BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121239.3 + phase: 0 /pseudo
(616 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ARAE_BACSU (P96710) Arabinose-proton symporter (Arabinose transp... 150 9e-36
MYCT_HUMAN (Q96QE2) Proton myo-inositol cotransporter (H(+)-myo-... 147 6e-35
MYCT_RAT (Q921A2) Proton myo-inositol cotransporter (H(+)-myo-in... 140 1e-32
CSBC_BACSU (P46333) Probable metabolite transport protein csbC 138 5e-32
GALP_ECOLI (P37021) Galactose-proton symporter (Galactose transp... 133 2e-30
XYLT_LACBR (O52733) D-xylose-proton symporter (D-xylose transpor... 132 3e-30
YFIG_BACSU (P54723) Hypothetical metabolite transport protein yfiG 127 7e-29
GTR1_LEIDO (Q01440) Membrane transporter D1 125 4e-28
ARAE_ECOLI (P09830) Arabinose-proton symporter (Arabinose transp... 124 7e-28
ARAE_KLEOX (P45598) Arabinose-proton symporter (Arabinose transp... 123 2e-27
XYLE_ECOLI (P09098) D-xylose-proton symporter (D-xylose transpor... 117 9e-26
GLCP_SYNY3 (P15729) Glucose transport protein 115 3e-25
ITR2_YEAST (P30606) Myo-inositol transporter 2 111 5e-24
ITR1_SCHPO (Q10286) Myo-inositol transporter 1 111 5e-24
HXTA_YEAST (P54862) Hexose transporter HXT11 (Low-affinity gluco... 108 3e-23
HXT1_YEAST (P32465) Low-affinity glucose transporter HXT1 107 9e-23
HXT9_YEAST (P40885) Hexose transporter HXT9 105 3e-22
HXT2_YEAST (P23585) High-affinity glucose transporter HXT2 105 3e-22
KHT2_KLULA (P53387) Hexose transporter 2 103 1e-21
HXT4_YEAST (P32467) Low-affinity glucose transporter HXT4 (Low-a... 102 2e-21
>ARAE_BACSU (P96710) Arabinose-proton symporter (Arabinose
transporter)
Length = 464
Score = 150 bits (379), Expect = 9e-36
Identities = 86/216 (39%), Positives = 132/216 (60%), Gaps = 9/216 (4%)
Query: 1 MSGAVIVAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVT 60
M ++++ AA +G LL G+D A I+G+I ++K + L P +EGL+++ +IG V
Sbjct: 20 MGFVILISCAAGLGGLLYGYDTAVISGAIGFLKDLYSLS--PFMEGLVISSIMIGGVVGV 77
Query: 61 TCSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLY 120
SG LSD FGRR +L+ ++LL+ +S++V S +V L+ AR++ GLGIG+ +L Y
Sbjct: 78 GISGFLSDRFGRRKILMTAALLFAISAIVSALSQDVSTLIIARIIGGLGIGMGSSLSVTY 137
Query: 121 ISEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFGMSLTKA------PSWRLMLGVLSIPS 174
I+E APP IRGSL++L Q G+ +Y + + + WR ML +PS
Sbjct: 138 ITEAAPPAIRGSLSSLYQLFTILGISATYFINLAVQRSGTYEWGVHTGWRWMLAYGMVPS 197
Query: 175 LIYFALTLLLLPESPRWLVSKGRMLEAKKVLQRLRG 210
+I+F L LL++PESPRWL G+ EA K+L R+ G
Sbjct: 198 VIFF-LVLLVVPESPRWLAKAGKTNEALKILTRING 232
Score = 47.4 bits (111), Expect = 1e-04
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 506 SWNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSSTSSS 565
S + LF+PG++ AL +G+ L + Q G+N + YY P+I + G G N G +T
Sbjct: 254 SLSQLFKPGLRKALVIGILLALFNQVIGMNAITYYGPEIFKMMGFG---QNAGFVTTCIV 310
Query: 566 FLISAVTTLLMLPCIAVAMRLMDISGR 592
++ + T+ +A+ L+D GR
Sbjct: 311 GVVEVIFTV-------IAVLLIDKVGR 330
>MYCT_HUMAN (Q96QE2) Proton myo-inositol cotransporter
(H(+)-myo-inositol cotransporter) (Hmit)
Length = 629
Score = 147 bits (372), Expect = 6e-35
Identities = 80/212 (37%), Positives = 129/212 (60%), Gaps = 3/212 (1%)
Query: 6 IVAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSGA 65
+VAV +A+G L G+D ++G++L +KR QL + + L+V+ ++ A V GA
Sbjct: 64 VVAVFSALGGFLFGYDTGVVSGAMLLLKR--QLSLDALWQELLVSSTVGAAAVSALAGGA 121
Query: 66 LSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIA 125
L+ +FGRR ++++S L+ S V+ + N LL RL+ GLGIG+A VP+YI+E++
Sbjct: 122 LNGVFGRRAAILLASALFTAGSAVLAAANNKETLLAGRLVVGLGIGIASMTVPVYIAEVS 181
Query: 126 PPEIRGSLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLLLL 185
