BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122724.2 + phase: 0
(255 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PUR_HUMAN (Q00577) Transcriptional activator protein PUR-alpha (... 42 0.002
ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger prote... 40 0.004
K2C1_MOUSE (P04104) Keratin, type II cytoskeletal 1 (Cytokeratin... 40 0.005
GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro... 40 0.007
LORI_MOUSE (P18165) Loricrin 39 0.009
K1CI_HUMAN (P35527) Keratin, type I cytoskeletal 9 (Cytokeratin ... 39 0.012
ZIC2_MOUSE (Q62520) Zinc finger protein ZIC 2 (Zinc finger prote... 39 0.016
GRP_DAUCA (Q03878) Glycine-rich RNA-binding protein 39 0.016
CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associate... 39 0.016
SSB1_STRAW (Q82FG5) Single-strand binding protein 1 (SSB 1) (Hel... 38 0.021
PUR_MOUSE (P42669) Transcriptional activator protein PUR-alpha (... 38 0.021
GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A 38 0.021
RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U... 38 0.027
RALY_HUMAN (Q9UKM9) RNA-binding protein Raly (hnRNP associated w... 38 0.027
PNT2_DROME (P51023) ETS-like protein pointed, isoform P2 (D-ETS-2) 38 0.027
PNT1_DROME (P51022) ETS-like protein pointed, isoform P1 (D-ETS-2) 38 0.027
K1CJ_BOVIN (P06394) Keratin, type I cytoskeletal VIB (Cytokerati... 38 0.027
GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment) 38 0.027
COA1_PAVPK (P52501) Coat protein VP1 [Contains: Coat protein VP2] 37 0.035
COA1_PAVP9 (P33484) Coat protein VP1 [Contains: Coat protein VP2] 37 0.035
>PUR_HUMAN (Q00577) Transcriptional activator protein PUR-alpha
(Purine-rich single-stranded DNA-binding protein alpha)
Length = 322
Score = 41.6 bits (96), Expect = 0.002
Identities = 19/37 (51%), Positives = 23/37 (61%)
Query: 127 GSGSKPPGGRGRGGGGGNSDGSEEGSTGGMSDETAQI 163
GSGS GG G GGGGG S G G+ GG+ ET ++
Sbjct: 25 GSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQEL 61
Score = 30.0 bits (66), Expect = 5.7
Identities = 15/36 (41%), Positives = 16/36 (43%)
Query: 120 QKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
Q G G GS G G G GGG G G +GG
Sbjct: 10 QGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGG 45
>ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger protein
of the cerebellum 2)
Length = 532
Score = 40.4 bits (93), Expect = 0.004
Identities = 19/36 (52%), Positives = 22/36 (60%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G SGG+G GG G GGGGG + G GS+GG S
Sbjct: 479 GSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGS 514
Score = 38.1 bits (87), Expect = 0.021
Identities = 18/36 (50%), Positives = 19/36 (52%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G SGG GG G GGGGG S G G+ GG S
Sbjct: 486 GGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHS 521
>K2C1_MOUSE (P04104) Keratin, type II cytoskeletal 1 (Cytokeratin 1)
(67 kDa cytokeratin)
Length = 627
Score = 40.0 bits (92), Expect = 0.005
Identities = 20/36 (55%), Positives = 22/36 (60%), Gaps = 2/36 (5%)
Query: 122 GEYSGGSGSKPPGGR--GRGGGGGNSDGSEEGSTGG 155
G Y GGSG G G GGGGG+S GS GS+GG
Sbjct: 560 GSYGGGSGGGSSGSHRGGSGGGGGSSGGSYGGSSGG 595
Score = 38.1 bits (87), Expect = 0.021
Identities = 17/34 (50%), Positives = 18/34 (52%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G Y G SG GG GG GG S GS G +GG
