Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149496.4 - phase: 0 
         (475 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAQ82034.1| unknown [Pisum sativum]                                281  4e-74
gb|AAQ82030.1| unknown [Pisum sativum]                                279  2e-73
gb|AAQ82032.1| unknown [Pisum sativum]                                276  1e-72
gb|AAQ82036.1| unknown [Pisum sativum]                                258  3e-67
gb|AAT39965.1| hypothetical protein [Solanum demissum]                 65  4e-09
dbj|BAC53932.1| hypothetical protein [Nicotiana tabacum]               56  2e-06
ref|XP_474655.1| OSJNBa0052P16.6 [Oryza sativa (japonica cultiva...    48  6e-04
emb|CAE01942.2| OSJNBa0073L13.4 [Oryza sativa (japonica cultivar...    46  0.002
ref|XP_474001.1| OSJNBa0089N06.23 [Oryza sativa (japonica cultiv...    45  0.004
emb|CAE03873.2| OSJNBb0015N08.1 [Oryza sativa (japonica cultivar...    45  0.006
emb|CAD41880.2| OSJNBa0041A02.27 [Oryza sativa (japonica cultiva...    45  0.006
ref|NP_915301.1| putative mutator-like transposase [Oryza sativa...    44  0.011
emb|CAI44652.1| OSJNBa0096F01.20 [Oryza sativa (japonica cultiva...    44  0.011
gb|AAP54600.1| mutator-like transposase [Oryza sativa (japonica ...    44  0.014
gb|AAX95472.1| SWIM zinc finger, putative [Oryza sativa (japonic...    44  0.014
gb|AAP54539.1| putative Mu transposable element [Oryza sativa (j...    43  0.019
gb|AAP53819.1| putative mutator-like transposase [Oryza sativa (...    43  0.019
ref|NP_916824.1| putative mutator-like transposase [Oryza sativa...    43  0.019
ref|XP_475854.1| putative mutator transposase [Oryza sativa (jap...    43  0.025
ref|XP_470220.1| Putative mutator-like transposase [Oryza sativa...    43  0.025

>gb|AAQ82034.1| unknown [Pisum sativum]
          Length = 562

 Score =  281 bits (718), Expect = 4e-74
 Identities = 174/470 (37%), Positives = 247/470 (52%), Gaps = 22/470 (4%)

Query: 6   RSIKKYTFKKPDLTRLRELASHVT--NPRDFRERHGRLLDLLKVKVEDGILETLVQFYDP 63
           R    Y+F +  LT L EL++ +T  N + F ++HG +L LLK+ V+   L+TL+QFYDP
Sbjct: 25  RKTCSYSFHREPLTSLIELSNLMTSGNQKGFVDQHGDILTLLKMVVDPVPLQTLLQFYDP 84

Query: 64  ICHCFTFPDYQLVPTLEEYSFWVGLPVSEGEPFNGLEPSPKNATIAEALHLKPSDLVHPH 123
             HCFTF DYQL PTLEEYS  + +PV    PF  +        +A ALHL   + V   
Sbjct: 85  ELHCFTFQDYQLAPTLEEYSILLSVPVRYQVPFLDVPKEVDFGVVARALHLGIKE-VSDS 143

Query: 124 FTIKNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLIYGLFLFPNMDNFVDLNAIKIF 183
           +    ++ GL  KFL + A +  +     AF +   ++IYG+ LFP+M NFVD  A+ IF
Sbjct: 144 WKYSGDVVGLPLKFLLRVAREEAEKGSWEAFRAQLAVMIYGIVLFPSMPNFVDYAAVSIF 203

Query: 184 LAKNPVPTLLANTYHSIHHRNIREGGLIVCCAPLLYRWYASHLTKSVFSKENSGKASWSE 243
           +  NPVPTLLA+TY++IH R+  +GG I CC PLL RW+ S L  S    +      W++
Sbjct: 204 IGGNPVPTLLADTYYAIHSRH-GKGGAIRCCLPLLLRWFLSLLPVSGPFVDAQSTHKWTQ 262

Query: 244 RIMPLTPADIVWVHAGTNTAGIIGSCGEFENVPLIGTCGGITYNPTLAMRQYGYPMKGRP 303
           R+M LT  DI W     +   +I SCG F NVPL+GT G I YNP L++RQ G+ MKGRP
Sbjct: 263 RVMSLTSYDIRWQSYRMDVRNVIMSCGGFRNVPLVGTRGCINYNPVLSLRQLGFVMKGRP 322

Query: 304 DSLSLSNEFYLNKNDHTNLRMRFVQAWHSIRKFDGIQLGRKQSFAHESYTQWVIDRATAF 363
               ++   Y  K        +  +AW SI   DG  LG+K   A   YT WV +R    
Sbjct: 323 LEAEVAESVYFEKQSDPARLEQIGRAWKSIGVKDGSVLGKKFVVAMPDYTDWVKERVETL 382