PP +RG L T+ + G FF+ + S + WR MLG+ +P++I F L L
Sbjct: 182 PPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAXVPAVIQF-FGFLFL 240
Query: 186 PESPRWLVSKGRMLEAKKVLQRLRGCQDVAGE 217
PESPRWL+ KG+ +A+++L ++RG Q + E
Sbjct: 241 PESPRWLIQKGQTQKARRILSQMRGNQTIDEE 272
Score = 45.8 bits (107), Expect = 3e-04
Identities = 20/38 (52%), Positives = 27/38 (70%)
Query: 513 PGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGV 550
P + AL VG GLQ+ QQ SGIN ++YY+ IL+ +GV
Sbjct: 301 PPTRRALIVGCGLQMFQQLSGINTIMYYSATILQMSGV 338
>MYCT_RAT (Q921A2) Proton myo-inositol cotransporter
(H(+)-myo-inositol cotransporter) (Hmit)
Length = 618
Score = 140 bits (353), Expect = 1e-32
Identities = 80/216 (37%), Positives = 130/216 (60%), Gaps = 5/216 (2%)
Query: 4 AVIVAVAA--AIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTT 61
A + A AA A+G L G+D ++G++L ++R+ +L + + L+V+ ++ A V
Sbjct: 49 AFVYAAAAFSALGGFLFGYDTGVVSGAMLLLRRQMRLGA--MWQELLVSGAVGAAAVAAL 106
Query: 62 CSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYI 121
GAL+ GRR ++++S L + S V+ + N LL RL+ GLGIG+A VP+YI
Sbjct: 107 AGGALNGALGRRSAILLASALCTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVPVYI 166
Query: 122 SEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALT 181
+E++PP +RG L T+ + G FF+ + S + WR MLG+ +IP++I F L
Sbjct: 167 AEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAIPAVIQF-LG 225
Query: 182 LLLLPESPRWLVSKGRMLEAKKVLQRLRGCQDVAGE 217
L LPESPRWL+ KG+ +A+++L ++RG Q + E
Sbjct: 226 FLFLPESPRWLIQKGQTQKARRILSQMRGNQTIDEE 261
Score = 46.2 bits (108), Expect = 3e-04
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 499 ETAAKGPS-WNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGV 550
E +A GP L P + AL VG GLQ+ QQ SGIN ++YY+ IL+ +GV
Sbjct: 275 EASAAGPIICRMLSYPPTRRALAVGCGLQMFQQLSGINTIMYYSATILQMSGV 327
>CSBC_BACSU (P46333) Probable metabolite transport protein csbC
Length = 461
Score = 138 bits (347), Expect = 5e-32
Identities = 71/222 (31%), Positives = 134/222 (59%), Gaps = 5/222 (2%)
Query: 12 AIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSGALSDLFG 71
A+G LL G+D I+G++L+I + L + EGL+V+M L+GA + SG SD +G
Sbjct: 15 ALGGLLYGYDTGVISGALLFINNDIPLTT--LTEGLVVSMLLLGAIFGSALSGTCSDRWG 72
Query: 72 RRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAPPEIRG 131
RR ++ + S+++ + +L +S + +L+ +R++ GL +G + LVP+Y+SE+AP +IRG
Sbjct: 73 RRKVVFVLSIIFIIGALACAFSQTIGMLIASRVILGLAVGGSTALVPVYLSEMAPTKIRG 132
Query: 132 SLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLLLLPESPRW 191
+L T+ G+ +Y + T +WR M+G+ ++P+++ + + +PESPRW
Sbjct: 133 TLGTMNNLMIVTGILLAY--IVNYLFTPFEAWRWMVGLAAVPAVL-LLIGIAFMPESPRW 189
Query: 192 LVSKGRMLEAKKVLQRLRGCQDVAGEMALLVEGLGVGGDTSI 233
LV +G EA++++ +D+ E+A + +G +T++
Sbjct: 190 LVKRGSEEEARRIMNITHDPKDIEMELAEMKQGEAEKKETTL 231
Score = 49.3 bits (116), Expect = 3e-05
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 515 VKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSSTSSSFLISAVTTL 574
++ L +GVGL I QQ GIN V+YY P I +AG+G S LG +I +T +
Sbjct: 239 IRPMLLIGVGLAIFQQAVGINTVIYYAPTIFTKAGLGTSASALGTMGIGILNVIMCITAM 298
Query: 575 LML 577
+++
Sbjct: 299 ILI 301
>GALP_ECOLI (P37021) Galactose-proton symporter (Galactose
transporter)
Length = 464
Score = 133 bits (334), Expect = 2e-30
Identities = 80/203 (39%), Positives = 121/203 (59%), Gaps = 5/203 (2%)
Query: 7 VAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSGAL 66
V AA+ LL G D IAG++ +I EFQ+ S + +V+ + GA V SG L
Sbjct: 18 VCFLAALAGLLFGLDIGVIAGALPFIADEFQITSH--TQEWVVSSMMFGAAVGAVGSGWL 75
Query: 67 SDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAP 126
