BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149582.6 + phase: 0
(377 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565401.1| F-box family protein [Arabidopsis thaliana] 148 3e-34
gb|AAO37162.1| hypothetical protein [Arabidopsis thaliana] 127 4e-28
ref|NP_176753.1| F-box family protein [Arabidopsis thaliana] gi|... 127 4e-28
gb|AAT69212.1| hypothetical protein At2g17036 [Arabidopsis thali... 127 6e-28
ref|NP_565403.1| F-box family protein [Arabidopsis thaliana] 127 6e-28
ref|NP_175073.1| F-box protein-related / C-type lectin-related [... 121 4e-26
ref|NP_176752.1| F-box family protein [Arabidopsis thaliana] 110 9e-23
ref|NP_176751.1| F-box family protein [Arabidopsis thaliana] 109 2e-22
gb|AAF23839.1| F1E22.11 [Arabidopsis thaliana] 109 2e-22
gb|AAF18598.1| hypothetical protein [Arabidopsis thaliana] gi|25... 108 3e-22
pir||C84555 hypothetical protein At2g17690 [imported] - Arabidop... 102 2e-20
emb|CAB81483.1| putative protein [Arabidopsis thaliana] gi|33675... 100 9e-20
gb|AAF79674.1| F9C16.31 [Arabidopsis thaliana] 94 9e-18
gb|AAD38258.1| Hypothetical Protein [Arabidopsis thaliana] gi|25... 94 9e-18
ref|NP_176664.2| F-box family protein [Arabidopsis thaliana] 94 9e-18
dbj|BAA96935.1| unnamed protein product [Arabidopsis thaliana] g... 92 3e-17
pir||A96682 protein F1E22.12 [imported] - Arabidopsis thaliana g... 91 7e-17
gb|AAM15003.1| hypothetical protein [Arabidopsis thaliana] gi|74... 88 5e-16
ref|NP_176097.1| hypothetical protein [Arabidopsis thaliana] gi|... 73 1e-11
gb|AAO23598.1| At2g24250/F27D4.16 [Arabidopsis thaliana] gi|2019... 72 2e-11
>ref|NP_565401.1| F-box family protein [Arabidopsis thaliana]
Length = 407
Score = 148 bits (373), Expect = 3e-34
Identities = 120/372 (32%), Positives = 180/372 (48%), Gaps = 46/372 (12%)
Query: 5 VDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHP----NSPSFPLQIPHTI 60
VDWS LPK+L I K L++ D+++FRSVC S+RS+ P P + P P
Sbjct: 2 VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPILPDNGGSLF 61
Query: 61 FDSL--YYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLK-SLLSPIS 117
DS + L Q +I LI+P P S + GWLIKVEE N P K +LL P+
Sbjct: 62 PDSAVGFRLSQRSILLIKPHE--------PCIESDSFGWLIKVEEDLNVPRKVTLLDPLC 113
Query: 118 DCKLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYVSKVV--FYPNSPRINV 175
D + S P + P + ++ ++V EL + + L+ + V +V Y +
Sbjct: 114 DTRNSIP----ENFPRVLDMSKFKVRELGREF----KLHYFNTVGDIVESLYLEKAVVKY 165
Query: 176 GDC------VACCIFQEGKLGFMKYGDTKWKLVDENNFFYDDVIVFKGLFYVTDRWGTIS 229
DC V I GKL + D W ++++ YDDV++F G F+ D G
Sbjct: 166 LDCDGDYKFVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTV 225
Query: 230 WIDISSLRLIQFAPPLCGFGNKKHLVESCGNLYVVDRY-----YEGENMRSNNVGRH--- 281
+D SSL+L A P+ G G+KK L+ESCG + +VD Y EG+ + H
Sbjct: 226 VVDYSSLKLTLVASPVFG-GDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEHPAF 284
Query: 282 HDQDAVVECFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELIGY-QGNCIYFK 340
+ + V+ FKV+ E WVDV +L D+ L FS SA +++ G+ ++
Sbjct: 285 YMNERTVK-FKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSVF-- 341
Query: 341 DTFNARMYNLDD 352
FN ++N +D
Sbjct: 342 --FNGNVFNGED 351
>gb|AAO37162.1| hypothetical protein [Arabidopsis thaliana]
Length = 404
Score = 127 bits (320), Expect = 4e-28
Identities = 101/349 (28%), Positives = 163/349 (45%), Gaps = 46/349 (13%)
Query: 5 VDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSH----PNSPSFPLQIPHTI 60
+DW+ LPK+L I K L++ D+++FRSVC S+RS+ P N P FP +
Sbjct: 2 MDWATLPKDLLDXISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHNLPFFPSDDKPFL 61
Query: 61 FDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLK-SLLSPISDC 119
+ + + +I LI+P P + GW++KV ++ K +LL P+S
Sbjct: 62 SNVILRVAHQSILLIKPNE--------PQCEADLFGWIVKVWDNIYVSRKMTLLKPLSSS 113
Query: 120 KLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYV-------------SKVVF 166
+ +P P I+++ + V ELC+ + LY P Y VV
Sbjct: 114 RNYFP----QHLPRIFDMSKFTVRELCR----EVKLYHPDYYCVPGHTALELELGKTVVK 165
Query: 167 YPNSPRINVGDCVACCIFQEGKLGFMKYGDTKWKLVDENNFF---YDDVIVFKGLFYVTD 223