Sbjct: 547 GSYGGSSGGGGSGGSYGGGSGGGSSGSHRGGSGG 580
Score = 30.8 bits (68), Expect = 3.3
Identities = 19/36 (52%), Positives = 20/36 (54%), Gaps = 3/36 (8%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G Y GGSG GG GGGG S GS G +GG S
Sbjct: 538 GSYGGGSGGGSYGGSS--GGGG-SGGSYGGGSGGGS 570
Score = 29.3 bits (64), Expect = 9.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 121 KGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMSDETAQIVFATIGF 170
+G GG GS GG G GG GS G G S ++ + F + +
Sbjct: 575 RGGSGGGGGSS--GGSYGGSSGGGRGGSSSGGGGVKSSGSSTVKFVSTSY 622
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1
protein)
Length = 169
Score = 39.7 bits (91), Expect = 0.007
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 94 KGMMDNSEDSQRKSLEEAMKSLQEKIQKGEYSGGSGSKPPGGRGR-GGGGGNSDGSEEGS 152
K M D E+ K L+ + ++ E +G GG G GG R GGGGG S G G
Sbjct: 58 KAMRDAIEEMNGKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGY 117
Query: 153 TGG 155
+GG
Sbjct: 118 SGG 120
Score = 31.6 bits (70), Expect = 1.9
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 126 GGSGSKPPGGRGR--GGGGGNSDGSEEGSTGG 155
GG G + GG GR GGG G DG G GG
Sbjct: 136 GGGGGRGYGGGGRREGGGYGGGDGGSYGGGGG 167
Score = 31.2 bits (69), Expect = 2.5
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Query: 120 QKGEYSGGSGSKPPGGRGRGGGG----GNSDGSEEGSTGG 155
+ G Y G G GGRG GGGG G G + GS GG
Sbjct: 128 RSGGYGSGGGG---GGRGYGGGGRREGGGYGGGDGGSYGG 164
>LORI_MOUSE (P18165) Loricrin
Length = 486
Score = 39.3 bits (90), Expect = 0.009
Identities = 21/40 (52%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNS--DGSEEGSTGGMSDE 159
G YSGG GS GG G GGGG+S GS G GG S +
Sbjct: 235 GGYSGGGGSSCGGGGGYSGGGGSSCGGGSSGGGGGGSSQQ 274
Score = 37.4 bits (85), Expect = 0.035
Identities = 19/36 (52%), Positives = 20/36 (54%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G YSGG G GG GGGGG+S G S GG S
Sbjct: 103 GGYSGGGGGSSCGGGYSGGGGGSSCGGGSYSGGGSS 138
Score = 36.6 bits (83), Expect = 0.060
Identities = 19/36 (52%), Positives = 21/36 (57%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G YSGG GS GG GGGGG+S + S GG S
Sbjct: 249 GGYSGGGGSSCGGGSSGGGGGGSSQQYQCQSYGGGS 284
Score = 35.4 bits (80), Expect = 0.13
Identities = 18/36 (50%), Positives = 19/36 (52%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G YSGG G GG GGGGG+S G GG S
Sbjct: 90 GGYSGGGGGSSCGGGYSGGGGGSSCGGGYSGGGGGS 125
Score = 35.0 bits (79), Expect = 0.18
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 122 GEYSGGSGS---KPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G YSGG G GG G G GGG+S GS G GG S
Sbjct: 407 GGYSGGGGGCGGGSSGGSGGGCGGGSSGGSGGGCGGGYS 445
Score = 34.7 bits (78), Expect = 0.23
Identities = 20/36 (55%), Positives = 22/36 (60%), Gaps = 2/36 (5%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G SGGSG GG GGGGG+S G GS+GG S
Sbjct: 430 GGSSGGSGGGCGGGYSGGGGGGSSCGG--GSSGGGS 463
Score = 34.7 bits (78), Expect = 0.23
Identities = 20/36 (55%), Positives = 22/36 (60%), Gaps = 3/36 (8%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G+YSGG G GG G GGGG+S GS G GG S
Sbjct: 206 GKYSGGGGGSSCGG-GYSGGGGSSGGSSCG--GGYS 238
Score = 34.3 bits (77), Expect = 0.30
Identities = 17/35 (48%), Positives = 19/35 (53%)
Query: 123 EYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