S GR+ L+I ++L+ SL +PNV +L+ +R+L GL +G+A PLY+SEIAP
Sbjct: 76 SFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAP 135
Query: 127 PEIRGSLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLLLLP 186
+IRGS+ ++ Q + G+ +Y S T A WR MLGV+ IP+++ + + LP
Sbjct: 136 EKIRGSMISMYQLMITIGILGAYLSDTAFSYTGA--WRWMLGVIIIPAIL-LLIGVFFLP 192
Query: 187 ESPRWLVSKGRMLEAKKVLQRLR 209
+SPRW +K R ++A++VL RLR
Sbjct: 193 DSPRWFAAKRRFVDAERVLLRLR 215
Score = 45.4 bits (106), Expect = 4e-04
Identities = 25/77 (32%), Positives = 44/77 (56%), Gaps = 9/77 (11%)
Query: 516 KHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSSTSSSFLISAVTTLL 575
+ A+F+GV LQ++QQF+G+N ++YY P+I E A G ++T+ + + L
Sbjct: 249 RRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELA---------GYTNTTEQMWGTVIVGLT 299
Query: 576 MLPCIAVAMRLMDISGR 592
+ +A+ L+D GR
Sbjct: 300 NVLATFIAIGLVDRWGR 316
>XYLT_LACBR (O52733) D-xylose-proton symporter (D-xylose
transporter)
Length = 457
Score = 132 bits (331), Expect = 3e-30
Identities = 74/204 (36%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 12 AIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSGALSDLFG 71
A+G LL G+D I+G+IL+I+++ L S +G +V+ L+GA + G SD FG
Sbjct: 14 ALGGLLFGYDTGVISGAILFIQKQMNLGSWQ--QGWVVSAVLLGAILGAAIIGPSSDRFG 71
Query: 72 RRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAPPEIRG 131
RR +L++S++++F+ +L +SP + L+ +R++ G+ +G A L+P Y++E+AP + RG
Sbjct: 72 RRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRG 131
Query: 132 SLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLLLLPESPRW 191
++++L Q G+ +Y + S WR MLG +IP+ + F L L+LPESPR+
Sbjct: 132 TVSSLFQLMVMTGILLAYITNYSFS-GFYTGWRWMLGFAAIPAALLF-LGGLILPESPRF 189
Query: 192 LVSKGRMLEAKKVLQRLRGCQDVA 215
LV G + EA+ VL + VA
Sbjct: 190 LVKSGHLDEARHVLDTMNKHDQVA 213
Score = 51.2 bits (121), Expect = 8e-06
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 444 GPGSIRASVVSLPGGDVPTDGDVVQQAAALVSQPALYNKELMHQQPVGPAMIHPSETAAK 503
G +I A+++ L G +P + ++ L + + H Q I+ + +AK
Sbjct: 167 GFAAIPAALLFLGGLILPESPRFLVKSGHLDEARHVLDTMNKHDQVAVNKEINDIQESAK 226
Query: 504 GPS--WNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGY---LLSNLG 558
S W++LF V+ +L +G+GL I QQ G N VLYY P I G G LL+++G
Sbjct: 227 IVSGGWSELFGKMVRPSLIIGIGLAIFQQVMGCNTVLYYAPTIFTDVGFGVSAALLAHIG 286
Query: 559 LSSTSSSFLISAVTTLLM 576
+ + +++A+ +M
Sbjct: 287 IG--IFNVIVTAIAVAIM 302
>YFIG_BACSU (P54723) Hypothetical metabolite transport protein yfiG
Length = 482
Score = 127 bits (320), Expect = 7e-29
Identities = 92/310 (29%), Positives = 158/310 (50%), Gaps = 27/310 (8%)
Query: 7 VAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSGAL 66
+ + + G LL G+D I G++ ++ QL P EGL+ + L+GA G L
Sbjct: 24 ITLVSTFGGLLFGYDTGVINGALPFMATAGQLNLTPVTEGLVASSLLLGAAFGAMFGGRL 83
Query: 67 SDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAP 126
SD GRR ++ +LL+ ++L +SPN +++ R L GL +G A VP +++EI+P
Sbjct: 84 SDRHGRRKTILYLALLFIAATLGCTFSPNASVMIAFRFLLGLAVGCASVTVPTFLAEISP 143
Query: 127 PEIRGSLNTLPQFAGSAGMFFSYCM--VFGMSLTKAPS-WRLMLGVLSIPSLIYFALTLL 183
E RG + T + G +Y + G ++ ++ + WR ML + ++P+++ + +L
Sbjct: 144 AERRGRIVTQNELMIVIGQLLAYTFNAIIGSTMGESANVWRYMLVIATLPAVVLW-FGML 202
Query: 184 LLPESPRWLVSKGRMLEAKKVLQRLR---GCQDVAGEMALLVEGLG--VGGDTSIEEYI- 237
++PESPRWL +KGRM +A +VL+++R Q E+ +EG G E +I
Sbjct: 203 IVPESPRWLAAKGRMGDALRVLRQIREDSQAQQEIKEIKHAIEGTAKKAGFHDFQEPWIR 262
Query: 238 ----IGPDNELADEEDPSTGKDQIKLYGPEHGQSWVARPVTGQSSVGLVSRKGSMANPSG 293
IG + + TG + I YG E + R Q+ L+ G++AN G
Sbjct: 263 RILFIGIGIAIVQQ---ITGVNSIMYYGTE-----ILREAGFQTEAALI---GNIAN--G 309
Query: 294 LVDPLVTLFG 303
++ + +FG
