BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC119408.8 + phase: 0
(908 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YKF9_YEAST (P35728) Hypothetical 49.6 kDa protein in FBA1-TOA2 i... 137 1e-31
SFRC_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (Se... 59 4e-08
SFRC_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12 (Seri... 59 6e-08
MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC ... 58 1e-07
NP14_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130... 57 3e-07
SFRC_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12 (Se... 55 8e-07
ELA1_DROME (Q9VCP0) Probable transcription elongation factor B p... 55 1e-06
AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3) (G... 55 1e-06
SFR4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre... 54 2e-06
PPIG_HUMAN (Q13427) Peptidyl-prolyl cis-trans isomerase G (EC 5.... 54 2e-06
SFRF_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CT... 54 2e-06
SFR4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4 54 2e-06
YOW5_CAEEL (P30651) Hypothetical protein ZK643.5 in chromosome III 53 3e-06
SR40_YEAST (P32583) Suppressor protein SRP40 53 3e-06
PPIG_RAT (O55035) Peptidyl-prolyl cis-trans isomerase G (EC 5.2.... 53 3e-06
KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precu... 53 3e-06
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 53 3e-06
TOP1_DROME (P30189) DNA topoisomerase I (EC 5.99.1.2) 52 5e-06
RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U... 52 5e-06
KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precu... 52 7e-06
>YKF9_YEAST (P35728) Hypothetical 49.6 kDa protein in FBA1-TOA2
intergenic region
Length = 441
Score = 137 bits (345), Expect = 1e-31
Identities = 107/440 (24%), Positives = 184/440 (41%), Gaps = 69/440 (15%)
Query: 3 VYYKFKSARDYDSISMDGPFISVGTLKEKIFESKHLGRGTDFDLVVTNAQTNEEYLDEEM 62
++Y+FKS R+ I DG ++V LK +I + LG GTDF L + N T EEY D+
Sbjct: 5 IFYRFKSQRNTSRILFDGTGLTVFDLKREIIQENKLGDGTDFQLKIYNPDTEEEYDDDAF 64
Query: 63 LIPKNTSVLIRRVPGRPRLPIVTEQEYYLKPLISQKVENKVVDTEPANSSLPADDMSAMK 122
+IP++TSV+++R P + +++ V N A +
Sbjct: 65 VIPRSTSVIVKRSPAIKSFSV------------HSRLKGNVGAAALGN---------ATR 103
Query: 123 YVEDSDWDEFGNDLYSIPDQLPVQSINMIQEAPPTSTVDEESKIKALIDTPALDWQHQGS 182
YV P L + A + T +EE +I ++ T W+
Sbjct: 104 YVTGR------------PRVLQKRQHTATTTANVSGTTEEE-RIASMFATQENQWEQTQE 150
Query: 183 DFGAGRG-FGRGMGGRMGGGRGFGLERKTPPQGYVCHRCKVPGHFIQHCPTNGDPNYDVK 241
+ A F + + G PP GY+C+RC H+I++CPTN DPN++ K
Sbjct: 151 EMSAATPVFFKSQTNKNSAQENEG----PPPPGYMCYRCGGRDHWIKNCPTNSDPNFEGK 206
Query: 242 RVKQPTGIPRSMLM---VNPQGSYALPNGSVAVLKPNEAAFEKEMEGMPS--------TT 290
R+++ TGIP+ L ++P+ ++ +E F ++E S
Sbjct: 207 RIRRTTGIPKKFLKSIEIDPETMTPEEMAQRKIMITDEGKFVVQVEDKQSWEDYQRKREN 266
Query: 291 RSVG------------DLPPELHCPLCSNVMKDAVLTSKCCFKSFCDKCIRDYIISKSMC 338
R + DLP +L CPL +++ V TSKCC F + + + ++
Sbjct: 267 RQIDGDETIWRKGHFKDLPDDLKCPLTGGLLRQPVKTSKCCNIDFSKEALENALVESDFV 326
Query: 339 V--CGAMNVLADDLLPNKTLRDTINRILES-----GNSSTENAGSTYQVQDMESARCPQP 391
C ++L D L+P++ + L+ G+S N T +++ M+
Sbjct: 327 CPNCETRDILLDSLVPDQDKEKEVETFLKKQEELHGSSKDGNQPETKKMKLMDPTGTAGL 386
Query: 392 KIPSPTSSAASKGGLKISPV 411
+ ++ + GG + PV
Sbjct: 387 NNNTSLPTSVNNGGTPVPPV 406
>SFRC_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich splicing regulatory protein 86)
(SRrp86)
Length = 494
Score = 59.3 bits (142), Expect = 4e-08
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 6/179 (3%)
Query: 607 SREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDY 666
++++ ++ D ++R+ E+ E+D K+R+ R S D K K PP S +
Sbjct: 299 NKDKDREKEKDHEKERDKEKEKEQDKDKEREKDR--SKETDEKRKKEKKSRTPPRSYNAS 356
Query: 667 HQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQ 726
++R S S PR +K S R R R+ R ++RD+ D
Sbjct: 357 RRSRSTSRERRRRRSRSSSRSPRTSKTVKRKSSRSPSPRGRNKKEKKREKERDHISD--- 413
Query: 727 HRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAE 785
RR R+ ++ K S D K KS+ P + + K S+ + K +P T E
Sbjct: 414 -RRERERSTSTKKSSGDRDGKEKVEKSTTPVKEKEHSKESDATVSKAADEKGSPRTEDE 471
Score = 53.1 bits (126), Expect = 3e-06
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 29/253 (11%)
Query: 615 KADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYHQNRHRSE 674
K+ +RRKR + R ++ R ++ +SK+ S + + ++R RS
Sbjct: 208 KSHSRRKRSQSKHRSRSHNRSRSRQKDRR--------RSKSPHKKRSKSRERRKSRSRSR 259
Query: 675 RPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQHRRHHHRT 734
RE R K K ERERE +DR+ D +R +++D DR + + H
Sbjct: 260 SRDKRKDTREKVKER-VKEKEREKERERE-KDREKD-KERGKNKD--KDREKEKDHEKER 314
Query: 735 EASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAADR 794
+ +K D + +S E D K K K S +S + S+ + +TS E R
Sbjct: 315 DKEKEKEQDKDKEREKDRSKETDEKRKKEKKSRTPPRSYNASRRSRSTSRE--------R 366
Query: 795 KQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVSAKAPSTTHLSNGGRKS 854
+++ S S S + KRK SS + + + H+S+ +
Sbjct: 367 RRRRSRSS-----SRSPRTSKTVKRK---SSRSPSPRGRNKKEKKREKERDHISDRRERE 418
Query: 855 KAVMDDYESSDDD 867
++ S D D
Sbjct: 419 RSTSTKKSSGDRD 431
Score = 43.9 bits (102), Expect = 0.002
Identities = 60/315 (19%), Positives = 112/315 (35%), Gaps = 27/315 (8%)
Query: 601 VPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPP 660
V PP M+ + A++ + KR E + + + + G+ G S +++K
Sbjct: 148 VKPPEMTPQA-AAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKS--- 203
Query: 661 SSASDYHQNRHRSERPSPDSSHREVEPPRPTKR--KSDHSER-----EREDRDRDYDYHD 713
S+S H R RS+ SH + +R KS H +R R+ R R
Sbjct: 204 RSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDK 263
Query: 714 RHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSL 773
R R+ +R + + E + D K + + K K + K
Sbjct: 264 RKDTREKVKERVKEKEREKEREREKDREKD---KERGKNKDKDREKEKDHEKERDKEKEK 320
Query: 774 SLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAA 833
K + +K+K S S+ + + + +++R+ S ++ S
Sbjct: 321 EQDKDKEREKDRSKETDEKRKKEKKSRTPPRSYNASRRSRSTSRERRRRRSRSSSRSPRT 380
Query: 834 TASVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDEDDERHFKRRPS--------RYEPSP 885
+ +V K+ + +K K + + D + ER + S + E S
Sbjct: 381 SKTVKRKSSRSPSPRGRNKKEKKREKERDHISDRRERERSTSTKKSSGDRDGKEKVEKST 440
Query: 886 PPPVDDWVEEGRHSR 900
P V+E HS+
Sbjct: 441 TP-----VKEKEHSK 450
>SFRC_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich splicing regulatory protein 86)
(SRrp86) (SR-related protein of 86 kDa)
Length = 494
Score = 58.9 bits (141), Expect = 6e-08
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 23/213 (10%)
Query: 607 SREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDY 666
++++ ++ D ++R+ E+ E+D K+R+ R S D K K PP S +
Sbjct: 299 NKDKDREKEKDHEKERDKEKEKEQDKDKEREKDR--SKEADEKRKKEKKSRTPPRSYNSS 356
Query: 667 HQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQ 726
++R S S PR +K S R R R+ R ++RD+ DR +
Sbjct: 357 RRSRSASRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRGRNKKEKKREKERDHISDRRE 416
Query: 727 HRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAP---TTS 783
R + ST + SS+ D K K K++ PV K SK A +T
Sbjct: 417 RER----------------STSTKKSSSDRDGKEKVEKTNTPV-KEKEHSKEADSTVSTD 459
Query: 784 AEAAAAAAADRKQKASVFSRISFPSEEEAAAAA 816
A+ A + + KA P EE + A
Sbjct: 460 ADEKDTARTEEESKAQHNGNCQ-PHEERLCSTA 491
Score = 50.8 bits (120), Expect = 2e-05
Identities = 57/273 (20%), Positives = 109/273 (39%), Gaps = 24/273 (8%)
Query: 615 KADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYHQNRHRSE 674
K+ +RRKR + R ++ R ++ + +SK+ S + + ++R RS
Sbjct: 208 KSHSRRKRSQSKHRSRSHNRSRSRQKDRA--------RSKSPHKKRSKSRERRKSRSRSR 259
Query: 675 RPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQHRRHHHRT 734
RE R +R+ + + ++R++D +R +++D DR + + H
Sbjct: 260 SRDKRKDTREKVKERVKEREREKEKEREKEREKD---KERGKNKD--KDREKEKDHEKER 314
Query: 735 EASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAE-----AAAA 789
+ +K D + +S E D K K K S +S + S+ + + S E + ++
Sbjct: 315 DKEKEKEQDKDKEREKDRSKEADEKRKKEKKSRTPPRSYNSSRRSRSASRERRRRRSRSS 374
Query: 790 AAADRKQKASVFSRISFPSEEEAAAAAKKRK-----LSASSTTEASTAATASVSAK-APS 843
+ + R K PS KKR+ +S E ST+ S S +
Sbjct: 375 SRSPRTSKTIKRKSSRSPSPRGRNKKEKKREKERDHISDRRERERSTSTKKSSSDRDGKE 434