Y N + V I + GKL + D +W ++ N++ D+I+F G F+ D
Sbjct: 166 YLNDDKF-----VLLTILEYGKLAVFRSWDREWTVI--NDYIPSRCQDLIMFDGRFFAID 218
Query: 224 RWGTISWIDISSLRLIQFAPPLCGFGNKKHLVESCGNLYVVDRYY--EGENMRSNNVGRH 281
G +D SS +L A PL G G+KK L+ESCG +++VD + + + +
Sbjct: 219 YNGRTVVVDYSSFKLTLAANPLIGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGGFYSY 278
Query: 282 HDQDAVVECFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELI 330
++ V FK L E +WV+V++L D+ F L FS S ++I
Sbjct: 279 FNETTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADII 327
>ref|NP_176753.1| F-box family protein [Arabidopsis thaliana]
gi|6686404|gb|AAF23838.1| F1E22.13 [Arabidopsis
thaliana]
Length = 360
Score = 127 bits (320), Expect = 4e-28
Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 23/351 (6%)
Query: 6 DWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHPNSP--SFPLQIPHTIFDS 63
DWS LP +L + I L ++I++ RFRS+C S+RSS+P + +P + PL + + +
Sbjct: 3 DWSTLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNPNK 62
Query: 64 LYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPISDCKLSY 123
H+ + S F L+ S ++GWLIK + ++ LL P+S
Sbjct: 63 PLTDHRRRGEFLS----RSAFFRVTLSSSPSQGWLIKSDVDVSSGKLHLLDPLS----RL 114
Query: 124 PLDSNNSSPIIWNLLNYRVIELCKSYTFQ--KTLYSPSYVSKVVFYPNSPRINVGDCVAC 181
P++ + +L + + E+ ++Y +T + K V GD
Sbjct: 115 PMEHSRKRV---DLSEFTITEIREAYQVHDWRTRKETRPIFKRVALVKDKE---GDNQVL 168
Query: 182 CIFQEGKLGFMKYGDTKWKLVDENNFFYDDVIVFKGLFYVTDRWGTISWIDISSLRLIQF 241
I GK M Y D K E + + D+IV KG Y D G + WI S L+ I+F
Sbjct: 169 GIRSTGK---MMYWDIKTWKAKEEGYEFSDIIVHKGQTYALDSIGIVYWIR-SDLKFIRF 224
Query: 242 APPLCGFGNKKHLVESCGNLYVVDRYYEGENMRSNNVGRHHDQDAVVECFKVHMLDEEWG 301
P + + + LVE CG Y+V+R GE+ + A FKV+ D+E G
Sbjct: 225 GPLVGDWTGDRRLVECCGEFYIVERLV-GESTWKRKADDTGYEYAKTVGFKVYKFDDEQG 283
Query: 302 KWVDVKNLRDRAFVLSRSCNFSVSAKELIGYQGNCIYFKDTFNARMYNLDD 352
K ++VK+L D+AFV++ FSV A E G N IYF D +++ LD+
Sbjct: 284 KMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFTDDTMIKVFKLDN 334
>gb|AAT69212.1| hypothetical protein At2g17036 [Arabidopsis thaliana]
Length = 404
Score = 127 bits (319), Expect = 6e-28
Identities = 101/349 (28%), Positives = 163/349 (45%), Gaps = 46/349 (13%)
Query: 5 VDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSH----PNSPSFPLQIPHTI 60
+DW+ LPK+L I K L++ D+++FRSVC S+RS+ P N P FP +
Sbjct: 2 MDWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHNLPFFPSDDKPFL 61
Query: 61 FDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLK-SLLSPISDC 119
+ + + +I LI+P P + GW++KV ++ K +LL P+S
Sbjct: 62 SNVILRVAHQSILLIKPNE--------PQCEADLFGWIVKVWDNIYVSRKMTLLKPLSSS 113
Query: 120 KLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYV-------------SKVVF 166
+ +P P I+++ + V ELC+ + LY P Y VV
Sbjct: 114 RNYFP----QHLPRIFDMSKFTVRELCR----EVKLYHPDYYCVPGHTALELELGKTVVK 165
Query: 167 YPNSPRINVGDCVACCIFQEGKLGFMKYGDTKWKLVDENNFF---YDDVIVFKGLFYVTD 223
Y N + V I + GKL + D +W ++ N++ D+I+F G F+ D
Sbjct: 166 YLNDDKF-----VLLTILEYGKLAVFRSWDREWTVI--NDYIPSRCQDLIMFDGRFFAID 218
Query: 224 RWGTISWIDISSLRLIQFAPPLCGFGNKKHLVESCGNLYVVDRYY--EGENMRSNNVGRH 281
G +D SS +L A PL G G+KK L+ESCG +++VD + + + +
Sbjct: 219 YNGRTVVVDYSSFKLTLAANPLIGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGGFYSY 278
Query: 282 HDQDAVVECFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELI 330
++ V FK L E +WV+V++L D+ F L FS S ++I
Sbjct: 279 FNETTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADII 327
>ref|NP_565403.1| F-box family protein [Arabidopsis thaliana]
Length = 428
Score = 127 bits (319), Expect = 6e-28
Identities = 101/349 (28%), Positives = 163/349 (45%), Gaps = 46/349 (13%)
Query: 5 VDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSH----PNSPSFPLQIPHTI 60
+DW+ LPK+L I K L++ D+++FRSVC S+RS+ P N P FP +
Sbjct: 1 MDWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHNLPFFPSDDKPFL 60
Query: 61 FDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLK-SLLSPISDC 119
+ + + +I LI+P P + GW++KV ++ K +LL P+S
Sbjct: 61 SNVILRVAHQSILLIKPNE--------PQCEADLFGWIVKVWDNIYVSRKMTLLKPLSSS 112
