
>Y307_MYCGE (P47549) Hypothetical lipoprotein MG307 precursor
Length = 1177
Score = 37.4 bits (85), Expect = 0.093
Identities = 32/150 (21%), Positives = 69/150 (45%), Gaps = 23/150 (15%)
Query: 122 NSAEKFFEDLPDKMRGQPTCTALLHAYVQNN--LTNKAEALMSKMSECGFLRSPVPYNRM 179
N +F L + +P + ++ + N+ LTN A ++ + + + +P+ + +
Sbjct: 712 NKVTEFVNQLKVTEKSKPNFSNIILVDINNDQSLTNSANWSLNALLDVTTV-NPLSFALL 770
Query: 180 MSLYISNGKLEKVPKLFEELKVNTSPDVVTFNLLLTACASENDVETAERVLLQLKKAKVD 239
+ + SN + EK KLFEE+K ++ +S +D ++ +V+
Sbjct: 771 KNAFTSNQQFEKAKKLFEEIKSKNGS---------SSTSSSSDADSLAKVISNYY----- 816
Query: 240 PDWVTYSTLTNLYI----RNASVDDCLEKA 265
++T+S LTN + N ++D+ +KA
Sbjct: 817 --YMTWSKLTNKAMYGNPNNGNIDELFKKA 844
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
Length = 1261
Score = 35.4 bits (80), Expect = 0.35
Identities = 32/119 (26%), Positives = 55/119 (45%), Gaps = 14/119 (11%)
Query: 195 LFEELKV-NTSPDVVTFNLLLTACASENDVETAERVLLQLKKAKVDPDWVTYSTLTNLYI 253
+FEE K N P V +N +L+ ++ ++K++ + P VTY T+ N
Sbjct: 913 IFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAAC 972
Query: 254 RNASVDDCLEKAASTLKEMEKRTSRETRVA-YSSLLSLHANMGNVDEVNRIWGKMKACF 311
R D+ L A EME + + + RVA Y++++ EV ++ + KA F
Sbjct: 973 RIG--DESL--AEKLFAEMENQPNYQPRVAPYNTMIQF--------EVQTMFNREKALF 1019
Score = 33.5 bits (75), Expect = 1.3
Identities = 35/194 (18%), Positives = 79/194 (40%), Gaps = 13/194 (6%)
Query: 163 KMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELK-----VNTSP-------DVVTF 210
K+ E P Y ++S+ N + + V ++FE K ++T +
Sbjct: 797 KLIETNKFLHPEVYPTLISVLSKNKRFDAVQRVFEHSKHLYRKISTKSLEKANWFMALIL 856
Query: 211 NLLLTACASENDVETAERVLLQLKKAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLK 270
+ ++ + + +++ +K P T++ L N R DD A + +
Sbjct: 857 DAMILSSSFARQFKSSNLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATT-ALNIFE 915
Query: 271 EMEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLVKLG 330
E ++ + + Y+++LS E +++ +MK + Y +I++ ++G
Sbjct: 916 ETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIG 975
Query: 331 DFAGVENLYKEWES 344
D + E L+ E E+
Sbjct: 976 DESLAEKLFAEMEN 989
>RRPL_DUGBV (Q66431) RNA-directed RNA polymerase (EC 2.7.7.48) (L
protein)
Length = 4036
Score = 35.0 bits (79), Expect = 0.46
Identities = 30/105 (28%), Positives = 54/105 (50%), Gaps = 5/105 (4%)
Query: 311 FCKMSDDEYVCMISSLVKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDQGQMEMA 370
F M +Y+ M+S + K+ D + VE ++E + T R+S L + V++ ++
Sbjct: 438 FDNMQLQDYLEMLSEMSKI-DNSDVEYTHREISDLH-TLVERLSKLQKSQDVNELKLWFK 495
Query: 371 EIFCNQLVEKGVCLSYSSWELLTRGYLKKKDVKKFLHYFGKAISS 415
E + ++ V +++E L Y KKKD+ KF+ GKA S+