Query: 844 TTHLSNGGRKSKAVMDDYESSDDDEDDERHFKR 876
+N K K + +S+ + DE+ R
Sbjct: 435 KVEKTNTPVKEKEHSKEADSTVSTDADEKDTAR 467
Score = 49.7 bits (117), Expect = 4e-05
Identities = 63/311 (20%), Positives = 117/311 (37%), Gaps = 19/311 (6%)
Query: 601 VPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPP 660
V PP M+ + A++ + KR E + + + + G+ G S +++K
Sbjct: 148 VKPPEMTPQA-AAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKS--- 203
Query: 661 SSASDYHQNRHRSERPSPDSSH-----REVEPPR---PTKRKSDHSEREREDRDRDYDYH 712
S+S H R RS+ SH R+ + R P K++S ER R+ R R
Sbjct: 204 RSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRARSKSPHKKRSKSRER-RKSRSRSRSRD 262
Query: 713 DRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKS 772
R R+ +R + R E ++ D K + + K K + K
Sbjct: 263 KRKDTREKVKERVKEREREKEKEREKEREKD---KERGKNKDKDREKEKDHEKERDKEKE 319
Query: 773 LSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTA 832
K + A +K+K S S+ S + +A+++R+ S ++ S
Sbjct: 320 KEQDKDKEREKDRSKEADEKRKKEKKSRTPPRSYNSSRRSRSASRERRRRRSRSSSRSPR 379
Query: 833 ATASVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDEDDERHFKRRPSRYEPSPPPPVDDW 892
+ ++ K+ + +K K + + D + ER + S + V+
Sbjct: 380 TSKTIKRKSSRSPSPRGRNKKEKKREKERDHISDRRERERSTSTKKSSSDRDGKEKVEKT 439
Query: 893 ---VEEGRHSR 900
V+E HS+
Sbjct: 440 NTPVKEKEHSK 450
Score = 48.1 bits (113), Expect = 1e-04
Identities = 49/246 (19%), Positives = 100/246 (39%), Gaps = 24/246 (9%)
Query: 607 SREEFEARKADARRK-RENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASD 665
SR ++ D R K +E + ER+ K+R+ RE + K K D
Sbjct: 256 SRSRSRDKRKDTREKVKERVKEREREKEKEREKEREKDKE------RGKNKDKDREKEKD 309
Query: 666 YHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRH 725
+ + R + + D +E E R +K + ++E++ R Y+ + R +R
Sbjct: 310 HEKERDKEKEKEQDKD-KEREKDR-SKEADEKRKKEKKSRTPPRSYNSSRRSRSASRER- 366
Query: 726 QHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAE 785
RR R+ + S +++ + + +SR S P ++K K E +S + +++
Sbjct: 367 --RRRRSRSSSRSPRTSKTIKRKSSR-SPSPRGRNKKEKKREKERDHISDRRERERSTST 423
Query: 786 AAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVSAKAPSTT 845
+++ D K+K E+ K+++ S + + ST A +A+ +
Sbjct: 424 KKSSSDRDGKEKV-----------EKTNTPVKEKEHSKEADSTVSTDADEKDTARTEEES 472
Query: 846 HLSNGG 851
+ G
Sbjct: 473 KAQHNG 478
>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)
[Contains: Micronuclear linker histone-alpha;
Micronuclear linker histone-beta; Micronuclear linker
histone-delta; Micronuclear linker histone-gamma]
Length = 633
Score = 57.8 bits (138), Expect = 1e-07
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 26/267 (9%)
Query: 614 RKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSK------TKPIPPSSASDYH 667
+K+ + + +++ R S R GR+ SS + S KSK +K SS+S +
Sbjct: 274 KKSSSSKNKKSSSSKGRKSSSSR--GRKASSSKNRKSSKSKDRKSSSSKGRKSSSSSKSN 331
Query: 668 QNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQH 727
+ + S R SS + + + +RK+ H++ ++ D +
Sbjct: 332 KRKASSSRGRKSSSSKGRKSSKSQERKNSHADTSKQMEDEGQKRRQSSSSAKRDESSKKS 391
Query: 728 RRH---HHRTEASSKKSTDPVTKSTSR-----------KSSEPDIKSKSRKSSEPVTKSL 773
RR+ RT+ ++ KS +KS S+ KSS SKSR +S+P + +
Sbjct: 392 RRNSMKEARTKKANNKSASKASKSGSKSKGKSASKSKGKSSSKGKNSKSRSASKPKSNAA 451
Query: 774 SLSKTAPTT--SAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEAST 831
S T S+E A++ R + + + + +++K +K S S+T S
Sbjct: 452 QNSNNTHQTADSSENASSTTQTRTRGRQREQKDMVNEKSNSKSSSKGKKNSKSNTRSKSK 511
Query: 832 AATASVSAK--APSTTHLSNGGRKSKA 856
+ +AS S K + S +N GR++++
Sbjct: 512 SKSASKSRKNASKSKKDTTNHGRQTRS 538
Score = 46.2 bits (108), Expect = 4e-04
Identities = 54/265 (20%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 609 EEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYHQ 668
+++ + A +K++ +R+ S R SS G S K +TK +D
Sbjct: 161 KKWNEKYGQAAQKKQTKRKNSTSKS------RRSSSKGKSSVSKGRTKSTSSKRRADSSA 214
Query: 669 NRHRSERPSPD----SSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDR 724
++ RS+ S + SS ++ + R + RK+ +S+ + ++ R
Sbjct: 215 SQGRSQSSSSNRRKASSSKDQKGTRSSSRKASNSKGRKNSTSNK-------RNSSSSSKR 267
Query: 725 HQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSA 784
++ + + +KKS+ + +S SK+RKSS+ + S SK ++S+
Sbjct: 268 SSSSKNKKSSSSKNKKSSSSKGRKSSSSRGRKASSSKNRKSSKSKDRKSSSSKGRKSSSS 327
Query: 785 EAA----AAAAADRKQKASVFSRISFPSEEEAAAA---------AKKRKLSASSTTEAST 831
+ A+++ RK +S + S E + + A +KR+ S+SS +
Sbjct: 328 SKSNKRKASSSRGRKSSSSKGRKSSKSQERKNSHADTSKQMEDEGQKRRQSSSSAKRDES 387
Query: 832 AATASVSAKAPSTTHLSNGGRKSKA 856
+ + ++ + T +N SKA
Sbjct: 388 SKKSRRNSMKEARTKKANNKSASKA 412
Score = 43.5 bits (101), Expect = 0.003
Identities = 69/325 (21%), Positives = 129/325 (39%), Gaps = 59/325 (18%)
Query: 599 MNVPPP----AMSREEFEARKADARRKRENERRVERDFSKDRDFGRE-VSSVGDVSSIKS 653
+N+ PP + + + F K +A K + ++V+ D++K + +E + + D + K
Sbjct: 8 LNIQPPKKPFSNTYQAFVLEKKNALGKNFDNKKVQADYNKLSNNEKERLQKLVDNAEEKY 67
Query: 654 KTKPIPPSSASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHD 713
K + +H N H + + P +P K E+R + Y
Sbjct: 68 KEEL--------FHYNNHIQGKGKQKYVPQVKVPEKPKKPIGSFFRFLEENRQK---YAA 116
Query: 714 RHQD-----------RDYXH----------DRHQHRRHHHRTEA---SSKKSTDPVTKST 749
+H+D D+ + D +Q + E + K K T
Sbjct: 117 KHKDLTNAKILKIMSEDFNNLPQKEVKVYEDAYQKEYAQYLVEFKKWNEKYGQAAQKKQT 176
Query: 750 SRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAA-AAAAADRKQKASVFSRISFPS 808
RK+S SKSR+SS S+S +T T+S A ++A+ R Q +S R + S
Sbjct: 177 KRKNST----SKSRRSSSKGKSSVSKGRTKSTSSKRRADSSASQGRSQSSSSNRRKASSS 232
Query: 809 EEEAAAAAKKRKLS--------------ASSTTEASTAATASVSAKAPSTTHLSNGGRKS 854
+++ + RK S +SS+++ S+++ S+ + + S+ GRKS
Sbjct: 233 KDQKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSKNKKSSSSKGRKS 292
Query: 855 KAVMDDYESSDDDEDDERHFKRRPS 879
+ SS + + R+ S
Sbjct: 293 SSSRGRKASSSKNRKSSKSKDRKSS 317
Score = 40.4 bits (93), Expect = 0.022
Identities = 47/252 (18%), Positives = 95/252 (37%), Gaps = 9/252 (3%)
Query: 606 MSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASD 665
M E + R++ + KR+ + R S ++ ++ + KS +K S
Sbjct: 368 MEDEGQKRRQSSSSAKRDESSKKSRRNSMKEARTKKANNKSASKASKSGSK----SKGKS 423
Query: 666 YHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRH 725
+++ +S +S R P+ + +S + D + Q R R
Sbjct: 424 ASKSKGKSSSKGKNSKSRSASKPK--SNAAQNSNNTHQTADSSENASSTTQTRTRGRQRE 481
Query: 726 QHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSL--SKTAPTTS 783
Q + ++ + S +KS +R S+ SKSRK++ K + +T +
Sbjct: 482 QKDMVNEKSNSKSSSKGKKNSKSNTRSKSKSKSASKSRKNASKSKKDTTNHGRQTRSKSR 541
Query: 784 AEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVSAKAPS 843
+E+ + + A K ++ I P EE + ++ + ++ T + S S K +
Sbjct: 542 SESKSKSEAPNK-PSNKMEVIEQPKEESSDRKRRESRSQSAKKTSDKKSKNRSDSKKMTA 600
Query: 844 TTHLSNGGRKSK 855
N SK
Sbjct: 601 EDPKKNNAEDSK 612
Score = 36.2 bits (82), Expect = 0.41
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 11/181 (6%)
Query: 733 RTEASSKKSTDPV----TKSTS--RKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEA 786
++ SS K V TKSTS R++ + +S+ SS K+ S T S+
Sbjct: 184 KSRRSSSKGKSSVSKGRTKSTSSKRRADSSASQGRSQSSSSNRRKASSSKDQKGTRSSSR 243
Query: 787 AAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVSAKAPSTTH 846
A+ + RK S S S+ +++ K K S+SS + S+++ S+ +
Sbjct: 244 KASNSKGRKNSTSNKRNSSSSSKRSSSS---KNKKSSSSKNKKSSSSKGRKSSSSRGRKA 300
Query: 847 LSNGGRKSKAVMDDYESSDDDEDDERHFKRRPSRYEPSPPPPVDDWVEEGRHSRGTRDRK 906
S+ RKS D SS K + S +GR S +++RK
Sbjct: 301 SSSKNRKSSKSKDRKSSSSKGRKSSSSSKSNKRKASSSRGRKSSS--SKGRKSSKSQERK 358
Query: 907 H 907
+
Sbjct: 359 N 359
>NP14_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130
kDa protein) (140 kDa nucleolar phosphoprotein)
(Nopp140) (Nucleolar and coiled-body phosphoprotein 1)
Length = 699
Score = 56.6 bits (135), Expect = 3e-07
Identities = 67/254 (26%), Positives = 101/254 (39%), Gaps = 30/254 (11%)
Query: 640 REVSSVGDVSSIKSKTKPIPPSSASDYHQNRHRSERPSPDSSHREVE------PPRPTKR 693
R++ + G V+ K+K K SS+ + E P + V PP
Sbjct: 66 RKLQANGPVAK-KAKKKA---SSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAA 121
Query: 694 KSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKS 753
K+ S E RD D D D+ + + Q + +A KK+ + S S