Query: 120 KLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYV-------------SKVVF 166
+ +P P I+++ + V ELC+ + LY P Y VV
Sbjct: 113 RNYFP----QHLPRIFDMSKFTVRELCR----EVKLYHPDYYCVPGHTALELELGKTVVK 164
Query: 167 YPNSPRINVGDCVACCIFQEGKLGFMKYGDTKWKLVDENNFF---YDDVIVFKGLFYVTD 223
Y N + V I + GKL + D +W ++ N++ D+I+F G F+ D
Sbjct: 165 YLNDDKF-----VLLTILEYGKLAVFRSWDREWTVI--NDYIPSRCQDLIMFDGRFFAID 217
Query: 224 RWGTISWIDISSLRLIQFAPPLCGFGNKKHLVESCGNLYVVDRYY--EGENMRSNNVGRH 281
G +D SS +L A PL G G+KK L+ESCG +++VD + + + +
Sbjct: 218 YNGRTVVVDYSSFKLTLAANPLIGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGGFYSY 277
Query: 282 HDQDAVVECFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELI 330
++ V FK L E +WV+V++L D+ F L FS S ++I
Sbjct: 278 FNETTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADII 326
>ref|NP_175073.1| F-box protein-related / C-type lectin-related [Arabidopsis
thaliana] gi|12320820|gb|AAG50551.1| hypothetical
protein [Arabidopsis thaliana] gi|25405156|pir||H96504
hypothetical protein T7O23.22 [imported] - Arabidopsis
thaliana
Length = 347
Score = 121 bits (303), Expect = 4e-26
Identities = 102/363 (28%), Positives = 170/363 (46%), Gaps = 50/363 (13%)
Query: 4 KVDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHPNSPSFPLQIPHTIFDS 63
KV WS L ++L + L ++I++LRFRS+C+ +RS++ F +P
Sbjct: 3 KVGWSDLHEDLIDLLANNLSSNINLLRFRSICKPWRSTVATKKRLHNHFERNLPT----- 57
Query: 64 LYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPISDCKLSY 123
+ + T+ + S+ F + +P KGWLIK + + + +LLSP+S K
Sbjct: 58 --FKKKKTV-----VSPSTFFRVTLPSPCRNKGWLIKNRQVSESSKNNLLSPLSG-KTIT 109
Query: 124 PLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYVSKVVFYPNSPRINVGDCVACCI 183
P D + ++L K F+ + S + + +S R+ D V +
Sbjct: 110 PSD--------------KTLDLLKVECFRDS-------SILQLFADSDRVVFLDNVFFVV 148
Query: 184 FQEGKLGFMKYGDTK--W-KLVDENNFFYDDVIVFKGLFYVTDRWGTISWIDISSLRLIQ 240
+ ++ K G+ W ++ +E + D+I+ KG Y D G I WI +S L + Q
Sbjct: 149 DFKNEIWCCKSGEETRHWTRINNEEAKGFLDIILHKGKIYALDLTGAIWWISLSELSIYQ 208
Query: 241 FAP--PLCGFG----NKKHLVESCGNLYVVDRYYEGENMRSNNVGRHHDQDAVVECFKVH 294
+ P P+ + +K LVE CG L VV R+Y+ ++ R CFKV+
Sbjct: 209 YGPSTPVDFYEIDNCKEKRLVEYCGELCVVHRFYKKFCVKRVLTER-------TVCFKVY 261
Query: 295 MLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELIGYQGNCIYFKDTFNARMYNLDDNI 354
+D+ +WV+V +L D+A +++ F V A E G N IYF D + ++ LDD
Sbjct: 262 KMDKNLVEWVEVSSLGDKALIVATDNCFLVLASEYYGCLENAIYFNDREDVSVFKLDDCS 321
Query: 355 IIT 357
IIT
Sbjct: 322 IIT 324
>ref|NP_176752.1| F-box family protein [Arabidopsis thaliana]
Length = 362
Score = 110 bits (274), Expect = 9e-23
Identities = 109/373 (29%), Positives = 167/373 (44%), Gaps = 51/373 (13%)
Query: 6 DWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHPNSPSFPLQIPHTIFDSL- 64
DWS+LP+EL I L + +++ RFRS+C S+RSS + N+P FP + P FD +
Sbjct: 5 DWSNLPEELLHMIVLLLFSVVELKRFRSICRSWRSSTSGVNRNNP-FPSR-PRIHFDPID 62
Query: 65 --YYLHQSTIYLIEPTNGSSN--FNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPISDCK 120
L Y+ P S F L+ S +KGW+IK + N+ LL+ +S
Sbjct: 63 PSETLSSDDSYISRPGAFLSRAAFFRVTLSSSSSKGWMIKSDMDINSGRFRLLNVLS--- 119
Query: 121 LSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYVSKVVFYPNSPRINVGDCVA 180
YPL + S +LL + V E+ ++YT T S Y S + V +
Sbjct: 120 -RYPLRLYSESI---DLLEFTVSEIREAYTVLNTAKRRSATKG---YQRSAPVKVKEGEG 172
Query: 181 CCIFQEGKLGFMKYGDTKW------KLVDENNFFYDDVIVFKGLFYVTDRWGTISWIDIS 234
++G LG + G+ + + + + D+IV KGL S
Sbjct: 173 ---HRDGVLGIGRDGNINYWDGNVLSELKQMGDHFSDIIVHKGLIN-------------S 216
Query: 235 SLRLIQFAPPLC-----GFGNKKHLVESCGNLYVVDRYYEGENMRSNNVGRHHDQDAVVE 289
L + +F L G VE CG LY+V+R +N R G V
Sbjct: 217 DLEISRFGTSLDENITDGCWGDLRFVEGCGELYIVERL--PKNTRKRKAGDFFHNSRTVG 274
Query: 290 CFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELIGYQGNCIYFKDTFNARMYN 349
FK + +DEE KW+++K L D AF++ FSV A E+ G N IY+ + ++
Sbjct: 275 -FKAYKMDEELAKWIEIKTLGDNAFLMGTDTCFSVLAHEVYGCLPNSIYYTENTWPKVCK 333
Query: 350 LDD----NIIITI 358
L+D +II+T+
Sbjct: 334 LEDGNGSSIIVTM 346
>ref|NP_176751.1| F-box family protein [Arabidopsis thaliana]
Length = 371
Score = 109 bits (272), Expect = 2e-22