Query: 364 GMPYTLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL 423
            +PY     L    P I    +P   E Y++ L E         R  + K++D       
Sbjct: 383 LLPYDRMEPLQEQPPSILAESVP--AEHYKQALME--------NRRLRGKEQD------- 425

Query: 424 LEQEAYDSRQKDVIIAKLNERIKEKDAALDRIPGRKKKRMD-LFDGPHSD 472
            + E Y ++   + +A     ++E+DA+  R   R  + M+ + D  H +
Sbjct: 426 TQLELYKAKADKLNLAHQLRGVREEDASRLRSKKRSYEEMESMLDAEHRE 475


>gb|AAQ82030.1| unknown [Pisum sativum]
          Length = 562

 Score =  279 bits (713), Expect = 2e-73
 Identities = 173/470 (36%), Positives = 249/470 (52%), Gaps = 22/470 (4%)

Query: 6   RSIKKYTFKKPDLTRLRELASHVT--NPRDFRERHGRLLDLLKVKVEDGILETLVQFYDP 63
           R    Y+F +  LT L EL++ +T  N + F +++G +L LLK+ V+   L+TL+QFYDP
Sbjct: 25  RKTCSYSFHREPLTSLIELSNLMTSGNQKGFVDQYGDILTLLKMVVDPVPLQTLLQFYDP 84

Query: 64  ICHCFTFPDYQLVPTLEEYSFWVGLPVSEGEPFNGLEPSPKNATIAEALHLKPSDLVHPH 123
             HCFTF DYQL PTLEEYS  + +PV    PF  +        +A ALHL   + V  +
Sbjct: 85  ELHCFTFQDYQLAPTLEEYSILLSVPVRYQVPFLDVPKEVDFRVVARALHLGIKE-VSDN 143

Query: 124 FTIKNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLIYGLFLFPNMDNFVDLNAIKIF 183
           +    ++ GL  KFL + A +  +     AF +   ++IYG+ LFP+M NFVD  A+ IF
Sbjct: 144 WKSSGDVVGLPLKFLLRVAREEAEKGSWEAFHAQLAVMIYGIVLFPSMPNFVDYAAVSIF 203

Query: 184 LAKNPVPTLLANTYHSIHHRNIREGGLIVCCAPLLYRWYASHLTKSVFSKENSGKASWSE 243
           +  NPVPTLLA+TY++IH R+  +GG I CC PLL RW+ S L  S    +      W++
Sbjct: 204 IGGNPVPTLLADTYYAIHSRH-GKGGAIRCCLPLLLRWFLSLLPVSGPFVDAQSTHKWTQ 262

Query: 244 RIMPLTPADIVWVHAGTNTAGIIGSCGEFENVPLIGTCGGITYNPTLAMRQYGYPMKGRP 303
           R+M LT  DI W     +   +I SCG F NVPL+GT G I YNP L++RQ G+ MKGRP
Sbjct: 263 RVMSLTSYDIRWQSYRMDVRNVIMSCGGFRNVPLVGTRGCINYNPVLSLRQLGFVMKGRP 322

Query: 304 DSLSLSNEFYLNKNDHTNLRMRFVQAWHSIRKFDGIQLGRKQSFAHESYTQWVIDRATAF 363
               ++   Y  K        +  +AW SI   DG  LG+K   A   YT WV +R    
Sbjct: 323 LEAEIAESVYFEKQSDPARLEQIGRAWKSIGVKDGSVLGKKFVVAMPDYTDWVKERVETL 382

Query: 364 GMPYTLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL 423
            +PY     L    P I    +P   E Y++ L E         R  ++K++D       
Sbjct: 383 LLPYDRMEPLQEQPPLILAESVP--AEHYKQALME--------NRRLREKEQD------- 425

Query: 424 LEQEAYDSRQKDVIIAKLNERIKEKDAALDRIPGRKKKRMD-LFDGPHSD 472
            + E Y ++   + +A     ++E+DA+  R   R  + M+ + D  H +
Sbjct: 426 TQMELYKAKAGRLNLAHQLRGVREEDASRLRSKKRSYEEMESMLDAEHRE 475


>gb|AAQ82032.1| unknown [Pisum sativum]
          Length = 562

 Score =  276 bits (705), Expect = 1e-72
 Identities = 172/470 (36%), Positives = 248/470 (52%), Gaps = 22/470 (4%)

Query: 6   RSIKKYTFKKPDLTRLRELASHVT--NPRDFRERHGRLLDLLKVKVEDGILETLVQFYDP 63
           R    Y+F +  LT L EL++ +T  N + F +++G +L LLK+ V+   L+TL+QFYDP
Sbjct: 25  RKTCSYSFHREPLTSLIELSNLMTSGNQKGFVDQYGDILTLLKMVVDPVPLQTLLQFYDP 84

