BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149576.1 - phase: 1
(110 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD27418.1| c6 type cytochrome [Arabidopsis thaliana] gi|184... 195 3e-49
dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana] 195 3e-49
ref|XP_478747.1| cytochrome C6, chloroplast precursor-like prote... 113 1e-24
ref|YP_172278.1| putative cytochrome C6-2 [Synechococcus elongat... 72 4e-12
ref|YP_171984.1| cytochrome C6 soluble cytochrome f [Synechococc... 65 3e-10
sp|P00112|CYC6_MICAE Cytochrome c6 (Soluble cytochrome f) (Cytoc... 65 4e-10
ref|YP_170799.1| cytochrome c553 [Synechococcus elongatus PCC 63... 64 7e-10
sp|Q8WKJ8|CYC6_PORYE Cytochrome c6 precursor (Soluble cytochrome... 64 7e-10
ref|NP_924926.1| cytochrome c6 [Gloeobacter violaceus PCC 7421] ... 64 9e-10
sp|P00114|CYC6_SYNLI Cytochrome c6 (Soluble cytochrome f) (Cytoc... 64 1e-09
sp|P00110|CYC6_BUMFI Cytochrome c6 (Soluble cytochrome f) (Cytoc... 64 1e-09
sp|P00111|CYC6_PORTE Cytochrome c6 (Soluble cytochrome f) (Cytoc... 63 2e-09
ref|NP_682073.1| cytochrome c553 [Thermosynechococcus elongatus ... 62 3e-09
sp|Q9F1L9|CYC6_SYNVU Cytochrome c6 precursor (Soluble cytochrome... 62 3e-09
sp|P0A3Y0|CYC6_SYNEN Cytochrome c6 (Soluble cytochrome f) (Cytoc... 62 3e-09
ref|NP_440674.1| cytochrome c553 [Synechocystis sp. PCC 6803] gi... 62 4e-09
sp|Q9TLW1|CYC6_CYACA Cytochrome c6 precursor (Soluble cytochrome... 62 4e-09
sp|P51200|CYC6_PORPU Cytochrome c6 precursor (Soluble cytochrome... 62 4e-09
gb|AAF12937.1| unknown; cytochrome c553 [Cyanidium caldarium] gi... 62 4e-09
sp|P00109|CYC6_ALAES Cytochrome c6 (Soluble cytochrome f) (Cytoc... 61 6e-09
>emb|CAD27418.1| c6 type cytochrome [Arabidopsis thaliana]
gi|18422509|ref|NP_568640.1| cytochrome c6 (ATC6)
[Arabidopsis thaliana] gi|16323250|gb|AAL15359.1|
AT5g45040/K21C13_23 [Arabidopsis thaliana]
gi|13926305|gb|AAK49619.1| AT5g45040/K21C13_23
[Arabidopsis thaliana] gi|27805454|sp|Q93VA3|CYC6_ARATH
Cytochrome c6, chloroplast precursor (Soluble cytochrome
f) (Cytochrome c553) (Cytochrome c-553) (Cytochrome
c-552) (Atc6)
Length = 175
Score = 195 bits (495), Expect = 3e-49
Identities = 85/108 (78%), Positives = 101/108 (92%)
Query: 1 SIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGK 60
S+ QT+DIQRGATLF++ CIGCHD GGNIIQPG+TLFTKDL+RNGVDTEEEIYRVTY+GK
Sbjct: 68 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGK 127
Query: 61 GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSIETE 108
GRMPGFG++C PRGQCTFG RL+DE+IK+LAEFVK QAD+GWP++ T+
Sbjct: 128 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTVSTD 175
>dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana]
Length = 151
Score = 195 bits (495), Expect = 3e-49
Identities = 85/108 (78%), Positives = 101/108 (92%)
Query: 1 SIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGK 60
S+ QT+DIQRGATLF++ CIGCHD GGNIIQPG+TLFTKDL+RNGVDTEEEIYRVTY+GK
Sbjct: 44 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGK 103
Query: 61 GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSIETE 108
GRMPGFG++C PRGQCTFG RL+DE+IK+LAEFVK QAD+GWP++ T+
