BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121240.11 + phase: 0 /pseudo
(153 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... 32 0.54
UP3B_HUMAN (Q9BT76) Uroplakin 3B precursor (Uroplakin IIIb) (UPI... 32 0.71
ITA2_DROME (P12080) Integrin alpha-PS2 precursor (Position-speci... 32 0.71
IF2_SYNEL (Q8DK04) Translation initiation factor IF-2 32 0.71
SETB_MOUSE (O88974) Histone-lysine N-methyltransferase, H3 lysin... 30 1.6
HIR1_YEAST (P32479) Histone transcription regulator 1 30 1.6
PHD1_SCHPO (O13298) Histone deacetylase phd1 30 2.1
KF1D_RAT (O35787) Kinesin-like protein KIF1D 30 2.1
HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation prote... 30 2.1
MM15_MOUSE (O54732) Matrix metalloproteinase-15 precursor (EC 3.... 29 3.5
MM15_HUMAN (P51511) Matrix metalloproteinase-15 precursor (EC 3.... 29 4.6
PR4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele... 28 6.0
MY15_HUMAN (Q9UKN7) Myosin XV (Unconventional myosin-15) 28 6.0
DAM1_HUMAN (Q9Y4D1) Disheveled associated activator of morphogen... 28 6.0
Y121_MYCPN (P75514) Hypothetical protein MG121 homolog (A65_orf311) 28 7.8
PUNA_CELSP (P81989) Purine nucleoside phosphorylase (EC 2.4.2.1)... 28 7.8
PHR2_HUMAN (O75167) Phosphatase and actin regulator 2 28 7.8
NA18_ARATH (Q9ZNU2) NAC-domain containing protein 18 (ANAC018) (... 28 7.8
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall
hydroxyproline-rich glycoprotein)
Length = 620
Score = 32.0 bits (71), Expect = 0.54
Identities = 18/54 (33%), Positives = 22/54 (40%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRP 143
PP P P + P PT + L S S PPP++ P P PT P
Sbjct: 319 PPPPAYSPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPP 372
>UP3B_HUMAN (Q9BT76) Uroplakin 3B precursor (Uroplakin IIIb)
(UPIIIb) (p35)
Length = 320
Score = 31.6 bits (70), Expect = 0.71
Identities = 19/60 (31%), Positives = 24/60 (39%), Gaps = 8/60 (13%)
Query: 86 LTDVPPQPNSPPDNVFR--PDRPTKVGLGSKKRGSAPPPI------HGIITDPFCRLPLP 137
L D+P P D + P P ++ G GS P+ HG PFC PLP
Sbjct: 144 LADIPASPQLLTDGHYMTLPLSPDQLPCGDPMAGSGGAPVLRVGHDHGCHQQPFCNAPLP 203
>ITA2_DROME (P12080) Integrin alpha-PS2 precursor (Position-specific
antigen 2, alpha chain) (Protein inflated)
Length = 1396
Score = 31.6 bits (70), Expect = 0.71
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 65 PFVPHEISVLVKLILGHLRYLLTD-VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPI 123
P V H S+L +I + +L D + Q N PDN+ PD KV K +P P+
Sbjct: 630 PMVRHRRSILEPVIDQNREIVLRDAINIQKNCGPDNICEPDLKLKVSTVDKYLFGSPEPL 689
>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2
Length = 957
Score = 31.6 bits (70), Expect = 0.71
Identities = 26/72 (36%), Positives = 29/72 (40%), Gaps = 21/72 (29%)
Query: 90 PPQPNSPPDNVFRPDRPT----KVGLGSKKRGS------------APPPIHGIITDPFCR 133
PP+P P RP RP K S+K+ S APPP H I P
Sbjct: 317 PPKPKVP-----RPARPVTPAAKTEKSSEKKQSRHRDRRPEEPAEAPPPDHITIAGPMSV 371
