BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149305.8 - phase: 0 /pseudo
(439 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU44468.1| hypothetical protein AT3G01015 [Arabidopsis thali... 125 3e-27
gb|AAG51320.1| hypothetical protein; 557-2776 [Arabidopsis thali... 125 3e-27
emb|CAC01750.1| putative protein [Arabidopsis thaliana] gi|11358... 118 4e-25
ref|NP_197055.2| expressed protein [Arabidopsis thaliana] 118 4e-25
ref|NP_963719.1| hypothetical protein NEQ435 [Nanoarchaeum equit... 54 7e-06
emb|CAE66832.1| Hypothetical protein CBG12202 [Caenorhabditis br... 54 1e-05
ref|NP_179030.2| hypothetical protein [Arabidopsis thaliana] 54 1e-05
gb|EAA17642.1| Drosophila melanogaster CG2972 gene product [Plas... 54 1e-05
gb|EAA22410.1| hypothetical protein [Plasmodium yoelii yoelii] 53 2e-05
gb|AAG00554.1| retinitis pigmentosa GTPase regulator-like protei... 53 2e-05
ref|XP_603554.1| PREDICTED: similar to hypothetical protein FLJ3... 53 2e-05
ref|XP_229199.3| PREDICTED: similar to HIV TAT specific factor 1... 52 4e-05
ref|NP_214394.1| initiation factor IF-2 [Aquifex aeolicus VF5] g... 52 4e-05
ref|XP_647328.1| hypothetical protein DDB0189564 [Dictyostelium ... 52 4e-05
ref|XP_646210.1| hypothetical protein DDB0216685 [Dictyostelium ... 52 4e-05
ref|XP_638971.1| hypothetical protein DDB0185634 [Dictyostelium ... 52 4e-05
emb|CAA04133.1| cyclic nucleotide-gated channel beta subunit [Ra... 52 5e-05
ref|XP_640002.1| hypothetical protein DDB0186328 [Dictyostelium ... 52 5e-05
ref|XP_652301.1| conserved hypothetical protein [Entamoeba histo... 51 6e-05
ref|XP_641991.1| hypothetical protein DDB0206221 [Dictyostelium ... 51 6e-05
>gb|AAU44468.1| hypothetical protein AT3G01015 [Arabidopsis thaliana]
gi|67633614|gb|AAY78731.1| hypothetical protein
At3g01015 [Arabidopsis thaliana]
Length = 488
Score = 125 bits (313), Expect = 3e-27
Identities = 106/302 (35%), Positives = 146/302 (48%), Gaps = 61/302 (20%)
Query: 12 ENLNPNEFSNRTPLQKS----LTKGDNNCVNVV--VVSPQKRIRQRKFVVAKKK-KNDQS 64
EN NPN S+ TPL+KS K N V V SP+ RIR+R+FVV KK + +++
Sbjct: 33 ENSNPNFVSHSTPLEKSSKSSAQKNPKWKPNPVPAVFSPRNRIRERRFVVVKKNSRKEKN 92
Query: 65 PRKTVLCKCGEN--DDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEV 122
+V CKCG + KCVC AY LR SQE FF + E+
Sbjct: 93 DSASVDCKCGAKTISNMKKCVCIAYETLRASQEEFFNNRR--------------ESVSEI 138
Query: 123 IEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMH 182
E++ + D GNE+ + + + S++KRRREKV+EEAR S+PE GKVMH
Sbjct: 139 GESSQNLED-GNEQVEFGDSDETRV---------SLMKRRREKVLEEARMSIPEFGKVMH 188
Query: 183 LVKAFERLLSIKKEKEKNEEEEENDKKNKVMKWALPGLQFQQPVKDGDEQSEVVSSCCDD 242
LVKAFE+L K ++EEE D+ + +KW LPG+ S+ S +
Sbjct: 189 LVKAFEKLTCFPLSKVTSKEEE--DQIKQPLKWELPGM------------SQPKCSESET 234
Query: 243 DDFDF*TTWIGSKG--FSYIFLGLWKWKKCV*QEFFWW*KKQKKSW-NHLVLLEEGGGRR 299
D F + +++ S G + LGL + V SW N + L GGRR