Sbjct: 310 VISVIAVIFG 319
Score = 55.1 bits (131), Expect = 5e-07
Identities = 22/54 (40%), Positives = 36/54 (65%)
Query: 496 HPSETAAKGPSWNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAG 549
H E AK ++D EP ++ LF+G+G+ I+QQ +G+N ++YY +IL +AG
Sbjct: 242 HAIEGTAKKAGFHDFQEPWIRRILFIGIGIAIVQQITGVNSIMYYGTEILREAG 295
>GTR1_LEIDO (Q01440) Membrane transporter D1
Length = 547
Score = 125 bits (313), Expect = 4e-28
Identities = 66/203 (32%), Positives = 114/203 (55%), Gaps = 2/203 (0%)
Query: 7 VAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSGAL 66
V + AA+G L G+D I ++ +K F LIVA+++ GA V SG +
Sbjct: 5 VMLCAALGGFLFGYDTGVINAALFQMKDHFGFSEHSWQYALIVAIAIAGAFVGAFISGFI 64
Query: 67 SDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAP 126
S FGRRP + ++ L+ + S++M +PNV ++L +R++ GL IG++ +P+Y++E+
Sbjct: 65 SAAFGRRPCIAVADALFVIGSVLMGAAPNVEVVLVSRVIVGLAIGISSATIPVYLAEVTS 124
Query: 127 PEIRGSLNTLPQFAGSAGMFFS--YCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLLL 184
P+ RG+ L + G F + + + + +K WR+ +G+ ++P+++ L
Sbjct: 125 PKHRGATIVLNNLFLTGGQFVAAGFTAIMVVFTSKNIGWRVAIGIGALPAVVQAFCLLFF 184
Query: 185 LPESPRWLVSKGRMLEAKKVLQR 207
LPESPRWL+SKG AK V +
Sbjct: 185 LPESPRWLLSKGHADRAKAVADK 207
Score = 38.9 bits (89), Expect = 0.040
Identities = 18/43 (41%), Positives = 27/43 (61%)
Query: 507 WNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAG 549
+ L ++ + + GLQI+QQFSGIN ++YY+ IL AG
Sbjct: 228 YRPLMARDMRFRVVLSSGLQIIQQFSGINTIMYYSSVILYDAG 270
>ARAE_ECOLI (P09830) Arabinose-proton symporter (Arabinose
transporter)
Length = 472
Score = 124 bits (311), Expect = 7e-28
Identities = 72/213 (33%), Positives = 129/213 (59%), Gaps = 5/213 (2%)
Query: 5 VIVAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSG 64
+ V+VAAA+ LL G D IAG++ +I F L S ++ +V+ ++GA + +G
Sbjct: 23 MFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSR--LQEWVVSSMMLGAAIGALFNG 80
Query: 65 ALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEI 124
LS GR+ L+ ++L+ L S+ ++ +V +L+ AR++ G+ +G+A PLY+SE+
Sbjct: 81 WLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEM 140
Query: 125 APPEIRGSLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLLL 184
A +RG + ++ Q + G+ ++ + + + + +WR MLGVL++P+++ L ++
Sbjct: 141 ASENVRGKMISMYQLMVTLGIVLAF--LSDTAFSYSGNWRAMLGVLALPAVLLIIL-VVF 197
Query: 185 LPESPRWLVSKGRMLEAKKVLQRLRGCQDVAGE 217
LP SPRWL KGR +EA++VL+ LR + A E
Sbjct: 198 LPNSPRWLAEKGRHIEAEEVLRMLRDTSEKARE 230
Score = 46.2 bits (108), Expect = 3e-04
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 515 VKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSSTSSSFLISAVTTL 574
V+ A+F+G+ LQ +QQF+G+N ++YY P+I + A G ++T + + V L
Sbjct: 255 VRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMA---------GFTTTEQQMIATLVVGL 305
Query: 575 LMLPCIAVAMRLMDISGRSISFHI 598
+ +A+ +D +GR + I
Sbjct: 306 TFMFATFIAVFTVDKAGRKPALKI 329
>ARAE_KLEOX (P45598) Arabinose-proton symporter (Arabinose
transporter)
Length = 472
Score = 123 bits (308), Expect = 2e-27
Identities = 70/209 (33%), Positives = 127/209 (60%), Gaps = 5/209 (2%)
Query: 7 VAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSGAL 66
V++AAA+ LL G D IAG++ +I F L S ++ +V+ ++GA + +G L
Sbjct: 25 VSIAAAVAGLLFGLDIGVIAGALPFITDHFVLSSR--LQEWVVSSMMLGAAIGALFNGWL 82
Query: 67 SDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAP 126
S GR+ L++ ++L+ S+ ++ +V +LL AR++ G+ +G+A PLY+SE+A
Sbjct: 83 SFRLGRKYSLMVGAVLFVAGSVGSAFATSVEMLLVARIVLGVAVGIASYTAPLYLSEMAS 142
Query: 127 PEIRGSLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLLLLP 186
+RG + ++ Q + G+ ++ + + + + +WR MLGVL++P+++ L ++ LP
