BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121238.1 + phase: 0
(533 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MOC_ORYSA (Q84MM9) Protein MONOCULM 1 97 1e-19
FXP2_GORGO (Q8MJ99) Forkhead box protein P2 37 0.098
IXR1_YEAST (P33417) Intrastrand crosslink recognition protein (S... 37 0.17
FXP2_HUMAN (O15409) Forkhead box protein P2 (CAG repeat protein ... 36 0.29
NPBL_CAEEL (Q95XZ5) Nipped-B-like protein pqn-85 (Prion-like-(Q/... 35 0.49
LUMI_ARATH (Q38796) Homeobox protein LUMINIDEPENDENS 35 0.49
HMD1_DICDI (P34135) 3-hydroxy-3-methylglutaryl-coenzyme A reduct... 35 0.49
FXP2_PANTR (Q8MJA0) Forkhead box protein P2 35 0.49
FXP2_PANPA (Q8HZ00) Forkhead box protein P2 35 0.49
YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4... 35 0.64
RNQ1_YEAST (P25367) [PIN+] prion protein RNQ1 (Rich in asparagin... 35 0.64
FXP2_PONPY (Q8MJ98) Forkhead box protein P2 35 0.64
FXP2_MACMU (Q8MJ97) Forkhead box protein P2 35 0.64
ERK1_CANAL (P28869) Extracellular signal-regulated kinase 1 (EC ... 35 0.64
ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs) 35 0.64
TBP_MESAU (P53360) TATA-box binding protein (TATA-box factor) (T... 34 0.83
RAG8_KLULA (P40230) Casein kinase I homolog RAG8 (EC 2.7.1.-) 34 0.83
FXP2_MOUSE (P58463) Forkhead box protein P2 34 0.83
BM2K_MOUSE (Q91Z96) BMP-2 inducible protein kinase (EC 2.7.1.37)... 34 0.83
AKH2_MAIZE (P49080) Bifunctional aspartokinase/homoserine dehydr... 34 0.83
>MOC_ORYSA (Q84MM9) Protein MONOCULM 1
Length = 441
Score = 97.1 bits (240), Expect = 1e-19
Identities = 96/396 (24%), Positives = 170/396 (42%), Gaps = 49/396 (12%)
Query: 176 DQLFKTAELIEAGN-PVQAQGILARLNHQLSPIGNPFQRASFYMKEALQLMLHSNGNN-- 232
D L A+L++ G+ P + L SP G+ R +++ AL L + + +
Sbjct: 52 DLLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGH 111
Query: 233 LTAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQSLIEALERFDRIHVIDFDIGFGVQW 292
+ + GAY +F++I+P L+FA+ T NQ+++EA++ R+H++D D GVQW
Sbjct: 112 VVVGGGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQW 171
Query: 293 SSFMQEIVLRSN---GKPSLKITAVVSPSSCNEIELNFTQENLSQYAKDLNILFEFNVLN 349
+Q I R++ G P +++T + + L T L +A+ +++ F F L
Sbjct: 172 PPLLQAIAERADPALGPPEVRVTG----AGADRDTLLRTGNRLRAFARSIHLPFHFTPLL 227
Query: 350 IESLNL-----------------PSCPLPGHFFDSNEAIGVNFPVSSFISNPSCFPVALH 392
+ + G F +E + VN + F+ N +
Sbjct: 228 LSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVM--FLHNLAGHDELAA 285
Query: 393 FLKQLR---PKIVVTLDKNC-------DRMDVPLPTNVVHVLQCYSALLESLDAV----- 437
FLK ++ P +V ++ D +D LP V + YSA+ E+L+A
Sbjct: 286 FLKWVKAMSPAVVTIAEREAGGGGGGGDHID-DLPRRVGVAMDHYSAVFEALEATVPPGS 344
Query: 438 NVNLDVLQKIERHYIQPTINKIVLSHHNQRDKLPPWRNMFLQSGFSPFSFSNFTEAQAEC 497
L V Q++ I+ + S + W +GF+ S F +QA
Sbjct: 345 RERLAVEQEVLGREIEAAVGP---SGGRWWRGIERWGGAARAAGFAARPLSAFAVSQARL 401
Query: 498 LVQ-RAPVRGFQVERKPSSLVLCWQRKELISVSTWR 532
L++ P G+ V+ + L WQ + L+SVS W+
Sbjct: 402 LLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQ 437
