BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122722.4 + phase: 0
(307 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OT1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3) 37 0.047
NKCR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer... 37 0.080
WHI3_YEAST (P34761) WHI3 protein 35 0.23
GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4) (Endo... 35 0.23
YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 34 0.52
VIT1_FUNHE (Q90508) Vitellogenin I precursor (VTG I) [Contains: ... 34 0.52
CYAA_YEAST (P08678) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophos... 34 0.52
RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subun... 33 0.68
STL4_RAT (Q8VHQ7) Synaptotagmin-like protein 4 (Exophilin 2) (Gr... 33 0.89
RBS1_MOUSE (Q91W59) RNA binding motif, single-stranded interacti... 33 0.89
RBS1_HUMAN (P29558) RNA binding motif, single-stranded interacti... 33 0.89
YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 in ... 33 1.2
VIT2_CHICK (P02845) Vitellogenin II precursor (Major vitellogeni... 33 1.2
DDX3_HUMAN (O00571) DEAD-box protein 3 (Helicase-like protein 2)... 33 1.2
NKCR_MOUSE (P30415) NK-tumor recognition protein (Natural-killer... 32 1.5
BRD1_SCHPO (Q09948) Bromodomain protein brd1 32 1.5
SSK2_YEAST (P53599) MAP kinase kinase kinase SSK2 (EC 2.7.1.-) (... 32 2.0
SR40_YEAST (P32583) Suppressor protein SRP40 32 2.0
FMT_LACPL (Q88WL3) Methionyl-tRNA formyltransferase (EC 2.1.2.9) 32 2.0
CYAA_PODAN (Q01513) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophos... 32 2.0
>OT1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3)
Length = 338
Score = 37.4 bits (85), Expect = 0.047
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 14 PSSPRSQKQTPYYVQS--PSRESSHDGDKSSTMQPSPMDSPSHQS-YGHHSRASSSSRIS 70
PS P Q P Y Q S +S+ G +PM +H + HHS+ S+++ +S
Sbjct: 210 PSYPMPYNQAPSYAQGYPTSNAASYFGGMDCGSYLAPMTGHAHHHPHAHHSQLSTAAAVS 269
Query: 71 GGYNSSFLGRKVNRKVNDKGWIGS 94
G ++ +G+ + +G+ G+
Sbjct: 270 GHHHPHHIGQSSGHHPHHQGYGGT 293
>NKCR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer
cells cyclophilin-related protein) (NK-TR protein)
Length = 1462
Score = 36.6 bits (83), Expect = 0.080
Identities = 27/78 (34%), Positives = 36/78 (45%), Gaps = 11/78 (14%)
Query: 4 KTDSDVTSFDPSS-PRSQKQTPYYVQSPSRESSHDGD----------KSSTMQPSPMDSP 52
++ S +S+DP S RS YY +S SR S D +S + + DS
Sbjct: 1385 RSRSRSSSYDPHSRSRSYTYDSYYSRSRSRSRSQRSDSYHRGRSYNRRSRSCRSYGSDSE 1444
Query: 53 SHQSYGHHSRASSSSRIS 70
S +SY HH S SSR S
Sbjct: 1445 SDRSYSHHRSPSESSRYS 1462
Score = 34.7 bits (78), Expect = 0.31
Identities = 26/67 (38%), Positives = 31/67 (45%), Gaps = 2/67 (2%)
Query: 4 KTDSDVTSFDPSSPRSQKQTPYYVQSPSRESSHD--GDKSSTMQPSPMDSPSHQSYGHHS 61
K+D DV S S R ++ + QS SR SS KSS+ S S S GH
Sbjct: 502 KSDKDVQSSLTHSSRDSYRSKSHSQSYSRGSSRSRTASKSSSHSRSRSKSRSSSKSGHRK 561
Query: 62 RASSSSR 68
RAS S R
Sbjct: 562 RASKSPR 568
>WHI3_YEAST (P34761) WHI3 protein
Length = 661
Score = 35.0 bits (79), Expect = 0.23
Identities = 28/104 (26%), Positives = 42/104 (39%), Gaps = 14/104 (13%)
Query: 12 FDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPS--------PMDSPS-----HQSYG 58
F SP SQ+Q+ Q P + H K S Q + P+ S H ++
Sbjct: 239 FSNDSPLSQQQSQQQQQQPQQPQQHSTQKHSPQQCNQQQVNSSIPLSSQGQVIGLHSNHS 298
Query: 59 HHSRASSSSRISGGYNSSFLGRKVNRKVNDKGWIGSKVIEEENG 102
H + S+ + SFL R N ++N+K W S + NG