Sbjct: 496 EEVLTKRSQRSVG---NAFEFLINDYFKKKDIMKFVSTSGKASST 537
>SNE2_HUMAN (Q8WXH0) Nesprin 2 (Nuclear envelope spectrin repeat
protein 2) (Syne-2) (Synaptic nuclear envelope protein
2) (Nucleus and actin connecting element protein)
(NUANCE protein)
Length = 6885
Score = 34.3 bits (77), Expect = 0.79
Identities = 43/208 (20%), Positives = 86/208 (40%), Gaps = 37/208 (17%)
Query: 76 IRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKM 135
I+ + + ++H L K+Q E VQ++++ + L + DL ++
Sbjct: 795 IQNISSQESFQHVLTTGLQAKIQ------EAKEKVQINVVKLIAALKNLTDVSPDLDIRL 848
Query: 136 RGQPTCTALLHAYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMMSLYISNGK-LEKVPK 194
+ + + L +Y+ +A+ L+ + G L S +L ISN K L K K
Sbjct: 849 KMEESQKEL-ESYMM-----RAQQLLGQRESPGELIS----KHKEALIISNTKSLAKYLK 898
Query: 195 LFEELKVNTSPDVVTFNLLLTACASENDVETAERVLLQLKKAKVDPDWVTYSTLTNLYIR 254
EELK N + D+ ++ L+ K V W + +LY++
Sbjct: 899 AVEELKNNVTEDI--------------------KMSLEEKSRDVCAKWESLHHELSLYVQ 938
Query: 255 NASVDDCLEKAASTLKEMEKRTSRETRV 282
+D K + + ++EK+ ++E ++
Sbjct: 939 QLKIDIEKGKLSDNILKLEKQINKEKKL 966
>SC10_ARATH (Q8RVQ5) Exocyst complex component Sec10
Length = 829
Score = 34.3 bits (77), Expect = 0.79
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 97 LQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQ--------PTCTALLHAY 148
+ +DI+LV GD+ Q RGL++ F+++ D +R + PT ++
Sbjct: 313 MNSDIRLVLGDHGSQPSPSNVARGLSA---LFKEITDTVRKEAATITAVFPTPNEVMAIL 369
Query: 149 VQNNLTNKAEALMSKMSECGFLRSPVPYNR---MMSLYISNGKLEKVPKLFEELKVNTSP 205
VQ L + ++ K+ L SP P ++ L + E+ +L ++L+
Sbjct: 370 VQRVLEQRVTGILDKILAKPSLMSPPPVQEGGLLLYLRMLAVAYERTQELAKDLRAVGCG 429
Query: 206 DVVTFNLLLTACASEND--VETAERVLLQLKKAKV-----DPDWVTYSTLTNLYIRNASV 258
D+ +L + +S D E L QL +AK+ + V+ S+ T + AS+
Sbjct: 430 DLDVEDLTESLFSSHKDEYPEHERASLKQLYQAKMEELRAESQQVSESSGTIGRSKGASI 489
Query: 259 DDCLEKAAST 268
L++ + T
Sbjct: 490 SSSLQQISVT 499
>MG15_MOUSE (P60762) Transcription factor-like protein MRG15
(MORF-related gene 15 protein) (Mortality factor 4-like
1)
Length = 323
Score = 34.3 bits (77), Expect = 0.79
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 397 LKKKDVKKFLHYFGKAISSVKQWIPDPRLVQEAFTVIQEQAHIEGAEQ 444
+K K VK F+HY G + +W+P+ R+++ T +Q+Q ++ A Q
Sbjct: 35 IKDKQVKYFIHYSGWN-KNWDEWVPESRVLKYVDTNLQKQRELQKANQ 81
>MG15_HUMAN (Q9UBU8) Transcription factor-like protein MRG15
(MORF-related gene 15 protein) (Mortality factor 4-like
1) (MSL3-1 protein) (HSPC008/HSPC061)
Length = 323
Score = 34.3 bits (77), Expect = 0.79
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 397 LKKKDVKKFLHYFGKAISSVKQWIPDPRLVQEAFTVIQEQAHIEGAEQ 444