>FXP2_GORGO (Q8MJ99) Forkhead box protein P2
Length = 713
Score = 37.4 bits (85), Expect = 0.098
Identities = 35/130 (26%), Positives = 50/130 (37%), Gaps = 5/130 (3%)
Query: 74 VLDHQQQQGLTMMDASV--QQGNYNVFPFIPENYNVLPLLDSGQEVFARRHQQQETQLPL 131
VL QQ Q L +V QQ F + L LL Q+ ++ QQQ+ Q
Sbjct: 112 VLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQ 171
Query: 132 FPHHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQSIFDQLFKTAELIEAGN-- 189
Q QQQQQQ KQ K + QQ +F Q + ++
Sbjct: 172 QQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHL 231
Query: 190 -PVQAQGILA 198
+Q QG+++
Sbjct: 232 LSLQRQGLIS 241
>IXR1_YEAST (P33417) Intrastrand crosslink recognition protein
(Structure-specific recognition protein) (SSRP)
Length = 597
Score = 36.6 bits (83), Expect = 0.17
Identities = 22/58 (37%), Positives = 34/58 (57%), Gaps = 5/58 (8%)
Query: 115 QEVFARRHQQQETQLPLFPHHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQ 172
Q+ ++HQ Q+ Q HH+LQ QQQQQQ VV +K+SS+ + + QL++
Sbjct: 306 QQQLQQQHQLQQQQQLQQQHHHLQQQQQQQQHPVV-----KKLSSTQSRIERRKQLKK 358
Score = 35.0 bits (79), Expect = 0.49
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 76 DHQ-QQQGLTMMDASVQQGNYNVFPFIPENY-NVLPLLDSGQEVFARRHQQQETQLPLFP 133
DH Q QGL D+ + ++ P Y N Q+ ++ QQQ+ Q P +
Sbjct: 23 DHSLQYQGLEHNDSQYRDASHQT----PHQYLNQFQAQPQQQQQQQQQQQQQQQQAP-YQ 77
Query: 134 HHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQ 172
H+ Q QQQQQ+ P Q ++ Q QQ
Sbjct: 78 GHFQQSPQQQQQNVYYPLPPQSLTQPTSQSQQQQQQQQQ 116
>FXP2_HUMAN (O15409) Forkhead box protein P2 (CAG repeat protein 44)
(Trinucleotide repeat-containing gene 10 protein)
Length = 715
Score = 35.8 bits (81), Expect = 0.29
Identities = 40/134 (29%), Positives = 52/134 (37%), Gaps = 12/134 (8%)
Query: 74 VLDHQQQQGLTMMDASV--QQGNYNVFPFIPENYNVLPLLDSGQEVFARRHQQQETQLPL 131
VL QQ Q L +V QQ F + L LL Q+ ++ QQQ+ Q
Sbjct: 112 VLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQ--- 168
Query: 132 FPHHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQSIFDQLFKTAELIEAGNPV 191
Q QQQQQQ +QQ+ G A Q QQ Q +L+ +
Sbjct: 169 ------QQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLL 222
Query: 192 QAQGILARLNHQLS 205
Q Q L + H LS
Sbjct: 223 QMQQ-LQQQQHLLS 235
>NPBL_CAEEL (Q95XZ5) Nipped-B-like protein pqn-85
(Prion-like-(Q/n-rich)-domain-bearing protein 85) (SCC2
homolog)
Length = 2203
Score = 35.0 bits (79), Expect = 0.49
Identities = 47/169 (27%), Positives = 67/169 (38%), Gaps = 19/169 (11%)
Query: 56 LQNSGYGSQNVDFH------GGFGVLDHQQQQGLTMMDASVQQGNYNVFPFIPENYNVLP 109
LQNS G+ N +F GGFG HQ Q A+ G YN + N
Sbjct: 6 LQNSLNGTGNPNFQPVQTNAGGFG---HQMAQ-TGAAAAAAATGQYNPMLLQQQYLNFGF 61
Query: 110 LLDSGQEVFARRHQQQETQLPLFPHHY----LQHQQQQQQSSVVPFAKQQKVSSSTTGDD 165
++ ++F + QQQ+ Q L L HQQQQQ ++ Q + T
Sbjct: 62 GMNYNNQLFDFQAQQQQQQQYLMQQQQQQQQLHHQQQQQHQNIAQPQAQHHQMNMFTQHQ 121
Query: 166 ASIQLQQSIFDQLFKTAELIEAGNPVQAQGILARLNHQLSP-IGNPFQR 213
+QQ Q + + I+ P+ AQ I H + P N FQ+
Sbjct: 122 MLQLMQQQQQQQQQQPVQQIQRQQPI-AQPI---PQHTIPPSTSNQFQQ 166