Sbjct: 299 HQDLSVESTIQTSDIGKSFLLRD-NTEINEKIWGTSGIPSSING 341
>GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4)
(Endo-1,4-beta-glucanase) (Cellulase) (EGA)
Length = 962
Score = 35.0 bits (79), Expect = 0.23
Identities = 27/76 (35%), Positives = 33/76 (42%), Gaps = 2/76 (2%)
Query: 6 DSDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDS--PSHQSYGHHSRA 63
D T SS S + V S S S SS++QPS S PS S A
Sbjct: 600 DFAATQGGSSSSSSSSSSSVPVSSSSSSSIIPSSSSSSIQPSSSSSSMPSSSSSSSSVVA 659
Query: 64 SSSSRISGGYNSSFLG 79
SSSS +SGG ++ G
Sbjct: 660 SSSSSVSGGLRCNWYG 675
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor
Length = 374
Score = 33.9 bits (76), Expect = 0.52
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 7 SDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSS 66
S +S SSP S T SPS SS SS+ S S S S S +SSS
Sbjct: 134 STTSSSSSSSPSSSSTTT--TTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 191
Query: 67 SRISGGYNSS 76
S S +SS
Sbjct: 192 SSSSSSSSSS 201
>VIT1_FUNHE (Q90508) Vitellogenin I precursor (VTG I) [Contains:
Lipovitellin 1 (LV1); Phosvitin (PV); Lipovitellin 2
(LV2)]
Length = 1704
Score = 33.9 bits (76), Expect = 0.52
Identities = 25/74 (33%), Positives = 33/74 (43%)
Query: 10 TSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSSSRI 69
+S SS RS ++ ++ S SS S+ S S S S SR SSSS
Sbjct: 1101 SSSSSSSSRSSRKIDLAARTNSSSSSSSRRSRSSSSSSSSSSSSSSSSSSSSRRSSSSSS 1160
Query: 70 SGGYNSSFLGRKVN 83
S +SS R+VN
Sbjct: 1161 SSSSSSSRSSRRVN 1174
>CYAA_YEAST (P08678) Adenylate cyclase (EC 4.6.1.1) (ATP
pyrophosphate-lyase) (Adenylyl cyclase)
Length = 2026
Score = 33.9 bits (76), Expect = 0.52
Identities = 24/61 (39%), Positives = 33/61 (53%), Gaps = 5/61 (8%)
Query: 20 QKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQ-SYGHHSRASSSSRISGG-YNSSF 77
+K+T +S SR SS D D+ M P P PS + S HH R + S ++ G NSSF
Sbjct: 472 RKKTKPKGRSKSRRSSIDADELDPMSPGP---PSKKDSRHHHDRKDNESMVTAGDSNSSF 528
Query: 78 L 78
+
Sbjct: 529 V 529
>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6)
Length = 1852
Score = 33.5 bits (75), Expect = 0.68
Identities = 21/57 (36%), Positives = 27/57 (46%), Gaps = 3/57 (5%)
Query: 11 SFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSSS 67
S+ PSSP+ +P Y SPS + S T SP SPS +Y S + S S
Sbjct: 1791 SYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPT---SPTYSPSSPTYSPASPSYSPS 1844
Score = 30.8 bits (68), Expect = 4.4
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 11 SFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYG----HHSRASSS 66
S+ PSSP +P Y S R S S T SP SP+ +Y +S S S
Sbjct: 1653 SYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPT---SPTYSPTSPTYSPTSPTYSPTSPS 1709
Query: 67 SRISGGYNSS 76
GGY+ S
Sbjct: 1710 YESGGGYSPS 1719
>STL4_RAT (Q8VHQ7) Synaptotagmin-like protein 4 (Exophilin 2)
(Granuphilin)
Length = 672
Score = 33.1 bits (74), Expect = 0.89
Identities = 23/87 (26%), Positives = 43/87 (48%), Gaps = 8/87 (9%)
Query: 215 LKKYHQQRKSRRTV----SVNIQGSKVPLYGAGADVASSVDNGKISLTLVFEVKSRGNVV 270
L K H+Q+ +R ++ S++ GS + LY D + GKI+ +L FE K++ V
Sbjct: 317 LVKLHRQKLARGSMQSGSSMSTIGSMMSLYSEAGDFGNVSVTGKIAFSLKFEQKTQTLV- 375
Query: 271 GKLVRTKHTQRVSCSIAVDPHNNKYIK 297
+ K +++ + +N Y+K
Sbjct: 376 ---IHVKECHQLAYADEAKKRSNPYVK 399
>RBS1_MOUSE (Q91W59) RNA binding motif, single-stranded interacting
protein 1 (Single-stranded DNA-binding protein MSSP-1)