Identities = 106/370 (28%), Positives = 168/370 (44%), Gaps = 47/370 (12%)
Query: 5 VDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIP-----PSH--PNSPSFPLQIP 57
VDWS LP+EL I + ++ RF S+C S+ SS+ P H P P+
Sbjct: 2 VDWSTLPEELLHFIAARSFSLVEYKRFSSICVSWHSSVSGVKKNPFHRRPLIDFNPIAPS 61
Query: 58 HTIFDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPIS 117
T+ + + +L + F L+ S +KGW+IK + N+ LL+P+S
Sbjct: 62 ETLLEDHVFSCNPGAFL-----SRAAFFRVTLSSSPSKGWIIKSDMDTNSGRFHLLNPLS 116
Query: 118 DCKLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKT----LYSPSYVSKVVFYPNSPRI 173
+PL ++ S +LL++ V E+ +SY K L +P Y + ++
Sbjct: 117 ----RFPLRISSES---LDLLDFTVSEIQESYAVLKDAKGRLPNPGYQRSALV-----KV 164
Query: 174 NVGDCVACCIFQEGKLGFMKYGDTKWKLVDENNF-----FYDDVIVFKGLFYVTDRWGTI 228
GD I G+ G + Y W N F + D+IV KG+ YV D G +
Sbjct: 165 KEGDDHHHGILGIGRDGTINY----WNGNVLNGFKQMGHHFSDIIVHKGVTYVLDSKGIV 220
Query: 229 SWIDISSLRLIQFAPPL---CGFGNKKH---LVESCGNLYVVDRYYEGENMRSNNVGRHH 282
W S L + ++ L G +++ V+ CG LYV+ R + + + +
Sbjct: 221 -WCINSDLEMSRYETSLDENMTNGCRRYYMRFVDCCGELYVIKRLPKENSRKRKSTLFQF 279
Query: 283 DQDAVVECFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELIGYQGNCIYFKDT 342
+ A FKV+ +D+E KWV+VK L D AFV++ FSV A E G N IYF +
Sbjct: 280 SRTAG---FKVYKIDKELAKWVEVKTLGDNAFVMATDTCFSVLAHEYYGCLPNSIYFIED 336
Query: 343 FNARMYNLDD 352
+++ LD+
Sbjct: 337 LEPKVFQLDN 346
>gb|AAF23839.1| F1E22.11 [Arabidopsis thaliana]
Length = 526
Score = 109 bits (272), Expect = 2e-22
Identities = 106/370 (28%), Positives = 168/370 (44%), Gaps = 47/370 (12%)
Query: 5 VDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIP-----PSH--PNSPSFPLQIP 57
VDWS LP+EL I + ++ RF S+C S+ SS+ P H P P+
Sbjct: 2 VDWSTLPEELLHFIAARSFSLVEYKRFSSICVSWHSSVSGVKKNPFHRRPLIDFNPIAPS 61
Query: 58 HTIFDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPIS 117
T+ + + +L + F L+ S +KGW+IK + N+ LL+P+S
Sbjct: 62 ETLLEDHVFSCNPGAFL-----SRAAFFRVTLSSSPSKGWIIKSDMDTNSGRFHLLNPLS 116
Query: 118 DCKLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKT----LYSPSYVSKVVFYPNSPRI 173
+PL ++ S +LL++ V E+ +SY K L +P Y + ++
Sbjct: 117 ----RFPLRISSES---LDLLDFTVSEIQESYAVLKDAKGRLPNPGYQRSALV-----KV 164
Query: 174 NVGDCVACCIFQEGKLGFMKYGDTKWKLVDENNF-----FYDDVIVFKGLFYVTDRWGTI 228
GD I G+ G + Y W N F + D+IV KG+ YV D G +
Sbjct: 165 KEGDDHHHGILGIGRDGTINY----WNGNVLNGFKQMGHHFSDIIVHKGVTYVLDSKGIV 220
Query: 229 SWIDISSLRLIQFAPPL---CGFGNKKH---LVESCGNLYVVDRYYEGENMRSNNVGRHH 282
W S L + ++ L G +++ V+ CG LYV+ R + + + +
Sbjct: 221 -WCINSDLEMSRYETSLDENMTNGCRRYYMRFVDCCGELYVIKRLPKENSRKRKSTLFQF 279
Query: 283 DQDAVVECFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELIGYQGNCIYFKDT 342
+ A FKV+ +D+E KWV+VK L D AFV++ FSV A E G N IYF +
Sbjct: 280 SRTAG---FKVYKIDKELAKWVEVKTLGDNAFVMATDTCFSVLAHEYYGCLPNSIYFIED 336
Query: 343 FNARMYNLDD 352
+++ LD+
Sbjct: 337 LEPKVFQLDN 346
>gb|AAF18598.1| hypothetical protein [Arabidopsis thaliana] gi|25411773|pir||C84547
hypothetical protein At2g17030 [imported] - Arabidopsis
thaliana
Length = 1169
Score = 108 bits (270), Expect = 3e-22
Identities = 87/267 (32%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 5 VDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHP----NSPSFPLQIPHTI 60
VDWS LPK+L I K L++ D+++FRSVC S+RS+ P P + P P
Sbjct: 2 VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPILPDNGGSLF 61
Query: 61 FDSL--YYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLK-SLLSPIS 117
DS + L Q +I LI+P P S + GWLIKVEE N P K +LL P+
Sbjct: 62 PDSAVGFRLSQRSILLIKPHE--------PCIESDSFGWLIKVEEDLNVPRKVTLLDPLC 113
Query: 118 DCKLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYVSKVV--FYPNSPRINV 175
D + S P + P + ++ ++V EL + + L+ + V +V Y +
Sbjct: 114 DTRNSIP----ENFPRVLDMSKFKVRELGREF----KLHYFNTVGDIVESLYLEKAVVKY 165
Query: 176 GDC------VACCIFQEGKLGFMKYGDTKWKLVDENNFFYDDVIVFKGLFYVTDRWGTIS 229
DC V I GKL + D W ++++ YDDV++F G F+ D G
Sbjct: 166 LDCDGDYKFVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTV 225
Query: 230 WIDISSLRLIQFAPPLCGFGNKKHLVE 256
+D SSL+L A P+ FG K++++
Sbjct: 226 VVDYSSLKLTLVASPV--FGGDKNVLK 250
