BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121237.5 + phase: 2 /pseudo
(194 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RADI_MOUSE (P26043) Radixin (ESP10) 42 9e-04
CALD_CHICK (P12957) Caldesmon (CDM) 41 0.002
TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protei... 40 0.003
CAFA_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-1... 40 0.003
RADI_CHICK (Q9PU45) Radixin 40 0.004
CAFA_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1... 40 0.004
RADI_HUMAN (P35241) Radixin 39 0.006
CDL2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC2... 39 0.006
CDL1_HUMAN (P21127) PITSLRE serine/threonine-protein kinase CDC2... 39 0.006
TRHY_SHEEP (P22793) Trichohyalin 39 0.008
RADI_PIG (P26044) Radixin (Moesin B) 39 0.008
HMMR_HUMAN (O75330) Hyaluronan mediated motility receptor (Intra... 38 0.017
Y5G8_ENCCU (Q8STA9) Hypothetical protein ECU05_1680/ECU11_0050 37 0.022
MNN4_YEAST (P36044) MNN4 protein 37 0.022
C190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 1... 37 0.022
CAC1_YEAST (Q12495) Chromatin assembly factor 1 p90 subunit (CAF... 37 0.029
IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B ... 37 0.038
GARP_PLAFF (P13816) Glutamic acid-rich protein precursor 37 0.038
BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot... 36 0.064
YNJ1_YEAST (P53935) Hypothetical 141.5 kDa protein in YPT53-RHO2... 35 0.084
>RADI_MOUSE (P26043) Radixin (ESP10)
Length = 583
Score = 42.0 bits (97), Expect = 9e-04
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 50 KTKKKQVKDEL-DRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAI 108
K + ++ K+EL +RL+Q E++ + +K L ELE+++Q+ KEE +RLD E A
Sbjct: 337 KERIEREKEELMERLRQIEEQTVKAQKELEEQTRKALELEQERQRAKEEAERLDRERRAA 396
Query: 109 AEA 111
EA
Sbjct: 397 EEA 399
>CALD_CHICK (P12957) Caldesmon (CDM)
Length = 771
Score = 41.2 bits (95), Expect = 0.002
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 42 K*GQQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRL 101
K ++ A+ K+++ +E +R K E+K+ EKA E EK K+KKK E+++
Sbjct: 354 KAAEERAKAEKERKAAEERERAKAEEEKRAAEEKARL-------EAEKLKEKKKMEEKKA 406
Query: 102 DEEGAAIAEAVALHVLLDEDSDDSYKVECK 131
EE A ++L ++ D KVE K
Sbjct: 407 QEEKA------QANLLRKQEEDKEAKVEAK 430
Score = 35.4 bits (80), Expect = 0.084
Identities = 22/66 (33%), Positives = 37/66 (55%), Gaps = 1/66 (1%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
++ A K ++K +E +RLK E+KK EK A +E E+++ K +EE++ +E
Sbjct: 245 KEEAEKEREKLEAEEKERLKAEEEKKAAEEKQKAEEEKKAAE-ERERAKAEEEKRAAEER 303
Query: 105 GAAIAE 110
A AE
Sbjct: 304 ERAKAE 309
Score = 31.6 bits (70), Expect = 1.2
Identities = 18/63 (28%), Positives = 35/63 (54%), Gaps = 9/63 (14%)
Query: 50 KTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAIA 109
K K+++ ELD LK+ +++R++ + E +KKKQ++ E + R +EE +
Sbjct: 514 KEKQQEAAVELDELKKRREERRKI---------LEEEEQKKKQEEAERKIREEEEKKRMK 564
Query: 110 EAV 112
E +
Sbjct: 565 EEI 567
Score = 31.2 bits (69), Expect = 1.6
Identities = 17/69 (24%), Positives = 36/69 (51%)
Query: 42 K*GQQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRL 101
K ++ + ++K+ +E +R K E+K+ E+ A + E++++ K EE+++
Sbjct: 270 KAAEEKQKAEEEKKAAEERERAKAEEEKRAAEERERAKAEEERKAAEERERAKAEEERKA 329