Sbjct: 235 DQFTWSSSFYPSSGLILTATNLGLEQPHASV-----------SSSWDNSVSSLNSNGGRR 283
Query: 300 SR 301
R
Sbjct: 284 GR 285
>gb|AAG51320.1| hypothetical protein; 557-2776 [Arabidopsis thaliana]
gi|15232025|ref|NP_186749.1| expressed protein
[Arabidopsis thaliana]
Length = 488
Score = 125 bits (313), Expect = 3e-27
Identities = 106/302 (35%), Positives = 146/302 (48%), Gaps = 61/302 (20%)
Query: 12 ENLNPNEFSNRTPLQK----SLTKGDNNCVNVV--VVSPQKRIRQRKFVVAKKK-KNDQS 64
EN NPN S+ TPL+K S K N V V SP+ RIR+R+FVV KK + +++
Sbjct: 33 ENSNPNFVSHSTPLEKPSKSSAQKNPKWKPNPVPAVFSPRNRIRERRFVVVKKNSRKEKN 92
Query: 65 PRKTVLCKCGEN--DDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEV 122
+V CKCG + KCVC AY LR SQE FF + E+
Sbjct: 93 DSASVDCKCGAKTISNMKKCVCIAYETLRASQEEFFNNRR--------------ESVSEI 138
Query: 123 IEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMH 182
E++ + D GNE+ + + + S++KRRREKV+EEAR S+PE GKVMH
Sbjct: 139 GESSQNLED-GNEQVEFGDSDETRV---------SLMKRRREKVLEEARMSIPEFGKVMH 188
Query: 183 LVKAFERLLSIKKEKEKNEEEEENDKKNKVMKWALPGLQFQQPVKDGDEQSEVVSSCCDD 242
LVKAFE+L K ++EEE D+ + +KW LPG+ S+ S +
Sbjct: 189 LVKAFEKLTCFPLSKVTSKEEE--DQIKQPLKWELPGM------------SQPKCSESET 234
Query: 243 DDFDF*TTWIGSKG--FSYIFLGLWKWKKCV*QEFFWW*KKQKKSW-NHLVLLEEGGGRR 299
D F + +++ S G + LGL + V SW N + L GGRR
Sbjct: 235 DQFTWSSSFYPSSGLILTATNLGLEQPHASV-----------SSSWDNSVSSLNSNGGRR 283
Query: 300 SR 301
R
Sbjct: 284 GR 285
>emb|CAC01750.1| putative protein [Arabidopsis thaliana] gi|11358122|pir||T51529
hypothetical protein T20K14_120 - Arabidopsis thaliana
Length = 494
Score = 118 bits (295), Expect = 4e-25
Identities = 96/270 (35%), Positives = 132/270 (48%), Gaps = 45/270 (16%)
Query: 12 ENLNPN---EFSNRTPLQKSLTKGDNNCVNV------VVVSPQKRIRQRKFVVAKKKKND 62
EN NPN +++PL KS K + V SP+ RIR+RKFVV KK +
Sbjct: 32 ENANPNISQASPSKSPLMKSAKKSAQKNPSPSPKPTQAVFSPRNRIRERKFVVVAKKNSR 91
Query: 63 QSPRKTVL---------CKCGENDDGS-KCVCEAYRNLRESQEGFFEKENFFDGEEKNDE 112
+ ++ + CKCGE G+ KCVC AY LR SQE FF+ + +
Sbjct: 92 KGKKEPAITESKAAEIDCKCGERKKGNMKCVCVAYETLRASQEEFFKN--------RIES 143
Query: 113 EKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARN 172
E+ + LEE ++GN DE EG E EK S+M KR R KV+EEAR
Sbjct: 144 EEDKEALEECC-------NLGNG----DELEGKESGEPEKTGVSTM-KRSRAKVVEEARQ 191
Query: 173 SVPENGKVMHLVKAFERLLSIKKEKEKNEEEE---ENDKKNKVMKWALPGLQFQQPVKDG 229
SVP +GKVM+LV+AFE+L K N+ EE E D K V L G + + P
Sbjct: 192 SVPVSGKVMNLVEAFEKLTCFSNSKTANKIEENQTEEDTKKPVKLEFLEGEKEKNPWSSS 251
Query: 230 DEQSEVVSSCCD---DDDFDF*TTWIGSKG 256
SE+V + + D + ++W ++G
Sbjct: 252 FCPSEMVLTAKNLGLDPNASISSSWDSTRG 281
>ref|NP_197055.2| expressed protein [Arabidopsis thaliana]
Length = 497
Score = 118 bits (295), Expect = 4e-25
Identities = 96/270 (35%), Positives = 132/270 (48%), Gaps = 45/270 (16%)
Query: 12 ENLNPN---EFSNRTPLQKSLTKGDNNCVNV------VVVSPQKRIRQRKFVVAKKKKND 62
EN NPN +++PL KS K + V SP+ RIR+RKFVV KK +
Sbjct: 32 ENANPNISQASPSKSPLMKSAKKSAQKNPSPSPKPTQAVFSPRNRIRERKFVVVAKKNSR 91