Score = 104 bits (260), Expect = 4e-21
Identities = 91/323 (28%), Positives = 145/323 (44%), Gaps = 46/323 (14%)
Query: 31 FRSVCESFRSSIPPSH----PNSPSFPLQIPHTIFDSLYYLHQSTIYLIEPTNGSSNFNL 86
FRSVC S+RS+ P N P FP + + + + +I LI+P
Sbjct: 768 FRSVCSSWRSAAGPKRLLWAHNLPFFPSDDKPFLSNVILRVAHQSILLIKPNE------- 820
Query: 87 PPLAPSYTKGWLIKVEESNNNPLK-SLLSPISDCKLSYPLDSNNSSPIIWNLLNYRVIEL 145
P + GW++KV ++ K +LL P+S + +P P I+++ + V EL
Sbjct: 821 -PQCEADLFGWIVKVWDNIYVSRKMTLLKPLSSSRNYFP----QHLPRIFDMSKFTVREL 875
Query: 146 CKSYTFQKTLYSPSYV-------------SKVVFYPNSPRINVGDCVACCIFQEGKLGFM 192
C+ + LY P Y VV Y N + V I + GKL
Sbjct: 876 CR----EVKLYHPDYYCVPGHTALELELGKTVVKYLNDDKF-----VLLTILEYGKLAVF 926
Query: 193 KYGDTKWKLVDENNFF---YDDVIVFKGLFYVTDRWGTISWIDISSLRLIQFAPPLCGFG 249
+ D +W ++ N++ D+I+F G F+ D G +D SS +L A PL G G
Sbjct: 927 RSWDREWTVI--NDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYSSFKLTLAANPLIGGG 984
Query: 250 NKKHLVESCGNLYVVDRYY--EGENMRSNNVGRHHDQDAVVECFKVHMLDEEWGKWVDVK 307
+KK L+ESCG +++VD + + + + ++ V FK L E +WV+V+
Sbjct: 985 DKKFLIESCGEMFLVDIEFCLNEKPEFTGGFYSYFNETTVSYKFKFFKLVEREKRWVEVE 1044
Query: 308 NLRDRAFVLSRSCNFSVSAKELI 330
+L D+ F L FS S ++I
Sbjct: 1045 DLGDKMFFLGDDSTFSASTADII 1067
>pir||C84555 hypothetical protein At2g17690 [imported] - Arabidopsis thaliana
gi|15227882|ref|NP_179360.1| F-box family protein
[Arabidopsis thaliana]
Length = 421
Score = 102 bits (254), Expect = 2e-20
Identities = 117/427 (27%), Positives = 171/427 (39%), Gaps = 98/427 (22%)
Query: 6 DWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHPNSPSFPLQIPHTIFDSLY 65
DWS LP+EL I L + I+++RFRS+C+S+RSS + N H++ L
Sbjct: 3 DWSKLPEELLGLIALRLYSVIELIRFRSICKSWRSSASGVNKN---------HSLSSPLI 53
Query: 66 YLHQSTIYLIE-PTNGS------------SNFNLPPLAPSYTKGWLIKVEESNNNPLKSL 112
Y I L NG + F LA S +GWLIK + L
Sbjct: 54 YFKPLQIILARAQANGQILSKYHGTVLSRATFFRVTLASSPDQGWLIKSDTDLKYRNFHL 113
Query: 113 LSPISDCKLSYPLDSNNSSPIIWNLLNYRVIELCKSYTF--QKTLYSPSYVSKVVFYPNS 170
L+ +S L S + +L + V E+ +SY ++T + S +V
Sbjct: 114 LNCLSRKAL-------GRSRKLISLSEFIVSEIQESYAVVGRRTRETASEFKRVFLV--- 163
Query: 171 PRINVGDCVACCIFQEGKLGFMKYGDTKWKLVDENNFFYDDVIVFKGLFYVTDRWGTISW 230
R+ GD I +GK+ F K G W + + + D ++ +GL Y D G + W
Sbjct: 164 -RVQGGDHRVLVIGIDGKIRFWKGG--IWNGIKKQVAQFSDFVLDEGLTYAVDTKGIMWW 220
Query: 231 IDISSLRLIQFAPPL-----CGFGNKKHLVESCGNLYVVDRYYEGENMRSNNVGRH---- 281
I S+ +I++ L G +K V G LY+VDR + EN+ +
Sbjct: 221 IS-SAYDIIRYGTKLHENITNGSCGEKRFVRCRGELYIVDRLID-ENLLKRKADSYDDNA 278
Query: 282 ------------------------------------HDQDAVVEC------------FKV 293
HD V C FKV
Sbjct: 279 IVHFRNADYTNADLWEDGNGNDDFFAAQAHRFIHVLHDNLGNVSCKPFERDPPKTIGFKV 338
Query: 294 HMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELIGYQGNCIYFKD--TFNARMYNLD 351
+ DEE KWV+VK+L D+A V++ FSVSA E G N IYF D +++ LD
Sbjct: 339 YKNDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCLPNSIYFTDKKEEEVKVFKLD 398
Query: 352 DNIIITI 358
D I T+
Sbjct: 399 DGSITTM 405
>emb|CAB81483.1| putative protein [Arabidopsis thaliana] gi|3367592|emb|CAA20044.1|
putative protein [Arabidopsis thaliana]
gi|7486652|pir||T04679 hypothetical protein F8D20.250 -
Arabidopsis thaliana
Length = 926
Score = 100 bits (248), Expect = 9e-20
Identities = 89/316 (28%), Positives = 142/316 (44%), Gaps = 46/316 (14%)
Query: 1 MDEKVDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHPNSPSFPLQIPHTI 60
M E WS LP EL I L + +++LRFRS+C++FRS++
Sbjct: 1 MSEATVWSDLPGELLDHIANGLFSKVELLRFRSICKTFRSAVDSDK-------------- 46
Query: 61 FDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPISDCK 120
+ L +L ++ L+ P S+ F L+ KGWLIK++++ + K LLSP+S
Sbjct: 47 -NFLDHLKRNRRRLLSPY--STAFYRVVLSSYPDKGWLIKLQDAYVSSQKQLLSPLSRFS 103
Query: 121 LSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYVSKVVFYPNSPRINVGDCVA 180
+ SS +LL + V E+ +SY + Y+ + S N R+ + +
Sbjct: 104 I-------KSSGKTLDLLEFTVSEIHQSYDVEYLYYNSTRASF-----NFARVVLAEDFV 151
Query: 181 CCIFQEGKLGF--MKYGDTKW-KLVDENNFFYDDVIVFKGLFYVTDRWGTISWIDISSLR 237
+ K+ D+ W +++DE + D++ KG Y D G + WI +S
Sbjct: 152 FIVDNYKKIWLCNSNESDSHWVRIMDEEVKLFSDIVFHKGYMYALDLTGAVWWISLSEFG 211