Query: 64  ICHCFTFPDYQLVPTLEEYSFWVGLPVSEGEPFNGLEPSPKNATIAEALHLKPSDLVHPH 123
             HCFTF DYQL PTLEEYS  + +PV    PF  +        +A ALHL   + V   
Sbjct: 85  ELHCFTFQDYQLAPTLEEYSILLSVPVRYQVPFLDVPKEVDFRVVARALHLGIKE-VSDS 143

Query: 124 FTIKNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLIYGLFLFPNMDNFVDLNAIKIF 183
           +    ++ GL  KFL + A +  +     AF +   ++IYG+ LFP+M NFVD  A+ IF
Sbjct: 144 WKSSGDVVGLPLKFLLRVAREEAEKGSWEAFHAQLAVMIYGIVLFPSMPNFVDYAAVSIF 203

Query: 184 LAKNPVPTLLANTYHSIHHRNIREGGLIVCCAPLLYRWYASHLTKSVFSKENSGKASWSE 243
           +  NPVPTLLA+TY++IH R+  +GG I CC PLL RW+ S L  S    +      W++
Sbjct: 204 IGGNPVPTLLADTYYAIHSRH-GKGGAIRCCLPLLLRWFLSLLPVSGPFVDAQSTHKWTQ 262

Query: 244 RIMPLTPADIVWVHAGTNTAGIIGSCGEFENVPLIGTCGGITYNPTLAMRQYGYPMKGRP 303
           R+M LT  DI W     +   +I SCG F NVPLIGT G I YNP L++RQ G+ MKGRP
Sbjct: 263 RVMSLTSYDIRWQSYRMDVRNVIMSCGGFRNVPLIGTRGCINYNPVLSLRQLGFVMKGRP 322

Query: 304 DSLSLSNEFYLNKNDHTNLRMRFVQAWHSIRKFDGIQLGRKQSFAHESYTQWVIDRATAF 363
               ++      K        +  +AW SI   DG  LG+K + A   YT WV +R    
Sbjct: 323 LEAEVAESVCFEKRSDPARLEQIGRAWKSIGMKDGSVLGKKFAVAMPDYTDWVKERVETL 382

Query: 364 GMPYTLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL 423
            +PY     L    P I    +P   E Y++ L E         R  ++K++D       
Sbjct: 383 LLPYDRMEPLQEQPPLILAESVP--AEHYKQALME--------NRRLREKEQD------- 425

Query: 424 LEQEAYDSRQKDVIIAKLNERIKEKDAALDRIPGRKKKRMD-LFDGPHSD 472
            + E Y ++   + +A     ++E+DA+  R   R  + ++ + D  H +
Sbjct: 426 TQMELYKAKADSLNLAHQLRGVREEDASRLRSKKRSYEEVESMLDAEHRE 475


>gb|AAQ82036.1| unknown [Pisum sativum]
          Length = 546

 Score =  258 bits (659), Expect = 3e-67
 Identities = 166/470 (35%), Positives = 236/470 (49%), Gaps = 22/470 (4%)

Query: 6   RSIKKYTFKKPDLTRLRELASHVTNP--RDFRERHGRLLDLLKVKVEDGILETLVQFYDP 63
           R    Y+F +  LT L EL S + +   + F  + G +L LLK  V+   L+TL+QFYDP
Sbjct: 9   RKTCSYSFYREPLTSLIELGSLMPSDQLKGFVGQFGDILTLLKTVVDPVPLQTLLQFYDP 68

Query: 64  ICHCFTFPDYQLVPTLEEYSFWVGLPVSEGEPFNGLEPSPKNATIAEALHLKPSDLVHPH 123
              CFTF DYQL PTLEEYS  + +P+    PF  +        IA AL +   + V  +
Sbjct: 69  ELRCFTFQDYQLAPTLEEYSILMSIPIQHQVPFLDVPKEVDFRVIARALRMSVKE-VCDN 127

Query: 124 FTIKNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLIYGLFLFPNMDNFVDLNAIKIF 183
           +     + G+  KFL + A +  +      F +    +IYG+ LFP+M NF+D  AI IF
Sbjct: 128 WKPSGEVVGMPLKFLLRVAREEAEKGNWEVFHAQLAAMIYGIVLFPSMPNFIDHAAISIF 187

Query: 184 LAKNPVPTLLANTYHSIHHRNIREGGLIVCCAPLLYRWYASHLTKSVFSKENSGKASWSE 243
           +  NPVPTLLA+TY++IH R+  +GG I CC PLL RW+ S L  S    +      W++
Sbjct: 188 IGGNPVPTLLADTYYAIHSRH-GKGGAIRCCLPLLLRWFMSLLPASGPFMDTQSTLKWTQ 246