+YSGG G GG GGGGG+S G GG S
Sbjct: 78 KYSGGGGGSSCGGGYSGGGGGSSCGGGYSGGGGGS 112
Score = 33.9 bits (76), Expect = 0.39
Identities = 20/42 (47%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 122 GEYSGGSGSKPPGGRGRGG------GGGNSDGSEEGSTGGMS 157
G YSGG GS GG GG GGG G GS GG S
Sbjct: 304 GGYSGGGGSSCGGGSSGGGSSCGGSGGGGYSGGGGGSCGGGS 345
Score = 33.5 bits (75), Expect = 0.51
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Query: 92 GGKGMMDNSEDSQRKSLEEAMKSLQEKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEG 151
GG G + + SQ + G SGG GS G G GGGGG G
Sbjct: 348 GGGGYYSSQQTSQTSCAPQQSYG-------GGSSGGGGSCGGGSSGGGGGGGCYSSGGGG 400
Query: 152 STGG 155
S+GG
Sbjct: 401 SSGG 404
Score = 33.5 bits (75), Expect = 0.51
Identities = 17/36 (47%), Positives = 19/36 (52%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G SGG G GG+ GGGGG+S G GG S
Sbjct: 193 GGSSGGCGGGSGGGKYSGGGGGSSCGGGYSGGGGSS 228
Score = 33.5 bits (75), Expect = 0.51
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 122 GEYSGGSGSKPPGGRGRG-----GGGGNSDGSEEGSTGG 155
G YSGG GS GG G GGG + GS G +GG
Sbjct: 292 GRYSGGGGSSCGGGYSGGGGSSCGGGSSGGGSSCGGSGG 330
Score = 33.1 bits (74), Expect = 0.67
Identities = 15/31 (48%), Positives = 16/31 (51%)
Query: 125 SGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
SGG GS G G GGGG G G +GG
Sbjct: 396 SGGGGSSGGCGGGYSGGGGGCGGGSSGGSGG 426
Score = 33.1 bits (74), Expect = 0.67
Identities = 18/35 (51%), Positives = 20/35 (56%), Gaps = 1/35 (2%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGM 156
G YSGG G GG G GGG+S G GS GG+
Sbjct: 116 GGYSGGGGGSSCGG-GSYSGGGSSCGGGGGSGGGV 149
Score = 32.3 bits (72), Expect = 1.1
Identities = 15/29 (51%), Positives = 16/29 (54%)
Query: 126 GGSGSKPPGGRGRGGGGGNSDGSEEGSTG 154
GG GS GG GGGGG+S G G G
Sbjct: 156 GGGGSSCGGGSSGGGGGGSSCGGGSGGGG 184
Score = 32.0 bits (71), Expect = 1.5
Identities = 19/44 (43%), Positives = 22/44 (49%), Gaps = 3/44 (6%)
Query: 122 GEYSGGSGSKPPGGRG-RGGGGGNSDGSEEGSTGG--MSDETAQ 162
G GGS GG G GGGGG+ G G GG S +T+Q
Sbjct: 317 GSSGGGSSCGGSGGGGYSGGGGGSCGGGSSGGGGGYYSSQQTSQ 360
Score = 32.0 bits (71), Expect = 1.5
Identities = 15/32 (46%), Positives = 16/32 (49%)
Query: 126 GGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
GG GS GG GGGG + G G GG S
Sbjct: 82 GGGGSSCGGGYSGGGGGSSCGGGYSGGGGGSS 113
Score = 32.0 bits (71), Expect = 1.5
Identities = 17/36 (47%), Positives = 17/36 (47%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G SGGSG GG G GGG G G GG S
Sbjct: 418 GGSSGGSGGGCGGGSSGGSGGGCGGGYSGGGGGGSS 453
Score = 31.6 bits (70), Expect = 1.9
Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 10/46 (21%)
Query: 122 GEYSGGSGSKPPGG--------RGRGGGGGNS--DGSEEGSTGGMS 157
G YSGG S GG G GGGGG+S GS G GG S
Sbjct: 130 GSYSGGGSSCGGGGGSGGGVKYSGGGGGGGSSCGGGSSGGGGGGSS 175
Score = 31.6 bits (70), Expect = 1.9
Identities = 17/35 (48%), Positives = 19/35 (53%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGM 156
G S G GS GG G GGG+S G GS GG+
Sbjct: 43 GGGSSGGGSSCGGGGGGSYGGGSSCGGGGGSGGGV 77
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/36 (52%), Positives = 20/36 (54%), Gaps = 1/36 (2%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G SGG G GG G G GGG+S GS G GG S
Sbjct: 399 GGSSGGCGGGYSGGGG-GCGGGSSGGSGGGCGGGSS 433
Score = 31.2 bits (69), Expect = 2.5