Length = 403
Score = 33.1 bits (74), Expect = 0.89
Identities = 17/61 (27%), Positives = 30/61 (48%)
Query: 7 SDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSS 66
S V+++ SP + PY +Q P + + + ++QP+ M SP Q H S S+
Sbjct: 291 SPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTG 350
Query: 67 S 67
+
Sbjct: 351 T 351
>RBS1_HUMAN (P29558) RNA binding motif, single-stranded interacting
protein 1 (Single-stranded DNA-binding protein MSSP-1)
(Suppressor of CDC2 with RNA binding motif 2)
Length = 406
Score = 33.1 bits (74), Expect = 0.89
Identities = 17/61 (27%), Positives = 30/61 (48%)
Query: 7 SDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSS 66
S V+++ SP + PY +Q P + + + ++QP+ M SP Q H S S+
Sbjct: 294 SPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTG 353
Query: 67 S 67
+
Sbjct: 354 T 354
>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 in
chromosome II precursor
Length = 317
Score = 32.7 bits (73), Expect = 1.2
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 10 TSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSSSRI 69
TS PS ++ + Y++ S S S SS+ PS S S S S +SSSS+
Sbjct: 130 TSIAPSMIGTRTSSSYFITSSSSTPS-SSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKS 188
Query: 70 SGGYNSS 76
S +SS
Sbjct: 189 SSSSSSS 195
Score = 31.6 bits (70), Expect = 2.6
Identities = 26/85 (30%), Positives = 36/85 (41%), Gaps = 5/85 (5%)
Query: 10 TSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSSSRI 69
+S PSS S + SPS SS S + S S S S S++SSSS
Sbjct: 150 SSSTPSSSSSSSSS-----SPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSS 204
Query: 70 SGGYNSSFLGRKVNRKVNDKGWIGS 94
S ++S K + K + +I S
Sbjct: 205 SSKSSASPSSSKSSSKFSSSSFITS 229
>VIT2_CHICK (P02845) Vitellogenin II precursor (Major vitellogenin)
[Contains: Lipovitellin I (LVI); Phosvitin (PV);
Lipovitellin II (LVII); YGP40]
Length = 1850
Score = 32.7 bits (73), Expect = 1.2
Identities = 25/81 (30%), Positives = 35/81 (42%), Gaps = 6/81 (7%)
Query: 4 KTDSDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMD-SPSHQSYGHHSR 62
K+ S + SS RS+ + S S SS SS+ S S SH S+ HH
Sbjct: 1218 KSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSSKSSSHHSHSHH-- 1275
Query: 63 ASSSSRISGGYNSSFLGRKVN 83
S ++G +SS R V+
Sbjct: 1276 ---SGHLNGSSSSSSSSRSVS 1293
Score = 29.6 bits (65), Expect = 9.8
Identities = 23/77 (29%), Positives = 33/77 (41%), Gaps = 3/77 (3%)
Query: 5 TDSDVTSFDPSSPRSQKQTPYYVQSPSRESSH-DGDKSSTMQPSPMDSPSHQSYGHHSRA 63
+ S +S SS S K + ++ S S S H +G SS+ + SH+ + H
Sbjct: 1249 SSSSKSSSSRSSSSSSKSSSHH--SHSHHSGHLNGSSSSSSSSRSVSHHSHEHHSGHLED 1306
Query: 64 SSSSRISGGYNSSFLGR 80
SSS S S GR
Sbjct: 1307 DSSSSSSSSVLSKIWGR 1323
>DDX3_HUMAN (O00571) DEAD-box protein 3 (Helicase-like protein 2)
(HLP2) (DEAD-box, X isoform)
Length = 661
Score = 32.7 bits (73), Expect = 1.2
Identities = 22/74 (29%), Positives = 33/74 (43%), Gaps = 3/74 (4%)
Query: 39 DKSSTMQPSPMDSPSHQSYGHHSRASSSSRISGGYNSSFLGRKVNRKVNDKGWIGSKVIE 98
DK S+ S D ++ S+G S + S S GR +R +D IGS+
Sbjct: 53 DKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSR--- 109
Query: 99 EENGGYGDFDGDGN 112
+ G+G F+ GN
Sbjct: 110 GDRSGFGKFERGGN 123
>NKCR_MOUSE (P30415) NK-tumor recognition protein (Natural-killer
cells cyclophilin-related protein) (NK-TR protein)
Length = 1453
Score = 32.3 bits (72), Expect = 1.5