Sbjct: 143 ENVRGKMISMYQLMVTLGIVMAF--LSDTAFSYSGNWRAMLGVLALPAVVLIIL-VIFLP 199
Query: 187 ESPRWLVSKGRMLEAKKVLQRLRGCQDVA 215
SPRWL KGR +EA++VL+ LR + A
Sbjct: 200 NSPRWLAEKGRHVEAEEVLRMLRDTSEKA 228
Score = 45.8 bits (107), Expect = 3e-04
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 515 VKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSSTSSSFLISAVTTL 574
V+ A+F+G+ LQ +QQF+G+N ++YY P+I + A G ++T + + V L
Sbjct: 255 VRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMA---------GFTTTEQQMVATLVVGL 305
Query: 575 LMLPCIAVAMRLMDISGRSISFHI 598
+ +A+ +D +GR + I
Sbjct: 306 TFMFATFIAVFTVDKAGRKPALKI 329
>XYLE_ECOLI (P09098) D-xylose-proton symporter (D-xylose
transporter)
Length = 491
Score = 117 bits (293), Expect = 9e-26
Identities = 78/234 (33%), Positives = 123/234 (52%), Gaps = 31/234 (13%)
Query: 7 VAVAAAIGNLLQGWDNATIAGSILYIKREF---QLQSEPTVEGLI---VAMSLIGATVVT 60
+ + A +G LL G+D A I+G++ + F Q SE L+ VA +LIG +
Sbjct: 13 ITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGG 72
Query: 61 TCSGALSDLFGRRPMLIISSLLYFLSSLVMFW--------SPN----VYI------LLFA 102
G S+ FGRR L I+++L+F+S + W +P+ VY+ +
Sbjct: 73 ALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY 132
Query: 103 RLLDGLGIGLAVTLVPLYISEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVF------GMS 156
R++ G+G+GLA L P+YI+E+AP IRG L + QFA G YC+ + S
Sbjct: 133 RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDAS 192
Query: 157 LTKAPSWRLMLGVLSIPSLIYFALTLLLLPESPRWLVSKGRMLEAKKVLQRLRG 210
WR M IP+L+ F + L +PESPRWL+S+G+ +A+ +L+++ G
Sbjct: 193 WLNTDGWRYMFASECIPALL-FLMLLYTVPESPRWLMSRGKQEQAEGILRKIMG 245
Score = 40.4 bits (93), Expect = 0.014
Identities = 24/74 (32%), Positives = 38/74 (50%), Gaps = 10/74 (13%)
Query: 519 LFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSSTSSSFLISAVTTLLMLP 578
+ +GV L I QQF GIN VLYY P++ + G +ST + L + + ++ L
Sbjct: 278 IVIGVMLSIFQQFVGINVVLYYAPEVFKTLG----------ASTDIALLQTIIVGVINLT 327
Query: 579 CIAVAMRLMDISGR 592
+A+ +D GR
Sbjct: 328 FTVLAIMTVDKFGR 341
>GLCP_SYNY3 (P15729) Glucose transport protein
Length = 468
Score = 115 bits (288), Expect = 3e-25
Identities = 71/217 (32%), Positives = 126/217 (57%), Gaps = 14/217 (6%)
Query: 5 VIVAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSG 64
++++ AA+G L G+D A I G++ +++ FQ S T GL V+++L+G+ + +G
Sbjct: 18 LLISGVAALGGFLFGFDTAVINGAVAALQKHFQTDSLLT--GLSVSLALLGSALGAFGAG 75
Query: 65 ALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEI 124
++D GR +I++++L+ LSS+ ++ +F R+L G+G+G A + P YI+E+
Sbjct: 76 PIADRHGRIKTMILAAVLFTLSSIGSGLPFTIWDFIFWRVLGGIGVGAASVIAPAYIAEV 135
Query: 125 APPEIRGSLNTLPQFAGSAGMF-------FSYCMVFGMS----LTKAPSWRLMLGVLSIP 173
+P +RG L +L Q A +G+F F M G + L A +WR M IP
Sbjct: 136 SPAHLRGRLGSLQQLAIVSGIFIALLSNWFIALMAGGSAQNPWLFGAAAWRWMFWTELIP 195
Query: 174 SLIYFALTLLLLPESPRWLVSKGRMLEAKKVLQRLRG 210
+L+Y + L+PESPR+LV++G+ +A +L ++ G
Sbjct: 196 ALLY-GVCAFLIPESPRYLVAQGQGEKAAAILWKVEG 231
Score = 40.8 bits (94), Expect = 0.011
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 438 YLHQEGGPGSIRASVVSLPGGDVPTDGDVVQQAAALVSQPALYNKELMHQQPVGPAMIHP 497
YL +G A + + GGDVP+ + +Q +L +P +L+ ++
Sbjct: 212 YLVAQGQGEKAAAILWKVEGGDVPSRIEEIQATVSLDHKPRF--SDLLSRRG-------- 261
Query: 498 SETAAKGPSWNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNL 557
G+ +++G+GL LQQF GIN + YY+ + G
Sbjct: 262 ----------------GLLPIVWIGMGLSALQQFVGINVIFYYSSVLWRSVGF------- 298
Query: 558 GLSSTSSSFLISAVTTLLMLPCIAVAMRLMDISGR 592
+ S LI+ +T + + VA+ +D GR
Sbjct: 299 ---TEEKSLLITVITGFINILTTLVAIAFVDKFGR 330
>ITR2_YEAST (P30606) Myo-inositol transporter 2
Length = 612
Score = 111 bits (278), Expect = 5e-24