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 122 GEYSGGSGSKPPGGRGRGGGG----GNSDGSEEGSTGGMS 157
G SGG G G G GGGG G+S G G GG S
Sbjct: 164 GGSSGGGGGGSSCGGGSGGGGSYCGGSSGGGSSGGCGGGS 203
Score = 31.2 bits (69), Expect = 2.5
Identities = 18/37 (48%), Positives = 19/37 (50%), Gaps = 7/37 (18%)
Query: 126 GGSGSKPPGGRGRGG-------GGGNSDGSEEGSTGG 155
GG GS GG G GG GGG+S G GS GG
Sbjct: 170 GGGGSSCGGGSGGGGSYCGGSSGGGSSGGCGGGSGGG 206
Score = 31.2 bits (69), Expect = 2.5
Identities = 17/35 (48%), Positives = 18/35 (50%), Gaps = 1/35 (2%)
Query: 122 GEYSGGS-GSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G Y GGS G GG G G GGG G GS+ G
Sbjct: 184 GSYCGGSSGGGSSGGCGGGSGGGKYSGGGGGSSCG 218
Score = 30.8 bits (68), Expect = 3.3
Identities = 16/34 (47%), Positives = 17/34 (49%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G GG G GG G G GGG S G GS+ G
Sbjct: 422 GGSGGGCGGGSSGGSGGGCGGGYSGGGGGGSSCG 455
Score = 30.4 bits (67), Expect = 4.3
Identities = 18/41 (43%), Positives = 19/41 (45%), Gaps = 5/41 (12%)
Query: 122 GEYSGGSGSKPPGGRG-----RGGGGGNSDGSEEGSTGGMS 157
G Y GGS GG G GGGGG+S G GG S
Sbjct: 59 GSYGGGSSCGGGGGSGGGVKYSGGGGGSSCGGGYSGGGGGS 99
Score = 30.4 bits (67), Expect = 4.3
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Query: 122 GEYSGGS----GSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G YSGG G GG GGGGG S G GG
Sbjct: 33 GYYSGGGSGCGGGSSGGGSSCGGGGGGSYGGGSSCGGG 70
Score = 30.4 bits (67), Expect = 4.3
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 10/46 (21%)
Query: 122 GEYSGGSGSKPP----------GGRGRGGGGGNSDGSEEGSTGGMS 157
G YSGG GS GG GGGGG S G GG S
Sbjct: 219 GGYSGGGGSSGGSSCGGGYSGGGGSSCGGGGGYSGGGGSSCGGGSS 264
Score = 30.4 bits (67), Expect = 4.3
Identities = 17/36 (47%), Positives = 18/36 (49%), Gaps = 5/36 (13%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G+ SGG G G G GGGGG G G GG S
Sbjct: 17 GKTSGGGG-----GGGGGGGGGYYSGGGSGCGGGSS 47
Score = 29.6 bits (65), Expect = 7.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 117 EKIQKGEYSGGS-GSKPPGGRGRGGGGGNSDGSEEGSTG 154
++ Q Y GGS G GGR GGGG + G G G
Sbjct: 273 QQYQCQSYGGGSSGGSSCGGRYSGGGGSSCGGGYSGGGG 311
Score = 29.6 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 16/32 (49%)
Query: 126 GGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
GG G GG GGGGG+ G + GG S
Sbjct: 55 GGGGGSYGGGSSCGGGGGSGGGVKYSGGGGGS 86
Score = 29.6 bits (65), Expect = 7.4
Identities = 15/34 (44%), Positives = 17/34 (49%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G S G GS GG GGGGG+ G + GG
Sbjct: 123 GGSSCGGGSYSGGGSSCGGGGGSGGGVKYSGGGG 156
Score = 29.3 bits (64), Expect = 9.7
Identities = 15/34 (44%), Positives = 16/34 (46%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G GG G GG GGGG S G + S GG
Sbjct: 50 GSSCGGGGGGSYGGGSSCGGGGGSGGGVKYSGGG 83
>K1CI_HUMAN (P35527) Keratin, type I cytoskeletal 9 (Cytokeratin 9)
(K9) (CK 9)
Length = 622
Score = 38.9 bits (89), Expect = 0.012
Identities = 18/34 (52%), Positives = 19/34 (54%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G +SGGSG GG G GGG G G GS GG
Sbjct: 547 GGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGG 580
Score = 38.1 bits (87), Expect = 0.021
Identities = 20/36 (55%), Positives = 22/36 (60%), Gaps = 2/36 (5%)
Query: 122 GEYSGGSGSK--PPGGRGRGGGGGNSDGSEEGSTGG 155