Sbjct: 122 KASESSSSEESRDDD-DEEDQKKQPVQKGVKPQAKA----AKAPPKKAKSSDSDSDSSSE 176
Query: 754 SEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAA 813
EP K++ K + K+ + + P +A A A +S S S SEEE A
Sbjct: 177 DEPP-KNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKA 235
Query: 814 AAAKKRKLSASSTTEASTAATASVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDEDDERH 873
AA K+ T V AKAP + RKS + D SSD++E+ ++
Sbjct: 236 AATPKK-----------TVPKKQVVAKAPVKA-ATTPTRKSSSSEDS--SSDEEEEQKKP 281
Query: 874 FKRRPSRYEPSPPP 887
K +P Y +PPP
Sbjct: 282 MKNKPGPYSYAPPP 295
Score = 53.1 bits (126), Expect = 3e-06
Identities = 60/274 (21%), Positives = 107/274 (38%), Gaps = 23/274 (8%)
Query: 651 IKSKTKPIPPSSASDYHQNRHRSERPSPDSS----HREVEPPR-PTKRKSDHSEREREDR 705
+K+ T P SS+S+ + E+ P + + PP P +KS ++ ++
Sbjct: 254 VKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSYAPPPSAPPPKKSLGTQPPKKAV 313
Query: 706 DRDYDYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKS 765
++ D + + SK +T P + +SS S S +
Sbjct: 314 EKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSED 373
Query: 766 SEPVTKSL-----SLSKTAPTTSAEAAAAAAADRK-----QKASVFSRISFPSEEEAAAA 815
E +K S +K A TT + A AAA ++ QK S SEEE++++
Sbjct: 374 DEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSS 433
Query: 816 AKKRKLSASSTTEASTAATASVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDEDDERH-F 874
+++ +TT+ A A++S A G R S + D S +++E +
Sbjct: 434 EEEKTKKMVATTKPKATAKAALSLPAKQA---PQGSRDSSSDSDSSSSEEEEEKTSKSAV 490
Query: 875 KRRPSRY----EPSPPPPVDDWVEEGRHSRGTRD 904
K++P + PS P E +S + D
Sbjct: 491 KKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDD 524
Score = 48.1 bits (113), Expect = 1e-04
Identities = 64/314 (20%), Positives = 116/314 (36%), Gaps = 56/314 (17%)
Query: 575 GMQGYMMPPIPPPPHRDLAEFSMGMNVPPPAMSREEFEARKADARRKRENERRVERDFSK 634
G Y PP PPP + S+G P A+ +++ D+ E D S
Sbjct: 287 GPYSYAPPPSAPPPKK-----SLGTQPPKKAVEKQQPVESSEDSSD--------ESDSSS 333
Query: 635 DRDFGREVSSVGDVSSIKSKTKPIPPSSASDYHQNRHRSERPSPDSSHREVEPPRPTKRK 694
+ + +V K+ TKP P A++ S+ DSS + P +P
Sbjct: 334 EEEKKPPTKAVVS----KATTKPPPAKKAAE-----SSSDSSDSDSSEDDEAPSKPAGTT 384
Query: 695 SDHSEREREDRDRDYDYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSS 754
+ S + + + A+ K+ K +RK+
Sbjct: 385 KNSSNKPAVTT----------------------KSPAVKPAAAPKQPVGGGQKLLTRKAD 422
Query: 755 EPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAA 814
+ +S S E TK + ++ T P +A+AA + A ++A SR S + +++
Sbjct: 423 SSSSEEESSSSEEEKTKKM-VATTKPKATAKAALSLPA---KQAPQGSRDSSSDSDSSSS 478
Query: 815 AAKKRKLSASSTTEASTAATASVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDEDDERHF 874
++ K S S+ + + P++ +K KA + SSDD ++E
Sbjct: 479 EEEEEKTSKSAVKKKPQKVAGGAAPSKPAS------AKKGKAESSNSSSSDDSSEEEE-- 530
Query: 875 KRRPSRYEPSPPPP 888
++ + P P P
Sbjct: 531 EKLKGKGSPRPQAP 544
>SFRC_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich splicing regulatory protein 86)
(SRrp86) (Splicing regulatory protein 508) (SRrp508)
Length = 508
Score = 55.1 bits (131), Expect = 8e-07
Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 10/219 (4%)
Query: 608 REEFEARKADARRKRENERRVERDFSKDRDFGREV-SSVGDVSSIKSKTKPIPPSSASDY 666
++ ++ +R + ERR R S RD ++ + + +K K + +
Sbjct: 230 KDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKER 289
Query: 667 HQNRHRSERPSPDSSHREVEPPRPTKRKSDHSERERE---DRDRDYDYHDRHQDRDYXHD 723
+ + R + D +E E R ++ D ERERE ++DRD + ++ QD++ +
Sbjct: 290 EKEKERGKNKDRD---KEREKDREKDKEKDR-EREREKEHEKDRDKE-KEKEQDKEKERE 344
Query: 724 RHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTS 783
+ + + + + K T P + + SR+S + + R+ S ++S SKT S
Sbjct: 345 KDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSS-RERRRRRSRSSSRSPRTSKTIKRKS 403
Query: 784 AEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLS 822
+ + + + ++K K R E + RK S
Sbjct: 404 SRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSS 442
Score = 50.1 bits (118), Expect = 3e-05
Identities = 57/298 (19%), Positives = 103/298 (34%), Gaps = 20/298 (6%)
Query: 601 VPPPAMSREEFEARKADARRKRENERRV--------ERDFSKDRDFGREVSSVGDVSSIK 652
V PP M+ + A++ + KR E + E S +R GR S S
Sbjct: 145 VKPPEMTPQA-AAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSS 203
Query: 653 SKTKPIPPSSASDYHQNRHRSERPSPDSSHREVEP--------PRPTKRKSDHSERERED 704
SK+ S S + H R R P R R HS +R+D
Sbjct: 204 SKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKD 263
Query: 705 RDRDYDYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRK 764
+R +++D +R + + E K D + K E D + + K
Sbjct: 264 TREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREK 323
Query: 765 SSEPVTKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRI---SFPSEEEAAAAAKKRKL 821
E + E + D K+K SR S+ + + +++++R+
Sbjct: 324 EHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRR 383
Query: 822 SASSTTEASTAATASVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDEDDERHFKRRPS 879
S ++ S + ++ K+ + + +K K + + + + ER R S
Sbjct: 384 RRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKS 441
Score = 48.5 bits (114), Expect = 8e-05
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 12/176 (6%)
Query: 614 RKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSI------KSKTKPIPPSSASDYH 667
++ D R+RE E +RD K+++ +E D S K K PP S +
Sbjct: 313 KEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASR 372
Query: 668 QNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQH 727
++R S S PR +K S R R R+ R ++RD+ +
Sbjct: 373 RSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISE---- 428
Query: 728 RRHHHRTEASSKKSTDPVTKSTSRKSSEP-DIKSKSRKSSEPVTKSLSLSKTAPTT 782
RR R+ + K S D K K+S K +++ V+K + K AP T
Sbjct: 429 RRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVD-DKDAPRT 483
Score = 38.5 bits (88), Expect = 0.082
Identities = 46/194 (23%), Positives = 75/194 (37%), Gaps = 10/194 (5%)
Query: 608 REEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYH 667
RE+ + R + R +E E+ E+D KDR+ RE D K K + D
Sbjct: 289 REKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKD-- 346
Query: 668 QNRHRSERPSPDSSHREVEPPRP--TKRKSDHSEREREDRDRDYDYHDRHQDRDYXH--D 723
+++ E+ D R PPR R+S S RER R +
Sbjct: 347 RSKEIDEKRKKDKKSRT--PPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSS 404
Query: 724 RHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKS-RKSSEPVTK-SLSLSKTAPT 781
R R ++ + +K D +++ R+ S KS + R E + K S SL +
Sbjct: 405 RSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHN 464
Query: 782 TSAEAAAAAAADRK 795
+++ + D K
Sbjct: 465 KEPDSSVSKEVDDK 478
>ELA1_DROME (Q9VCP0) Probable transcription elongation factor B
polypeptide 3 (RNA polymerase II transcription factor
SIII subunit A) (Elongin A)
Length = 643
Score = 54.7 bits (130), Expect = 1e-06
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 27/235 (11%)
Query: 635 DRDFGREVSSVGDVSSIKSKTKPIPPSSASDYHQNRHRSERPSPDSSHREVEPPRPTKRK 694
+ D G+ SS D + K SS D + ++H+S+ R +K +
Sbjct: 96 EEDSGKTKSSDEDPDQ---ENKGGNSSSGEDLNTSKHKSKHAKSTKHERSSSSRSHSKSR 152
Query: 695 SDHSEREREDRDRDYDYHDRHQDRDYXHDRHQHRRHHHRTEASSK-KSTDPVTKSTSRKS 753
SD ++ + R HD+ +DRD + + + H +++ + KS D S+S KS
Sbjct: 153 SDSDKKHKSSR------HDKSKDRDKDREGQKEAKEHKEKKSNGEHKSKDSSKSSSSHKS 206
Query: 754 SEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISF--PSEEE 811
S KS+S KS TKS + + ++ K +S S+ S P EE
Sbjct: 207 S----KSESHKSEH--TKSKHEKDKTSHSELKEVKDKSSKHKSSSSKSSKRSHSPPRHEE 260
Query: 812 AAAAAKKRKLSASSTTEASTAATASVSA---------KAPSTTHLSNGGRKSKAV 857
+ AK K+ + S +++ +S+ A P ++ S+ KSK V
Sbjct: 261 ESQKAKIPKVKSKSEEDSADGFDSSMGANFDDVLGLLNIPISSKKSSSNSKSKFV 315
Score = 43.1 bits (100), Expect = 0.003
Identities = 52/234 (22%), Positives = 91/234 (38%), Gaps = 20/234 (8%)
Query: 607 SREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGD-VSSIKSKTKPIPPSSASD 665
SR + + + +R + +R +R+ K+ +E S G+ S SK+ SS S+
Sbjct: 151 SRSDSDKKHKSSRHDKSKDRDKDREGQKEAKEHKEKKSNGEHKSKDSSKSSSSHKSSKSE 210
Query: 666 YHQNRHRSERPSPD-SSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDR 724
H++ H + D +SH E++ + K S + R H+ +
Sbjct: 211 SHKSEHTKSKHEKDKTSHSELKEVKDKSSKHKSSSSKSSKRSHSPPRHEEESQKAKIPKV 270