Query: 238 LIQFAP-----PLCGFG--NKKHLVESCGNLYVVDRYYEGENMRSNNVGRHHDQDAVVEC 290
+ QF P C K VE CG+L +V R+ R V D D V
Sbjct: 212 IFQFGPSSTPMDYCDIDECKDKRFVEYCGDLCIVHRF--SRKFRIKRV----DIDMTVG- 264
Query: 291 FKVHMLDEEWGKWVDV 306
FKV+ +DEE ++V+V
Sbjct: 265 FKVYKMDEELVEYVEV 280
>gb|AAF79674.1| F9C16.31 [Arabidopsis thaliana]
Length = 311
Score = 93.6 bits (231), Expect = 9e-18
Identities = 92/361 (25%), Positives = 153/361 (41%), Gaps = 82/361 (22%)
Query: 4 KVDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHPNSPSFPLQIPHTIFDS 63
KV WS L ++L + L ++I++LRFRS+C+ +RS
Sbjct: 3 KVGWSDLHEDLIDLLANNLSSNINLLRFRSICKPWRS----------------------- 39
Query: 64 LYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPISDCKLSY 123
T+ + + NLP K+++SP + +++
Sbjct: 40 -------TVATKKRLHNHFERNLPTFKKK-----------------KTVVSPSTFFRVTL 75
Query: 124 PLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYVSKVVFYPNSPRI-NVGDCVACC 182
P N W + N +V E ++++ S +VVF N + + + + CC
Sbjct: 76 PSPCRNKG---WLIKNRQVSE---------SIFADS--DRVVFLDNVFFVVDFKNEIWCC 121
Query: 183 IFQEGKLGFMKYGDTKWKLVDENNFFYDDVIVFKGLFYVTDRWGTISWIDISSLRLIQFA 242
E + + + + K + D+I+ KG Y D G I WI +S L + Q+
Sbjct: 122 KSGEETRHWTRINNEEAK-------GFLDIILHKGKIYALDLTGAIWWISLSELSIYQYG 174
Query: 243 P--PLCGFG----NKKHLVESCGNLYVVDRYYEGENMRSNNVGRHHDQDAVVECFKVHML 296
P P+ + +K LVE CG L VV R+Y+ ++ R CFKV+ +
Sbjct: 175 PSTPVDFYEIDNCKEKRLVEYCGELCVVHRFYKKFCVKRVLTER-------TVCFKVYKM 227
Query: 297 DEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELIGYQGNCIYFKDTFNARMYNLDDNIII 356
D+ +WV+V +L D+A +++ F V A E G N IYF D + ++ LDD II
Sbjct: 228 DKNLVEWVEVSSLGDKALIVATDNCFLVLASEYYGCLENAIYFNDREDVSVFKLDDCSII 287
Query: 357 T 357
T
Sbjct: 288 T 288
>gb|AAD38258.1| Hypothetical Protein [Arabidopsis thaliana] gi|25404500|pir||F96671
hypothetical protein F13O11.14 [imported] - Arabidopsis
thaliana
Length = 383
Score = 93.6 bits (231), Expect = 9e-18
Identities = 96/347 (27%), Positives = 153/347 (43%), Gaps = 38/347 (10%)
Query: 6 DWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIP-PSHPNSPSFPL----QIPHTI 60
+WS LP+EL + I K LDN D++ RS+C S+RS+ P PS ++ S+ L + P +
Sbjct: 3 NWSQLPEELLNLISKNLDNCFDVVHARSICRSWRSAFPFPSSLSTLSYSLPTFAKFP-LV 61
Query: 61 FDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPIS-DC 119
L L + I+L N +++ P Y G +++ +N L SP+
Sbjct: 62 SKDLCTLKKIQIFLFRARNPAADI------PEYFLG---GIDQDQSNDHMELPSPLQCSV 112
Query: 120 KLSYPLDSNNSSPIIWNLLNYRVIELCKSYT---FQKTLYSPSYVSKVVFYPNSPRINVG 176
K+ +P S P + N+L+Y++I L Y + + YV V F P + N G
Sbjct: 113 KVKFP----QSDPFLVNMLDYQIIPLGFQYIMIGWDPESLANGYVG-VAFLP--VKKNGG 165
Query: 177 DCVACCIFQEGKLGFMKYGDTKWKLVDENNF-FYDDVIVFKGLFYVTDRWGTISWIDISS 235
D + L ++ + +W V + + ++ F+G FYVT G I D S
Sbjct: 166 DEFVVLLRYRNHLLVLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDPYS 225
Query: 236 LRLIQFAPPLCGFGNKKHLVESCGNLYVVDRYYEGENMRSNNVGRHHDQDAVVECFKVHM 295
L P +K + L++V+++ ++ R +V
Sbjct: 226 LEQTLLMPSEPLRSSKYLIPNGSDELFLVEKFNPFPEADVLDLSRF--------ACRVSR 277
Query: 296 LDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKEL---IGYQGNCIYF 339
LDEE G+WV+V +L DR + N SAKEL G GN I F
Sbjct: 278 LDEEAGQWVEVIDLGDRVLFIGHFGNVCCSAKELPDGCGVSGNSILF 324
>ref|NP_176664.2| F-box family protein [Arabidopsis thaliana]
Length = 384
Score = 93.6 bits (231), Expect = 9e-18
Identities = 96/347 (27%), Positives = 153/347 (43%), Gaps = 38/347 (10%)
Query: 6 DWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIP-PSHPNSPSFPL----QIPHTI 60
+WS LP+EL + I K LDN D++ RS+C S+RS+ P PS ++ S+ L + P +
Sbjct: 4 NWSQLPEELLNLISKNLDNCFDVVHARSICRSWRSAFPFPSSLSTLSYSLPTFAKFP-LV 62
Query: 61 FDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPIS-DC 119
L L + I+L N +++ P Y G +++ +N L SP+
Sbjct: 63 SKDLCTLKKIQIFLFRARNPAADI------PEYFLG---GIDQDQSNDHMELPSPLQCSV 113
Query: 120 KLSYPLDSNNSSPIIWNLLNYRVIELCKSYT---FQKTLYSPSYVSKVVFYPNSPRINVG 176
K+ +P S P + N+L+Y++I L Y + + YV V F P + N G
Sbjct: 114 KVKFP----QSDPFLVNMLDYQIIPLGFQYIMIGWDPESLANGYVG-VAFLP--VKKNGG 166
Query: 177 DCVACCIFQEGKLGFMKYGDTKWKLVDENNF-FYDDVIVFKGLFYVTDRWGTISWIDISS 235