>LUMI_ARATH (Q38796) Homeobox protein LUMINIDEPENDENS
Length = 953
Score = 35.0 bits (79), Expect = 0.49
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 121 RHQQQETQLPLFPHHYLQHQQQQQQS-SVVPFAKQQKVSSSTTGDDASIQLQQS 173
R QQQ Q L HH L QQQQQQ S +A ++ V TG +S + QQS
Sbjct: 826 REQQQYMQPKL--HHNLHFQQQQQQPISTTSYAVREPVGQMGTGTSSSWRSQQS 877
>HMD1_DICDI (P34135) 3-hydroxy-3-methylglutaryl-coenzyme A reductase
1 (EC 1.1.1.34) (HMG-CoA reductase 1)
Length = 552
Score = 35.0 bits (79), Expect = 0.49
Identities = 25/82 (30%), Positives = 37/82 (44%), Gaps = 7/82 (8%)
Query: 97 VFPFIPENYNV------LPLLDSGQEVFARRHQQQETQLPLFPHHYLQHQQQQQQSSVVP 150
+FPF +N+ +P+L + V Q E LP P H Q QQQ+QQ S
Sbjct: 36 LFPFFKWGFNIRRSNFLVPILSNNVIVTGEEAVQYEKPLPYIPQHNQQ-QQQKQQPSQDY 94
Query: 151 FAKQQKVSSSTTGDDASIQLQQ 172
+ Q ++ +G + Q QQ
Sbjct: 95 IQQPQNDNNINSGKEQEQQQQQ 116
>FXP2_PANTR (Q8MJA0) Forkhead box protein P2
Length = 716
Score = 35.0 bits (79), Expect = 0.49
Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Query: 74 VLDHQQQQGLTMMDASVQQGNYNVFPFIPENYNVLPLLDSGQEVFARRHQQQETQLPLFP 133
VL QQ Q L +V + F + L L Q+ ++ QQQ+ Q
Sbjct: 112 VLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQ 171
Query: 134 HHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQSIFDQLFKTAELIEAGNPVQA 193
Q QQQQQQ +QQ+ G A Q QQ Q +L+ +Q
Sbjct: 172 QQQQQQQQQQQQQ------QQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQM 225
Query: 194 QGILARLNHQLS 205
Q L + H LS
Sbjct: 226 QQ-LQQQQHLLS 236
>FXP2_PANPA (Q8HZ00) Forkhead box protein P2
Length = 716
Score = 35.0 bits (79), Expect = 0.49
Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Query: 74 VLDHQQQQGLTMMDASVQQGNYNVFPFIPENYNVLPLLDSGQEVFARRHQQQETQLPLFP 133
VL QQ Q L +V + F + L L Q+ ++ QQQ+ Q
Sbjct: 112 VLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQ 171
Query: 134 HHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQSIFDQLFKTAELIEAGNPVQA 193
Q QQQQQQ +QQ+ G A Q QQ Q +L+ +Q
Sbjct: 172 QQQQQQQQQQQQQ------QQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQM 225
Query: 194 QGILARLNHQLS 205
Q L + H LS
Sbjct: 226 QQ-LQQQQHLLS 236
>YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4
intergenic region
Length = 738
Score = 34.7 bits (78), Expect = 0.64
Identities = 31/105 (29%), Positives = 42/105 (39%), Gaps = 9/105 (8%)
Query: 123 QQQETQLPLFPHHYLQHQQQQQQSSVVPFAKQQKVSSSTT---------GDDASIQLQQS 173
QQQ+ Q P P LQ QQQQQQ V A+ Q+ S QLQQ
Sbjct: 407 QQQQPQQPQQPQQQLQQQQQQQQQPVQAQAQAQEEQLSQNYYTQQQQQQYAQQQHQLQQQ 466
Query: 174 IFDQLFKTAELIEAGNPVQAQGILARLNHQLSPIGNPFQRASFYM 218
Q + A+ + Q+Q ++ + Q GN +YM
Sbjct: 467 YLSQQQQYAQQQQQHPQPQSQQPQSQQSPQSQKQGNNVAAQQYYM 511
>RNQ1_YEAST (P25367) [PIN+] prion protein RNQ1 (Rich in asparagine
and glutamine protein 1)
Length = 405
Score = 34.7 bits (78), Expect = 0.64
Identities = 34/123 (27%), Positives = 56/123 (44%), Gaps = 16/123 (13%)
Query: 51 GLNKILQNSGYGSQ---NVDFHGGFGVLDHQQQQGLTMMDASVQQGNYNVFPFIPENYNV 107
G N+ QN SQ N + GG G +QQQQG + G ++ + ++Y