Identities = 63/206 (30%), Positives = 116/206 (55%), Gaps = 7/206 (3%)
Query: 5 VIVAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEG---LIVAMSLIGATVVTT 61
+ + A+I + G+D I+ +++ I R+ L ++ G LI A + +GA + +
Sbjct: 113 ITLTFVASISGFMFGYDTGYISSALISINRD--LDNKVLTYGEKELITAATSLGALITSV 170
Query: 62 CSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYI 121
+G +D+FGRRP L+ S+L++ + +++ + + + RL+ G G+G+ + PL+I
Sbjct: 171 GAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFI 230
Query: 122 SEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALT 181
SEIAP IRG L + + G +Y G++ K WR+++G+ IP+++ F+
Sbjct: 231 SEIAPKMIRGRLTVINSLWLTGGQLIAYGCGAGLNHVK-NGWRILVGLSLIPTVLQFSF- 288
Query: 182 LLLLPESPRWLVSKGRMLEAKKVLQR 207
LP++PR+ V KG + AK VL+R
Sbjct: 289 FCFLPDTPRYYVMKGDLKRAKMVLKR 314
Score = 38.9 bits (89), Expect = 0.040
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 15/81 (18%)
Query: 507 WNDLFE----PGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSST 562
WN + E P AL +G GLQ +QQF+G N ++Y++ I E G +S+
Sbjct: 348 WNMVKELHTVPSNFRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGF--------KNSS 399
Query: 563 SSSFLISA---VTTLLMLPCI 580
+ S ++S V TL+ CI
Sbjct: 400 AVSIIVSGTNFVFTLIAFFCI 420
>ITR1_SCHPO (Q10286) Myo-inositol transporter 1
Length = 575
Score = 111 bits (278), Expect = 5e-24
Identities = 69/206 (33%), Positives = 114/206 (54%), Gaps = 7/206 (3%)
Query: 6 IVAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEG---LIVAMSLIGATVVTTC 62
++A AA IG LL G+D I+G+++ I L G I + + +GA +
Sbjct: 89 VLAFAAGIGGLLFGYDTGVISGALVVIGTS--LGGHELTNGGKEFITSATSLGALLGGII 146
Query: 63 SGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYIS 122
+GAL+D FGR+P++ I+S++ + S+V + +++ ++ R + G G+G+A ++PLY+S
Sbjct: 147 AGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLS 206
Query: 123 EIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTL 182
EIAP +IRG L + +AG +Y + WR M+G+ +P+ + L
Sbjct: 207 EIAPSKIRGRLVIIYVLLITAGQVIAYGIDTAFEHVH-NGWRWMVGLAMVPAAFQLFI-L 264
Query: 183 LLLPESPRWLVSKGRMLEAKKVLQRL 208
+ LPESPR LV K R EA L R+
Sbjct: 265 IWLPESPRLLVKKERSQEAYNTLARI 290
Score = 39.7 bits (91), Expect = 0.024
Identities = 25/84 (29%), Positives = 40/84 (46%), Gaps = 12/84 (14%)
Query: 511 FEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSSTSSSFLISA 570
F P AL + GLQ +QQ SG N ++Y++ I E G + T++ +I+A
Sbjct: 331 FNPSNFRALILACGLQAMQQLSGFNSLMYFSSTIFEVVGFN--------NPTATGLIIAA 382
Query: 571 VTTLLMLPCIAVAMRLMDISGRSI 594
+ + VA ++D GR I
Sbjct: 383 TNFVFTI----VAFGVIDFFGRRI 402
>HXTA_YEAST (P54862) Hexose transporter HXT11 (Low-affinity glucose
transporter LGT3)
Length = 567
Score = 108 bits (271), Expect = 3e-23
Identities = 76/229 (33%), Positives = 116/229 (50%), Gaps = 14/229 (6%)
Query: 6 IVAVAAAIGNLLQGWDNATIAGSIL---YIKREFQLQSEPTVE------GLIVAMSLIGA 56
I+ + A G + GWD TI+G + +I+R Q + T GLIV++ IG
Sbjct: 63 ILCLMIAFGGFIFGWDTGTISGFVNLSDFIRRFGQKNDKGTYYLSKVRMGLIVSIFNIGC 122
Query: 57 TVVTTCSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLF-ARLLDGLGIGLAVT 115
+ + D++GRR LI + +Y + L+ S N + F R++ GLG+G
Sbjct: 123 AIGGIVLSKVGDIYGRRIGLITVTAIYVVGILIQITSINKWYQYFIGRIISGLGVGGIAV 182
Query: 116 LVPLYISEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFG-MSLTKAPSWRLMLGVLSIPS 174
L P+ ISE+AP IRG+L L Q G+ G+F YC +G + A WR+ LG L
Sbjct: 183 LSPMLISEVAPKHIRGTLVQLYQLMGTMGIFLGYCTNYGTKNYHNATQWRVGLG-LCFAW 241
Query: 175 LIYFALTLLLLPESPRWLVSKGRMLEAKKVLQRLRGCQDVAGEMALLVE 223
+ ++ +PESPR+L+ G+ EAK+ L + + ALLVE
Sbjct: 242 ATFMVSGMMFVPESPRYLIEVGKDEEAKRSLSKSNKVS--VDDPALLVE 288
Score = 31.6 bits (70), Expect = 6.4
Identities = 18/54 (33%), Positives = 26/54 (47%), Gaps = 2/54 (3%)
