BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149600.2 + phase: 0 /pseudo
(91 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006342.1| ORF2 [Agrotis segetum granulovirus] gi|46200669... 42 0.005
gb|EAK89134.1| apicomplexan specific region near N-terminus [Cry... 39 0.033
gb|AAK14463.1| EsV-1-37 [Ectocarpus siliculosus virus] gi|132425... 38 0.056
ref|NP_473395.1| bromodomain, testis-specific [Mus musculus] gi|... 36 0.21
ref|XP_476537.1| hypothetical protein [Oryza sativa (japonica cu... 36 0.28
gb|EAK88176.1| signal peptide containing large protein with prol... 35 0.47
ref|YP_004347.1| serine protease [Thermus thermophilus HB27] gi|... 34 0.80
ref|XP_642074.1| hypothetical protein DDB0204371 [Dictyostelium ... 34 1.0
gb|AAS47584.1| chloroplast Toc64-1 [Physcomitrella patens] 34 1.0
ref|NP_059094.1| diaphanous homolog 2 [Mus musculus] gi|26353692... 33 1.4
gb|AAQ82539.1| DIA3 [Mus musculus] 33 1.4
sp|O70566|DIAP2_MOUSE Diaphanous protein homolog 2 (Diaphanous-r... 33 1.4
gb|AAY54714.1| IP04662p [Drosophila melanogaster] 33 1.4
dbj|BAC38832.1| unnamed protein product [Mus musculus] 33 1.4
emb|CAC18142.1| related to c-module-binding factor [Neurospora c... 33 1.8
gb|EAL01304.1| hypothetical protein CaO19.7961 [Candida albicans... 33 1.8
gb|AAS85781.1| endo-1,4-beta-xylanase precursor [uncultured bact... 33 1.8
ref|XP_637717.1| hypothetical protein DDB0186939 [Dictyostelium ... 33 2.3
ref|XP_285987.4| PREDICTED: RIKEN cDNA 6430526N21 gene [Mus musc... 33 2.3
gb|AAX81992.1| unknown [Homo sapiens] gi|7022415|dbj|BAA91590.1|... 32 3.1
>ref|YP_006342.1| ORF2 [Agrotis segetum granulovirus] gi|46200669|gb|AAS82736.1| ORF2
[Agrotis segetum granulovirus]
Length = 222
Score = 41.6 bits (96), Expect = 0.005
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDVENSSWESSSQDS 90
PPPPPPPP PT+ GV V+E + T S VEN S+ SSS DS
Sbjct: 140 PPPPPPPPHQTLPTY-GVPTVVEEK--TDKESNVVENPSFYSSSFDS 183
>gb|EAK89134.1| apicomplexan specific region near N-terminus [Cryptosporidium
parvum] gi|67593947|ref|XP_665762.1| hypothetical
protein Chro.30188 [Cryptosporidium hominis]
gi|54656586|gb|EAL35532.1| hypothetical protein
Chro.30188 [Cryptosporidium hominis]
gi|66359104|ref|XP_626730.1| hypothetical protein
cgd3_1560 [Cryptosporidium parvum]
Length = 198
Score = 38.9 bits (89), Expect = 0.033
Identities = 18/47 (38%), Positives = 24/47 (50%), Gaps = 3/47 (6%)
Query: 44 PPPPPPPPSCVF---PTFTGVVKVMENQNNTSSFSVDVENSSWESSS 87
PPPPPPPP V T + + N NN ++ E+S W S+S
Sbjct: 149 PPPPPPPPPPVLRHSVTASATIPSSSNSNNIDLIDLNCEHSKWNSNS 195
>gb|AAK14463.1| EsV-1-37 [Ectocarpus siliculosus virus]
gi|13242509|ref|NP_077522.1| EsV-1-37 [Ectocarpus
siliculosus virus]
Length = 210
Score = 38.1 bits (87), Expect = 0.056
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQNNTSS----FSVDVENSSWESSSQDSS 91
PPPPPP P+ V P+ T V V +NT S F VD +NS+ S S ++S
Sbjct: 95 PPPPPPSPTLVVPSPT--VSVSSISSNTRSLVLNFGVDDDNSTTSSGSGNNS 144
>ref|NP_473395.1| bromodomain, testis-specific [Mus musculus]
gi|13957951|gb|AAK50736.1| bromodomain-containing female
sterile homeotic-like protein [Mus musculus]
Length = 956
Score = 36.2 bits (82), Expect = 0.21
Identities = 18/48 (37%), Positives = 26/48 (53%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDVENSSWESSSQDSS 91
PPPPPPPP P ++ ++ +++ S S +SS SSS SS
Sbjct: 627 PPPPPPPPPPPPPELASGSRLTDSSSSSGSGSGSSSSSSGSSSSSSSS 674