Query: 725 HQHRRHHHRT--EASSKKSTDPVT-----KSTSRKSSEPDIKSKSRKSSEPVTKSLSLSK 777
++S + D V +S+KSS SKS+ ++P S +
Sbjct: 271 KSKSEEDSADGFDSSMGANFDDVLGLLNIPISSKKSSS---NSKSKFVAKPTAAPSSSAL 327
Query: 778 TAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEAST 831
+APTT+ + K+ S SR + E A+ AK L + E T
Sbjct: 328 SAPTTAGSS--------KEALSTSSRPTSKKPELLASTAKLEPLDPNIALELPT 373
>AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3)
(Glucan 1,4-alpha-glucosidase) (1,4-alpha-D-glucan
glucohydrolase)
Length = 1367
Score = 54.7 bits (130), Expect = 1e-06
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 734 TEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAAD 793
+ ++++ S+ PVT ST+ SS P S + SS PVT S + S +AP TS+ +++A
Sbjct: 399 SSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPV 458
Query: 794 RKQKASVFSRISFP-SEEEAAAAAKKRKLSASSTTEASTA---ATASVSAKAPSTTHLSN 849
+S S P + +++ +SSTTE+S+A ++ + S+ AP T S+
Sbjct: 459 PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSS 518
Query: 850 GGRKSKA 856
S A
Sbjct: 519 TTESSSA 525
Score = 50.1 bits (118), Expect = 3e-05
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 734 TEASSKKSTDPVTKSTSRKSSEP---DIKSKSRKSSEPVTKSLSLSKTAPTTSA--EAAA 788
T ++++ S+ PVT ST+ SS P S + SS PVT S + S +AP TS+ E+++
Sbjct: 372 TSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSS 431
Query: 789 AAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTA---ATASVSAKAPSTT 845
A ++S S +E +A +SSTTE+S+A ++ + S+ AP T
Sbjct: 432 APVTSSTTESSSAPVTSSTTESSSAPV----PTPSSSTTESSSAPVTSSTTESSSAPVPT 487
Query: 846 HLSNGGRKSKA 856
S+ S A
Sbjct: 488 PSSSTTESSSA 498
Score = 50.1 bits (118), Expect = 3e-05
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 18/172 (10%)
Query: 734 TEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAP--------TTSAE 785
T ++++ S+ PVT ST+ SS P S + SS PVT S + S +AP T S+
Sbjct: 411 TSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSS 470
Query: 786 AAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSAS--------STTEAST--AATA 835
A ++ A V + S +E +A S+S STTE+S+ A T
Sbjct: 471 APVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTP 530
Query: 836 SVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDEDDERHFKRRPSRYEPSPPP 887
S S S+ +++ +S + SS E + +P P
Sbjct: 531 SSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVP 582
Score = 50.1 bits (118), Expect = 3e-05
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 734 TEASSKKSTDPVTKSTSRKSSEP---DIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAA 790
+ ++++ S+ PVT ST+ SS P S + SS PVT S + S +AP TS+ +++
Sbjct: 333 SSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSS 392
Query: 791 AADRKQKASVFSRISFP---SEEEAAAAAKKRKLSASSTTEASTAATASVSAKAPSTT 845
A +S S P S E+++A + SS+ +++ T S SA S+T
Sbjct: 393 APVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSST 450
Score = 48.5 bits (114), Expect = 8e-05
Identities = 97/508 (19%), Positives = 170/508 (33%), Gaps = 67/508 (13%)
Query: 368 NSSTENAGSTYQVQDMESARCPQPKIPSPTSSAASKGGLKISPVYDGTTNIQDTAVETKV 427
+S+TE++ + ES+ P +P+P+SS ++ +++ T+ T+
Sbjct: 334 SSTTESSSAPVTSSTTESSSAP---VPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTES 390
Query: 428 VSAP-PQTSEHVKIPRAGDVSEATHESKSV---KEPVSQGSAQVVEEEVQQKLVP-TEAG 482
SAP P S + V+ +T ES S SA V + P T +
Sbjct: 391 SSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSST 450
Query: 483 KKKKKKKVRMP---TNDFQWKPPHDLGAENYMMQMGPPPGYNPYWNGMQPCMDGFMAPYA 539
+ V P T + P E+ + P P + + P +
Sbjct: 451 TESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPV-PTPSSSTTESSSAPVTSSTTESSS 509
Query: 540 GPMHMMDYGHGPYDMPFPNGMPHDPFANGMPHDPFGMQGYMMPPIPPPPHRDLAEFSMGM 599
P+ P P+ + + P P+ S
Sbjct: 510 APV------------PTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTE-----SSSA 552
Query: 600 NVPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIP 659
VP P+ S E + + + V S + S+ +S + P P
Sbjct: 553 PVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPAP 612
Query: 660 PSSASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRD 719
S+S + + +SS V P + +S +
Sbjct: 613 TPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSST------------ 660
Query: 720 YXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTA 779
TE+SS P + ST+ SS P S + SS PVT S + S +A
Sbjct: 661 --------------TESSSAPVPTP-SSSTTESSSAPVTSSTTESSSAPVTSSTTESSSA 705
Query: 780 PTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTA---ATAS 836
P + ++ ++ + + PS +++ +SSTTE+S+A ++ +
Sbjct: 706 PVPTPSSSTTESSS--------APVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTT 757
Query: 837 VSAKAPSTTHLSNGGRKSKAVMDDYESS 864
S+ AP T S+ S A + SS
Sbjct: 758 ESSSAPVPTPSSSTTESSSAPVPTPSSS 785
Score = 47.0 bits (110), Expect = 2e-04
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 734 TEASSKKSTDPV---TKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAA 790
T ++++ S+ PV + ST+ SS P S + SS PVT S + S +AP + ++
Sbjct: 345 TSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTE 404
Query: 791 AADRKQKASVFSRISFP---SEEEAAAAAKKRKLSASSTTEASTAATASVSAKAPSTTHL 847
++ +S S P S E+++A + SS+ +++ T S SA P+ +
Sbjct: 405 SSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSS 464
Query: 848 SNGGRKSKAVMDDYESS 864
+ + ESS
Sbjct: 465 TTESSSAPVTSSTTESS 481
Score = 46.6 bits (109), Expect = 3e-04
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 734 TEASSKKSTDPVTKSTSRKSSEP---DIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAA 790
+ ++++ S+ PVT ST+ SS P S + SS PVT S + S +AP + ++
Sbjct: 531 SSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTE 590
Query: 791 AADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTA---ATASVSAKAPSTTHL 847
++ + + PS +++ +SSTTE+S+A ++ + S+ AP T
Sbjct: 591 SSS--------APVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPS 642
Query: 848 SNGGRKSKAVMDDYESS 864
S+ S A + SS
Sbjct: 643 SSTTESSSAPVPTPSSS 659
Score = 41.6 bits (96), Expect = 0.010
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 730 HHHRTEAS----------SKKSTDPV---TKSTSRKSSEP---DIKSKSRKSSEPVTKSL 773
HH T + +KK+T PV + ST+ SS P S + SS PVT S
Sbjct: 289 HHDTTPCTKKKTTTSKTCTKKTTTPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSST 348
Query: 774 SLSKTAPTTSAEAAAAAAADRKQKASVFSRISFP-SEEEAAAAAKKRKLSASSTTEASTA 832
+ S +AP + ++ ++ +S S P + +++ +SSTTE+S+A
Sbjct: 349 TESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSA 408
Query: 833 ATASVSAKAPSTTHLSNGGRKSKA 856
S + ++ S S+ S A
Sbjct: 409 PVTSSTTESSSAPVTSSTTESSSA 432
Score = 39.3 bits (90), Expect = 0.048
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 17/161 (10%)
Query: 734 TEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPV---TKSLSLSKTAPTTSAEAAAAA 790
TE+SS + P + ST+ SS P S + SS PV + S + S + P TS+ +++
Sbjct: 520 TESSSAPAPTP-SSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSS 578
Query: 791 AADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEAST--AATASVSAKAPSTTHLS 848
A + PS +++ +SSTTE+S+ A T S S S+ ++
Sbjct: 579 AP-----------VPTPSSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVT 627
Query: 849 NGGRKSKAVMDDYESSDDDEDDERHFKRRPSRYEPSPPPPV 889
+ +S + SS E S S PV
Sbjct: 628 SSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPV 668
Score = 38.9 bits (89), Expect = 0.063
Identities = 105/533 (19%), Positives = 165/533 (30%), Gaps = 70/533 (13%)
Query: 368 NSSTENAGSTYQVQDMESARCPQPKIPSPTSSAASKGGLKISPVYDGTTNIQDTAVETKV 427
+S+TE++ + ES+ P +P+P+SS +PV TT V +
Sbjct: 373 SSTTESSSAPVTSSTTESSSAP---VPTPSSSTTESSS---APVTSSTTESSSAPVTSST 426
Query: 428 V--SAPPQTSEHVKIPRAGDVSEATHESKSVKEPV------SQGSAQVVEEEVQQKLVPT 479
S+ P TS + A V+ +T ES S P SA V + P
Sbjct: 427 TESSSAPVTSSTTESSSA-PVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPV 485
Query: 480 EAGKKKKKKKVRMPTNDFQWK------PPHDLGAENYMMQMGPPPGYNPYWNGMQPCMDG 533
+ P + P P P + + P
Sbjct: 486 PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSS 545
Query: 534 FMAPYAGPMHMMDYGHGPYDMPFPNGMPHDPFANGMPHDPFGMQGYMMPPIPPPPHRDLA 593
+ P+ P P+ + + + P+P P
Sbjct: 546 TTESSSAPV------------PTPSSSTTESSSTPVTSSTTESSS---APVPTPSSSTTE 590
Query: 594 EFSMGMNVPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKS 653