G Y GGSGS GG G G GGG+S GS G +GG
Sbjct: 517 GSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGG 552
Score = 35.8 bits (81), Expect = 0.10
Identities = 20/36 (55%), Positives = 21/36 (57%), Gaps = 1/36 (2%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G Y GGSGS G G GGG G+ GS GS GG S
Sbjct: 555 GNYGGGSGSGGGSGGGYGGGSGSRGGS-GGSHGGGS 589
Score = 35.8 bits (81), Expect = 0.10
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G Y GGSGS+ G GGG G+ GS G GG
Sbjct: 503 GGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGG 536
Score = 35.8 bits (81), Expect = 0.10
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMSDETA 161
G Y GGSGS+ GG G GGG+ G E G + G +E +
Sbjct: 569 GGYGGGSGSR--GGSGGSHGGGSGFGGESGGSYGGGEEAS 606
Score = 33.9 bits (76), Expect = 0.39
Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 122 GEYSGGSGSKPPGGRGRG--GGGGNSDGSEEGSTGG 155
G Y GGSG GG G G GG G + G GS GG
Sbjct: 531 GGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGG 566
Score = 32.7 bits (73), Expect = 0.87
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 122 GEYSGGSGSKPPGGRG--RGGGGGNSDGSEEGSTGG 155
G +SGGSG GG G GGG G+ GS G GG
Sbjct: 539 GGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGG 574
Score = 32.7 bits (73), Expect = 0.87
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 122 GEYSGG-SGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G Y GG SG GG G GG G S G GS GG
Sbjct: 494 GSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGG 528
Score = 31.6 bits (70), Expect = 1.9
Identities = 18/38 (47%), Positives = 19/38 (49%), Gaps = 1/38 (2%)
Query: 121 KGEYSGGSGSKPPGGRGRG-GGGGNSDGSEEGSTGGMS 157
+G G GS GG G G GGG S G GS GG S
Sbjct: 486 RGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGS 523
Score = 30.0 bits (66), Expect = 5.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 126 GGSGSKPPGGRGRGG-GGGNSDGSEEGSTGG 155
GGSG GG G GG GG+ G EE S G
Sbjct: 579 GGSGGSHGGGSGFGGESGGSYGGGEEASGSG 609
>ZIC2_MOUSE (Q62520) Zinc finger protein ZIC 2 (Zinc finger protein
of the cerebellum 2)
Length = 530
Score = 38.5 bits (88), Expect = 0.016
Identities = 21/46 (45%), Positives = 24/46 (51%), Gaps = 7/46 (15%)
Query: 119 IQKGEYSGGSGS-------KPPGGRGRGGGGGNSDGSEEGSTGGMS 157
+ +G SG SGS GG G GGGGG S G G+TGG S
Sbjct: 474 VHRGAGSGSSGSGGGSAAGSGGGGGGAGGGGGGSSGGGSGTTGGHS 519
>GRP_DAUCA (Q03878) Glycine-rich RNA-binding protein
Length = 157
Score = 38.5 bits (88), Expect = 0.016
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 94 KGMMDNSEDSQRKSLEEAMKSLQEKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGST 153
K M D E + L+ ++ E +G SGG G + GG G GGGG G EG
Sbjct: 58 KSMRDAIEGMNGQELDGRNITVNEAQSRG--SGGGGGRREGGGGGYGGGGGYGGRREGGG 115
Query: 154 GG 155
GG
Sbjct: 116 GG 117
Score = 35.8 bits (81), Expect = 0.10
Identities = 18/34 (52%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G Y GG G GGR GGGGG G EG GG
Sbjct: 99 GGYGGGGGY---GGRREGGGGGGYGGRREGGGGG 129
Score = 33.9 bits (76), Expect = 0.39
Identities = 16/34 (47%), Positives = 17/34 (49%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G G G + GG G GGGGG G EG GG
Sbjct: 114 GGGGGYGGRREGGGGGYGGGGGGYGGRREGGDGG 147
>CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associated
RNA-binding fly homolog) (P19)
Length = 399