Query: 102 DEEGAAIAE 110
EE A E
Sbjct: 330 AEERAKAEE 338
Score = 29.3 bits (64), Expect = 6.0
Identities = 11/59 (18%), Positives = 38/59 (63%), Gaps = 1/59 (1%)
Query: 49 RKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAA 107
R+ +++++ +E ++ K+ E+ +R++ + + E+E+++ + E++Q++ E+G +
Sbjct: 530 RREERRKILEEEEQKKKQEEAERKIREE-EEKKRMKEEIERRRAEAAEKRQKVPEDGVS 587
>TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protein (EC
6.3.2.-)
Length = 4065
Score = 40.4 bits (93), Expect = 0.003
Identities = 22/72 (30%), Positives = 39/72 (53%)
Query: 52 KKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAIAEA 111
++K K E DR + E+KKR+ E+ A E +++K+ EE++RL+ E A A
Sbjct: 2846 EEKARKAEADRKAEEERKKRQEEERKKREAKEAEEKAAREKKEAEERERLERERAEAAAQ 2905
Query: 112 VALHVLLDEDSD 123
A D++++
Sbjct: 2906 AAAQAAADQEAN 2917
>CAFA_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-1
subunit A) (Chromatin assembly factor I p150 subunit)
(CAF-I 150 kDa subunit) (CAF-Ip150)
Length = 911
Score = 40.0 bits (92), Expect = 0.003
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 50 KTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAIA 109
K K+++ K E D ++AEK++ + EK A+ ++LE+K+ KKEE++RL EE +
Sbjct: 354 KEKERREKREKDEKEKAEKQRLKEEKRKERQEALEAKLEEKR--KKEEEKRLREEEKRLR 411
Query: 110 E 110
E
Sbjct: 412 E 412
Score = 37.0 bits (84), Expect = 0.029
Identities = 19/56 (33%), Positives = 35/56 (61%), Gaps = 2/56 (3%)
Query: 49 RKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
++ +K+++++E+ R K+ +KK+ EK L E +K +K+K E+QRL EE
Sbjct: 325 QREEKEKLREEIRRAKEEARKKKEEEKELKEKER--REKREKDEKEKAEKQRLKEE 378
>RADI_CHICK (Q9PU45) Radixin
Length = 583
Score = 39.7 bits (91), Expect = 0.004
Identities = 22/65 (33%), Positives = 41/65 (62%), Gaps = 1/65 (1%)
Query: 50 KTKKKQVKDEL-DRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAI 108
K + ++ K+EL +RL+Q E++ + +K L EL++++++ KEE +RL++E A
Sbjct: 337 KERIEREKEELMERLRQIEEQTMKAQKELEEQTRRALELDQERKRAKEEAERLEKERRAA 396
Query: 109 AEAVA 113
EA A
Sbjct: 397 EEAKA 401
>CAFA_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1
subunit A) (Chromatin assembly factor I p150 subunit)
(CAF-I 150 kDa subunit) (CAF-Ip150)
Length = 938
Score = 39.7 bits (91), Expect = 0.004
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 48 ARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
A + +K+++K+E R K+ KKK+ EK L E +K +K+K E+QRL EE
Sbjct: 334 AEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKER--REKREKDEKEKAEKQRLKEE 388
Score = 38.1 bits (87), Expect = 0.013
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 50 KTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
K K+++ K E D ++AEK++ + E+ A+ ++LE+K+ KKEE++RL EE
Sbjct: 364 KEKERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKR--KKEEEKRLREE 416
>RADI_HUMAN (P35241) Radixin
Length = 583
Score = 39.3 bits (90), Expect = 0.006
Identities = 22/63 (34%), Positives = 40/63 (62%), Gaps = 1/63 (1%)
Query: 50 KTKKKQVKDEL-DRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAI 108
K + ++ K+EL +RLKQ E++ + +K L EL++++++ KEE +RL++E A
Sbjct: 337 KERIEREKEELMERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAA 396
Query: 109 AEA 111
EA