>ref|XP_476537.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50509304|dbj|BAD30611.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|34393417|dbj|BAC82951.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 85
Score = 35.8 bits (81), Expect = 0.28
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDVENSSWESSSQDSS 91
PPPPPPPP + T G+ ++ + + + +S V +++W + + S
Sbjct: 29 PPPPPPPPELLGSTTAGIARIHHRRRSPALYS-PVFSTTWSRADHECS 75
>gb|EAK88176.1| signal peptide containing large protein with proline stretches
[Cryptosporidium parvum] gi|66357582|ref|XP_625969.1|
hypothetical protein cgd5_40 [Cryptosporidium parvum]
Length = 1884
Score = 35.0 bits (79), Expect = 0.47
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 44 PPPPPPPPSCVFPT--FTGVVKVMENQNNTSSFSVDVENSSWESS 86
PPPPPPPPS P+ + EN+N +VD + S W SS
Sbjct: 1193 PPPPPPPPSYTSPSNGIPSHIPTRENENWNPGPTVD-KTSQWGSS 1236
>ref|YP_004347.1| serine protease [Thermus thermophilus HB27]
gi|46196303|gb|AAS80720.1| serine protease [Thermus
thermophilus HB27]
Length = 458
Score = 34.3 bits (77), Expect = 0.80
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 44 PPPPPPPPSCVFPTFTG 60
PPPPPPPPS PT TG
Sbjct: 34 PPPPPPPPSTCTPTATG 50
>ref|XP_642074.1| hypothetical protein DDB0204371 [Dictyostelium discoideum]
gi|60470203|gb|EAL68183.1| hypothetical protein
DDB0204371 [Dictyostelium discoideum]
Length = 456
Score = 33.9 bits (76), Expect = 1.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 43 YPPPPPPPPSCVFP----TFTGVVKVMENQNNTSSFSVDVENSSWESSSQDSS 91
YPPPPPPPP+ P ++ + Q+ +SF +V ++ + S Q ++
Sbjct: 107 YPPPPPPPPTVPPPPPPLPSNNTIEQQQQQHYNNSFQSNVPYNNQQHSPQQTT 159
>gb|AAS47584.1| chloroplast Toc64-1 [Physcomitrella patens]
Length = 592
Score = 33.9 bits (76), Expect = 1.0
Identities = 15/48 (31%), Positives = 25/48 (51%), Gaps = 1/48 (2%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDVENSSWESSSQDSS 91
PPPPPPPPS P +G+ +++ + F N W S+ + ++
Sbjct: 49 PPPPPPPPSAPHP-LSGLTFAIKDIFDIEGFVTGFGNPDWASTHEPAT 95
>ref|NP_059094.1| diaphanous homolog 2 [Mus musculus] gi|26353692|dbj|BAC40476.1|
unnamed protein product [Mus musculus]
Length = 1112
Score = 33.5 bits (75), Expect = 1.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 45 PPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDV 78
PPPPPPP VFP +G +++ + D+
Sbjct: 600 PPPPPPPGGVFPLLSGPIELPYGMKQKKLYKPDI 633
>gb|AAQ82539.1| DIA3 [Mus musculus]
Length = 1102
Score = 33.5 bits (75), Expect = 1.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 45 PPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDV 78
PPPPPPP VFP +G +++ + D+
Sbjct: 604 PPPPPPPGGVFPLLSGPIELPYGMKQKKLYKPDI 637
>sp|O70566|DIAP2_MOUSE Diaphanous protein homolog 2 (Diaphanous-related formin 2) (DRF2)
(mDia3)
Length = 1098
Score = 33.5 bits (75), Expect = 1.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 45 PPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDV 78
PPPPPPP VFP +G +++ + D+
Sbjct: 600 PPPPPPPGGVFPLLSGPIELPYGMKQKKLYKPDI 633
>gb|AAY54714.1| IP04662p [Drosophila melanogaster]
Length = 209
Score = 33.5 bits (75), Expect = 1.4
Identities = 20/48 (41%), Positives = 26/48 (53%), Gaps = 4/48 (8%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDVENSSWESSSQDSS 91
P P PPPPSC T + +++ TSS S + NSS SSS+ S
Sbjct: 74 PDPHPPPPSCSRSTSSS----NSSRSTTSSSSSNTTNSSSSSSSRHHS 117
>dbj|BAC38832.1| unnamed protein product [Mus musculus]