Query: 244 RIMPLTPADIVWVHAGTNTAGIIGSCGEFENVPLIGTCGGITYNPTLAMRQYGYPMKGRP 303
           R+M LT  DI W     +   ++ SCGEF NVPL+GT G I YNP L++RQ G+ M  RP
Sbjct: 247 RVMSLTSYDIRWQSYRMDVKDVVMSCGEFRNVPLVGTKGCINYNPVLSLRQLGFIMSRRP 306

Query: 304 DSLSLSNEFYLNKNDHTNLRMRFVQAWHSIRKFDGIQLGRKQSFAHESYTQWVIDRATAF 363
               +    Y  K        +  +AW SI   DG  LG+K + A   YT WV  R    
Sbjct: 307 LEAEIVESVYFEKRTDPVRLEQIGRAWKSIGVKDGSVLGKKFAIAMPDYTDWVKKRVETL 366

Query: 364 GMPYTLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL 423
            +PY     L    P I    +P   E Y++ L E  R           ++K+ +T M  
Sbjct: 367 LLPYDRMEPLQEQPPLILADSVP--AEHYKQALMENRR----------LREKEQDTRM-- 412

Query: 424 LEQEAYDSRQKDVIIAKLNERIKEKDAALDRIPGRKKKRMD-LFDGPHSD 472
              E Y ++   + +A     ++ +DA+  R   R  K M+ + D  H +
Sbjct: 413 ---ELYKAKADKLNLAHQLREMQGEDASRARSKKRSYKEMESMLDTEHRE 459


>gb|AAT39965.1| hypothetical protein [Solanum demissum]
          Length = 607

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)

Query: 36  ERHGRLLDLLKVKVEDGILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWV--GLPVSEG 93
           +R G L  LL V+    ++E LV F+DPI + F F D++L PTLEE   ++  G  + EG
Sbjct: 46  KRLGFLRSLLYVEPRRDLIEALVHFWDPIKNVFHFSDFELTPTLEEIGAFIGRGKNLHEG 105

Query: 94  EPFNGLEPSPKNATIAEALHLK-------------PSDLVHPHFTIKNNLQGLTAKFLYQ 140
           EP   +          E LH+              P + ++  +  K+  + L  K L+ 
Sbjct: 106 EPM--IPKHINGRRFLELLHINENEIGGCLDNGWVPLEFLYKRYGRKDGFE-LYGKKLHN 162

Query: 141 KASDFVKAKKTNAFESIFTLLIYGLFLFPNMDNFVDLNAIKIFLA--KNP----VPTLLA 194
                    +T+++++I T+   G+ +F      +++N   +  A  K P    VP +LA
Sbjct: 163 NGCRL--TWETHSYDAI-TVAFLGIMVFLKRGGKININLAAVITAFEKKPNITLVPMILA 219

Query: 195 NTYHSIHHRNIREGG-LIVCCAPLLYRWYASHLTKSVF------------------SKEN 235
           + Y ++     + GG     C  LL  W   H+    +                   K++
Sbjct: 220 DIYRAL--TICKNGGDYFEGCNMLLQLWMIEHIRHHPYVVDFKVECNDYIGGHEERIKDH 277

Query: 236 S---GKASWSERIMPLTPADIVWVHAGTNTAGIIGSCGEFENVPLIGTCGGITYNPTLAM 292
           S   G  +W + +  LT   IVW +    +A +I        + L+G  G   Y P   M
Sbjct: 278 SFPKGIEAWKKYLNNLTADKIVWNYHWFPSAEVIYMSTFRSFIVLMGLRGVQPYMPLRVM 337

Query: 293 RQYG 296
           RQ G
Sbjct: 338 RQLG 341


>dbj|BAC53932.1| hypothetical protein [Nicotiana tabacum]
          Length = 464

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 99/446 (22%), Positives = 167/446 (37%), Gaps = 100/446 (22%)

Query: 39  GRLLDLLKVKVEDGILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGEPFNG 98
           G L D++K+K  D ++E LV F+DP+ + F F D++L PTLEE   + G          G
Sbjct: 39  GALTDIMKIKPRDDLIEALVTFWDPVHNVFCFSDFELTPTLEEIDGYSGF---------G 89

Query: 99  LEPSPKNATIAEALHL-KPSDLVHPHFTIK--NNLQG------LTAKF-------LYQKA 142
            +   +      AL + +  DL++    I+  N ++G      L ++F       +++K 
Sbjct: 90  RDLRNQELIFPRALSVHRFFDLLNISKQIRKTNVVKGCCSFYFLYSRFGQPNGFEMHEKG 149

Query: 143 SDFVKAKKTNAFESIFTLLI--YGLFLFPNMDNFVD---LNAIKIFLAKNP---VPTLLA 194
            +  + K T      F  ++   G+ +FPN +  +D      +++   K      P +L+
Sbjct: 150 LNNKQNKDTWHIHRCFAFIMAFLGIMVFPNRERTIDTRIARVVQVLTTKEHHTLAPIILS 209