Sbjct: 397 EEA 399
>CDL2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC2L2
(EC 2.7.1.37) (Galactosyltransferase associated protein
kinase p58/GTA) (Cell division cycle 2-like 2) (CDK11)
Length = 780
Score = 39.3 bits (90), Expect = 0.006
Identities = 28/92 (30%), Positives = 48/92 (51%), Gaps = 13/92 (14%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDE- 103
+Q R+ ++ + E DRL+Q E+K+ R K + E +K+++++KE ++R +E
Sbjct: 138 RQKRREMAREHSRRERDRLEQLERKRERERK--------MREQQKEQREQKERERRAEER 189
Query: 104 --EGAAIAEAVALHVLLDEDSDDSYKVECKTW 133
E A E A H + ED D KV+ W
Sbjct: 190 RKEREARREVSAHHRTMREDYSD--KVKASHW 219
>CDL1_HUMAN (P21127) PITSLRE serine/threonine-protein kinase CDC2L1
(EC 2.7.1.37) (Galactosyltransferase associated protein
kinase p58/GTA) (Cell division cycle 2-like 1) (CLK-1)
(CDK11) (p58 CLK-1)
Length = 795
Score = 39.3 bits (90), Expect = 0.006
Identities = 28/92 (30%), Positives = 48/92 (51%), Gaps = 13/92 (14%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDE- 103
+Q R+ ++ + E DRL+Q E+K+ R K + E +K+++++KE ++R +E
Sbjct: 150 RQKRREMAREHSRRERDRLEQLERKRERERK--------MREQQKEQREQKERERRAEER 201
Query: 104 --EGAAIAEAVALHVLLDEDSDDSYKVECKTW 133
E A E A H + ED D KV+ W
Sbjct: 202 RKEREARREVSAHHRTMREDYSD--KVKASHW 231
>TRHY_SHEEP (P22793) Trichohyalin
Length = 1549
Score = 38.9 bits (89), Expect = 0.008
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
Q R+T++ Q ++ L+ +Q +K+KR LE+ L EL +K+Q+++E+Q R ++E
Sbjct: 221 QLQKRETQELQ-RERLEEEQQLQKQKRGLEERLLEQERREQELRRKEQERREQQLRQEQE 279
Query: 105 GAAIAE 110
A E
Sbjct: 280 EATQEE 285
Score = 30.8 bits (68), Expect = 2.1
Identities = 17/60 (28%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
Q+ R+ +K E +++++ E++KRR E+ + EL++++++ +EE+Q L EE
Sbjct: 614 QERERQYLEKVELQEEEQVQRQEREKRRQERE---RQYLEKELQRQEERLQEEEQLLREE 670
Score = 30.0 bits (66), Expect = 3.5
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALA-TSAAIISELEKKKQKKKEEQQRLDE 103
Q+ R+ +K E ++L++ E++KRR E+ + E++ Q++KE+ QR D
Sbjct: 676 QERERQYLEKVELQEEEQLQREEREKRRQERERQYLEKEELQRQEERLQREKEQLQREDR 735
Query: 104 E 104
E
Sbjct: 736 E 736
Score = 29.3 bits (64), Expect = 6.0
Identities = 17/67 (25%), Positives = 37/67 (54%), Gaps = 7/67 (10%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRR-------LEKALATSAAIISELEKKKQKKKEE 97
Q+ ++ +K E ++L++ E++KRR LEK + E++K++++ E
Sbjct: 586 QEREKQYLEKVELQEEEQLQRQEREKRRQERERQYLEKVELQEEEQVQRQEREKRRQERE 645
Query: 98 QQRLDEE 104
+Q L++E
Sbjct: 646 RQYLEKE 652
Score = 28.9 bits (63), Expect = 7.8
Identities = 14/60 (23%), Positives = 35/60 (58%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
+Q R +++Q+ E ++ E++++ LEK + E++K++++ E+Q L++E
Sbjct: 655 RQEERLQEEEQLLREEREKRRQERERQYLEKVELQEEEQLQREEREKRRQERERQYLEKE 714
Score = 28.9 bits (63), Expect = 7.8
Identities = 11/59 (18%), Positives = 37/59 (62%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDE 103
++ ++ +++ ++E ++ ++ E++K+ LEK + E++K++++ E+Q L++
Sbjct: 425 EERLQREEEQLQREEREKRRRQEREKQYLEKVELWEEEQLQREEREKRRQEREKQYLEK 483
>RADI_PIG (P26044) Radixin (Moesin B)
Length = 583
Score = 38.9 bits (89), Expect = 0.008
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 50 KTKKKQVKDEL-DRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAI 108