S VP P+ S E + A E S + S+ +S
Sbjct: 591 --SSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTES 648
Query: 654 KTKPIPPSSASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSER---EREDRDRDYD 710
+ P+P S+S + + P+P SS E T ++ S
Sbjct: 649 SSAPVPTPSSSTTESSS--APVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAP 706
Query: 711 YHDRHQDRDYXHDRHQHRRHHHRTEASS-----------KKSTDPVTKSTSRKSSEP--- 756
TE+SS + S+ PVT ST+ SS P
Sbjct: 707 VPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPT 766
Query: 757 DIKSKSRKSSEPV---TKSLSLSKTAP-------TTSAEAAAAAAADRKQKASVFSRISF 806
S + SS PV + S + S +AP TT + A + + S
Sbjct: 767 PSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPSST 826
Query: 807 PSEEEAAAAAKKRKLSASSTTEASTAATAS---VSAKAPSTTHLSNGGRKSKA 856
P +++ +SSTTE+S+A +S S+ AP T S+ S A
Sbjct: 827 PFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPSSSSNITSSA 879
Score = 35.4 bits (80), Expect = 0.69
Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 6/137 (4%)
Query: 734 TEASSKKSTDPVTKSTSRKSSEPD------IKSKSRKSSEPVTKSLSLSKTAPTTSAEAA 787
T + +K T P T S +++ P K +S+ TK + P++S +
Sbjct: 265 TSCTKEKPTPPTTTSCTKEKPTPPHHDTTPCTKKKTTTSKTCTKKTTTPVPTPSSSTTES 324
Query: 788 AAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVSAKAPSTTHL 847
++A ++ S + + +++ +SSTTE+S+A S + ++ S
Sbjct: 325 SSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVT 384
Query: 848 SNGGRKSKAVMDDYESS 864
S+ S A + SS
Sbjct: 385 SSTTESSSAPVPTPSSS 401
Score = 32.0 bits (71), Expect = 7.7
Identities = 27/129 (20%), Positives = 54/129 (40%), Gaps = 20/129 (15%)
Query: 734 TEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAAD 793
+E+S+ S+ + +T+ +SE S + + P T S + K P T+
Sbjct: 228 SESSTTTSSTSESSTTTSSTSESSTSSSTTAPATPTTTSCTKEKPTPPTTTSCT------ 281
Query: 794 RKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEAST------AATASVSAKAPSTTHL 847
K+K + P + KK+ ++ + T+ +T +++ + S+ AP T
Sbjct: 282 -KEKPT-------PPHHDTTPCTKKKTTTSKTCTKKTTTPVPTPSSSTTESSSAPVPTPS 333
Query: 848 SNGGRKSKA 856
S+ S A
Sbjct: 334 SSTTESSSA 342
>SFR4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4
(Pre-mRNA splicing factor SRP75) (SRP001LB)
Length = 494
Score = 53.9 bits (128), Expect = 2e-06
Identities = 47/206 (22%), Positives = 89/206 (42%), Gaps = 9/206 (4%)
Query: 604 PAMSREEFEARKADARRKRENERR--VERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPS 661
P+ + + ++R R+ E E+R V R S+++ + S +S+++ S
Sbjct: 291 PSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRS--RS 348
Query: 662 SASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYX 721
+ D + R RS S S + R KR S + + + + DR Q R
Sbjct: 349 KSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPS 408
Query: 722 HDRHQHRRHHHRTEASSKK----STDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSK 777
+ R H ++E+S ++ S + T +R S + KSK SE ++S S SK
Sbjct: 409 RSVSKEREHA-KSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASK 467
Query: 778 TAPTTSAEAAAAAAADRKQKASVFSR 803
T + + + +A+ + + ++ SR
Sbjct: 468 TRSRSKSRSRSASRSPSRSRSRSHSR 493
Score = 47.4 bits (111), Expect = 2e-04
Identities = 62/288 (21%), Positives = 96/288 (32%), Gaps = 18/288 (6%)
Query: 608 REEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYH 667
R+ E ADA + R+NE +E D E +V+ K + P S
Sbjct: 125 RQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRS 184
Query: 668 QNRHRS-ERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQ 726
+R RS R S H R KS HS+ R R + R R +
Sbjct: 185 YSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGS---RSRSKSRSRSQSRSR 241
Query: 727 HRRHHHRTEASSKKSTDPVTKSTSRKSSEPDI-----------KSKSRKSSEPVTKSLSL 775
++ R+ + K + + SR S+ K KSR S +KS S
Sbjct: 242 SKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSR 301
Query: 776 SKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATA 835
S++ E + + + + + S + + ++ R S S +
Sbjct: 302 SRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSR 361
Query: 836 SVSAKAPSTTHLSNGGRKSKAVMDDYESSD---DDEDDERHFKRRPSR 880
S + S RK + D S ED +R R PSR
Sbjct: 362 EESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSR 409
Score = 46.6 bits (109), Expect = 3e-04
Identities = 51/272 (18%), Positives = 97/272 (34%), Gaps = 37/272 (13%)
Query: 619 RRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYHQNRHRSERPSP 678
RR R R S+ R + S G S SK++ S + ++R RS+ S
Sbjct: 182 RRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSR 241
Query: 679 DSSHREVEPPRPTKRKSDHSEREREDRDRDYDYH----------------DRHQDRDYXH 722
+ P + R HS + + +D RH+ +
Sbjct: 242 SKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSR 301
Query: 723 DRHQHRR-------------------HHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSR 763
R Q RR R+ + SK + ++S S+ + + +SR
Sbjct: 302 SRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSR 361
Query: 764 KSSEPVTKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSA 823
+ S ++S S S+ + ++ + A + +K+K R S + + +K+R+ +
Sbjct: 362 EESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQ--SRSPSRSVSKEREHAK 419
Query: 824 SSTTEASTAATASVSAKAPSTTHLSNGGRKSK 855
S +++ + + T S KSK
Sbjct: 420 SESSQREGRGESENAGTNQETRSRSRSNSKSK 451
>PPIG_HUMAN (Q13427) Peptidyl-prolyl cis-trans isomerase G (EC
5.2.1.8) (Peptidyl-prolyl isomerase G) (PPIase G)
(Rotamase G) (Cyclophilin G) (Clk associating
RS-cyclophilin) (CARS-cyclophilin) (CARS-Cyp) (SRcyp)
(CASP10)
Length = 754
Score = 53.9 bits (128), Expect = 2e-06
Identities = 64/292 (21%), Positives = 116/292 (38%), Gaps = 22/292 (7%)
Query: 607 SREEFEARKADARRKRENERRVE-----RDFSKDRDFGREVSSVG-DVSSIKSKTKPIPP 660
S+E+ ++++ D++ R E+R+ RD ++ ++ S G D +SK K
Sbjct: 464 SKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQL 523
Query: 661 SSASDYHQNRHRSERPS-PDSSHREVEPPRPTKRKSDHSERERE---DRDRDYDYHDRHQ 716
S S+ H + E+ S RE + TK K ++ R RE RDR R
Sbjct: 524 ESKSNEHDHSKSKEKDRRAQSRSRECDI---TKGKHSYNSRTRERSRSRDRSRRVRSRTH 580
Query: 717 DRDYXHDR--HQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLS 774
DRD + H++R +R S+ SR + SR S ++S +
Sbjct: 581 DRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRN 640
Query: 775 LSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAAT 834
K S ++ RK+ + R+ S + ++ + K + + S
Sbjct: 641 KDKYRNQES------KSSHRKENSESEKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQ 694
Query: 835 ASVSAKAPSTTHLSNGGRKSK-AVMDDYESSDDDEDDERHFKRRPSRYEPSP 885
+S + S+ + K + +V + + S E+D H K + +E SP
Sbjct: 695 SSQDDELKSSMLKNKEDEKIRSSVEKENQKSKGQENDHVHEKNKKFDHESSP 746
Score = 50.4 bits (119), Expect = 2e-05
Identities = 62/289 (21%), Positives = 113/289 (38%), Gaps = 32/289 (11%)
Query: 607 SREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDY 666
+R+ + +K + ER + R+ KD + +V S +SK+K S D
Sbjct: 417 NRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKS-RSKSKEKSKSKERDS 475
Query: 667 HQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQ 726
NR+ +R S R+ E + +++SD +++E R R + + + + HD +
Sbjct: 476 KHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQE-RSRSKEKSKQLESKSNEHDHSK 534
Query: 727 HRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVT---------------- 770
+ R ++ S++ +TK +S +S+SR S V
Sbjct: 535 SKEKDRRAQSRSREC--DITKGKHSYNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHR 592
Query: 771 -KSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKL----SASS 825
+ + + S E R + R S SE E + + K K S SS
Sbjct: 593 YREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSS 652
Query: 826 TTEASTAATASVSAKAPSTTHLSNGGRKSKAVMDD------YESSDDDE 868
+ ++ + + +K+ + SN R+ KA D +SS DDE
Sbjct: 653 HRKENSESEKRMYSKS-RDHNSSNNSREKKADRDQSPFSKIKQSSQDDE 700
Score = 36.2 bits (82), Expect = 0.41
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 28/176 (15%)
Query: 586 PPPHRDLAEFSMGMNVPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSV 645
P PH D G + + RE E +K DA K E R+ S
Sbjct: 130 PTPHLDGHHVVFGQVISGQEVVRE-IENQKTDAASKPFAEVRI--------------LSC 174
Query: 646 GDVSSIKSKTKPIPPSSASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDR 705
G++ IP S + RH+S S SS + + ++ SD S+ E
Sbjct: 175 GEL---------IPKSKVKKEEKKRHKSSSSSSSSSS-DSDSSSDSQSSSDSSDSESATE 224