Query: 195 NTYHSIHHRNIREGG--LIVCCAPLLYRWYASHLTKSVF------SKEN----------- 235
           + Y ++    + + G      C  LL  W   HL           SK+N           
Sbjct: 210 DIYRAL---TLCKSGAKFFEGCNILLQMWLIEHLRHHPKFMSYGPSKDNFIDSYEERVKE 266

Query: 236 ----SGKASWSERIMPLTPADIVWVHAGTNTAGIIGSCGEFENVPLIGTCGGITYNPTLA 291
                G  +W   +  L    I W         +I       ++ L+G      Y P   
Sbjct: 267 YNSPEGVETWISHLRSLNACQIEWTLGWLPLREVIHMSALKSHLLLLGLRSVQPYMPHRV 326

Query: 292 MRQYG-YPMKGRPDSLSLSNEFYLNKNDHTNLRMRFV-QAWHSIR--KFDGIQLGRKQSF 347
           +RQ G Y +  + + LS+     +  +    L    + Q W+  R  K D       +  
Sbjct: 327 LRQLGRYQVVPKDEDLSVQ---VIELHPKAPLPEALIQQIWNGCRYLKGDTQVPDPARGE 383

Query: 348 AHESYTQWVIDRATAFGMPYTLPRFLSSTVPEIPLPLLPQTK-------EEYQERLAEAE 400
               Y  W       FG          S V ++P P  P  +       ++ QERLA  E
Sbjct: 384 VDPGYAIW-------FGK--------RSRVDDVPEPKRPTKRPHVQAFDDKIQERLAWGE 428

Query: 401 REIHMWKRECQKKDKDYETVMGLLEQ 426
           RE            K Y+T +  LE+
Sbjct: 429 RE------------KGYKTTIHALEE 442


>ref|XP_474655.1| OSJNBa0052P16.6 [Oryza sativa (japonica cultivar-group)]
           gi|38569201|emb|CAE04557.3| OSJNBa0052P16.6 [Oryza
           sativa (japonica cultivar-group)]
          Length = 1489

 Score = 48.1 bits (113), Expect = 6e-04
 Identities = 49/195 (25%), Positives = 86/195 (43%), Gaps = 28/195 (14%)

Query: 53  ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT--- 107
           +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 808 LLAALVDHWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWKEDITARF 867

Query: 108 --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
             +    HL P++ + P+ T+   K  L   TA  L+  A D++  +   A    + L +
Sbjct: 868 EQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYLVRRSLEA----YLLWL 923

Query: 163 YGLFLFPNM-DNFVDLNAIKIFLA-----KNPVP------TLLANTYHSIHHRNIR--EG 208
           +G  +F +   + VD   +    +        VP       +LA TYH++     +   G
Sbjct: 924 FGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYHALCEACTKTDAG 983

Query: 209 GLIVCCAPLLYRWYA 223
            +I  C  LL  W A
Sbjct: 984 AIIAGCPMLLQLWAA 998


>emb|CAE01942.2| OSJNBa0073L13.4 [Oryza sativa (japonica cultivar-group)]
            gi|50921337|ref|XP_471029.1| OSJNBa0073L13.4 [Oryza
            sativa (japonica cultivar-group)]
          Length = 1342

 Score = 46.2 bits (108), Expect = 0.002
 Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 31/220 (14%)

Query: 53   ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT--- 107
            +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 830  LLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWKEDITARF 889

Query: 108  --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
              +    HL P++ + P+ T+   K  L   TA  L+  A D+   +   A    + L +
Sbjct: 890  EQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLWL 945

Query: 163  YGLFLFPNM-DNFVDLNAIKIFLA-----KNPVP------TLLANTYHSIHHRNIR--EG 208
            +G  +F +   + VD   +    +        VP       +LA TY ++     +   G
Sbjct: 946  FGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAG 1005

Query: 209  GLIVCCAPLLYRWYASH---LTKSVFSKENSGKASWSERI 245
             +I  C  LL  W A     LT  +  +     A W+ R+
Sbjct: 1006 AIIAGCPMLLQLWAAESVVTLTSRLTRRGQLAGALWAPRV 1045


>ref|XP_474001.1| OSJNBa0089N06.23 [Oryza sativa (japonica cultivar-group)]
           gi|39546253|emb|CAE04262.3| OSJNBa0089N06.23 [Oryza
           sativa (japonica cultivar-group)]
          Length = 1597

 Score = 45.4 bits (106), Expect = 0.004
 Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 30/196 (15%)

Query: 53  ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGEPFNGL--------EPSPK 104
           +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++ G P   +        + + +
Sbjct: 779 LLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLA-GAPVGPVDCVFGWKEDITAR 837

