BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC122166.1 + phase: 0 
         (55 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PIF1_YEAST (P07271) DNA repair and recombination protein PIF1, m...    30  1.2
PIF1_SCHPO (Q9UUA2) DNA repair and recombination protein pif1, m...    29  2.0

>PIF1_YEAST (P07271) DNA repair and recombination protein PIF1,
           mitochondrial precursor
          Length = 857

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 13/22 (59%), Positives = 16/22 (72%)

Query: 10  FSHGQLYVAISRVTSRGGLKIL 31
           F  GQ YVA+SR  SR GL++L
Sbjct: 723 FEKGQAYVALSRAVSREGLQVL 744


>PIF1_SCHPO (Q9UUA2) DNA repair and recombination protein pif1,
           mitochondrial precursor
          Length = 805

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 12/22 (54%), Positives = 17/22 (76%)

Query: 10  FSHGQLYVAISRVTSRGGLKIL 31
           F  GQ YVA+SR T++ GL++L
Sbjct: 740 FEKGQAYVALSRATTQEGLQVL 761


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.322    0.138    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,282,175
Number of Sequences: 164201
Number of extensions: 171467
Number of successful extensions: 457
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 455
Number of HSP's gapped (non-prelim): 2
length of query: 55
length of database: 59,974,054
effective HSP length: 31
effective length of query: 24
effective length of database: 54,883,823
effective search space: 1317211752
effective search space used: 1317211752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)