D + L ++ + +W V + + ++ F+G FYVT G I D S
Sbjct: 167 DEFVVLLRYRNHLLVLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDPYS 226
Query: 236 LRLIQFAPPLCGFGNKKHLVESCGNLYVVDRYYEGENMRSNNVGRHHDQDAVVECFKVHM 295
L P +K + L++V+++ ++ R +V
Sbjct: 227 LEQTLLMPSEPLRSSKYLIPNGSDELFLVEKFNPFPEADVLDLSRF--------ACRVSR 278
Query: 296 LDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKEL---IGYQGNCIYF 339
LDEE G+WV+V +L DR + N SAKEL G GN I F
Sbjct: 279 LDEEAGQWVEVIDLGDRVLFIGHFGNVCCSAKELPDGCGVSGNSILF 325
>dbj|BAA96935.1| unnamed protein product [Arabidopsis thaliana]
gi|15238601|ref|NP_200814.1| F-box family protein
[Arabidopsis thaliana]
Length = 374
Score = 91.7 bits (226), Expect = 3e-17
Identities = 104/364 (28%), Positives = 173/364 (46%), Gaps = 60/364 (16%)
Query: 7 WSHLPKELWSKIGKYLDNH----IDILRFRSVCESFRSSIPPSHPNS--PSFPLQIPHTI 60
WS LP ++ I LD+ I +L RSVC ++R S+P S+ N+ FP +P
Sbjct: 11 WSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLSKFPKYLPFWS 70
Query: 61 FDS----LYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPI 116
S + L QS +Y +E AP + L+K++E+ ++ +L
Sbjct: 71 SSSSSSGFFTLKQSNVYKLE-------------APLNPRTCLVKLQETTPGIMR-VLDLF 116
Query: 117 SDCKLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKT--------LYSPSYVSKVVFYP 168
S+ ++ + L N S I +L + V + ++Y + + + KVV
Sbjct: 117 SNDRICF-LPENFPSKI--DLQEFHVRLVRRTYRMEYANNGGGAVPCFWSLHSDKVVILS 173
Query: 169 NSPRINVGDCVACCIFQEGKLGFMKYG-DTKWKLVDEN-NFFYDDVIVFKG--LFYVTDR 224
+ D I GKLGF+K G D KWK++D + N Y+D++++K V D+
Sbjct: 174 SGE-----DSAIIAIHSGGKLGFLKSGNDEKWKILDNSWNVIYEDIMLYKDNRCIVVDDK 228
Query: 225 WGTISWIDISSLRLIQFAPPLCGFG-NKKHLVE-SCGNLYVVDRYYEGENMRSNNVGRHH 282
T+ + D+ ++ A L G G +KKHLVE S G +++VD+Y + +S+
Sbjct: 229 GKTVIY-DVD-FKVSDLAEGLVGGGGHKKHLVECSGGEVFLVDKYVKTVWCKSDI----- 281
Query: 283 DQDAVVECFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVS--AKELIGYQGNCIYFK 340
+VVE F+V+ L E +W +V++L D A + C+FSV A +L G I++
Sbjct: 282 -SKSVVE-FRVYNLKREEKRWEEVRDLGDVALFIGDDCSFSVQNPAGDL---AGGFIFYS 336
Query: 341 DTFN 344
D N
Sbjct: 337 DYRN 340
>pir||A96682 protein F1E22.12 [imported] - Arabidopsis thaliana
gi|6686397|gb|AAF23831.1| F1E22.12 [Arabidopsis thaliana]
Length = 1055
Score = 90.5 bits (223), Expect = 7e-17
Identities = 90/330 (27%), Positives = 143/330 (43%), Gaps = 39/330 (11%)
Query: 44 PSHPNSPSFPLQIPHTIFDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEE 103
PS P P+ T+ Y+ + +L + F L+ S +KGW+IK +
Sbjct: 734 PSRPRIHFDPIDPSETLSSDDSYISRPGAFL-----SRAAFFRVTLSSSSSKGWMIKSDM 788
Query: 104 SNNNPLKSLLSPISDCKLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYVSK 163
N+ LL+ +S YPL + S +LL + V E+ ++YT T S
Sbjct: 789 DINSGRFRLLNVLS----RYPLRLYSESI---DLLEFTVSEIREAYTVLNTAKRRSATKG 841
Query: 164 VVFYPNSPRINVGDCVACCIFQEGKLGFMKYGDTKW------KLVDENNFFYDDVIVFKG 217
Y S + V + ++G LG + G+ + + + + D+IV KG
Sbjct: 842 ---YQRSAPVKVKEGEG---HRDGVLGIGRDGNINYWDGNVLSELKQMGDHFSDIIVHKG 895
Query: 218 LFYVTDRWGTISWIDISSLRLIQFAPPLC-----GFGNKKHLVESCGNLYVVDRYYEGEN 272
+ YV D G + S L + +F L G VE CG LY+V+R +N
Sbjct: 896 VTYVLDSKGNLI---NSDLEISRFGTSLDENITDGCWGDLRFVEGCGELYIVERL--PKN 950
Query: 273 MRSNNVGRHHDQDAVVECFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELIGY 332
R G V FK + +DEE KW+++K L D AF++ FSV A E+ G
Sbjct: 951 TRKRKAGDFFHNSRTVG-FKAYKMDEELAKWIEIKTLGDNAFLMGTDTCFSVLAHEVYGC 1009
Query: 333 QGNCIYFKDTFNARMYNLDD----NIIITI 358
N IY+ + ++ L+D +II+T+
Sbjct: 1010 LPNSIYYTENTWPKVCKLEDGNGSSIIVTM 1039
>gb|AAM15003.1| hypothetical protein [Arabidopsis thaliana] gi|7487201|pir||T02608
hypothetical protein At2g26160 [imported] - Arabidopsis
thaliana gi|15225256|ref|NP_180185.1| F-box family
protein [Arabidopsis thaliana]
Length = 359
Score = 87.8 bits (216), Expect = 5e-16
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 64/358 (17%)
Query: 3 EKVDWSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHPNSPSFPLQIPHTIFD 62
EK +WS LP +L + + D+LR RS+C+ +RS+ SF +P +
Sbjct: 2 EKPEWSELPGDLINLTANRFSSISDVLRVRSICKPWRSAAA----TPKSFQCNLPSSNKM 57
Query: 63 SLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPISDCKLS 122