Query: 63 QSPRKTVL---------CKCGENDDGS-KCVCEAYRNLRESQEGFFEKENFFDGEEKNDE 112
+ ++ + CKCGE G+ KCVC AY LR SQE FF+ + +
Sbjct: 92 KGKKEPAITESKAAEIDCKCGERKKGNMKCVCVAYETLRASQEEFFKN--------RIES 143
Query: 113 EKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARN 172
E+ + LEE ++GN DE EG E EK S+M KR R KV+EEAR
Sbjct: 144 EEDKEALEECC-------NLGNG----DELEGKESGEPEKTGVSTM-KRSRAKVVEEARQ 191
Query: 173 SVPENGKVMHLVKAFERLLSIKKEKEKNEEEE---ENDKKNKVMKWALPGLQFQQPVKDG 229
SVP +GKVM+LV+AFE+L K N+ EE E D K V L G + + P
Sbjct: 192 SVPVSGKVMNLVEAFEKLTCFSNSKTANKIEENQTEEDTKKPVKLEFLEGEKEKNPWSSS 251
Query: 230 DEQSEVVSSCCD---DDDFDF*TTWIGSKG 256
SE+V + + D + ++W ++G
Sbjct: 252 FCPSEMVLTAKNLGLDPNASISSSWDSTRG 281
>ref|NP_963719.1| hypothetical protein NEQ435 [Nanoarchaeum equitans Kin4-M]
gi|40068945|gb|AAR39280.1| NEQ435 [Nanoarchaeum equitans
Kin4-M]
Length = 240
Score = 54.3 bits (129), Expect = 7e-06
Identities = 28/103 (27%), Positives = 63/103 (60%)
Query: 107 EEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKV 166
E+K +E +++ E++I+ + I D+ + E KI+E++ +++++ NCSS+++ ++K+
Sbjct: 122 EKKLEELTVDSIFEKIIKNGISITDVLDSEFKIEEKKEIKKKSLPTPNCSSIIEEYKQKI 181
Query: 167 MEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKK 209
++ K+ L++ + ++IK E E+ EE+EE D K
Sbjct: 182 DFLIEENMALRKKISQLLEMQKLTITIKIETERKEEKEEIDIK 224
>emb|CAE66832.1| Hypothetical protein CBG12202 [Caenorhabditis briggsae]
Length = 284
Score = 53.5 bits (127), Expect = 1e-05
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 28/184 (15%)
Query: 45 QKRIRQRKFVVAKKKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFF 104
Q+R+++R+ KKKK + R+ V K + ++ E + ++ E EK++
Sbjct: 25 QRRVKRRRR--RKKKKRRKKNRRRVKKKEEKKEEKK----EEKKEEKKEDEKKDEKKSDM 78
Query: 105 DGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRRE 164
E+K DEEK ++ ++ EE+K DE+E +E+ +EK K +E
Sbjct: 79 KDEDKKDEEKKDDKEKK-------------EEKKEDEKEKEDEKKDEK-------KDEKE 118
Query: 165 KVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMKWALPGL--QF 222
+ +E + ++ K K + KKE+EK EE++E +KK + + G+ +F
Sbjct: 119 EDKKEEKKEEKKDDKEKKEEKKDQEKKEEKKEEEKKEEKKEEEKKEEKKEEPKAGIYYKF 178
Query: 223 QQPV 226
Q P+
Sbjct: 179 QSPL 182
Score = 39.3 bits (90), Expect = 0.25
Identities = 32/147 (21%), Positives = 74/147 (49%), Gaps = 26/147 (17%)
Query: 88 RNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEE 147
R +++ +E EK+ E+K DE+K E ++++ D +EE+K D+E+ E+
Sbjct: 45 RRVKKKEEKKEEKKEEKKEEKKEDEKKDEK------KSDMKDEDKKDEEKKDDKEKKEEK 98
Query: 148 ENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEEND 207
+ +EK + ++ +E ++ E+ K KKE++K+++E++ +
Sbjct: 99 KEDEK--------EKEDEKKDEKKDEKEEDKK------------EEKKEEKKDDKEKKEE 138
Query: 208 KKNKVMKWALPGLQFQQPVKDGDEQSE 234
KK++ K + ++ K+ +++ E
Sbjct: 139 KKDQEKKEEKKEEEKKEEKKEEEKKEE 165
>ref|NP_179030.2| hypothetical protein [Arabidopsis thaliana]
Length = 847