+K K VK F+HY G + +W+P+ R+++ T +Q+Q ++ A Q
Sbjct: 35 IKDKQVKYFIHYSGWN-KNWDEWVPESRVLKYVDTNLQKQRELQKANQ 81
>CTR9_YEAST (P89105) CTR9 protein
Length = 1077
Score = 33.9 bits (76), Expect = 1.0
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 149 VQNNLTNKAEALMSKMSECGFLRSPVPY---NRMMSLYISNGKLEKVPKLFEELKVNTSP 205
+QN + L + E F++ +P N + + NG K LF++ K S
Sbjct: 474 LQNQYKTSLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQAKAKVSD 533
Query: 206 DVVTFNLLL----TACASENDVETAERVLLQLKKAKVDPDWVTYSTLTNLYIRNA 256
+ N+ L +ND E +E + Q+ + P ++ + + NLY++ A
Sbjct: 534 KDESVNITLEYNIARTNEKNDCEKSESIYSQV--TSLHPAYIA-ARIRNLYLKFA 585
>PT09_YEAST (P32522) PET309 protein, mitochondrial precursor
Length = 965
Score = 33.1 bits (74), Expect = 1.8
Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 5/194 (2%)
Query: 96 KLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTN 155
K ++++ +V D L ++ N + PD Q LL A+ + + +
Sbjct: 269 KCEHNLPIVSSDLTCILKTYCHMQKFNLVSSTYWKYPDAQHDQNQFDYLLVAHSRLHNWD 328
Query: 156 KAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEE-LKVNTSPDVVTFNLLL 214
+ + + G L S Y +M G+L+ V KL+ + L+ P LL
Sbjct: 329 ALQQQFNALFGIGKLPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVLQSLL 388
Query: 215 TACASENDVETAERVLLQLKKAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEMEK 274
A D KK + P T++ + +Y ++D L+ A LK + +
Sbjct: 389 YAHYKVGDFAACFSHFELFKKYDITPSTATHTIMLKVY---RGLND-LDGAFRILKRLSE 444
Query: 275 RTSRETRVAYSSLL 288
S E + +LL
Sbjct: 445 DPSVEITEGHFALL 458
>TERT_YEAST (Q06163) Telomerase reverse transcriptase (EC 2.7.7.-)
(Telomerase catalytic subunit)
Length = 884
Score = 32.7 bits (73), Expect = 2.3
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 25/144 (17%)
Query: 355 NLLLTSYVDQGQMEMAEIFCNQLVEKGVCLSYSSWELLTRGYLKKKDVKKFLHYFGKAIS 414
N L+T ++ E F LVE VC +++S+ L + K + + K + + I+
Sbjct: 401 NKLITPFI-------VEYFKTYLVENNVCRNHNSYTLSNFNHSKMRIIPKKSNNEFRIIA 453
Query: 415 SVKQWIPDPRLVQEAFTVIQE--QAHIEGAEQLLVILRNAGHVNTNIYNLFLKTYAAAGK 472
IP +E FT+ +E + I+ +++L LRN + F K Y+
Sbjct: 454 -----IPCRGADEEEFTIYKENHKNAIQPTQKILEYLRNKRPTS------FTKIYS---- 498
Query: 473 MPLVVAERMKKDNVQLDKETHRLL 496
P +A+R+K+ +L K+ + +L
Sbjct: 499 -PTQIADRIKEFKQRLLKKFNNVL 521
>PHS2_SOLTU (P53535) Alpha-1,4 glucan phosphorylase, L-2 isozyme,
chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase
L-2)
Length = 974
Score = 32.7 bits (73), Expect = 2.3
Identities = 27/111 (24%), Positives = 49/111 (43%), Gaps = 9/111 (8%)
Query: 317 DEYVCMISSLVKLGDFAGVENLYKEWESVSGTNDVRVSNLL--LTSYVDQG------QME 368
D+++ L +L FA E L EW G N +++ +L+ T YV Q++
Sbjct: 645 DDWLVNTEKLAELRKFADNEELQSEWRKAKGNNKMKIVSLIKEKTGYVVSPDAMFDVQIK 704