Score = 38.5 bits (88), Expect = 0.016
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 118 KIQKGEYSGGSGSKPPGGRGRGGGGGNSD-GSEEGSTGG 155
K KG+ G SG GG G GGGGG D G++ GS GG
Sbjct: 299 KTPKGDDEGSSGGGGGGGYGGGGGGGGYDRGNDRGSGGG 337
Score = 37.4 bits (85), Expect = 0.035
Identities = 19/44 (43%), Positives = 22/44 (49%), Gaps = 3/44 (6%)
Query: 120 QKGEYSGGSGSKPPGGRGRGGGGG---NSDGSEEGSTGGMSDET 160
Q G Y GSG + GG G GGGGG N G GG S ++
Sbjct: 44 QGGGYDSGSGHRGSGGSGNGGGGGGSWNDRGGNSYGNGGASKDS 87
Score = 32.0 bits (71), Expect = 1.5
Identities = 14/30 (46%), Positives = 16/30 (52%)
Query: 126 GGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
GG G + GG G GGGGG + G GG
Sbjct: 224 GGFGGRRGGGGGGGGGGGGGGRFDRGGGGG 253
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 99 NSEDSQRKSLEEAMKSLQEKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMSD 158
+ D +++ ++ Q KG GG G G GR GGGG G G GG D
Sbjct: 190 DGRDFNGNAIKVSLAQRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGGG--GGGGGRFD 247
Score = 30.8 bits (68), Expect = 3.3
Identities = 13/30 (43%), Positives = 15/30 (49%)
Query: 121 KGEYSGGSGSKPPGGRGRGGGGGNSDGSEE 150
K Y+ G G GG G GGGGG G +
Sbjct: 85 KDSYNKGHGGYSGGGGGGGGGGGGGSGGND 114
Score = 30.4 bits (67), Expect = 4.3
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 120 QKGEYSGGSGSKPPGGR---GRGGGGGNSDGSEEGSTGG 155
++G GG G GGR G GGGGG D G GG
Sbjct: 229 RRGGGGGGGGGGGGGGRFDRGGGGGGGRYDRGGGGGGGG 267
Score = 30.4 bits (67), Expect = 4.3
Identities = 18/43 (41%), Positives = 22/43 (50%), Gaps = 4/43 (9%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGS--TGGMSDETAQ 162
G YSGG G GG G GG GGN ++E + GM T +
Sbjct: 93 GGYSGGGGG--GGGGGGGGSGGNDMITQEDTIFVSGMDPSTTE 133
Score = 30.4 bits (67), Expect = 4.3
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGN-SDGSEEGSTGGM 156
G YS + + G GRGGGGGN DG + GGM
Sbjct: 359 GGYSRFNDNNGGGRGGRGGGGGNRRDGGPMRNDGGM 394
>SSB1_STRAW (Q82FG5) Single-strand binding protein 1 (SSB 1)
(Helix-destabilizing protein 1)
Length = 202
Score = 38.1 bits (87), Expect = 0.021
Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 20/60 (33%)
Query: 120 QKGEYSGGSGSKPPGGR--------------------GRGGGGGNSDGSEEGSTGGMSDE 159
Q G + GGSG P GG G GG GG+S GS GS GG SDE
Sbjct: 140 QGGGWGGGSGGAPQGGGAPADDPWATGTPAGGNQGGGGGGGWGGSSGGSSGGSGGGYSDE 199
Score = 30.0 bits (66), Expect = 5.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 111 AMKSLQEKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
++K+ K+ K +G SG GG G GGGGG G G +GG
Sbjct: 109 SLKNATAKVTKT--TGRSGQGGQGGYG-GGGGGQQGGGWGGGSGG 150
>PUR_MOUSE (P42669) Transcriptional activator protein PUR-alpha
(Purine-rich single-stranded DNA-binding protein alpha)
Length = 321
Score = 38.1 bits (87), Expect = 0.021
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMSDETAQI 163
G GSGS GG G GGGGG G G+ GG+ ET ++
Sbjct: 22 GHPGSGSGS---GGGGGGGGGGGGSGGGGGAPGGLQHETQEL 60
Score = 30.0 bits (66), Expect = 5.7
Identities = 15/36 (41%), Positives = 16/36 (43%)
Query: 120 QKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
Q G G GS G G G GGG G G +GG
Sbjct: 10 QGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGG 45
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A
Length = 166
Score = 38.1 bits (87), Expect = 0.021
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 120 QKGEYSGGSG--SKPPGGRGRGGGGGNSDGSEEGSTGG 155