Query: 706 DRDYDYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPV---TKSTSRKSSEPDI 758
++ +H+ H + + +R + ASS+ + + +ST R P I
Sbjct: 225 EKSKKRKKKHRKNSRKHKKEKKKRKKSKKSASSESEAENLEAQPQSTVRPEEIPPI 280
>SFRF_HUMAN (O95104) Splicing factor, arginine/serine-rich 15
(CTD-binding SR-like protein RA4) (Fragment)
Length = 1157
Score = 53.5 bits (127), Expect = 2e-06
Identities = 91/392 (23%), Positives = 138/392 (34%), Gaps = 100/392 (25%)
Query: 425 TKVVSAPPQTSEHVKIPRA--GDVSEATHESKSVKEPV------SQGSAQVVEE-EVQQK 475
T VS PP + + IP + ++E T + S+ P+ ++G+A+ + ++
Sbjct: 758 TPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGS 817
Query: 476 LVPTEAGKKKKKKKVRMPTN-------------DFQWKPPHDLGAENYMMQMGPPPGYNP 522
VP A V P + Q LGA ++ + PPG P
Sbjct: 818 AVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPP 877
Query: 523 YWNGMQPCMDGF--MAPYAGPMHMMDYGHGP----YDMPFPNGMPHDPFANGMPHDPFGM 576
P + F M P P HMM G P + MP P+GM PF PH PF
Sbjct: 878 ------PHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMK-GPFP---PHGPFVR 927
Query: 577 QGYM------------------------MPPIPPPPHRDLAEFSMGMNVPPPAMSREEFE 612
G M P P P PPP+ +
Sbjct: 928 PGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQ 987
Query: 613 ARKADAR---RKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYHQN 669
+ R R++ N R + F + R FG V + + ++ + + N
Sbjct: 988 QQPQQFRNDNRQQFNSGRDQERFGR-RSFGNRVENDRERYGNRNDDRD---------NSN 1037
Query: 670 RHRSE--RPSPD-SSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQ 726
R R E R SPD HR++E +R S H +RER+ RDR+
Sbjct: 1038 RDRREWGRRSPDRDRHRDLE--ERNRRSSGHRDRERDSRDRE------------------ 1077
Query: 727 HRRHHHRTEASSKKSTDPVTKSTSRKSSEPDI 758
+ EA K+ + ++ K+ EP I
Sbjct: 1078 --SRREKEEARGKEKPEVTDRAGGNKTVEPPI 1107
Score = 35.8 bits (81), Expect = 0.53
Identities = 57/248 (22%), Positives = 92/248 (36%), Gaps = 37/248 (14%)
Query: 516 PPPGYNPYWNGMQPCMDGFMAPYAGPMHMMDYGHGPYDMPFPNGMPHDPFANGMPHDPFG 575
PPP P+ G DG P MD P G+ DP + +P P G
Sbjct: 323 PPPPQAPF--GFPG--DGMQQPAYTQHQNMDQFQ-----PRMMGIQQDPMHHQVPLPPNG 373
Query: 576 -MQGYMMPPIPP-PPHRDLAEFSMGMNVPPPAMSREEFEARKADARRKRENERRVERDFS 633
M G+ + P PP PP +PP ++ F+A + +NE ++
Sbjct: 374 QMPGFGLLPTPPFPPMAQPV-------IPPTPPVQQPFQASF-----QAQNEPLTQKPHQ 421
Query: 634 KDRDFGREVSSVGDVSSIKSKTKPIPPSSAS-DYHQNRHRSERPSPDSSHREVEPPRPTK 692
++ + E + +V S + SAS + R RS S S HR +
Sbjct: 422 QEMEV--EQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDR 479
Query: 693 RKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRK 752
R+ R +E RDR+ + +R Q + E +S ST ++
Sbjct: 480 RRHSPRSRSQERRDREKE-----------RERRQKGLPQVKPETASVCSTTLWVGQLDKR 528
Query: 753 SSEPDIKS 760
+++ D+ S
Sbjct: 529 TTQQDVAS 536
Score = 33.1 bits (74), Expect = 3.4
Identities = 24/95 (25%), Positives = 40/95 (41%), Gaps = 6/95 (6%)
Query: 752 KSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAADRKQKA---SVFSRISFPS 808
K P + + + +T L KT PT +E AA ++ A + R +
Sbjct: 223 KPQSPALDNAVMAQVQAITAQL---KTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDD 279
Query: 809 EEEAAAAAKKRKLSASSTTEASTAATASVSAKAPS 843
E EA +KK +A +TT + A + +A P+
Sbjct: 280 EPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPA 314
Score = 32.0 bits (71), Expect = 7.7
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Query: 516 PPPGYNPYWNGMQPCMDGFMAP--YAGPMHMMDYGHGPYDMPFPNGMPHDPFANGMPHDP 573
PPP P+ G P + G + P + P+ + G GP P P P PF +P
Sbjct: 688 PPPQVPPHQPG--PPVVGALQPPAFTPPLGIPPPGFGPGVPPPP---PPPPFLRP-GFNP 741
Query: 574 FGMQGYMMPPIPPPPHRDLAEFSMGMNVPPP 604
+ +PP PPPP + +++PPP
Sbjct: 742 MHLPPGFLPPGPPPP------ITPPVSIPPP 766
>SFR4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4
Length = 489
Score = 53.5 bits (127), Expect = 2e-06
Identities = 63/298 (21%), Positives = 107/298 (35%), Gaps = 27/298 (9%)
Query: 607 SREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDY 666
S +R +R+ R + SK R R G S KS+++ S S
Sbjct: 190 SHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRS----GSHSRSKSRSR-----SQSRS 240
Query: 667 HQNRHRSERPSPD--SSHREVEPPRPTKRKSDHSEREREDRD------------RDYDYH 712
+ +S PS D S R P + + DH+E + ++ D D
Sbjct: 241 RSKKEKSRSPSKDNKSRSRSRSPDKSRSKSKDHAEDKLQNNDSAGKAKSHSPSRHDSKSR 300
Query: 713 DRHQDRDYXHDRHQ---HRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPV 769
R Q+R +R + R ++ + K ++S SR S K K RK S
Sbjct: 301 SRSQERRAEEERRRSVSRARSQEKSRSQEKSLLKSRSRSRSRSRSRSKDKRKGRKRSRDE 360
Query: 770 TKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEA 829
++S S SK+ + + + +S + + S + + +K+R+ + + + +
Sbjct: 361 SRSRSRSKSERSRKHSSKRDSKVSSSSSSSKKKKDTDHSRSPSRSVSKEREHAKAESGQR 420
Query: 830 STAATASVSAKAPSTTHLSNGGRKSKA-VMDDYESSDDDEDDERHFKRRPSRYEPSPP 886
+ A A P S KSK V + S R + PSR P
Sbjct: 421 GSRAEGESEAPNPEPRARSRSTSKSKPNVPAESRSRSKSASKTRSRSKSPSRSASRSP 478
Score = 52.0 bits (123), Expect = 7e-06
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 26/196 (13%)
Query: 605 AMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSAS 664
A S+E+ +++ + R R R SKD+ GR+ S D S +S++K S S
Sbjct: 319 ARSQEKSRSQEKSLLKSRSRSRSRSRSRSKDKRKGRKRSR--DESRSRSRSK----SERS 372
Query: 665 DYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDR 724
H ++ S+ S SS ++ K+ +DHS R ++ H +
Sbjct: 373 RKHSSKRDSKVSSSSSSSKK-------KKDTDHSRSP-----------SRSVSKEREHAK 414
Query: 725 HQHRRHHHRTEASSK-KSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTS 783
+ + R E S+ + +P +S S S+P++ ++SR S+ +K+ S SK +P+ S
Sbjct: 415 AESGQRGSRAEGESEAPNPEPRARSRSTSKSKPNVPAESRSRSKSASKTRSRSK-SPSRS 473
Query: 784 AEAAAAAAADRKQKAS 799
A + + + R S
Sbjct: 474 ASRSPSRSRSRSHSRS 489
Score = 51.6 bits (122), Expect = 9e-06
Identities = 66/280 (23%), Positives = 102/280 (35%), Gaps = 21/280 (7%)
Query: 608 REEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYH 667
R+ E ADA + R+NE +E D E +V+ K + P S
Sbjct: 125 RQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRS 184
Query: 668 QNRHRS-ERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQ 726
+R RS R S H R KS HS+ R + R H R +
Sbjct: 185 YSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSK-------------SRSRSRSGSHSRSK 231
Query: 727 HR-RHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAE 785
R R R+ + +KS P + SR S KS+S+ K L A+
Sbjct: 232 SRSRSQSRSRSKKEKSRSPSKDNKSRSRSRSPDKSRSKSKDHAEDK---LQNNDSAGKAK 288
Query: 786 AAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVS-AKAPST 844
+ + + D K ++ R + EE + ++ R S + E S + S S +++ S
Sbjct: 289 SHSPSRHDSKSRSRSQERRA--EEERRRSVSRARSQEKSRSQEKSLLKSRSRSRSRSRSR 346
Query: 845 THLSNGGRKSKAVMDDYESSDDDEDDERHFKRRPSRYEPS 884
+ GRK S E +H +R S+ S
Sbjct: 347 SKDKRKGRKRSRDESRSRSRSKSERSRKHSSKRDSKVSSS 386
Score = 49.3 bits (116), Expect = 5e-05
Identities = 58/254 (22%), Positives = 93/254 (35%), Gaps = 15/254 (5%)
Query: 607 SREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPS----- 661
S++E + + R R ++ SK +D + D + K K PS
Sbjct: 242 SKKEKSRSPSKDNKSRSRSRSPDKSRSKSKDHAEDKLQNNDSAG---KAKSHSPSRHDSK 298
Query: 662 SASDYHQNRHRSERPSPDSSHREVEPPRPTKRK--SDHSEREREDRDRDYDYHD-RHQDR 718
S S + R ER S R E R ++ S R R D R + R
Sbjct: 299 SRSRSQERRAEEERRRSVSRARSQEKSRSQEKSLLKSRSRSRSRSRSRSKDKRKGRKRSR 358
Query: 719 DYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKT 778
D R + + R +S + S + S+S+K + D SR S V+K +K
Sbjct: 359 DESRSRSRSKSERSRKHSSKRDSKVSSSSSSSKKKKDTD---HSRSPSRSVSKEREHAKA 415
Query: 779 APTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVS 838
A + + SR + S+ A ++ R SAS T S + + S S
Sbjct: 416 ESGQRGSRAEGESEAPNPEPRARSRSTSKSKPNVPAESRSRSKSASKTRSRSKSPSRSAS 475
Query: 839 AKAPSTTHLSNGGR 852
++PS + + R
Sbjct: 476 -RSPSRSRSRSHSR 488
>YOW5_CAEEL (P30651) Hypothetical protein ZK643.5 in chromosome III
Length = 487
Score = 53.1 bits (126), Expect = 3e-06
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 7/193 (3%)
Query: 633 SKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYHQNRHRSERPSPDSSHREVEPPRPTK 692
S+ RD + SS SS S + S +S R R +R P + R +
Sbjct: 243 SRGRDTRKRRSS--SYSSTSSSSDGRSRSRSSSRSDRRRRDDRKRPREDRDRKDYRRDGR 300
Query: 693 RKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRK 752
R +R+R D DR D + R D+D + Q + + + S D + + +K