Query: 105 NATIAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLL 161
              +    HL P++ + P+ T+   K  L   TA  L+  A D+   +   A    + LL
Sbjct: 838 FEQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLL 893

Query: 162 IYGLFLFPNM-DNFVDLNAIKI--FLA---KNPVP------TLLANTYHSIHHRNIR--E 207
           ++G  +F +   + VD   +    F+A      VP       +LA TY ++     +   
Sbjct: 894 LFGWVMFTSTHGHAVDFRLVHYARFIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDA 953

Query: 208 GGLIVCCAPLLYRWYA 223
           G +I  C  LL  W A
Sbjct: 954 GAIIAGCPMLLQLWAA 969


>emb|CAE03873.2| OSJNBb0015N08.1 [Oryza sativa (japonica cultivar-group)]
          Length = 775

 Score = 44.7 bits (104), Expect = 0.006
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 28/195 (14%)

Query: 53  ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT--- 107
           +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 129 LLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWKEDITARF 188

Query: 108 --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
             +    HL P++ + P+ T+   K  L   TA  L+  A D+   +   A    + L +
Sbjct: 189 EQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLWL 244

Query: 163 YGLFLFPN-----MDNFVDLNAIKIFLAK-NPVP------TLLANTYHSIHH--RNIREG 208
           +G  +F +     +D ++   A  I  A+   VP       +LA TY ++     N   G
Sbjct: 245 FGWVMFTSTHGHAVDFWLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTNTDAG 304

Query: 209 GLIVCCAPLLYRWYA 223
            +I  C  LL  W A
Sbjct: 305 AIIAGCPMLLQLWAA 319


>emb|CAD41880.2| OSJNBa0041A02.27 [Oryza sativa (japonica cultivar-group)]
            gi|50928523|ref|XP_473789.1| OSJNBa0041A02.27 [Oryza
            sativa (japonica cultivar-group)]
          Length = 1473

 Score = 44.7 bits (104), Expect = 0.006
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 28/195 (14%)

Query: 53   ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT--- 107
            +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 827  LLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWKEDITARF 886

Query: 108  --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
              +    HL P++ + P+ T+   K  L   TA  L+  A D+   +   A    + L +
Sbjct: 887  EQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLWL 942

Query: 163  YGLFLFPN-----MDNFVDLNAIKIFLAK-NPVP------TLLANTYHSIHH--RNIREG 208
            +G  +F +     +D ++   A  I  A+   VP       +LA TY ++     N   G
Sbjct: 943  FGWVMFTSTHGHAVDFWLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTNTDAG 1002

Query: 209  GLIVCCAPLLYRWYA 223
             +I  C  LL  W A
Sbjct: 1003 AIIAGCPMLLQLWAA 1017


>ref|NP_915301.1| putative mutator-like transposase [Oryza sativa (japonica
            cultivar-group)]
          Length = 1626

 Score = 43.9 bits (102), Expect = 0.011
 Identities = 57/242 (23%), Positives = 97/242 (39%), Gaps = 37/242 (15%)

Query: 6    RSIKKYTFKKPDLTRLRELASHVTNPRDFRERHGRLLDLLKVKVEDGILETLVQFYDPIC 65
            R +  Y  +   L  L  L     + RD  +R            +  +L  LV  + P  
Sbjct: 923  RHVPWYALRAAGLLPLCRLVEAAADDRDPAKRWD---------ADRSLLAALVDRWRPET 973

Query: 66   HCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGL-----EPSPKNATIAEALHLKPSD 118
            H F  P  ++ PTL++ S+ +GLP++     P +G+     E + +   +    HL P++
Sbjct: 974  HTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWKEEITARFEQVMRLPHLGPAN 1033

Query: 119  LVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLIYGLFLFPNM-DNF 174
             + P+ T+   K  L  LTA  L+  A D    +   A    + L ++G  +F +   + 
Sbjct: 1034 TLPPYSTVGPSKAWLLQLTADLLHPDADDNSVRRSLEA----YLLWLFGWVMFTSTHGHA 1089

Query: 175  VDLNAIKIFLA-----KNPVP------TLLANTYHSIHHRNIR--EGGLIVCCAPLLYRW 221
            VD   +    +        VP       +LA TY ++     +   G +I  C  LL  W
Sbjct: 1090 VDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAGAIIAGCPMLLQLW 1149

Query: 222  YA 223
             A
Sbjct: 1150 AA 1151


>emb|CAI44652.1| OSJNBa0096F01.20 [Oryza sativa (japonica cultivar-group)]
          Length = 1422

 Score = 43.9 bits (102), Expect = 0.011
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 14/126 (11%)

Query: 53  ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT--- 107
           +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 808 LLAALVDHWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWKEDITARF 867

Query: 108 --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
             +    HL P++ + P+ T+   K  L   TA  L+  A D++  +   A    + L +
Sbjct: 868 EQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYLVRRSLEA----YLLWL 923