Sbjct: 229 GYNQSYQNGNQNSQGYNNQQYQGGNG--GYQQQQGQS-------GGAFSSLASMAQSYLG 279
Query: 108 LPLLDSGQEVFARRHQQQETQLPLFPHHYLQHQ---QQQQQSSVVPFAKQQKVSSSTTGD 164
S Q+ + ++ Q + Q +Y QHQ QQQQQ F+ ++SS G+
Sbjct: 280 GGQTQSNQQQYNQQGQNNQQQYQQQGQNY-QHQQQGQQQQQGHSSSFSALASMASSYLGN 338
Query: 165 DAS 167
+++
Sbjct: 339 NSN 341
>FXP2_PONPY (Q8MJ98) Forkhead box protein P2
Length = 714
Score = 34.7 bits (78), Expect = 0.64
Identities = 33/131 (25%), Positives = 50/131 (37%), Gaps = 6/131 (4%)
Query: 74 VLDHQQQQGLTMMDASV---QQGNYNVFPFIPENYNVLPLLDSGQEVFARRHQQQETQLP 130
VL QQ Q L +V QQ + E ++ L Q+ ++ QQQ+ Q
Sbjct: 112 VLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQ 171
Query: 131 LFPHHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQSIFDQLFKTAELIEAGN- 189
Q QQQQQQ KQ K + QQ +F Q + ++
Sbjct: 172 QQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQH 231
Query: 190 --PVQAQGILA 198
+Q QG+++
Sbjct: 232 LLSLQRQGLIS 242
>FXP2_MACMU (Q8MJ97) Forkhead box protein P2
Length = 714
Score = 34.7 bits (78), Expect = 0.64
Identities = 33/131 (25%), Positives = 50/131 (37%), Gaps = 6/131 (4%)
Query: 74 VLDHQQQQGLTMMDASV---QQGNYNVFPFIPENYNVLPLLDSGQEVFARRHQQQETQLP 130
VL QQ Q L +V QQ + E ++ L Q+ ++ QQQ+ Q
Sbjct: 112 VLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQ 171
Query: 131 LFPHHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQSIFDQLFKTAELIEAGN- 189
Q QQQQQQ KQ K + QQ +F Q + ++
Sbjct: 172 QQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQH 231
Query: 190 --PVQAQGILA 198
+Q QG+++
Sbjct: 232 LLSLQRQGLIS 242
>ERK1_CANAL (P28869) Extracellular signal-regulated kinase 1 (EC
2.7.1.37) (ERK1) (MAP kinase 1) (MAPK 1)
Length = 417
Score = 34.7 bits (78), Expect = 0.64
Identities = 37/143 (25%), Positives = 63/143 (43%), Gaps = 18/143 (12%)
Query: 120 RRHQQQETQLPLFPHHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQSIFDQLF 179
++HQQQ Q Q Q QQQQ + A +++TT + Q+ ++ D +
Sbjct: 12 QQHQQQMLQQQAQAQAQAQAQAQQQQQAAAAAAAAN--AAATTSSSSPRQVSFNVSDH-Y 68
Query: 180 KTAELIEAGNPVQAQGILARLNHQLSPIG------NPFQRASFYMK--EALQLMLHSNGN 231
+ E++ G A GI+ H+ S PF+R+ ++ L+L+ H N
Sbjct: 69 QILEIVGEG----AYGIVCSAIHKPSQQKVAIKKIEPFERSMLCLRTLRELKLLKHFNHE 124
Query: 232 NLTAFSPISFIFKIGAYKSFSEI 254
N+ + I Y+SF+EI
Sbjct: 125 NIISILAIQRPIN---YESFNEI 144
>ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs)
Length = 1669
Score = 34.7 bits (78), Expect = 0.64
Identities = 38/137 (27%), Positives = 58/137 (41%), Gaps = 15/137 (10%)
Query: 110 LLDSGQEV---FARRHQQQETQLPLFPHHYLQ------HQQQQQQSSVVPFAKQQKVSSS 160
L+DS ++ F + Q+Q+ Q L LQ QQQQQQ +QQ SS+
Sbjct: 975 LVDSNGQIIGNFLLQQQRQQQQQQLLQQFTLQAAAAQQQQQQQQQHQQQQQQQQQATSSN 1034
Query: 161 TTGDDASIQLQQSIFDQLFKTAELIEAGNPVQAQGILARLNHQLSPIGNPFQRASFYMKE 220
+ G + L+ Q F + LI + Q Q L + Q + Q F +++
Sbjct: 1035 SLGKTLPVALRNG--TQQFLSPNLIAQQHQQQQQQQLEQHQQQATAQQKHQQIQQFALQQ 1092
Query: 221 A----LQLMLHSNGNNL 233
A QL+ + NNL
Sbjct: 1093 AQLHQRQLLAQAANNNL 1109
>TBP_MESAU (P53360) TATA-box binding protein (TATA-box factor) (TATA