Query: 369 MAEIFCNQLVE-KGVCLSYSSWELLTRGYLKKKDVKKFLHYFGKAISSVKQ 418
+ QL+ G+ Y + ++ K+K V + + GKA ++ Q
Sbjct: 705 RIHEYKRQLLNIFGIVYRYKKMKEMSPEERKEKFVPRVCIFGGKAFATYVQ 755
>RL10_STRGR (P36257) 50S ribosomal protein L10
Length = 185
Score = 32.0 bits (71), Expect = 3.9
Identities = 20/67 (29%), Positives = 29/67 (42%)
Query: 109 AVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTNKAEALMSKMSECG 168
A+ D I K+ L S E L +G+ T A + + + AEAL +K E G
Sbjct: 114 ALSADEIKKLADLESREVLLSKLAGAFKGKQTQAAQVFQALPSKFVRTAEALRAKKEEQG 173
Query: 169 FLRSPVP 175
+P P
Sbjct: 174 GAGTPAP 180
>RECJ_METJA (Q58387) Single-stranded-DNA-specific exonuclease recJ
(EC 3.1.-.-)
Length = 469
Score = 32.0 bits (71), Expect = 3.9
Identities = 37/138 (26%), Positives = 63/138 (44%), Gaps = 13/138 (9%)
Query: 206 DVVTFNLLLTACASENDVETAERVLLQLKKAKVDPDWVTYSTLTNLYIRNASVDDCLEKA 265
D+ F+ + AC+ D ETA VL+ D D L+NL ++ + LE
Sbjct: 302 DLEEFSTCINACSRYGDYETALNVLMG------DRDKYYRKMLSNLRKHRNNLREALEHV 355
Query: 266 ASTLKEMEKRTSR--ETRVAYSSLLSLHANMG-NVDEVNRIWGKMKACFCKMSDDEYVCM 322
+ ++ ++K + ET S+++ + A M +++EV+ W MK F D+ +
Sbjct: 356 KNDVEIIQKDRFQYFETDKIMSNIVGIVAGMSYSIEEVD--W--MKPIFAITEDENGYKV 411
Query: 323 ISSLVKLGDFAGVENLYK 340
+ KL FA NL K
Sbjct: 412 SARCPKLLCFAEDVNLAK 429
>CHLB_CHLMO (P17652) Light-independent protochlorophyllide reductase
subunit B (EC 1.18.-.-) (LI-POR subunit B) (DPOR subunit
B)
Length = 563
Score = 32.0 bits (71), Expect = 3.9
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 122 NSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMMS 181
N K E+ PD + PTCT+ + N N+A MS+ S L + V + R+
Sbjct: 76 NITRKDNEESPDLIILTPTCTSSILQEDLQNFVNRAS--MSENSTSDVLLADVNHYRVNE 133
Query: 182 LYISNGKLEKVPKLFEELKVNT 203
L ++ LE++ + + E + +T
Sbjct: 134 LQAADRTLEQIVRFYLEKEKST 155
>BCAT_HUMAN (P54687) Branched-chain-amino-acid aminotransferase,
cytosolic (EC 2.6.1.42) (BCAT(c)) (ECA39 protein)
Length = 386
Score = 31.6 bits (70), Expect = 5.1
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 165 SECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELKVNTS---------PDVVTFNLLLT 215
SE G+ + + + +SL+ + L +LFE LK P++ + +
Sbjct: 64 SEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRS 123
Query: 216 ACASENDVETAERVLLQLKK-AKVDPDWVTYSTLTNLYIR 254
A + V E +L +++ K+D +WV YST +LYIR
Sbjct: 124 AVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIR 163
>YNX4_YEAST (P53857) Hypothetical 47.8 kDa protein in SIN4-BNI4
intergenic region
Length = 426
Score = 31.2 bits (69), Expect = 6.7
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 362 VDQGQMEMAEIFCNQLVEKGVCLSYSSWELLTRGYLKKKDVKKF--LHYFGKAISSVKQ 418