Query: 163 YGLFLF 168
           +G  +F
Sbjct: 924 FGWVMF 929


>gb|AAP54600.1| mutator-like transposase [Oryza sativa (japonica cultivar-group)]
            gi|37536022|ref|NP_922313.1| mutator-like transposase
            [Oryza sativa (japonica cultivar-group)]
            gi|10140679|gb|AAG13514.1| mutator-like transposase
            [Oryza sativa (japonica cultivar-group)]
          Length = 1626

 Score = 43.5 bits (101), Expect = 0.014
 Identities = 58/242 (23%), Positives = 100/242 (40%), Gaps = 37/242 (15%)

Query: 6    RSIKKYTFKKPDLTRLRELASHVTNPRDFRERHGRLLDLLKVKVEDGILETLVQFYDPIC 65
            R +  Y  +   L  L  L     + RD  +R            +  +L  LV  + P  
Sbjct: 923  RHVPWYALRAAGLLPLCRLVEAAADDRDPAKRWD---------ADRSLLAALVDRWRPET 973

Query: 66   HCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT-----IAEALHLKPSD 118
            H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T     +    HL P++
Sbjct: 974  HTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWKEDITARFEQVMRLPHLGPAN 1033

Query: 119  LVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLIYGLFLFPN----- 170
             + P+ T+   K  L   TA  L+  A D+   +   A    + L ++G  +F +     
Sbjct: 1034 TLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLWLFGWVMFTSTHGHA 1089

Query: 171  MDNFVDLNAIKIFLAK-NPVP------TLLANTYHSIHHRNIR--EGGLIVCCAPLLYRW 221
            +D ++   A  I  A+   VP       +LA TY ++     +   G +I  C  LL  W
Sbjct: 1090 VDFWLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAGAIIAGCPMLLQLW 1149

Query: 222  YA 223
             A
Sbjct: 1150 AA 1151


>gb|AAX95472.1| SWIM zinc finger, putative [Oryza sativa (japonica cultivar-group)]
          Length = 1187

 Score = 43.5 bits (101), Expect = 0.014
 Identities = 48/195 (24%), Positives = 84/195 (42%), Gaps = 28/195 (14%)

Query: 53  ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEG--EPFNGLEPSPKNAT--- 107
           +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 539 LLAALVDRWRPETHTFHLPCGEMAPTLQDLSYLLGLPLAGAPVSPVDGVFGWKEDITARF 598

Query: 108 --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
             +    HL P++ + P+ T+   K  L   TA  L+  A D+   +   A    + L +
Sbjct: 599 EQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLWL 654

Query: 163 YGLFLFPNM-DNFVDLNAIKIFLA-----KNPVP------TLLANTYHSIHHRNIR--EG 208
           +G  +F +   + VD   +    +        VP       +LA TY ++     +   G
Sbjct: 655 FGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAG 714

Query: 209 GLIVCCAPLLYRWYA 223
            +I  C  LL  W A
Sbjct: 715 AIIAGCPMLLQLWAA 729


>gb|AAP54539.1| putative Mu transposable element [Oryza sativa (japonica
            cultivar-group)] gi|37535900|ref|NP_922252.1| putative Mu
            transposable element [Oryza sativa (japonica
            cultivar-group)] gi|22324952|gb|AAM95679.1| putative Mu
            transposable element [Oryza sativa (japonica
            cultivar-group)]
          Length = 1536

 Score = 43.1 bits (100), Expect = 0.019
 Identities = 48/195 (24%), Positives = 84/195 (42%), Gaps = 28/195 (14%)

Query: 53   ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT--- 107
            +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 959  LLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWKEDITARF 1018

Query: 108  --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
              +    HL P++ + P+ T+   K  L   TA  L+  A D+   +   A    + L +
Sbjct: 1019 EQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLWL 1074

Query: 163  YGLFLFPNM-DNFVDLNAIKIFLA-----KNPVP------TLLANTYHSIHHRNIR--EG 208
            +G  +F +   + VD   +    +        VP       +LA TY ++     +   G
Sbjct: 1075 FGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAG 1134

Query: 209  GLIVCCAPLLYRWYA 223
             +I  C  LL  W A
Sbjct: 1135 AIIAGCPMLLQLWAA 1149


>gb|AAP53819.1| putative mutator-like transposase [Oryza sativa (japonica
           cultivar-group)] gi|37534460|ref|NP_921532.1| putative
           mutator-like transposase [Oryza sativa (japonica
           cultivar-group)]
          Length = 1421

 Score = 43.1 bits (100), Expect = 0.019
 Identities = 48/195 (24%), Positives = 84/195 (42%), Gaps = 28/195 (14%)

Query: 53  ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT--- 107
           +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 783 LLAALVDRWRPETHMFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWKEDITARF 842