Query: 134 LPLPTLFHRPEA 145
L TL RPEA
Sbjct: 372 QELATLVRRPEA 383
>SETB_MOUSE (O88974) Histone-lysine N-methyltransferase, H3 lysine-9
specific 4 (EC 2.1.1.43) (Histone H3-K9
methyltransferase 4) (H3-K9-HMTase 4) (SET domain
bifurcated 1) (ERG-associated protein with SET domain)
(ESET)
Length = 1307
Score = 30.4 bits (67), Expect = 1.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 91 PQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGII----TDPFCRLPLPTLFHRP 143
P +PP P PT G + APP HG++ +P R P+ LF+ P
Sbjct: 536 PASAAPPVPPVPPGPPTPPGPPAPPGPLAPPAFHGMLERAPAEPSYRAPMEKLFYLP 592
>HIR1_YEAST (P32479) Histone transcription regulator 1
Length = 788
Score = 30.4 bits (67), Expect = 1.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 115 KRGSAPPPIHGIITDPFCRLPLPTLFHRPEAVHLGDLMR 153
K G I IIT+PF PL T F RP +G++++
Sbjct: 158 KTGDISFTIEHIITEPFKESPLTTYFRRPSWSPMGNILQ 196
>PHD1_SCHPO (O13298) Histone deacetylase phd1
Length = 434
Score = 30.0 bits (66), Expect = 2.1
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 21 PQASYPCGNFSDTSSFKFRRSKGSIGHAFTVGIRTGNQNQTSFYPFVPHEISVLVKLILG 80
P+ S P S F FR K + + + + GN + +P PH I++ L++G
Sbjct: 4 PETSTPYEQVEKGSFFSFRPQKKRV--TYHLDEQVGNYHYGDKHPMKPHRITITNHLVMG 61
Query: 81 H 81
+
Sbjct: 62 Y 62
>KF1D_RAT (O35787) Kinesin-like protein KIF1D
Length = 1097
Score = 30.0 bits (66), Expect = 2.1
Identities = 18/44 (40%), Positives = 23/44 (51%), Gaps = 5/44 (11%)
Query: 86 LTDVPPQPNSPPDNVFRPDRPTKVGL--GSKKRG---SAPPPIH 124
+T PP PN P + RP RP + L GS+ RG + P P H
Sbjct: 1004 VTAPPPPPNRRPPSPRRPHRPRRNSLDGGSRSRGGGSTQPEPQH 1047
>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein
2)
Length = 634
Score = 30.0 bits (66), Expect = 2.1
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 88 DVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRPE 144
D PPQP+ P DN +PD+P PPI I TD +P + PE
Sbjct: 145 DNPPQPDIPCDNPPQPDQP-----------DDNPPIPNIPTDWIPNIPTDWIPDIPE 190
>MM15_MOUSE (O54732) Matrix metalloproteinase-15 precursor (EC
3.4.24.-) (MMP-15) (Membrane-type matrix
metalloproteinase 2) (MT-MMP 2) (MTMMP2)
(Membrane-type-2 matrix metalloproteinase) (MT2-MMP)
(MT2MMP)
Length = 657
Score = 29.3 bits (64), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHG 125
PP+P PP +P+RP K G + R + P +G
Sbjct: 327 PPRPPQPPHPGGKPERPPKPGPPPQPRATERPDQYG 362
>MM15_HUMAN (P51511) Matrix metalloproteinase-15 precursor (EC
3.4.24.-) (MMP-15) (Membrane-type matrix
metalloproteinase 2) (MT-MMP 2) (MTMMP2)
(Membrane-type-2 matrix metalloproteinase) (MT2-MMP)
(MT2MMP) (SMCP-2)
Length = 669
Score = 28.9 bits (63), Expect = 4.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHG 125
PP+P PP +P+RP K G + R + P +G
Sbjct: 331 PPRPPQPPPPGGKPERPPKPGPPVQPRATERPDQYG 366
>PR4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele S
precursor (Salivary proline-rich protein Po) (Parotid o
protein) [Contains: Protein N1; Glycosylated protein A]
Length = 247