Query: 499 ETAAKGPSWNDLFEPGVK--HALFVGVGLQILQQFSGINGVLYYTPQILEQAGV 550
E A SW++L K + +GV +Q LQQ +G N YY I + G+
Sbjct: 299 EKLAGNASWSELLSTKTKVFQRVLMGVMIQSLQQLTGDNYFFYYGTTIFKSVGL 352
>HXT1_YEAST (P32465) Low-affinity glucose transporter HXT1
Length = 570
Score = 107 bits (267), Expect = 9e-23
Identities = 70/217 (32%), Positives = 111/217 (50%), Gaps = 12/217 (5%)
Query: 6 IVAVAAAIGNLLQGWDNATIAGSILYIK--REFQLQSEPTVE-------GLIVAMSLIGA 56
I V A G + GWD TI+G + R F ++ GLIV++ IG
Sbjct: 67 ICCVMVAFGGFIFGWDTGTISGFVAQTDFLRRFGMKHHDGSHYLSKVRTGLIVSIFNIGC 126
Query: 57 TVVTTCSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLF-ARLLDGLGIGLAVT 115
+ L D++GRR LI+ ++Y + ++ S N + F R++ GLG+G
Sbjct: 127 AIGGIVLAKLGDMYGRRIGLIVVVVIYTIGIIIQIASINKWYQYFIGRIISGLGVGGITV 186
Query: 116 LVPLYISEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFG-MSLTKAPSWRLMLGVLSIPS 174
L P+ ISE+AP E+RG+L + Q + G+F YC FG + + + WR+ LG L
Sbjct: 187 LSPMLISEVAPSEMRGTLVSCYQVMITLGIFLGYCTNFGTKNYSNSVQWRVPLG-LCFAW 245
Query: 175 LIYFALTLLLLPESPRWLVSKGRMLEAKKVLQRLRGC 211
++ ++ +PESPR+LV GR+ EA+ L ++ C
Sbjct: 246 ALFMIGGMMFVPESPRYLVEAGRIDEARASLAKVNKC 282
Score = 32.3 bits (72), Expect = 3.8
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 501 AAKGPSWNDLF--EPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGV 550
AA SW +LF +P + +G+ +Q LQQ +G N YY + + G+
Sbjct: 305 AAGTASWGELFTGKPAMFQRTMMGIMIQSLQQLTGDNYFFYYGTIVFQAVGL 356
>HXT9_YEAST (P40885) Hexose transporter HXT9
Length = 567
Score = 105 bits (262), Expect = 3e-22
Identities = 70/213 (32%), Positives = 110/213 (50%), Gaps = 12/213 (5%)
Query: 6 IVAVAAAIGNLLQGWDNATIAGSIL---YIKREFQLQSEPTVE------GLIVAMSLIGA 56
I+ + A G + GWD TI+G + +I+R Q + T GLIV++ IG
Sbjct: 63 ILCLMIAFGGFIFGWDTGTISGFVNLSDFIRRFGQKNDKGTYYLSKVRMGLIVSIFNIGC 122
Query: 57 TVVTTCSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLF-ARLLDGLGIGLAVT 115
+ + D++GRR LI + +Y + L+ S N + F R++ GLG+G
Sbjct: 123 AIGGIVLSKVGDIYGRRIGLITVTAIYVVGILIQITSINKWYQYFIGRIISGLGVGGIAV 182
Query: 116 LVPLYISEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFG-MSLTKAPSWRLMLGVLSIPS 174
L P+ ISE+AP +IRG+L L Q + G+F YC +G + A WR+ LG L
Sbjct: 183 LSPMLISEVAPKQIRGTLVQLYQLMCTMGIFLGYCTNYGTKNYHNATQWRVGLG-LCFAW 241
Query: 175 LIYFALTLLLLPESPRWLVSKGRMLEAKKVLQR 207
+ ++ +PESPR+L+ G+ EAK+ L +
Sbjct: 242 TTFMVSGMMFVPESPRYLIEVGKDEEAKRSLSK 274
Score = 31.6 bits (70), Expect = 6.4
Identities = 18/54 (33%), Positives = 26/54 (47%), Gaps = 2/54 (3%)
Query: 499 ETAAKGPSWNDLFEPGVK--HALFVGVGLQILQQFSGINGVLYYTPQILEQAGV 550
E A SW++L K + +GV +Q LQQ +G N YY I + G+
Sbjct: 299 EKLAGNASWSELLSTKTKVFQRVLMGVMIQSLQQLTGDNYFFYYGTTIFKSVGL 352
>HXT2_YEAST (P23585) High-affinity glucose transporter HXT2
Length = 541
Score = 105 bits (262), Expect = 3e-22
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 12/214 (5%)
Query: 5 VIVAVAAAIGNLLQGWDNATIAGSILY--IKREF-QLQSEPTV------EGLIVAMSLIG 55
+ + + A G + GWD TI+G + KR F Q++S+ T GLIV + IG
Sbjct: 57 ICLCLMIAFGGFVFGWDTGTISGFVNQTDFKRRFGQMKSDGTYYLSDVRTGLIVGIFNIG 116
Query: 56 ATVVTTCSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLF-ARLLDGLGIGLAV 114
G L D++GRR L+ L+Y + ++ S + + F R++ G+G+G
Sbjct: 117 CAFGGLTLGRLGDMYGRRIGLMCVVLVYIVGIVIQIASSDKWYQYFIGRIISGMGVGGIA 176
Query: 115 TLVPLYISEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFG-MSLTKAPSWRLMLGVLSIP 173
L P ISE AP IRG+ + Q + G+F YC +G + + WR+ LG L+
Sbjct: 177 VLSPTLISETAPKHIRGTCVSFYQLMITLGIFLGYCTNYGTKDYSNSVQWRVPLG-LNFA 235
Query: 174 SLIYFALTLLLLPESPRWLVSKGRMLEAKKVLQR 207
I+ +L++PESPR+LV KGR +AK+ L +
Sbjct: 236 FAIFMIAGMLMVPESPRFLVEKGRYEDAKRSLAK 269