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 4 KTDSDVTSFD-PSSPRSQKQTPYYVQSPSRESSHDGD----------KSSTMQPSPMDSP 52
++ S +S+D S RS YY +S SR S D +S + + DS
Sbjct: 1376 RSRSRSSSYDLHSRSRSYTYDSYYSRSRSRSRSQRSDSYHRGRSYNRRSRSGRSYGSDSE 1435
Query: 53 SHQSYGHHSRASSSSRIS 70
S +SY HH S SSR S
Sbjct: 1436 SDRSYSHHRSPSESSRYS 1453
>BRD1_SCHPO (Q09948) Bromodomain protein brd1
Length = 542
Score = 32.3 bits (72), Expect = 1.5
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 SDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYG 58
S +TS ++P K +V+S S+ES D PSPMD+ S +YG
Sbjct: 291 SFITSDQAATPDVLKSEEAHVESFSKESEKDQTPIPEDVPSPMDTLSQANYG 342
>SSK2_YEAST (P53599) MAP kinase kinase kinase SSK2 (EC 2.7.1.-)
(Suppressor of sensor kinase 2)
Length = 1579
Score = 32.0 bits (71), Expect = 2.0
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 30 PSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSSSRI---SGGYNSSFLGRKVNRKV 86
P+R + SST+Q + S +S GHH +++S R N RK+ +
Sbjct: 208 PTRSQPNGSTSSSTLQDIVTTNSSQRSVGHHGGSTTSLRTYKKQYVLNEQLYLRKMRNRA 267
Query: 87 ND----KGWIGSKVIEEENGGYGD 106
ND +G + S E++ + +
Sbjct: 268 NDDYYTRGIVASSNFEDDEENFSN 291
>SR40_YEAST (P32583) Suppressor protein SRP40
Length = 406
Score = 32.0 bits (71), Expect = 2.0
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 4 KTDSDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRA 63
++DS +S SS S S S +SS D D SS+ S DS S S +
Sbjct: 192 ESDSQSSSSSSSSDSSSDS-----DSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDS 246
Query: 64 SSSSRISGGYNSS 76
S SS S +SS
Sbjct: 247 SGSSDSSSSSDSS 259
Score = 29.6 bits (65), Expect = 9.8
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 5 TDSDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRAS 64
+DSD + SS S + S S +S D D S+ + ++ + +S + AS
Sbjct: 242 SDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSELETKEATADESKAEETPAS 301
Query: 65 SSSRISGGYNSS 76
S+ +SS
Sbjct: 302 SNESTPSASSSS 313
>FMT_LACPL (Q88WL3) Methionyl-tRNA formyltransferase (EC 2.1.2.9)
Length = 317
Score = 32.0 bits (71), Expect = 2.0
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 223 KSRRTVSVNIQGSKVPLYGAGADVASSVDNG--KISLTLVFEVK 264
K+ + +VN+ GS +P Y GA V S+ NG + +T+++ VK
Sbjct: 98 KAAKIGAVNVHGSLLPKYRGGAPVQYSIINGESETGITIIYMVK 141
>CYAA_PODAN (Q01513) Adenylate cyclase (EC 4.6.1.1) (ATP
pyrophosphate-lyase) (Adenylyl cyclase)
Length = 2145
Score = 32.0 bits (71), Expect = 2.0
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 2 HIKTDSDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHS 61
H K++ D S P+ R + T + + S+ G +S P+P + S+ +GH S
Sbjct: 375 HNKSNEDPRSLRPTVSR-EDSTISVPKDRNGSSTMYGTRSRAQSPAPSTTGSY--WGHKS 431
Query: 62 RASSSSRISGGYNSSFLGRKVNRKVNDK 89
++ G SFLGR + R++ +K
Sbjct: 432 GSTDGQTSPGQPKKSFLGR-LGRRLKEK 458
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.132 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,831,776
Number of Sequences: 164201
Number of extensions: 1567930
Number of successful extensions: 5440
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 5341
Number of HSP's gapped (non-prelim): 114
length of query: 307
length of database: 59,974,054
effective HSP length: 110
effective length of query: 197
effective length of database: 41,911,944
effective search space: 8256652968
effective search space used: 8256652968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Medicago: description of AC122722.4