Sbjct: 301 RDGRRDDRKRHD-DRRRDSYHRDSDKDIKRRKEQSKHSAMESAKALGLSNDYIDQVNEQK 359
Query: 753 SSEPDIKSKSRKSSEPVTKSLSLSKTAPTT-SAEAAAAAAADRKQKASVFSRISFPSEEE 811
+I RK E +S K PTT S ++AA A+ K K + ++ ++
Sbjct: 360 RKREEI---VRKKEERRHAPVSEKKEVPTTVSTNTSSAAYANSKDKTKAYLAVNVTGVQQ 416
Query: 812 AAAAAKKRKLSAS 824
A KK + AS
Sbjct: 417 LPTAVKKIEAIAS 429
>SR40_YEAST (P32583) Suppressor protein SRP40
Length = 406
Score = 53.1 bits (126), Expect = 3e-06
Identities = 49/272 (18%), Positives = 102/272 (37%), Gaps = 7/272 (2%)
Query: 601 VPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPP 660
VP ++ +E E + + + + S SS G+ SS S +
Sbjct: 11 VPKLSVKEKEIEEKSSSSSSSSSSSS------SSSSSSSSSSSSSGESSSSSSSSSSSSS 64
Query: 661 SSASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDY 720
S +SD + S S SS + S D + +
Sbjct: 65 SDSSDSSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESED 124
Query: 721 XHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSE-PDIKSKSRKSSEPVTKSLSLSKTA 779
+ + + + K T+P + S+S SS S+S SE + S S S ++
Sbjct: 125 ETKKRARESDNEDAKETKKAKTEPESSSSSESSSSGSSSSSESESGSESDSDSSSSSSSS 184
Query: 780 PTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVSA 839
+ +++ + + + +S S S S ++++ + S+SS++++ + + +S +
Sbjct: 185 SDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDS 244
Query: 840 KAPSTTHLSNGGRKSKAVMDDYESSDDDEDDE 871
+ ++ S+ S +SSD D D +
Sbjct: 245 DSSGSSDSSSSSDSSSDESTSSDSSDSDSDSD 276
Score = 50.1 bits (118), Expect = 3e-05
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 736 ASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAADRK 795
AS K D V K S K E + KS S SS + S S S ++ ++S+ ++++++
Sbjct: 2 ASKKIKVDEVPK-LSVKEKEIEEKSSSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSS 60
Query: 796 QKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVSAKAPSTTHLSNGGRKSK 855
+S S S SE +++++ S+SS +E+S+ + +S S + S++ S+
Sbjct: 61 SSSSSDSSDSSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSES 120
Query: 856 AVMDDYESSDDDEDDERHFKRRPSRYEP 883
D+ + + D+E + + ++ EP
Sbjct: 121 ESEDETKKRARESDNEDAKETKKAKTEP 148
Score = 42.0 bits (97), Expect = 0.007
Identities = 51/225 (22%), Positives = 80/225 (34%), Gaps = 13/225 (5%)
Query: 607 SREEFEARKADARRKRENERRVERDFSK-----DRDFGREVSSVGDVSSIKSKTKPIPPS 661
S E E+ +R RE++ ++ K + E SS G SS +S++ S
Sbjct: 116 SSSESESEDETKKRARESDNEDAKETKKAKTEPESSSSSESSSSGSSSSSESESGSESDS 175
Query: 662 SASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYX 721
+S + SE S S S D D D
Sbjct: 176 DSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSD 235
Query: 722 HDRHQHRRHHHRTEASSKKSTDPVT-KSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAP 780
D + S S+D + +STS SS+ D S S SSE TK TA
Sbjct: 236 SDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSELETK----EATAD 291
Query: 781 TTSAEAAAAAAADRKQKASVFS---RISFPSEEEAAAAAKKRKLS 822
+ AE A++ + AS S +++ P+ + +++ S
Sbjct: 292 ESKAEETPASSNESTPSASSSSSANKLNIPAGTDEIKEGQRKHFS 336
>PPIG_RAT (O55035) Peptidyl-prolyl cis-trans isomerase G (EC
5.2.1.8) (Peptidyl-prolyl isomerase G) (PPIase G)
(Rotamase G) (Cyclophilin G) (Matrin cyclophilin)
(Matrin-cyp)
Length = 752
Score = 53.1 bits (126), Expect = 3e-06
Identities = 54/268 (20%), Positives = 107/268 (39%), Gaps = 8/268 (2%)
Query: 615 KADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDYHQNRHRSE 674
K + ER + R+ KD + + S +SK+K S D +RH +
Sbjct: 423 KVKDHKLESKERDIRRNSGKDDKYNKNKVKKRGKSKSRSKSKERSKSKERDSKHSRHEDK 482
Query: 675 RPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQHRRHHHRT 734
R S R+ E + +++ D +++E R R + + + + HD + + R
Sbjct: 483 RVRSRSKERDHETTKEKEKQLDSKGKDQE-RSRSKENSKQVESKSNEHDHSKSKEKDRRA 541
Query: 735 EASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAADR 794
++ S++ +TKS +S +S+SR S V +S S + + R
Sbjct: 542 QSRSRER--DLTKSKHSYNSRTRERSRSRDRSRRV-RSRSHDRDRSRSKEYHRYREQEYR 598
Query: 795 KQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAAT----ASVSAKAPSTTHLSNG 850
++ S P + ++R+ S SS E S + S +K+ S G
Sbjct: 599 RRGRSRSRDRRTPGRSRSKDRRRRRRDSRSSEREESQSRNKEKYRSQDSKSSHRKENSEG 658
Query: 851 GRKSKAVMDDYESSDDDEDDERHFKRRP 878
++ + D+ SS+++ + + + P
Sbjct: 659 EKRMYSKSRDHSSSNNNREKKADIDQSP 686
Score = 32.3 bits (72), Expect = 5.9
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 19/143 (13%)
Query: 613 ARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKT---KPIPPSSASDYHQN 669
+R D RR+R + R ER+ S+ R+ + S S K + K + S N
Sbjct: 614 SRSKDRRRRRRDSRSSEREESQSRNKEKYRSQDSKSSHRKENSEGEKRMYSKSRDHSSSN 673
Query: 670 RHRSERPSPDSSHREVEPPRPTKRKSDHSE------REREDRD-----RDYDYHDRHQDR 718
+R ++ D S P TK+ S +E + +ED + + Q+
Sbjct: 674 NNREKKADIDQS-----PVSKTKQSSQDNEVKSSTLKNQEDEKTRSPVEKENQKSKGQEN 728
Query: 719 DYXHDRHQHRRHHHRTEASSKKS 741
D+ HD+++ H KS
Sbjct: 729 DHVHDKNKKCDHESSPGTDEDKS 751
Score = 31.6 bits (70), Expect = 10.0
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 607 SREEFEARKADARRKRENERRVERDFSKDRDF-----GREVSSVGDVSSIKSKTK----- 656
++E++ ++ + + ++EN +R +SK RD RE + D S + SKTK
Sbjct: 638 NKEKYRSQDSKSSHRKENSEGEKRMYSKSRDHSSSNNNREKKADIDQSPV-SKTKQSSQD 696
Query: 657 -PIPPSSASDYHQNRHRS--ERPSPDSSHREVEPPRPTKRKSDHSEREREDRDR 707
+ S+ + + RS E+ + S +E + +K DH D D+
Sbjct: 697 NEVKSSTLKNQEDEKTRSPVEKENQKSKGQENDHVHDKNKKCDHESSPGTDEDK 750
>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein
precursor (KAHRP)
Length = 657
Score = 53.1 bits (126), Expect = 3e-06
Identities = 73/349 (20%), Positives = 132/349 (36%), Gaps = 50/349 (14%)
Query: 548 GHGPYDMPFPNGMPHDPFANGMPHDPFGMQGYMMPPIPPPPHRDLAEFSM-------GMN 600
G+G Y+ P+ G P +NGM + GY P P + +S G +
Sbjct: 300 GYG-YEAPYNPGFNGAPGSNGMQNYVHPWSGYSAPYGVPHGAAHGSRYSSFSSVNKYGKH 358
Query: 601 VPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPP 660
S ++ E + +K+++++ + D K + ++ D S+KSK
Sbjct: 359 GDEKHHSSKKHEGNDGEGEKKKKSKKHKDHDGEKKKS--KKHKDNEDAESVKSKK----- 411
Query: 661 SSASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDY----------- 709
H++ ++ S H++ E K K +RE+ ++++
Sbjct: 412 ------HKSHDCEKKKS--KKHKDNEDAESVKSKKVLKKREKSIMEKNHAAKKLTKKIKI 463
Query: 710 --DYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSE 767
++ D H++ ++ + E ST KST+ ++ P K K++
Sbjct: 464 KKKTNNSKSDGSKAHEKKENETKNTAGENKKVDSTSADNKSTN--AATPGAKDKTQGGK- 520
Query: 768 PVTKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTT 827
T S A T + AA A K + S+ + + A K+ S +T
Sbjct: 521 --TDKTGASTNAATNKGQCAAEGATKGATKEASTSKEATKEASTSKEATKEASTSKEATK 578
Query: 828 EAST-------AATASVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDED 869
EAST A+T + K STT S G + A + +S D+ D
Sbjct: 579 EASTSKGATKEASTTEGATKGASTTAGSTTGATTGA--NAVQSKDETAD 625
Score = 35.0 bits (79), Expect = 0.90
Identities = 18/94 (19%), Positives = 33/94 (34%), Gaps = 5/94 (5%)
Query: 668 QNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRHQH 727
Q +H H + + P ++ H E + H + +D H H H
Sbjct: 58 QKQHEHHHHHHHHHHHQHQAPHQAPHQAHHHHHHGEVNHQAPQVHQQVHGQDQAHHHHHH 117
Query: 728 RRHHHRTE-----ASSKKSTDPVTKSTSRKSSEP 756
HH + ++ S +PV K+ + + P
Sbjct: 118 HHHHLHPQQPQGTVANPPSNEPVVKTQVFREARP 151
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 53.1 bits (126), Expect = 3e-06
Identities = 61/299 (20%), Positives = 114/299 (37%), Gaps = 20/299 (6%)
Query: 608 REEFEARKADARRKRENE--------RRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIP 659
R+E A+K +R+RE + ++ + S++ D E S + + K
Sbjct: 31 RKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRAKSES 90
Query: 660 PSSASDYHQNRHRSE-RPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDR 718
S SD ++R +S+ + D +E +K+K S E ED D + + + + +
Sbjct: 91 ESDESDEEEDRKKSKSKKKVDQKKKE-----KSKKKRTTSSSEDEDSDEEREQKSKKKSK 145
Query: 719 DYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKT 778
E KKS KS +++ + + K S+ K L
Sbjct: 146 KTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAK 205
Query: 779 APTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAK--KRKLSASSTTEASTAATAS 836
+ + S K+K+ + SE+EA K KRK S +S+ E+S + +
Sbjct: 206 SESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSD 265
Query: 837 VSAKAPSTTHLSNGGRKSKAVMDDYESSDDDEDDERHFKRRPSRYEPSPPPPVDDWVEE 895