Score = 28.5 bits (62), Expect = 6.0
Identities = 12/31 (38%), Positives = 19/31 (60%), Gaps = 1/31 (3%)
Query: 92 QPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 122
Q PP + +P+RP G G++ +G+ PPP
Sbjct: 88 QSQGPPPHPGKPERPPPQG-GNQSQGTPPPP 117
>MY15_HUMAN (Q9UKN7) Myosin XV (Unconventional myosin-15)
Length = 3530
Score = 28.5 bits (62), Expect = 6.0
Identities = 23/63 (36%), Positives = 31/63 (48%), Gaps = 12/63 (19%)
Query: 89 VPPQPNS-----PPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRL--PLPTLFH 141
VPP S PP RP P G GS++ S PPP+ +PF +L P+P+
Sbjct: 922 VPPLAPSWDVDMPPTQ--RPPSPWPGGAGSRRGFSRPPPVP---ENPFLQLLGPVPSPTL 976
Query: 142 RPE 144
+PE
Sbjct: 977 QPE 979
>DAM1_HUMAN (Q9Y4D1) Disheveled associated activator of
morphogenesis 1
Length = 1078
Score = 28.5 bits (62), Expect = 6.0
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLP 135
PP P PP P +GL KK+ S P P + + + + +LP
Sbjct: 575 PPPPGPPPLGAIMPPPGAPMGLALKKK-SIPQPTNALKSFNWSKLP 619
>Y121_MYCPN (P75514) Hypothetical protein MG121 homolog (A65_orf311)
Length = 311
Score = 28.1 bits (61), Expect = 7.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 44 SIGHAFTVGIRTGNQNQTSFYPFVPHEISVLVKLILGHL 82
++ + T G+ GN N T +P IS+LV ++ G+L
Sbjct: 258 ALAYVLTTGV-VGNANNTYLLRTIPFIISLLVMMVFGYL 295
>PUNA_CELSP (P81989) Purine nucleoside phosphorylase (EC 2.4.2.1)
(Inosine phosphorylase) (PNP)
Length = 282
Score = 28.1 bits (61), Expect = 7.8
Identities = 18/55 (32%), Positives = 26/55 (46%), Gaps = 2/55 (3%)
Query: 3 GIADIEGSKSNVAMNAWMPQASYPC--GNFSDTSSFKFRRSKGSIGHAFTVGIRT 55
G A++ G +P S P G+ S T S + R+ GS+ HA +G RT
Sbjct: 50 GAAELLGEVVAEVPTHEIPGFSAPAVAGHLSVTRSIRVERADGSVRHALVLGSRT 104
>PHR2_HUMAN (O75167) Phosphatase and actin regulator 2
Length = 634
Score = 28.1 bits (61), Expect = 7.8
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLP 137
PP+P S P P P G+ +G PPI P + P+P
Sbjct: 160 PPKPRSKPKPKKSPVPPKGATAGASHKGDEVPPIKKNTKAPGKQAPVP 207
>NA18_ARATH (Q9ZNU2) NAC-domain containing protein 18 (ANAC018) (NO
APICAL MERISTEM protein) (AtNAM)
Length = 320
Score = 28.1 bits (61), Expect = 7.8
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 90 PPQPNSPPDNVFRP-DRPTKVGLGSKKRGSAPPPIHGIITD 129
PPQPN PP F P D + +K S P P+ II D
Sbjct: 12 PPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPV-AIIAD 51
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.141 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,533,755
Number of Sequences: 164201
Number of extensions: 904923
Number of successful extensions: 2046
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2018
Number of HSP's gapped (non-prelim): 35
length of query: 153
length of database: 59,974,054
effective HSP length: 101
effective length of query: 52
effective length of database: 43,389,753
effective search space: 2256267156
effective search space used: 2256267156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC121240.11