K + ++ K+EL +RL+Q E++ + +K L EL++++++ KEE +RL++E A
Sbjct: 337 KERIEREKEELMERLRQIEEQTMKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAA 396
Query: 109 AEA 111
EA
Sbjct: 397 EEA 399
>HMMR_HUMAN (O75330) Hyaluronan mediated motility receptor
(Intracellular hyaluronic acid binding protein)
(Receptor for hyaluronan-mediated motility) (CD168
antigen)
Length = 724
Score = 37.7 bits (86), Expect = 0.017
Identities = 23/62 (37%), Positives = 36/62 (57%), Gaps = 1/62 (1%)
Query: 54 KQVKDELDRLKQAEKKKRRLEKALATSA-AIISELEKKKQKKKEEQQRLDEEGAAIAEAV 112
KQ DELD+L+Q E++ RL K L A + EL+ ++K K ++ L++ AA +A
Sbjct: 379 KQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQAT 438
Query: 113 AL 114
L
Sbjct: 439 LL 440
>Y5G8_ENCCU (Q8STA9) Hypothetical protein ECU05_1680/ECU11_0050
Length = 612
Score = 37.4 bits (85), Expect = 0.022
Identities = 20/69 (28%), Positives = 42/69 (59%), Gaps = 4/69 (5%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
++ RK +KK+ K+E K+ EKKK++ EK E +++K+++K+E+++ ++
Sbjct: 325 EEEKRKEEKKKKKEE----KKEEKKKKKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKS 380
Query: 105 GAAIAEAVA 113
G ++ E A
Sbjct: 381 GKSLREGEA 389
Score = 35.8 bits (81), Expect = 0.064
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 33 FLSGIA*FVK*GQQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQ 92
+++ +A VK Q+ + K+++ K E ++ K+ EK+K +K E +KKK+
Sbjct: 293 YINKVANVVKERQRREMEKKEEEKKKEEEKKKEEEKRKEEKKKKKEEKK---EEKKKKKE 349
Query: 93 KKKEEQQRLDEE 104
+KKEE++ +E
Sbjct: 350 EKKEEKKEEKKE 361
Score = 34.7 bits (78), Expect = 0.14
Identities = 20/67 (29%), Positives = 39/67 (57%), Gaps = 2/67 (2%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
++ +K KK++ K+E + K+ +K++++ EK + EKK++KK+E+ + E
Sbjct: 329 RKEEKKKKKEEKKEEKKKKKEEKKEEKKEEKKEEKKEE--KKEEKKEEKKEEKSGKSLRE 386
Query: 105 GAAIAEA 111
G A EA
Sbjct: 387 GEASEEA 393
Score = 30.0 bits (66), Expect = 3.5
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKK--RRLEKALATSAAIISELEKKKQKKKEEQQRLD 102
++ +K ++++ K+E R ++ +KKK ++ EK + E+KK++KKEE++
Sbjct: 312 KEEEKKKEEEKKKEEEKRKEEKKKKKEEKKEEKKKKKEEKKEEKKEEKKEEKKEEKKEEK 371
Query: 103 EE 104
+E
Sbjct: 372 KE 373
Score = 29.3 bits (64), Expect = 6.0
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 52 KKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
KK++ K + ++ K+ E+KK +K E EKK++KK+E+++ EE
Sbjct: 323 KKEEEKRKEEKKKKKEEKKEEKKKKKEEKKEEKKE-EKKEEKKEEKKEEKKEE 374
>MNN4_YEAST (P36044) MNN4 protein
Length = 1178
Score = 37.4 bits (85), Expect = 0.022
Identities = 17/60 (28%), Positives = 37/60 (61%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
++ R+ KKK+ ++E + ++ EKKK+ E+ + E++++KKKEE+++ +E
Sbjct: 1035 EERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQE 1094
Score = 35.4 bits (80), Expect = 0.084
Identities = 17/61 (27%), Positives = 36/61 (58%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
++ + KKK+ +++ + ++ +KKK EK + E++K+KK+EE+++ EE
Sbjct: 1052 KKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEE 1111
Query: 105 G 105
G
Sbjct: 1112 G 1112
Score = 32.7 bits (73), Expect = 0.54
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 11/60 (18%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