L +T + + P + SY KGWLI+ ++ + + +LLSP L+
Sbjct: 58 IETVLSPTTFFRVTG----------PSSCSY-KGWLIRTKQVSESSKINLLSPFFRQLLT 106
Query: 123 YPLDSNNSSPIIWNLLNYRVIELCKSYT---FQKTLYS-------PSYV-SKVVFYPNSP 171
S +LL + V E+ +SY F K L PS++ S+VVF N
Sbjct: 107 -------PSQQTLDLLKFEVSEIRQSYEIHIFDKYLIQGVIGKEGPSHILSRVVFLDN-- 157
Query: 172 RINVGDCVACCIFQEGKLGFMKYGDTK---WKLVDENNFFYDDVIVFKGLFYVTDRWGTI 228
+ + Q+ K+ K G+ W + + D+I+ KG Y D G I
Sbjct: 158 -------LIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGAI 210
Query: 229 SWIDISSLRLIQFAPPL----CGFGN-KKHLVESCGNLYVVDRYYEGENMRSNNVGRHHD 283
WI +S L L+QF P + G+ + K LVE CG+L ++ +R
Sbjct: 211 WWISLSPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCII------HQLRLKKAYIRRS 264
Query: 284 QDAVVECFKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKELIGYQGNCIYFKD 341
Q V FKV+ +DE KWV+ D+ + E G N IYF D
Sbjct: 265 QRTV--GFKVYKMDEYVAKWVESGAEADQFI------KHDDESSEYHGLLKNYIYFDD 314
>ref|NP_176097.1| hypothetical protein [Arabidopsis thaliana]
gi|12321138|gb|AAG50666.1| hypothetical protein
[Arabidopsis thaliana] gi|25404174|pir||B96613
hypothetical protein F13D13.1 [imported] - Arabidopsis
thaliana
Length = 228
Score = 73.2 bits (178), Expect = 1e-11
Identities = 57/176 (32%), Positives = 78/176 (43%), Gaps = 40/176 (22%)
Query: 186 EGKLGFMKYGDTKWKLVDENNFFYDDVIVFKGLFYVTDRWGTISWIDISSLRLIQFAPPL 245
+GK+ F + W + + + D+IV K L YV D G + WI I +++ L
Sbjct: 58 DGKIRF--WNGEIWTRIKDQIGEFSDIIVLKELIYVLDTKGIVWWISI-----VRYGTSL 110
Query: 246 CG-FGNKKHLVESCGNLYVVDRY-------------------YEGENMRSNNVGRHH--- 282
G LV CG LY+VDR Y G R +NV
Sbjct: 111 TNECGGDLSLVACCGELYIVDRLFKENVLKRKADYLDLDDNVYVGVAPRISNVIHDDFGN 170
Query: 283 -----DQDAVVEC-----FKVHMLDEEWGKWVDVKNLRDRAFVLSRSCNFSVSAKE 328
DQ+ +EC F V+ +DEE GKWV+VK+LRD A V++ FSV A E
Sbjct: 171 EKCNVDQEVEIECPKMVGFNVYKVDEELGKWVEVKSLRDSAVVMATDTCFSVMAHE 226
>gb|AAO23598.1| At2g24250/F27D4.16 [Arabidopsis thaliana]
gi|20197499|gb|AAD03386.2| Expressed protein
[Arabidopsis thaliana] gi|14335044|gb|AAK59786.1|
At2g24250/F27D4.16 [Arabidopsis thaliana]
gi|18400492|ref|NP_565565.1| F-box family protein
[Arabidopsis thaliana]
Length = 374
Score = 72.4 bits (176), Expect = 2e-11
Identities = 97/350 (27%), Positives = 150/350 (42%), Gaps = 59/350 (16%)
Query: 6 DWSHLPKELWSKIGKYLDNH-IDILRFRSVCESFRSSIPPSHPNS--------PSFPLQI 56
DWS LP+EL I +L++H D + RSVC S+RS+ P P+S P+FPL+
Sbjct: 15 DWSQLPEELLHIISTHLEDHYFDAVHARSVCRSWRSTFP--FPSSLLRQSYSLPAFPLES 72
Query: 57 PHTIFDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPI 116
D L + ++L P A + ++ +L + + +N L SP+
Sbjct: 73 K----DLCCTLEKVPLFLFRVLTP------PDAADASSEYFLGGLGQDKSNDHVELPSPL 122
Query: 117 SDCKLSYPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYVSKVVFYPNSPRINVG 176
+ S ++ + PI+ N+L+ ++I L Y Y F P + + G
Sbjct: 123 ---QCSVKVNVPGTEPILMNMLDCQIIPLGHKYRLMIGCNPEEY--SAAFLPLNEQGGGG 177
Query: 177 DCVACCIFQEGKLGFMKYGDTKW-KLVDENNFFYDDVIVFKGLFYVTDRWGTISWIDISS 235
+ VA + L ++ + +W +L + ++ F+G FY T G ID SS
Sbjct: 178 EFVALLDCTDLFL-VLRSTEMRWIRLEKPSTASCKELFTFRGRFYATFFNGDTFVIDPSS 236
Query: 236 LRLIQFAPPLCGFGNKKHLVESCGN--LYVVDRYYEGENMRSNNVGRHHDQDAVVECFKV 293
L A PL + LV S GN L++V + + C +V
Sbjct: 237 LE----ATPLTPHIDSNFLVPS-GNEELFLVKTDF-------------------LRC-RV 271
Query: 294 HMLDEEWGKWVDVKNLRDRAFVLSRSC-NFSVSAKEL---IGYQGNCIYF 339
LDEE +WV+V +L DR L NF SAKEL G G+ I F
Sbjct: 272 SRLDEEAAEWVEVSDLGDRVLFLGGHLGNFYCSAKELPHGCGLTGDSILF 321
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.140 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 728,910,521
Number of Sequences: 2540612
Number of extensions: 32840320
Number of successful extensions: 67092
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 66923
Number of HSP's gapped (non-prelim): 136
length of query: 377
length of database: 863,360,394
effective HSP length: 130
effective length of query: 247
effective length of database: 533,080,834
effective search space: 131670965998
effective search space used: 131670965998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)
Medicago: description of AC149582.6