++G YSGG G S GG G GGGG DG E G GG
Sbjct: 122 REGGYSGGGGGYSSRGGGGGGYGGGGRRDGGEGGGYGG 159
Score = 33.9 bits (76), Expect = 0.39
Identities = 23/70 (32%), Positives = 29/70 (40%), Gaps = 8/70 (11%)
Query: 94 KGMMDNSEDSQRKSLEEAMKSLQEKIQKGEYSGGSG--------SKPPGGRGRGGGGGNS 145
K M D E + L+ ++ E +G GG G S GG G GGGG
Sbjct: 60 KSMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGG 119
Query: 146 DGSEEGSTGG 155
G E G +GG
Sbjct: 120 GGREGGYSGG 129
Score = 30.4 bits (67), Expect = 4.3
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G Y GG G GGR G GG S G GG
Sbjct: 108 GGYGGGGGGYGGGGREGGYSGGGGGYSSRGGGGG 141
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1
SNRNP 70 kDa) (snRNP70) (Fragment)
Length = 378
Score = 37.7 bits (86), Expect = 0.027
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 98 DNSEDSQRKSLEEAMKSLQEKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTG 154
D D +R+S ++ +E+ +K E GG G GG G GGGG D +E G
Sbjct: 213 DKDRDRKRRSSRSRERARRERERKEELRGGGG----GGGGGSGGGGGGDMAEPSEAG 265
>RALY_HUMAN (Q9UKM9) RNA-binding protein Raly (hnRNP associated with
lethal yellow homolog) (Autoantigen p542)
Length = 306
Score = 37.7 bits (86), Expect = 0.027
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 56 VRQSATTAPVLKVYPSNLTQSVPVLKSQKPRHVCLAGGKGMMDNSED-------SQRKSL 108
V++ T P+++ +N VPV + V + K + +SE +Q KS
Sbjct: 145 VKRPRVTVPLVRRVKTN----VPVKLFARSTAVTTSSAKIKLKSSELQAIKTELTQIKSN 200
Query: 109 EEAMKSLQEKIQKGEYSGGSGSKPP--GGRGRGGGGGNSDGSEEGSTGG 155
+A+ S E+I + + G K GG G GGGGG S G G GG
Sbjct: 201 IDALLSRLEQIAAEQKANPDGKKKGDGGGAGGGGGGGGSGGGGSGGGGG 249
>PNT2_DROME (P51023) ETS-like protein pointed, isoform P2 (D-ETS-2)
Length = 718
Score = 37.7 bits (86), Expect = 0.027
Identities = 16/23 (69%), Positives = 16/23 (69%)
Query: 124 YSGGSGSKPPGGRGRGGGGGNSD 146
Y GGSGS P GGR GGGG SD
Sbjct: 466 YGGGSGSGPTGGRSSGGGGDESD 488
>PNT1_DROME (P51022) ETS-like protein pointed, isoform P1 (D-ETS-2)
Length = 623
Score = 37.7 bits (86), Expect = 0.027
Identities = 16/23 (69%), Positives = 16/23 (69%)
Query: 124 YSGGSGSKPPGGRGRGGGGGNSD 146
Y GGSGS P GGR GGGG SD
Sbjct: 371 YGGGSGSGPTGGRSSGGGGDESD 393
>K1CJ_BOVIN (P06394) Keratin, type I cytoskeletal VIB (Cytokeratin
VIB)
Length = 526
Score = 37.7 bits (86), Expect = 0.027
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 50 SSGLYCVRQSATTAPVLKVYPSNLTQSVPVLKSQKPRHVCLAGGKGMMDNSEDSQRKSLE 109
+ G YCV+ S + + + L Q + Q + L K ++N + R LE
Sbjct: 377 TEGRYCVQLSQIQSQISSL-EEQLQQIRAETECQNAEYQQLLDIKIRLENEIQTYRSLLE 435
Query: 110 EAMKSLQEKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
S G Y GG G GG GGGGG GS G GG S
Sbjct: 436 GEGSS-----GGGSYGGGRGY---GGSSGGGGGGYGGGSSSGGYGGGS 475
Score = 30.4 bits (67), Expect = 4.3
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G SGG G G G GG G S G S GG
Sbjct: 465 GSSSGGYGGGSSSGGGHGGSSGGSYGGGSSSGGG 498
Score = 29.6 bits (65), Expect = 7.4
Identities = 19/36 (52%), Positives = 20/36 (54%), Gaps = 2/36 (5%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G Y GGS S GG G GGG+ GS GS GG S
Sbjct: 460 GGYGGGSSSGGYGG-GSSSGGGHG-GSSGGSYGGGS 493
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)
Length = 142
Score = 37.7 bits (86), Expect = 0.027
Identities = 22/62 (35%), Positives = 27/62 (43%)