++ ++ ++K+ K+E ++ KQ E++K++ E E EKKKQ++ E+ + DEE
Sbjct: 1073 EKKKKEEEEKKKKEEEEKKKQEEEEKKKKE-----------EEEKKKQEEGEKMKNEDEE 1121
Score = 32.0 bits (71), Expect = 0.93
Identities = 15/53 (28%), Positives = 33/53 (61%)
Query: 52 KKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
KKK+ ++E + ++ EKKK+ E+ + E++++KK+EE+++ +E
Sbjct: 1050 KKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKE 1102
Score = 31.6 bits (70), Expect = 1.2
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 52 KKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
KKK+ ++E + ++ EKKK+ E+ + E++++KK+EE +++ E
Sbjct: 1066 KKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNE 1118
Score = 29.6 bits (65), Expect = 4.6
Identities = 15/41 (36%), Positives = 26/41 (62%)
Query: 64 KQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
K E++KRR +K E E+KK+K++EE+++ +EE
Sbjct: 1032 KLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEE 1072
Score = 29.3 bits (64), Expect = 6.0
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 53 KKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEG 105
KK +E + ++ EKKK+ + + E++K+K +EE+++ EEG
Sbjct: 1123 KKNEDEEKKKNEEEEKKKQEEKNKKNEDEEKKKQEEEEKKKNEEEEKKKQEEG 1175
>C190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 190)
(Microtubule binding protein 190) (d-CLIP-190)
Length = 1690
Score = 37.4 bits (85), Expect = 0.022
Identities = 23/94 (24%), Positives = 53/94 (55%), Gaps = 3/94 (3%)
Query: 50 KTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELE---KKKQKKKEEQQRLDEEGA 106
+++KK + D+L+QA++K+R L++ + A +S+L+ ++ QK +++Q L E+G
Sbjct: 1409 ESQKKSHNEIQDKLEQAQQKERTLQEETSKLAEQLSQLKQANEELQKSLQQKQLLLEKGN 1468
Query: 107 AIAEAVALHVLLDEDSDDSYKVECKTWDDYNNNL 140
+A + + ++ DD+ V+ + N +
Sbjct: 1469 EFDTQLAEYQKVIDEMDDAASVKSALLEQLQNRV 1502
Score = 30.8 bits (68), Expect = 2.1
Identities = 21/70 (30%), Positives = 44/70 (62%), Gaps = 10/70 (14%)
Query: 52 KKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQ------KKKEE-QQRLDE- 103
++K+ ++ ++LKQA++ +++L++ TS ++E+++ Q K+KEE Q L+E
Sbjct: 1187 RQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLTEIQQSLQELQDSVKQKEELVQNLEEK 1246
Query: 104 --EGAAIAEA 111
E ++I EA
Sbjct: 1247 VRESSSIIEA 1256
>CAC1_YEAST (Q12495) Chromatin assembly factor 1 p90 subunit (CAF-1
90 kDa subunit) (RAP1 localization factor 2)
Length = 606
Score = 37.0 bits (84), Expect = 0.029
Identities = 22/62 (35%), Positives = 38/62 (60%), Gaps = 2/62 (3%)
Query: 52 KKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQK--KKEEQQRLDEEGAAIA 109
KKK++K E +R ++AE KK++ E+ A + +K+++ KKEE+ RL EE A
Sbjct: 167 KKKELKVEEERQRRAELKKQKEEEKRRKEEARLEAKRRKEEERLKKEEEIRLKEEAKERA 226
Query: 110 EA 111
++
Sbjct: 227 QS 228
Score = 28.9 bits (63), Expect = 7.8
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
++ +K ++ + K + L+Q EKKK+ L+ E KKQK EE++R EE
Sbjct: 143 EKELKKQQRAEEKHRKELLRQEEKKKKELKVEEERQR----RAELKKQK--EEEKRRKEE 196
Query: 105 GAAIAEAVALHVLLDEDSDDSYKVECK 131
A+ L ++ + K E K
Sbjct: 197 ARLEAKRRKEEERLKKEEEIRLKEEAK 223
>IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B
(eIF-5B) (Translation initiation factor IF-2)
Length = 1220