Sbjct: 104 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTVSTD 151
>ref|XP_478747.1| cytochrome C6, chloroplast precursor-like protein [Oryza sativa
(japonica cultivar-group)] gi|34393286|dbj|BAC83200.1|
cytochrome C6, chloroplast precursor-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 73
Score = 113 bits (283), Expect = 1e-24
Identities = 48/68 (70%), Positives = 59/68 (86%)
Query: 39 KDLQRNGVDTEEEIYRVTYYGKGRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQA 98
KDL+RNGV TE+E+Y +TYYGKGRMPGFG++C PRGQCTFG RL ++DIK+LA FVK QA
Sbjct: 2 KDLERNGVATEDELYNITYYGKGRMPGFGEKCTPRGQCTFGPRLVEDDIKLLAAFVKSQA 61
Query: 99 DKGWPSIE 106
+ GWP I+
Sbjct: 62 ENGWPKID 69
>ref|YP_172278.1| putative cytochrome C6-2 [Synechococcus elongatus PCC 6301]
gi|56686536|dbj|BAD79758.1| putative cytochrome C6-2
[Synechococcus elongatus PCC 6301]
gi|45513936|ref|ZP_00165502.1| COG2010: Cytochrome c,
mono- and diheme variants [Synechococcus elongatus PCC
7942]
Length = 115
Score = 71.6 bits (174), Expect = 4e-12
Identities = 38/93 (40%), Positives = 49/93 (51%), Gaps = 12/93 (12%)
Query: 11 GATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGFGKEC 70
GA LF C+GCH GGNII+ G TL K L++NG DT E I + GK M +
Sbjct: 33 GAALFEAQCVGCHIGGGNIIRRGKTLQLKALKKNGYDTAEAIATIVSQGKNNMSAYSD-- 90
Query: 71 MPRGQCTFGARLEDEDIKILAEFVKLQADKGWP 103
RL E+I I++ +V QA+ GWP
Sbjct: 91 ----------RLSPEEIAIVSAYVLEQANAGWP 113
>ref|YP_171984.1| cytochrome C6 soluble cytochrome f [Synechococcus elongatus PCC
6301] gi|56686242|dbj|BAD79464.1| cytochrome C6 soluble
cytochrome f [Synechococcus elongatus PCC 6301]
gi|53763115|ref|ZP_00163664.2| COG2010: Cytochrome c,
mono- and diheme variants [Synechococcus elongatus PCC
7942]
Length = 119
Score = 65.5 bits (158), Expect = 3e-10
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGF 66
D+Q GA LF C CH GGN+I TL + L+R G+D+ I + YGK MP F
Sbjct: 33 DLQVGARLFQSNCTTCHLNGGNVINGQKTLRQEALRRYGMDSVAAIQKQVTYGKNAMPAF 92
Query: 67 GKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSI 105
G+ RL E I+ +A +V +A++GW ++
Sbjct: 93 GQ------------RLSPEQIEAVATYVFDRAERGWTAL 119
>sp|P00112|CYC6_MICAE Cytochrome c6 (Soluble cytochrome f) (Cytochrome c553) (Cytochrome
c-553)
Length = 81
Score = 65.1 bits (157), Expect = 4e-10
Identities = 35/92 (38%), Positives = 46/92 (49%), Gaps = 12/92 (13%)
Query: 11 GATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGFGKEC 70
GA++FS C CH G N++ TL +DL + G D+ E I G G MP
Sbjct: 2 GASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMP------ 55
Query: 71 MPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
FG RL EDI+ +A +V QA+KGW
Sbjct: 56 ------AFGGRLSAEDIEAVANYVLAQAEKGW 81
>ref|YP_170799.1| cytochrome c553 [Synechococcus elongatus PCC 6301]
gi|256652|gb|AAB23485.1| cytochrome c-533
[Synechococcus] gi|60416354|sp|P07497|CYC6_SYNP6
Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
gi|56685057|dbj|BAD78279.1| cytochrome c553
[Synechococcus elongatus PCC 6301]
gi|117934|sp|P25935|CYC6_SYNP7 Cytochrome c6 precursor
(Soluble cytochrome f) (Cytochrome c553) (Cytochrome
c-553) gi|45513116|ref|ZP_00164682.1| COG2010:
Cytochrome c, mono- and diheme variants [Synechococcus
elongatus PCC 7942]
Length = 111
Score = 64.3 bits (155), Expect = 7e-10
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 3 AQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGR 62
AQ D+ G +FS C CH G N++ P TL DL + G+ + E I GKG
Sbjct: 22 AQAADLAHGGQVFSANCAACHLGGRNVVNPAKTLQKADLDQYGMASIEAITTQVTNGKGA 81
Query: 63 MPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP FG++L +DI +A +V Q++KGW
Sbjct: 82 MP------------AFGSKLSADDIADVASYVLDQSEKGW 109
>sp|Q8WKJ8|CYC6_PORYE Cytochrome c6 precursor (Soluble cytochrome f) (Cytochrome c553)
(Cytochrome c-553) gi|18146964|dbj|BAB82501.1|
cytochrome c6 [Porphyra yezoensis]
Length = 110
Score = 64.3 bits (155), Expect = 7e-10
Identities = 37/101 (36%), Positives = 47/101 (45%), Gaps = 12/101 (11%)
Query: 2 IAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKG 61
IA D+ G +FS C CH G N I P TL L+ N ++T + I GK
Sbjct: 22 IAFAADLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNTIDAITYQVQNGKN 81
Query: 62 RMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP FG RL DEDI+ A +V Q++KGW
Sbjct: 82 AMP------------AFGGRLVDEDIEDAANYVLSQSEKGW 110
>ref|NP_924926.1| cytochrome c6 [Gloeobacter violaceus PCC 7421]
gi|35212547|dbj|BAC89921.1| cytochrome c6 [Gloeobacter
violaceus PCC 7421]
Length = 114
Score = 63.9 bits (154), Expect = 9e-10
Identities = 34/102 (33%), Positives = 49/102 (47%), Gaps = 10/102 (9%)
Query: 1 SIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGK 60
S+ D+ +G +F C CH G N + P TL +DL++ +DT I Y GK
Sbjct: 21 SLQAAADLAQGEKVFKANCAMCHAGGRNTVNPAKTLKIEDLKKYKMDTAAAISAQLYNGK 80
Query: 61 GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
G MP FGK +L+ + I + +V QA+KGW
Sbjct: 81 GAMPAFGK----------NGKLKQDQIDSVTAYVLDQANKGW 112
>sp|P00114|CYC6_SYNLI Cytochrome c6 (Soluble cytochrome f) (Cytochrome c553) (Cytochrome
c-553)
Length = 87
Score = 63.5 bits (153), Expect = 1e-09
Identities = 34/96 (35%), Positives = 49/96 (50%), Gaps = 12/96 (12%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGF 66
D+ GA +FS C CH GGN++ TL + L++ G+++E+ I +GK MP
Sbjct: 2 DLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMNSEDAIIYQVQHGKNAMP-- 59
Query: 67 GKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
F RL DE I+ +A +V QA KGW
Sbjct: 60 ----------AFAGRLTDEQIQDVAAYVLDQAAKGW 85
>sp|P00110|CYC6_BUMFI Cytochrome c6 (Soluble cytochrome f) (Cytochrome c553) (Cytochrome
c-553)
Length = 86
Score = 63.5 bits (153), Expect = 1e-09
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEI-YRVTYYGKGRMPG 65
DI+ G +F+ C CH G N+I P TL L+ NG++ I Y+VT
Sbjct: 2 DIENGERIFTANCAACHAGGNNVIMPEKTLKKDALEANGMNAVSAITYQVTN-------- 53
Query: 66 FGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
GK MP FG RL D DI+ +A +V Q+++GW
Sbjct: 54 -GKNAMP----AFGGRLSDSDIEDVANYVLSQSEQGW 85
>sp|P00111|CYC6_PORTE Cytochrome c6 (Soluble cytochrome f) (Cytochrome c553) (Cytochrome
c-553) gi|14278691|pdb|1GDV|A Chain A, Crystal Structure
Of Cytochrome C6 From Red Alga Porphyra Yezoensis At
1.57 A Resolution gi|7430459|pir||JC5849 cytochrome c6 -
red alga (Porphyra yezoensis)
Length = 85
Score = 62.8 bits (151), Expect = 2e-09
Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGF 66
D+ G +FS C CH G N I P TL L+ N ++T + I GK MP
Sbjct: 2 DLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNTIDAITYQVQNGKNAMP-- 59
Query: 67 GKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
FG RL DEDI+ A +V Q++KGW
Sbjct: 60 ----------AFGGRLVDEDIEDAANYVLSQSEKGW 85
>ref|NP_682073.1| cytochrome c553 [Thermosynechococcus elongatus BP-1]
gi|61222454|sp|P0A3X9|CYC6_SYNEL Cytochrome c6 precursor
(Soluble cytochrome f) (Cytochrome c553) (Cytochrome
c-553) gi|22295007|dbj|BAC08835.1| cytochrome c553
[Thermosynechococcus elongatus BP-1]
gi|12039019|dbj|BAB20061.1| cytochrome c553
[Thermosynechococcus elongatus]
Length = 112
Score = 62.4 bits (150), Expect = 3e-09
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 3 AQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGR 62
A D+ GA +FS C CH GGN++ TL + L++ G+ +E+ I +GK
Sbjct: 23 ALAADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSEDAIIYQVQHGKNA 82
Query: 63 MPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP F RL DE I+ +A +V QA KGW
Sbjct: 83 MP------------AFAGRLTDEQIQDVAAYVLDQAAKGW 110
>sp|Q9F1L9|CYC6_SYNVU Cytochrome c6 precursor (Soluble cytochrome f) (Cytochrome c553)
(Cytochrome c-553) gi|12039024|dbj|BAB20065.1|
cytochrome c553 [Thermosynechococcus vulcanus]
Length = 112
Score = 62.4 bits (150), Expect = 3e-09
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 3 AQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGR 62
A D+ GA +FS C CH GGN++ TL + L++ G+ +E+ I +GK
Sbjct: 23 ALAADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSEDAIIYQVQHGKNA 82
Query: 63 MPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP F RL DE I+ +A +V QA KGW
Sbjct: 83 MP------------AFAGRLTDEQIQDVAAYVLDQAAKGW 110
>sp|P0A3Y0|CYC6_SYNEN Cytochrome c6 (Soluble cytochrome f) (Cytochrome c553) (Cytochrome
c-553) gi|3114384|pdb|1C6S| The Solution Structure Of
Cytochrome C6 From The Thermophilic Cyanobacterium
Synechococcus Elongatus, Nmr, 20 Structures
Length = 87
Score = 62.0 bits (149), Expect = 3e-09
Identities = 34/96 (35%), Positives = 48/96 (49%), Gaps = 12/96 (12%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGF 66
D+ GA +FS C CH GGN++ TL + L++ G+ +E+ I +GK MP
Sbjct: 2 DLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSEDAIIYQVQHGKNAMP-- 59
Query: 67 GKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
F RL DE I+ +A +V QA KGW
Sbjct: 60 ----------AFAGRLTDEQIQDVAAYVLDQAAKGW 85
>ref|NP_440674.1| cytochrome c553 [Synechocystis sp. PCC 6803]
gi|1652432|dbj|BAA17354.1| cytochrome c553
[Synechocystis sp. PCC 6803]
gi|1169162|sp|P46445|CYC6_SYNY3 Cytochrome c6 precursor
(Soluble cytochrome f) (Cytochrome c553) (Cytochrome
c-553) gi|468929|gb|AAA17489.1| cytochrome c553
Length = 120
Score = 61.6 bits (148), Expect = 4e-09
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 3 AQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGR 62
A D+ G +F+ C CH+ G N I P TL DL+ NG ++ I G G
Sbjct: 33 ALAADLAHGKAIFAGNCAACHNGGLNAINPSKTLKMADLEANGKNSVAAIVAQITNGNGA 92
Query: 63 MPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MPG F R+ D D++ +A +V QA+KGW