binding factor) (TATA sequence-binding protein)
(Transcription initiation factor TFIID TBP subunit)
Length = 318
Score = 34.3 bits (77), Expect = 0.83
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 103 ENYNVLPLLDSGQEVFARRHQQQETQLPLFPHHYLQHQQQQQQSSVVPFAKQQKVSSSTT 162
+N N L +L+ Q R QQQ+ Q Q QQQQQQ+ A Q+ +S +
Sbjct: 44 QNTNSLSILEEQQ-----REQQQQQQ---------QQQQQQQQAVATAAASVQQSTSQQS 89
Query: 163 GDDASIQLQQSIFDQLFKTAEL 184
AS Q Q Q TA L
Sbjct: 90 TQGASGQTPQLFHSQTLTTAPL 111
>RAG8_KLULA (P40230) Casein kinase I homolog RAG8 (EC 2.7.1.-)
Length = 536
Score = 34.3 bits (77), Expect = 0.83
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 115 QEVFARRHQQQETQLPLFPHHYLQHQQQ-QQQSSVVPFAKQQKVSSSTTGDDASIQLQQS 173
Q++ +++ QQ TQ L P Y ++QQ QQ+ + P QQK S D + Q Q+
Sbjct: 440 QQIMSQQQYQQHTQQRLDPMSYEAYKQQVQQRYAQQPQPTQQKAQKSPNNDTSQQQFSQN 499
>FXP2_MOUSE (P58463) Forkhead box protein P2
Length = 714
Score = 34.3 bits (77), Expect = 0.83
Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 6/127 (4%)
Query: 74 VLDHQQQQGLTMMDASV--QQGNYNVFPFIPENYNVLPLLDSGQEVFARRHQQQETQLPL 131
VL QQ Q L +V QQ F + L LL Q+ ++ QQQ+ Q
Sbjct: 112 VLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQ--- 168
Query: 132 FPHHYLQHQQQQQQSSVVPFAKQQKVSSSTTGDDASIQLQQSIFDQLFKTAELIEAGNPV 191
Q QQQQQQ +QQ Q QQ QL +L++
Sbjct: 169 -QQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQLAAQQLVFQQQLLQMQQLQ 227
Query: 192 QAQGILA 198
Q Q +L+
Sbjct: 228 QQQHLLS 234
>BM2K_MOUSE (Q91Z96) BMP-2 inducible protein kinase (EC 2.7.1.37)
(BIKe)
Length = 1138
Score = 34.3 bits (77), Expect = 0.83
Identities = 23/76 (30%), Positives = 32/76 (41%), Gaps = 6/76 (7%)
Query: 102 PENYNVLPLLDSGQEVFARRHQQQETQLPLFPHHYLQHQQQQQQSSVVPFAKQQKVSSST 161
P+ + VL L G + Q+ L PHH+ Q QQQQQQ +QQ+
Sbjct: 428 PQQHRVLQQLQQGD------WRLQQLHLHRHPHHHHQQQQQQQQQQQQQQLQQQQQQQQQ 481
Query: 162 TGDDASIQLQQSIFDQ 177
+A +Q Q Q
Sbjct: 482 LLQNAYLQQYQHAMHQ 497
>AKH2_MAIZE (P49080) Bifunctional aspartokinase/homoserine
dehydrogenase 2, chloroplast precursor (AK-HD 2)
(AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4);
Homoserine dehydrogenase (EC 1.1.1.3)]
Length = 917
Score = 34.3 bits (77), Expect = 0.83
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 283 DFDIGFGVQWSSFMQEIVLRSNGKP----SLKITAVVSPSSCNEIELNFTQ 329
DF +G G WS+ M ++ +G P + VV+PS CN+++ ++ +
Sbjct: 207 DFVVGHGELWSAQMLSYAIKKSGAPCSWMDTREVLVVTPSGCNQVDPDYLE 257
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,245,944
Number of Sequences: 164201
Number of extensions: 2658681
Number of successful extensions: 9027
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 8096
Number of HSP's gapped (non-prelim): 334
length of query: 533
length of database: 59,974,054
effective HSP length: 115
effective length of query: 418
effective length of database: 41,090,939
effective search space: 17176012502
effective search space used: 17176012502
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC121238.1