+D+G E F ++ + + L SW++L R YL K++K F L Y K I+S ++
Sbjct: 91 IDRGDSPNTEGFDFKVNARDLLLLRMSWDILLREYLTPKELKVFQALLYSNKHITSTER 149
>IMA4_MOUSE (O35343) Importin alpha-4 subunit (Karyopherin alpha-4
subunit) (Importin alpha Q1)
Length = 521
Score = 31.2 bits (69), Expect = 6.7
Identities = 23/65 (35%), Positives = 34/65 (51%), Gaps = 16/65 (24%)
Query: 56 INKWKEEGHTLPR-KYQLNRMIRELRKNKRYKHAL--------EVCEWMKLQNDIKLVEG 106
+ +K +G L + Q N ++ ELRKNKR +H L ++CE +DI +G
Sbjct: 12 LKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPQEDICE----DSDI---DG 64
Query: 107 DYAVQ 111
DY VQ
Sbjct: 65 DYRVQ 69
>IMA4_HUMAN (O00629) Importin alpha-4 subunit (Karyopherin alpha-4
subunit) (Qip1 protein)
Length = 521
Score = 31.2 bits (69), Expect = 6.7
Identities = 23/65 (35%), Positives = 34/65 (51%), Gaps = 16/65 (24%)
Query: 56 INKWKEEGHTLPR-KYQLNRMIRELRKNKRYKHAL--------EVCEWMKLQNDIKLVEG 106
+ +K +G L + Q N ++ ELRKNKR +H L ++CE +DI +G
Sbjct: 12 LKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPHEDICE----DSDI---DG 64
Query: 107 DYAVQ 111
DY VQ
Sbjct: 65 DYRVQ 69
>IKI3_YEAST (Q06706) IKI3 protein
Length = 1349
Score = 31.2 bits (69), Expect = 6.7
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 36/222 (16%)
Query: 39 GRRLLSLVYPKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKN---KRYKHALEVCEWM 95
G L+S++ K S V+ + L Y ++ E+RKN KRYK A VC
Sbjct: 714 GSILVSVIPSKSSVVLQATRGN-----LETIYPRIMVLAEVRKNIMAKRYKEAFIVCRTH 768
Query: 96 KLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTN 155
++ DI DYA +L + + E F + G+ L + + +
Sbjct: 769 RINLDIL---HDYAPEL-------FIENLEVFINQI-----GRVDYLNLFISCLSEDDVT 813
Query: 156 KA---EALMSKMSECGFLRSPVPYNRM---MSLYISNGKLEKVPKLFEE----LKVNTSP 205
K E L S +S+ F P P M M + + K KV K+ + L N
Sbjct: 814 KTKYKETLYSGISK-SFGMEPAPLTEMQIYMKKKMFDPKTSKVNKICDAVLNVLLSNPEY 872
Query: 206 DVVTFNLLLTACASEN--DVETAERVLLQLKKAKVDPDWVTY 245
++TA AS+N ++ A +++ +L+ ++ VTY
Sbjct: 873 KKKYLQTIITAYASQNPQNLSAALKLISELENSEEKDSCVTY 914
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.132 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,585,140
Number of Sequences: 164201
Number of extensions: 2267337
Number of successful extensions: 6230
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 6211
Number of HSP's gapped (non-prelim): 32
length of query: 512
length of database: 59,974,054
effective HSP length: 115
effective length of query: 397
effective length of database: 41,090,939
effective search space: 16313102783
effective search space used: 16313102783
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC122725.14