Query: 108 --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
             +    HL P++ + P+ T+   K  L   TA  L+  A D+   +   A    + L +
Sbjct: 843 EQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLWL 898

Query: 163 YGLFLFPNM-DNFVDLNAIKIFLA-----KNPVP------TLLANTYHSIHHRNIR--EG 208
           +G  +F +   + VD   +    +        VP       +LA TY ++     +   G
Sbjct: 899 FGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAG 958

Query: 209 GLIVCCAPLLYRWYA 223
            +I  C  LL  W A
Sbjct: 959 AIIAGCPMLLQLWAA 973


>ref|NP_916824.1| putative mutator-like transposase [Oryza sativa (japonica
            cultivar-group)]
          Length = 1604

 Score = 43.1 bits (100), Expect = 0.019
 Identities = 48/195 (24%), Positives = 84/195 (42%), Gaps = 28/195 (14%)

Query: 53   ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT--- 107
            +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 892  LLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAAVGPVDGVFGWKEDITARF 951

Query: 108  --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
              +    HL P++ + P+ T+   K  L   TA  L+  A D+   +   A    + L +
Sbjct: 952  EQVMRLPHLGPTNTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLWL 1007

Query: 163  YGLFLFPNM-DNFVDLNAIKIFLA-----KNPVP------TLLANTYHSIHHRNIR--EG 208
            +G  +F +   + VD   +    +        VP       +LA TY ++     +   G
Sbjct: 1008 FGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAG 1067

Query: 209  GLIVCCAPLLYRWYA 223
             +I  C  LL  W A
Sbjct: 1068 AIIAGCPMLLQLWAA 1082


>ref|XP_475854.1| putative mutator transposase [Oryza sativa (japonica cultivar-group)]
            gi|47900530|gb|AAT39265.1| putative mutator-like
            transposase [Oryza sativa (japonica cultivar-group)]
            gi|47900500|gb|AAT39257.1| putative mutator transposase
            [Oryza sativa (japonica cultivar-group)]
          Length = 1385

 Score = 42.7 bits (99), Expect = 0.025
 Identities = 47/196 (23%), Positives = 83/196 (41%), Gaps = 30/196 (15%)

Query: 53   ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGEPFNGLEP--------SPK 104
            +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++ G P   ++         + +
Sbjct: 959  LLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLA-GAPVGSVDGVVGWKEDITAR 1017

Query: 105  NATIAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLL 161
               +    HL P++ + P+ T+   K  L   TA  L+  A D+   +   A    + L 
Sbjct: 1018 FEQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLW 1073

Query: 162  IYGLFLFPNM-DNFVDLNAIKIFLA-----KNPVP------TLLANTYHSIHHRNIR--E 207
            ++G  +F +   + VD   +    +        VP       +LA TY ++     +   
Sbjct: 1074 LFGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDA 1133

Query: 208  GGLIVCCAPLLYRWYA 223
            G +I  C  LL  W A
Sbjct: 1134 GAIIAGCPMLLQLWAA 1149


>ref|XP_470220.1| Putative mutator-like transposase [Oryza sativa]
            gi|15451606|gb|AAK98730.1| Putative mutator-like
            transposase [Oryza sativa]
          Length = 2421

 Score = 42.7 bits (99), Expect = 0.025
 Identities = 48/195 (24%), Positives = 83/195 (41%), Gaps = 28/195 (14%)

Query: 53   ILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGE--PFNGLEPSPKNAT--- 107
            +L  LV  + P  H F  P  ++ PTL++ S+ +GLP++     P +G+    ++ T   
Sbjct: 865  LLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPIDGVFGWKEDITARF 924

Query: 108  --IAEALHLKPSDLVHPHFTI---KNNLQGLTAKFLYQKASDFVKAKKTNAFESIFTLLI 162
              +    HL P+  + P+ T+   K  L   TA  L+  A D+   +   A    + L +
Sbjct: 925  EQVMRLPHLGPTTTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA----YLLWL 980

Query: 163  YGLFLFPNM-DNFVDLNAIKIFLA-----KNPVP------TLLANTYHSIHHRNIR--EG 208
            +G  +F +   + VD   +    +        VP       +LA TY ++     +   G
Sbjct: 981  FGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAG 1040

Query: 209  GLIVCCAPLLYRWYA 223
             +I  C  LL  W A
Sbjct: 1041 AIIAGCPMLLQLWAA 1055


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.321    0.138    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 861,790,730
Number of Sequences: 2540612
Number of extensions: 38759573
Number of successful extensions: 99623
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 99321
Number of HSP's gapped (non-prelim): 323
length of query: 475
length of database: 863,360,394
effective HSP length: 132
effective length of query: 343
effective length of database: 527,999,610
effective search space: 181103866230
effective search space used: 181103866230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)


Medicago: description of AC149496.4