Length = 824
Score = 33.5 bits (75), Expect = 1.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 45 PPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDV 78
PPPPPPP VFP +G +++ + D+
Sbjct: 326 PPPPPPPGGVFPLLSGPIELPYGMKQKKLYKPDI 359
>emb|CAC18142.1| related to c-module-binding factor [Neurospora crassa]
gi|32415027|ref|XP_327993.1| hypothetical protein (
(AL451012) related to c-module-binding factor [Neurospora
crassa] ) gi|28917312|gb|EAA27021.1| hypothetical protein
( (AL451012) related to c-module-binding factor
[Neurospora crassa] )
Length = 1458
Score = 33.1 bits (74), Expect = 1.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 42 RYPPPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDVENSSWESSSQDS 90
R P PPPPPP PT VV++M+ ++ S + S S +S
Sbjct: 1343 RSPSPPPPPPKPAGPT---VVRLMDTEDEESDYGGSYSGSRSPSQRSES 1388
>gb|EAL01304.1| hypothetical protein CaO19.7961 [Candida albicans SC5314]
gi|46441874|gb|EAL01168.1| hypothetical protein
CaO19.329 [Candida albicans SC5314]
Length = 455
Score = 33.1 bits (74), Expect = 1.8
Identities = 16/44 (36%), Positives = 22/44 (49%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDVENSSWESSS 87
PPPPPPP F KV+ + S S +++N+ SSS
Sbjct: 395 PPPPPPPVRSALVNFENNSKVLLTKEKEESGSSELKNTGESSSS 438
>gb|AAS85781.1| endo-1,4-beta-xylanase precursor [uncultured bacterium]
Length = 1395
Score = 33.1 bits (74), Expect = 1.8
Identities = 17/46 (36%), Positives = 21/46 (44%), Gaps = 6/46 (13%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQN------NTSSFSVDVENSSW 83
PPPPPPPP+ P TG V +N T S N++W
Sbjct: 639 PPPPPPPPAAPTPPSTGAVSSKTYRNMFKEWGKTDSEITTKVNTAW 684
>ref|XP_637717.1| hypothetical protein DDB0186939 [Dictyostelium discoideum]
gi|60466151|gb|EAL64214.1| hypothetical protein
DDB0186939 [Dictyostelium discoideum]
Length = 374
Score = 32.7 bits (73), Expect = 2.3
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 44 PPPPPPPPSCVF--PTF---TGVVKVMENQNNTSSFSVDVENSSWESSSQ 88
PPPPPPPP V P+F GV N NN +S + + N++ + Q
Sbjct: 254 PPPPPPPPITVVKQPSFLMKKGVNNNNNNNNNNNSSNTNDSNNTNNTKPQ 303
>ref|XP_285987.4| PREDICTED: RIKEN cDNA 6430526N21 gene [Mus musculus]
Length = 756
Score = 32.7 bits (73), Expect = 2.3
Identities = 17/48 (35%), Positives = 24/48 (49%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQNNTSSFSVDVENSSWESSSQDSS 91
PPP PPPP +P + E +++SS S +SS SSS +
Sbjct: 68 PPPQPPPPQYDYPPQSSFKPKAEAPSSSSSSSSSSSSSSSSSSSSSQA 115
>gb|AAX81992.1| unknown [Homo sapiens] gi|7022415|dbj|BAA91590.1| unnamed protein
product [Homo sapiens]
Length = 639
Score = 32.3 bits (72), Expect = 3.1
Identities = 14/32 (43%), Positives = 18/32 (55%), Gaps = 7/32 (21%)
Query: 44 PPPPPPPPSCVFPTFTGVVKVMENQNNTSSFS 75
PPPPPPPP + P + G +N SS+S
Sbjct: 102 PPPPPPPPPALVPGYNGT-------SNLSSYS 126
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.309 0.126 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,483,570
Number of Sequences: 2540612
Number of extensions: 4803135
Number of successful extensions: 100366
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 99085
Number of HSP's gapped (non-prelim): 598
length of query: 91
length of database: 863,360,394
effective HSP length: 67
effective length of query: 24
effective length of database: 693,139,390
effective search space: 16635345360
effective search space used: 16635345360
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC149600.2