Score = 36.6 bits (83), Expect = 0.038
Identities = 20/65 (30%), Positives = 42/65 (63%), Gaps = 7/65 (10%)
Query: 49 RKTKKKQVKDELDRLKQAEK--KKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGA 106
++ +++Q ++E +R+K+ E+ KR+ E+ L + E+KKQK+KE ++RL +EG
Sbjct: 352 KEEEERQKREEEERIKRLEELEAKRKEEERLEQE-----KRERKKQKEKERKERLKKEGK 406
Query: 107 AIAEA 111
+ ++
Sbjct: 407 LLTKS 411
Score = 32.0 bits (71), Expect = 0.93
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 52 KKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELE--KKKQKKKEEQQRLDEE 104
K K V + K+ E+KKR EKA ELE KK Q K++E QR EE
Sbjct: 224 KIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEE 278
Score = 30.0 bits (66), Expect = 3.5
Identities = 16/54 (29%), Positives = 31/54 (56%)
Query: 50 KTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDE 103
K KKK K+E ++ K+ K ++ A + E E++K++++E +RL+E
Sbjct: 318 KKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEE 371
Score = 29.6 bits (65), Expect = 4.6
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 54 KQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
K+ KD+ + K+ EK+++ EK S A + +++ K KEE++R E
Sbjct: 313 KKKKDK--KKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKRE 361
Score = 29.3 bits (64), Expect = 6.0
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Query: 50 KTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
K K +++ L +LK+ E++++R E+ I LE+ + K+KEE +RL++E
Sbjct: 338 KATVKAMQEALAKLKEEEERQKREEEER------IKRLEELEAKRKEE-ERLEQE 385
>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor
Length = 678
Score = 36.6 bits (83), Expect = 0.038
Identities = 26/98 (26%), Positives = 55/98 (55%), Gaps = 11/98 (11%)
Query: 49 RKTKKKQVKD----ELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKE--EQQRLD 102
RK K+K++K+ E + KQ EK+K++ EK E +++KQK+KE +Q++++
Sbjct: 265 RKQKEKEMKEQEKIEKKKKKQEEKEKKKQEKERKK-----QEKKERKQKEKEMKKQKKIE 319
Query: 103 EEGAAIAEAVALHVLLDEDSDDSYKVECKTWDDYNNNL 140
+E E D++++++ + +T ++ NN +
Sbjct: 320 KERKKKEEKEKKKKKHDKENEETMQQPDQTSEETNNEI 357
Score = 36.6 bits (83), Expect = 0.038
Identities = 22/65 (33%), Positives = 39/65 (59%), Gaps = 6/65 (9%)
Query: 45 QQHARKTKKKQV-----KDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQ 99
Q+ K KKKQ K E +R KQ +K++++ EK + I E KKK++K+++++
Sbjct: 275 QEKIEKKKKKQEEKEKKKQEKERKKQEKKERKQKEKEMKKQKKIEKE-RKKKEEKEKKKK 333
Query: 100 RLDEE 104
+ D+E
Sbjct: 334 KHDKE 338
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 15/59 (25%)
Query: 50 KTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQ----KKKEEQQRLDEE 104
K ++KQ + E+ ++ EKKK++ E E EKKKQ KK+E+++R +E
Sbjct: 262 KKERKQKEKEMKEQEKIEKKKKKQE-----------EKEKKKQEKERKKQEKKERKQKE 309
Score = 30.0 bits (66), Expect = 3.5
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 49 RKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAI 108
+K KK+ K + D+ ++ EKK ++ +K +K+K+ KKE++ + D++
Sbjct: 119 KKKDKKEKKHKKDKKEKKEKKDKKEKKD-----------KKEKKHKKEKKHKKDKKKKEN 167
Query: 109 AEAVALH 115
+E ++L+
Sbjct: 168 SEVMSLY 174
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)
Length = 1362
Score = 35.8 bits (81), Expect = 0.064
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISEL----EKKKQKKKEEQQR 100