Score = 32.7 bits (73), Expect = 2.9
Identities = 26/97 (26%), Positives = 40/97 (40%), Gaps = 14/97 (14%)
Query: 498 SETAAKGPSWNDLF--EPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLS 555
+E A SW +LF + + + +G+ +Q LQQ +G N YY I G+
Sbjct: 293 TERLAGNASWGELFSNKGAILPRVIMGIMIQSLQQLTGNNYFFYYGTTIFNAVGM----- 347
Query: 556 NLGLSSTSSSFLISAVTTLLMLPCIAVAMRLMDISGR 592
SF S V ++ VA+ +D GR
Sbjct: 348 -------KDSFQTSIVLGIVNFASTFVALYTVDKFGR 377
>KHT2_KLULA (P53387) Hexose transporter 2
Length = 566
Score = 103 bits (258), Expect = 1e-21
Identities = 79/248 (31%), Positives = 127/248 (50%), Gaps = 19/248 (7%)
Query: 6 IVAVAAAIGNLLQGWDNATIAGSIL---YIKREFQLQSEPTV------EGLIVAMSLIGA 56
I+ + A G + GWD TI+G + +I+R Q +++ + GLIV++ IG
Sbjct: 64 ILCLMVAFGGFVFGWDTGTISGFVNQTDFIRRFGQEKADGSHYLSNVRTGLIVSIFNIGC 123
Query: 57 TVVTTCSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLF-ARLLDGLGIGLAVT 115
+ L D++GRR L+I L+Y + ++ S + + F R++ GLG+G
Sbjct: 124 AIGGIILSKLGDMYGRRIGLMIVVLIYVVGIIIQIASIDKWYQYFIGRIISGLGVGGISV 183
Query: 116 LVPLYISEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFG-MSLTKAPSWRLMLGVLSIPS 174
L P+ ISE AP IRG+L + Q + G+F YC +G + + + WR+ LG L
Sbjct: 184 LSPMLISETAPKHIRGTLVSFYQLMITFGIFLGYCTNYGTKTYSNSVQWRVPLG-LCFAW 242
Query: 175 LIYFALTLLLLPESPRWLVSKGRMLEAKKVLQRLRGCQ----DVAGEMALL---VEGLGV 227
I+ +L +PESPR+LV K R+ EAK+ + + V E+ L+ VE +
Sbjct: 243 AIFMITGMLFVPESPRFLVEKDRIDEAKRSIAKSNKVSYEDPAVQAEVDLICAGVEAERL 302
Query: 228 GGDTSIEE 235
G SI+E
Sbjct: 303 AGSASIKE 310
>HXT4_YEAST (P32467) Low-affinity glucose transporter HXT4
(Low-affinity glucose transporter LGT1)
Length = 576
Score = 102 bits (255), Expect = 2e-21
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 12/209 (5%)
Query: 6 IVAVAAAIGNLLQGWDNATIAGSIL---YIKREFQLQSEPTV------EGLIVAMSLIGA 56
I + A G + GWD TI+G + +I+R + T GLIV++ IG
Sbjct: 73 ICCLMVAFGGFVFGWDTGTISGFVAQTDFIRRFGMKHHDGTYYLSKVRTGLIVSIFNIGC 132
Query: 57 TVVTTCSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLF-ARLLDGLGIGLAVT 115
+ L D++GR+ LI+ ++Y + ++ S N + F R++ GLG+G
Sbjct: 133 AIGGIILAKLGDMYGRKMGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAV 192
Query: 116 LVPLYISEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFG-MSLTKAPSWRLMLGVLSIPS 174
L P+ ISE++P IRG+L + Q + G+F YC +G + T + WR+ LG L
Sbjct: 193 LSPMLISEVSPKHIRGTLVSCYQLMITLGIFLGYCTNYGTKTYTNSVQWRVPLG-LGFAW 251
Query: 175 LIYFALTLLLLPESPRWLVSKGRMLEAKK 203
++ + +PESPR+LV G++ EAK+
Sbjct: 252 ALFMIGGMTFVPESPRYLVEVGKIEEAKR 280
Score = 32.0 bits (71), Expect = 4.9
Identities = 26/105 (24%), Positives = 49/105 (45%), Gaps = 6/105 (5%)
Query: 468 QQAAALVSQPALYNKELMHQQPVGPAMIHPSETAAKGPSWNDLFEPGVK--HALFVGVGL 525
+++ AL ++ + + +M + V A + +E A SW ++F K L +G +
Sbjct: 279 KRSIALSNKVSADDPAVMAEVEVVQATVE-AEKLAGNASWGEIFSTKTKVFQRLIMGAMI 337
Query: 526 QILQQFSGINGVLYYTPQILEQAGVGYLLSN---LGLSSTSSSFL 567
Q LQQ +G N YY + G+ LG+ + +S+F+
Sbjct: 338 QSLQQLTGDNYFFYYGTTVFTAVGLEDSFETSIVLGIVNFASTFV 382
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,399,030
Number of Sequences: 164201
Number of extensions: 3513669
Number of successful extensions: 9380
Number of sequences better than 10.0: 294
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 8713
Number of HSP's gapped (non-prelim): 493
length of query: 616
length of database: 59,974,054
effective HSP length: 116
effective length of query: 500
effective length of database: 40,926,738
effective search space: 20463369000
effective search space used: 20463369000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Medicago: description of AC121239.3