Query: 94 KGMMDNSEDSQRKSLEEAMKSLQEKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGST 153
+ M E K L+ ++ E +G GG G GGRG GGG G DG G
Sbjct: 39 EAMRSAIEGMNGKELDGRNITVNEAQSRGGRGGGGGGGYGGGRGGGGGYGRRDGGGGGYG 98
Query: 154 GG 155
GG
Sbjct: 99 GG 100
Score = 33.5 bits (75), Expect = 0.51
Identities = 22/56 (39%), Positives = 27/56 (47%), Gaps = 4/56 (7%)
Query: 107 SLEEAMKSLQEKIQKGEYSGGS----GSKPPGGRGRGGGGGNSDGSEEGSTGGMSD 158
S EEAM+S E + E G + ++ GGRG GGGGG G G G D
Sbjct: 36 STEEAMRSAIEGMNGKELDGRNITVNEAQSRGGRGGGGGGGYGGGRGGGGGYGRRD 91
Score = 32.7 bits (73), Expect = 0.87
Identities = 15/30 (50%), Positives = 16/30 (53%)
Query: 126 GGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
GG G + GG G GGGGG G G GG
Sbjct: 85 GGYGRRDGGGGGYGGGGGGYGGGRGGYGGG 114
Score = 32.3 bits (72), Expect = 1.1
Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGS 148
G Y GG G G RG GGG GNSDG+
Sbjct: 114 GGYGGGGGGYGGGSRG-GGGYGNSDGN 139
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTG-GMSD 158
G Y GG G GG G GGGGG G G G G SD
Sbjct: 102 GGYGGGRGGY--GGGGYGGGGGGYGGGSRGGGGYGNSD 137
Score = 30.4 bits (67), Expect = 4.3
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGG 155
G GG G GG G GGG G G G GG
Sbjct: 88 GRRDGGGGGYGGGGGGYGGGRGGYGGGGYGGGGG 121
Score = 29.6 bits (65), Expect = 7.4
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 122 GEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMS 157
G Y GG G G GRGG GG G G GG S
Sbjct: 95 GGYGGGGGGY---GGGRGGYGGGGYGGGGGGYGGGS 127
>COA1_PAVPK (P52501) Coat protein VP1 [Contains: Coat protein VP2]
Length = 729
Score = 37.4 bits (85), Expect = 0.035
Identities = 29/104 (27%), Positives = 46/104 (43%), Gaps = 5/104 (4%)
Query: 59 SATTA--PVLKVYPSNLTQSVPVLKSQKPRHVCLAGGKGMMDNSEDSQRKSLEEAMKSLQ 116
S TT+ P ++ P S P K PRH+ + K + ++ S+ E ++
Sbjct: 100 SPTTSQQPEVRRSPRKHPGSKPPGKRPAPRHIFINLAKKKAKGTSNTNSNSMSENVEQ-H 158
Query: 117 EKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMSDET 160
I G +G++ G G GGGGG G STG +++T
Sbjct: 159 NPINAGTELSATGNE--SGGGGGGGGGRGAGGVGVSTGSFNNQT 200
>COA1_PAVP9 (P33484) Coat protein VP1 [Contains: Coat protein VP2]
Length = 729
Score = 37.4 bits (85), Expect = 0.035
Identities = 29/104 (27%), Positives = 46/104 (43%), Gaps = 5/104 (4%)
Query: 59 SATTA--PVLKVYPSNLTQSVPVLKSQKPRHVCLAGGKGMMDNSEDSQRKSLEEAMKSLQ 116
S TT+ P ++ P S P K PRH+ + K + ++ S+ E ++
Sbjct: 100 SPTTSQQPEVRRSPRKHPGSKPPGKRPAPRHIFINLAKKKAKGTSNTNSNSMSENVEQ-H 158
Query: 117 EKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMSDET 160
I G +G++ G G GGGGG G STG +++T
Sbjct: 159 NPINAGTELSATGNE--SGGGGGGGGGRGAGGVGVSTGSFNNQT 200
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,105,319
Number of Sequences: 164201
Number of extensions: 1453242
Number of successful extensions: 19237
Number of sequences better than 10.0: 467
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 184
Number of HSP's that attempted gapping in prelim test: 8924
Number of HSP's gapped (non-prelim): 6146
length of query: 255
length of database: 59,974,054
effective HSP length: 108
effective length of query: 147
effective length of database: 42,240,346
effective search space: 6209330862
effective search space used: 6209330862
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Medicago: description of AC122724.2