++ A K + + + E +RL+Q + R E AL + E E+++Q+++E+QQ+
Sbjct: 1237 REKALKAQAEHAEKEKERLRQERMRSREDEDALEQARRAHEEARRRQEQQQQQRQEQQQQ 1296
Query: 101 LDEEGAAIAEA 111
++ AA+A A
Sbjct: 1297 QQQQAAAVAAA 1307
>YNJ1_YEAST (P53935) Hypothetical 141.5 kDa protein in YPT53-RHO2
intergenic region
Length = 1240
Score = 35.4 bits (80), Expect = 0.084
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 9/56 (16%)
Query: 52 KKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEK-KKQKKKEEQQRLDEEGA 106
K+++ K+EL R ++ EKK+ R +K L E EK +K+K++EE+QRL E A
Sbjct: 723 KQRKQKEELKRKREEEKKRIREQKRL--------EQEKLQKEKEEEERQRLIAEDA 770
Score = 33.9 bits (76), Expect = 0.24
Identities = 16/55 (29%), Positives = 36/55 (65%), Gaps = 9/55 (16%)
Query: 50 KTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
K KK++ +++ + ++ EK+K+RL++ E++K+K++EE++RL +E
Sbjct: 635 KRKKREKEEKKQKKREKEKEKKRLQQLAK---------EEEKRKREEEKERLKKE 680
Score = 33.1 bits (74), Expect = 0.42
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 104
++ R+ + ++ K E + K+ E++KRRLE+ E+++K++K+KEE +R EE
Sbjct: 683 EREMRRREAQRKKVEEAKRKKDEERKRRLEEQQRRE-----EMQEKQRKQKEELKRKREE 737
Score = 32.7 bits (73), Expect = 0.54
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 45 QQHARKTKKKQVKDELDRL----KQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQR 100
++ +K KK++ + E RL K+ EK+KR EK + ELE+++ +++E Q++
Sbjct: 640 EKEEKKQKKREKEKEKKRLQQLAKEEEKRKREEEKE-----RLKKELEEREMRRREAQRK 694
Query: 101 LDEE 104
EE
Sbjct: 695 KVEE 698
Score = 32.0 bits (71), Expect = 0.93
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 9/62 (14%)
Query: 45 QQHARKTKKKQVKDELDRLKQA--EKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLD 102
QQ A++ +K++ ++E +RLK+ E++ RR E A ++E+ K+KK EE++R
Sbjct: 659 QQLAKEEEKRKREEEKERLKKELEEREMRRRE-------AQRKKVEEAKRKKDEERKRRL 711
Query: 103 EE 104
EE
Sbjct: 712 EE 713
Score = 30.4 bits (67), Expect = 2.7
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQ 98
Q+ K K+++ K + K+ E++K + EK +I+E +KQK EEQ
Sbjct: 727 QKEELKRKREEEKKRIREQKRLEQEKLQKEKEEEERQRLIAEDALRKQKLNEEQ 780
Score = 28.9 bits (63), Expect = 7.8
Identities = 20/68 (29%), Positives = 39/68 (56%), Gaps = 9/68 (13%)
Query: 45 QQHARKTKKKQVKDELDRLKQAEKKKR-----RLEKALATSAAIISELEKKKQKKKE--- 96
+ R+ ++K+V +E R K E+K+R R E+ EL++K++++K+
Sbjct: 685 EMRRREAQRKKV-EEAKRKKDEERKRRLEEQQRREEMQEKQRKQKEELKRKREEEKKRIR 743
Query: 97 EQQRLDEE 104
EQ+RL++E
Sbjct: 744 EQKRLEQE 751
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.328 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,564,727
Number of Sequences: 164201
Number of extensions: 843229
Number of successful extensions: 12161
Number of sequences better than 10.0: 543
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 343
Number of HSP's that attempted gapping in prelim test: 9318
Number of HSP's gapped (non-prelim): 2468
length of query: 194
length of database: 59,974,054
effective HSP length: 104
effective length of query: 90
effective length of database: 42,897,150
effective search space: 3860743500
effective search space used: 3860743500
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 63 (28.9 bits)
Medicago: description of AC121237.5