+ S+ K K + + S D+E +E + P + + + D +E
Sbjct: 266 EEEEEKE----SSPKPKKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAVTLISDSEDE 320
Score = 52.4 bits (124), Expect = 5e-06
Identities = 63/310 (20%), Positives = 118/310 (37%), Gaps = 22/310 (7%)
Query: 586 PPPHRDLAEFSMGMNVPPPAMSREEFEARKADARRKR--ENERRVERDFSKDRDFGREVS 643
PPP + A+ + EE + + RKR E D +DR +
Sbjct: 49 PPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKK 108
Query: 644 SVGDVSSIKSKTKPIPPSSA-SDYHQNRH--------RSERPSPDSSHREVEPPRPTKRK 694
V KSK K SS D + R ++++ + S E E R K+
Sbjct: 109 KVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKS 168
Query: 695 SDHSEREREDRDRDYDYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSS 754
+ E+ + R + D +D + + ++E+ S+ + K + +KS
Sbjct: 169 KKNKEKSVKKRAETSEESD--EDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSK 226
Query: 755 EPDIKSKSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAA 814
+ K + P K K + T+S E++ + +D +++ + S P ++
Sbjct: 227 KVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEE----EKESSPKPKKKKP 282
Query: 815 AAKKRKLSASSTTEASTAATASVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDEDDERHF 874
A K KLS+ +E S K + T +S+ S+ D S+ + +E+
Sbjct: 283 LAVK-KLSSDEESEESDVEVLPQKKKRGAVTLISD----SEDEKDQKSESEASDVEEKVS 337
Query: 875 KRRPSRYEPS 884
K++ + E S
Sbjct: 338 KKKAKKQESS 347
>TOP1_DROME (P30189) DNA topoisomerase I (EC 5.99.1.2)
Length = 972
Score = 52.4 bits (124), Expect = 5e-06
Identities = 62/283 (21%), Positives = 101/283 (34%), Gaps = 23/283 (8%)
Query: 607 SREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPIPPSSASDY 666
S + ++ D R RE E + S ++ S S +K D
Sbjct: 44 SSSKHKSSSKDKHRDREREHKSSNSSSSSKEHKSSSRDKDRHKSSSSSSKHRDKDKERDG 103
Query: 667 HQNRHRSERPSPDSSHREVEPPRPTKRKSDHS---------EREREDRDRDYDYHDRHQD 717
N HRS SSH++ + +K KS ER +D+DR RH+
Sbjct: 104 SSNSHRS---GSSSSHKDKDGSSSSKHKSSSGHHKRSSKDKERRDKDKDRGSSSSSRHKS 160
Query: 718 RDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSR--KSSEPVTKSLSL 775
D+ + H + +SS + + S SS D S EPV++ L
Sbjct: 161 SSSSRDKERSSSSHKSSSSSSSSKSKHSSSRHSSSSSSKDHPSYDGVFVKPEPVSQQLMH 220
Query: 776 SKTAPTTSAE-----AAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEAS 830
S + + AAAA + +V EE+ KK + S ++ ++AS
Sbjct: 221 SGSVDAFQMQQLGSYEAAAAGTNFNGNGNVAGANYKNGYEESIVDIKKEEESFNNLSQAS 280
Query: 831 TAATASVSAKA---PSTTHLSNGGRKSKAVMDDYESSDDDEDD 870
+ + +A P + + M +Y DDD D+
Sbjct: 281 SCDYSMSQFRADEPPFVVKHEQSYAEEDSTM-NYNDHDDDADE 322
Score = 46.2 bits (108), Expect = 4e-04
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 20/182 (10%)
Query: 649 SSIKSKTKPIPPSSASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRD 708
SS SK K SS+ D H++R R + S SS K S +DR +
Sbjct: 42 SSSSSKHK----SSSKDKHRDREREHKSSNSSS----------SSKEHKSSSRDKDRHKS 87
Query: 709 YDYHDRHQDRDYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEP 768
+H+D+D D + HR+ +SS + S+ KSS K R S +
Sbjct: 88 SSSSSKHRDKDKERDGSS---NSHRSGSSSSHKDKDGSSSSKHKSSSGHHK---RSSKDK 141
Query: 769 VTKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTE 828
+ + + ++S +++++ D+++ +S S S ++ ++ + S+SS
Sbjct: 142 ERRDKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKHSSSRHSSSSSSKDH 201
Query: 829 AS 830
S
Sbjct: 202 PS 203
Score = 41.6 bits (96), Expect = 0.010
Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 666 YHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRH 725
+H + H S S S H+ + R+ +H +++ R +DR
Sbjct: 34 HHHHHHSSS--SSSSKHKSSSKDKHRDREREHKSSNSSSSSKEHKSSSRDKDR------- 84
Query: 726 QHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKTAPTTSAE 785
H++ +SS K D K E D S S +S S S K +S+
Sbjct: 85 ------HKSSSSSSKHRD--------KDKERDGSSNSHRSG-----SSSSHKDKDGSSSS 125
Query: 786 AAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVSAKAPSTT 845
+++ K+ + R + ++++++ + S+S E S+++ S S+ + S +
Sbjct: 126 KHKSSSGHHKRSSKDKERRDKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKS 185
Query: 846 HLSNGGRKSKAVMDDYESSD 865
S+ S + D+ S D
Sbjct: 186 KHSSSRHSSSSSSKDHPSYD 205
Score = 35.4 bits (80), Expect = 0.69
Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 8/169 (4%)
Query: 709 YDYHDRHQDRDYXHDRHQHR-RHHHRTEASSKKSTDPVTKSTSRKSSEPD-------IKS 760
+ +H H +H+ + HR KS++ + S KSS D S
Sbjct: 32 HGHHHHHHSSSSSSSKHKSSSKDKHRDREREHKSSNSSSSSKEHKSSSRDKDRHKSSSSS 91
Query: 761 KSRKSSEPVTKSLSLSKTAPTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRK 820
+ + S S + ++S+ ++ K K+S ++E K R
Sbjct: 92 SKHRDKDKERDGSSNSHRSGSSSSHKDKDGSSSSKHKSSSGHHKRSSKDKERRDKDKDRG 151
Query: 821 LSASSTTEASTAATASVSAKAPSTTHLSNGGRKSKAVMDDYESSDDDED 869
S+SS ++S+++ + + + S+ KSK + SS +D
Sbjct: 152 SSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKHSSSRHSSSSSSKD 200
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1
snRNP 70 kDa) (snRNP70) (U1-70K)
Length = 471
Score = 52.4 bits (124), Expect = 5e-06
Identities = 46/199 (23%), Positives = 73/199 (36%), Gaps = 31/199 (15%)
Query: 590 RDLAEFSMGMNVPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVS 649
RD E S P R R+ +R + + ER+ R+ SKD+D ++ +
Sbjct: 231 RDRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREKSKDKDKEKDKDNKDRDR 290
Query: 650 SIKSKTKPIPPSSASDYHQNRHRSERPSP-----------------DSSHREVEPPRPTK 692
+S+++ D + R E P D + EP ++
Sbjct: 291 KRRSRSRERKRERDRDREKKEERVEAEVPEADDAPQDDAQIGDLGIDGIELKQEPEEKSR 350
Query: 693 RKSDHSERERE--------DRDRDYDYH------DRHQDRDYXHDRHQHRRHHHRTEASS 738
+ +R+RE DRDRD D DR +DRD DR + R +
Sbjct: 351 ERDRERDRDREKGEKDRDKDRDRDRDRRRSHRDRDREKDRDRDRDRRRDRDRDRERDKDH 410
Query: 739 KKSTDPVTKSTSRKSSEPD 757
K+ D +S R+ PD
Sbjct: 411 KRERDRGDRSEKREERVPD 429
>KNOB_PLAFG (P09346) Knob-associated histidine-rich protein
precursor (KAHRP) (KP)
Length = 634
Score = 52.0 bits (123), Expect = 7e-06
Identities = 65/324 (20%), Positives = 119/324 (36%), Gaps = 18/324 (5%)
Query: 548 GHGPYDMPFPNGMPHDPFANGMPH--DPFGMQGYMMPPIPPPPHRDLAEFSM-------G 598
G+G Y+ P+ G P +NGM + P G GY P P + +S G
Sbjct: 296 GYG-YEAPYNPGFNGAPGSNGMQNYVPPHGA-GYSAPYGVPHGAAHGSRYSSFSSVNKYG 353
Query: 599 MNVPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVGDVSSIKSKTKPI 658
+ S ++ E + +K+++++ + D K + ++ D S+KSK
Sbjct: 354 KHGDEKHHSSKKHEGNDGEGEKKKKSKKHKDHDGEKKKS--KKHKDNEDAESVKSKKHKS 411
Query: 659 PPSSASDYHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDR 718
+++ + S S E K S++ E+ ++ D
Sbjct: 412 HDCEKKKSKKHKDNEDAESVKSKKSVKEKGEKHNGKKPCSKKTNEENKNKEKTNNLKSDG 471
Query: 719 DYXHDRHQHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEPVTKSLSLSKT 778
H++ ++ + E ST KST+ ++ P K K++ T S
Sbjct: 472 SKAHEKKENETKNTAGENKKVDSTSADNKSTN--AATPGAKDKTQGGK---TDKTGASTN 526
Query: 779 APTTSAEAAAAAAADRKQKASVFSRISFPSEEEAAAAAKKRKLSASSTTEASTAATASVS 838
A T + AA A K + S+ + + A K+ + +T AST A ++
Sbjct: 527 AATNKGQCAAEGATKGATKEASTSKEATKEASTSKGATKEASTTEGATKGASTTAGSTTG 586
Query: 839 AKAPSTTHLSNGGRKSKAVMDDYE 862
A + S G K ++ E
Sbjct: 587 ATTGANAVQSKDGTADKNAANNGE 610
Score = 32.7 bits (73), Expect = 4.5
Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 21/103 (20%)
Query: 666 YHQNRHRSERPSPDSSHREVEPPRPTKRKSDHSEREREDRDRDYDYHDRHQDRDYXHDRH 725
+H ++H+ + +P +H H E + H + +D H H
Sbjct: 66 HHHHQHQHQHQAPHQAH--------------HHHHHGEVNHQAPQVHQQVHGQDQAH--H 109
Query: 726 QHRRHHHRTEASSKKSTDPVTKSTSRKSSEPDIKSKSRKSSEP 768
H HHH+ + + T + S+EP +K++ + + P
Sbjct: 110 HHHHHHHQLQPQQLQGT-----VANPPSNEPVVKTQVFREARP 147
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.312 0.130 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,457,924
Number of Sequences: 164201
Number of extensions: 5715475
Number of successful extensions: 32394
Number of sequences better than 10.0: 939
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 766
Number of HSP's that attempted gapping in prelim test: 24708
Number of HSP's gapped (non-prelim): 6580
length of query: 908
length of database: 59,974,054
effective HSP length: 119
effective length of query: 789
effective length of database: 40,434,135
effective search space: 31902532515
effective search space used: 31902532515
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 70 (31.6 bits)
Medicago: description of AC119408.8