BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC122162.15 - phase: 0 
         (342 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

SPEE_PYRFU (Q8U4G1) Probable spermidine synthase (EC 2.5.1.16) (...    33  1.0
2ACC_HUMAN (Q9Y5P8) Serine/threonine protein phosphatase 2A, 48 ...    32  1.8
PTH_PROMP (Q7V342) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)         31  5.2
YCE2_YEAST (P25572) Hypothetical protein YCL042W                       30  6.7
VGLM_DUGBV (Q02004) M polyprotein precursor [Contains: Glycoprot...    30  6.7
PQQB_GLUOX (Q9L3B3) Coenzyme PQQ synthesis protein B (Pyrroloqui...    30  6.7

>SPEE_PYRFU (Q8U4G1) Probable spermidine synthase (EC 2.5.1.16)
           (Putrescine aminopropyltransferase) (SPDSY)
          Length = 281

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 33/124 (26%), Positives = 51/124 (40%), Gaps = 19/124 (15%)

Query: 232 GRFYVLDQSGQTVTVGPDSSTE------LAAHPLYQRCV------RGKNRKLLVESEGEL 279
           GR   LD + Q VT+G  S  E      + AHP  +R +       G  R++L     E+
Sbjct: 42  GRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRVLVIGGGDGGTVREVLQHDVDEV 101

Query: 280 LLLDIHQTFFQFSMKIFKLDEN------RKKWEKLK-KLGDRILFVGSGCSFSASALDLC 332
           ++++I +     S  + K+D          K EK K  +GD   F+ +   F     D  
Sbjct: 102 IMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGFDVIIADST 161

Query: 333 LPKG 336
            P G
Sbjct: 162 DPVG 165


>2ACC_HUMAN (Q9Y5P8) Serine/threonine protein phosphatase 2A, 48 kDa
           regulatory subunit B (PP2A, subunit B, PR48 isoform)
          Length = 414

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 23/191 (12%)

Query: 138 FSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQH--GSYLYPQTVLAVTCHGKKPLVLG 195
           FS+    V + KF       D +ID DD    N H   + +  +        G+K    G
Sbjct: 150 FSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEG 209

Query: 196 TLSYCSSKPVLFHDQDKR-------WTPVSNLSTANGDICLFKGRFYVLDQSGQTVTVGP 248
            +SY      L  ++DK+       W    +L   +G + +F+  ++  +Q  +      
Sbjct: 210 KISYADFVWFLISEEDKKTPTSIEYWFRCMDLD-GDGALSMFELEYFYEEQCRRL----- 263

Query: 249 DSSTELAAHPLYQRCVRGKNRKLLVESEGELLLLDIHQ-----TFFQFSMKIFK-LDENR 302
             S  + A P +Q C+      +   +EG++ L D+ +      FF     I K LD  +
Sbjct: 264 -DSMAIEALP-FQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQ 321

Query: 303 KKWEKLKKLGD 313
           K+   L + GD
Sbjct: 322 KEQISLLRDGD 332


>PTH_PROMP (Q7V342) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)
          Length = 203

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 22/77 (28%), Positives = 38/77 (48%), Gaps = 1/77 (1%)

Query: 2   ASVDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQ-FPLLKYVP 60
           A VDW ++  D LF+I   +D+ L  IRFR   S+   + I +  N L  + F  +K   
Sbjct: 79  AIVDWYKIDLDRLFIIVDDIDLPLGKIRFRKKGSSGGHNGIKDIINKLQTENFNRIKIGI 138

Query: 61  APDSINNNNEIIDNINN 77
               +N   + ++ I++
Sbjct: 139 GSPPVNERKKTLNTISH 155


>YCE2_YEAST (P25572) Hypothetical protein YCL042W
          Length = 119

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 50  PFQFPLLKYVPAPDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCR 109
           P+++PL    P P S+ N+  +  N    NT+  Y    S    KP +E+         R
Sbjct: 50  PYKYPLSTEPPTPPSVPNSASVNHN-TTTNTTLSYTRCHSTTYTKPLRERSS-------R 101

Query: 110 PW 111
           PW
Sbjct: 102 PW 103


>VGLM_DUGBV (Q02004) M polyprotein precursor [Contains: Glycoprotein
           G2; Nonstructural protein NS-M; Glycoprotein G1]
          Length = 1551

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 21/89 (23%), Positives = 36/89 (39%), Gaps = 4/89 (4%)

Query: 62  PDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSSG 121
           P +   +  +   I    T     + +S +  K  Q   ++ET+I   P ++     +S 
Sbjct: 49  PQTTTTSTAVSTTITATTTPTASWTTQSQYFNKTTQHHWREETMISRNPTVLDRQSRASS 108

Query: 122 KTQLLNPPFVSL----KSTAFSHLPNAVN 146
             +LLN  F+ L         +HL NA N
Sbjct: 109 VRELLNTKFLMLLGFIPKGEVNHLENACN 137


>PQQB_GLUOX (Q9L3B3) Coenzyme PQQ synthesis protein B
           (Pyrroloquinoline quinone biosynthesis protein B)
          Length = 304

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 22/96 (22%), Positives = 40/96 (40%), Gaps = 4/96 (4%)

Query: 169 QNQHGSYLYPQTVLAVTCHGKKPLVLGTLSYC----SSKPVLFHDQDKRWTPVSNLSTAN 224
           + + G+    Q  LAV+  GK+  +L          S  P L H    R TP+  +    
Sbjct: 29  RTRQGAKAGTQASLAVSADGKRWFILNASPDLRQNHSDAPALHHQGSLRGTPIQGVVLTC 88

Query: 225 GDICLFKGRFYVLDQSGQTVTVGPDSSTELAAHPLY 260
           G+I    G   + ++   T+     +  +LA +P++
Sbjct: 89  GEIDAITGLLTLREREPFTLMGSESTLQQLADNPIF 124


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.322    0.138    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,883,695
Number of Sequences: 164201
Number of extensions: 1805352
Number of successful extensions: 3985
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3985
Number of HSP's gapped (non-prelim): 6
length of query: 342
length of database: 59,974,054
effective HSP length: 111
effective length of query: 231
effective length of database: 41,747,743
effective search space: 9643728633
effective search space used: 9643728633
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)