Sbjct: 93 MPG------------FKGRISDSDMEDVAAYVLDQAEKGW 120
>sp|Q9TLW1|CYC6_CYACA Cytochrome c6 precursor (Soluble cytochrome f) (Cytochrome c553)
(Cytochrome c-553)
Length = 109
Score = 61.6 bits (148), Expect = 4e-09
Identities = 32/101 (31%), Positives = 47/101 (45%), Gaps = 13/101 (12%)
Query: 2 IAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKG 61
+ + +++ G +FS C CH G N+I P TL + L+ N + I GK
Sbjct: 22 VVYSANLEHGEQIFSANCAACHAGGNNVIMPEKTLKAEALEANNIKNISAIANQVKNGKN 81
Query: 62 RMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP F +RL D DI+ +A +V +ADKGW
Sbjct: 82 AMPSF-------------SRLSDSDIEDVANYVLSKADKGW 109
>sp|P51200|CYC6_PORPU Cytochrome c6 precursor (Soluble cytochrome f) (Cytochrome c553)
(Cytochrome c-553) gi|1276666|gb|AAC08086.1| cytochrome
c553 [Porphyra purpurea] gi|11465666|ref|NP_053810.1|
cytochrome c553 [Porphyra purpurea]
Length = 110
Score = 61.6 bits (148), Expect = 4e-09
Identities = 38/102 (37%), Positives = 50/102 (48%), Gaps = 14/102 (13%)
Query: 2 IAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEI-YRVTYYGK 60
+A D+ G +FS C CH G N I P TL L+ N ++ + I Y+VT
Sbjct: 22 VAFAADLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNGIDAITYQVTN--- 78
Query: 61 GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
GK MP FG RL DEDI+ A +V Q++KGW
Sbjct: 79 ------GKNAMP----AFGGRLVDEDIEDAANYVLSQSEKGW 110
>gb|AAF12937.1| unknown; cytochrome c553 [Cyanidium caldarium]
gi|11465452|ref|NP_045157.1| cytochrome c553 [Cyanidium
caldarium]
Length = 114
Score = 61.6 bits (148), Expect = 4e-09
Identities = 32/101 (31%), Positives = 47/101 (45%), Gaps = 13/101 (12%)
Query: 2 IAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKG 61
+ + +++ G +FS C CH G N+I P TL + L+ N + I GK
Sbjct: 27 VVYSANLEHGEQIFSANCAACHAGGNNVIMPEKTLKAEALEANNIKNISAIANQVKNGKN 86
Query: 62 RMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP F +RL D DI+ +A +V +ADKGW
Sbjct: 87 AMPSF-------------SRLSDSDIEDVANYVLSKADKGW 114
>sp|P00109|CYC6_ALAES Cytochrome c6 (Soluble cytochrome f) (Cytochrome c553) (Cytochrome
c-553)
Length = 86
Score = 61.2 bits (147), Expect = 6e-09
Identities = 38/98 (38%), Positives = 49/98 (49%), Gaps = 14/98 (14%)
Query: 6 IDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEI-YRVTYYGKGRMP 64
IDI G +F+ C CH G N+I P TL L N + + I Y+VT
Sbjct: 1 IDINNGENIFTANCSACHAGGNNVIMPEKTLKKDALADNKMVSVNAITYQVTN------- 53
Query: 65 GFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
GK MP FG+RL + DI+ +A FV Q+DKGW
Sbjct: 54 --GKNAMP----AFGSRLAETDIEDVANFVLTQSDKGW 85
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,284,188
Number of Sequences: 2540612
Number of extensions: 7905065
Number of successful extensions: 18454
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 18305
Number of HSP's gapped (non-prelim): 146
length of query: 110
length of database: 863,360,394
effective HSP length: 86
effective length of query: 24
effective length of database: 644,867,762
effective search space: 15476826288
effective search space used: 15476826288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC149576.1