Score = 53.5 bits (127), Expect = 1e-05
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 19/148 (12%)
Query: 92 ESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKI-----DEEEGVE 146
E QE + + +GEE+ EE+G+ EE +E D G E+++I +E EG E
Sbjct: 424 EKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYR---GDEGTEKQEIPKQGDEEMEGEE 480
Query: 147 EENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEEN 206
E+ EE+G K E + +P+ G ++ E+EK EEE +
Sbjct: 481 EKQEEEGKEKEEEKVEYRGDEETEKQEIPKQGDE-----------EMEGEEEKQEEEGKE 529
Query: 207 DKKNKVMKWALPGLQFQQPVKDGDEQSE 234
+++ KV G + Q+ K GDE+ E
Sbjct: 530 EEEEKVEYRGDEGTEKQEIPKQGDEEME 557
Score = 42.4 bits (98), Expect = 0.029
Identities = 38/129 (29%), Positives = 65/129 (49%), Gaps = 21/129 (16%)
Query: 92 ESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKI-----DEEEGVE 146
E QE + + +GEE+ EE+G+ EE +E D G E+++I +E EG E
Sbjct: 504 EKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYR---GDEGTEKQEIPKQGDEEMEGEE 560
Query: 147 EENEEKGNCSSMVKRRREKVMEEARN-----SVPENGKVMHLVKAFERLLSIKKEKEKNE 201
E+ EE+G + EK+ E ++ +V E K + + E + ++E+ K E
Sbjct: 561 EKQEEEGK-----EEEEEKICVEYKDHHSTCNVEETEKQENPKQGDEEM---EREEGKEE 612
Query: 202 EEEENDKKN 210
+ EE+D+ N
Sbjct: 613 KVEEHDEYN 621
Score = 40.8 bits (94), Expect = 0.084
Identities = 40/154 (25%), Positives = 71/154 (45%), Gaps = 23/154 (14%)
Query: 92 ESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKI-----DEEEGVE 146
E QE + + +GEE+ EE+G+ EE +E D E+++I +E EG E
Sbjct: 464 EKQEIPKQGDEEMEGEEEKQEEEGKEKEEEKVEYR---GDEETEKQEIPKQGDEEMEGEE 520
Query: 147 EENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEEN 206
E+ EE+G +E+ E+ E + + K + + ++EK++ E +EE
Sbjct: 521 EKQEEEG---------KEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEGKEEE 571
Query: 207 DKKNKV------MKWALPGLQFQQPVKDGDEQSE 234
++K V + + Q+ K GDE+ E
Sbjct: 572 EEKICVEYKDHHSTCNVEETEKQENPKQGDEEME 605
>gb|EAA17642.1| Drosophila melanogaster CG2972 gene product [Plasmodium yoelii
yoelii]
Length = 491
Score = 53.5 bits (127), Expect = 1e-05
Identities = 48/181 (26%), Positives = 71/181 (38%), Gaps = 24/181 (13%)
Query: 91 RESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNE--ERKIDEEEGVEEE 148
R Q FEK + EE + E EN +E + + D+G E E +++ EE EEE
Sbjct: 140 RNGQPDTFEKRQVGENEENEENEVEENETDEDVREDETDEDVGEEVKENEVEVEEAEEEE 199
Query: 149 NEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDK 208
NE + + E+ EE + V E+ +E + EEE+E D+
Sbjct: 200 NEVEDGEADETDEGVEEEAEEVEDEVGED--------------ETDEEVNEAEEEDETDE 245
Query: 209 KNKVMKWALPGLQFQQPVKDGDEQSEVVSSCCDDDDFDF*TTWIGSKGFSYIFLGLWKWK 268
K L ++ V + DE DDD D W+ F L + K K
Sbjct: 246 GEDKSKRILGVETIKEEVVEVDENK--------DDDDDGGGKWVNVNNFDVFNLNVDKNK 297
Query: 269 K 269
K
Sbjct: 298 K 298
>gb|EAA22410.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 1549
Score = 53.1 bits (126), Expect = 2e-05
Identities = 62/291 (21%), Positives = 113/291 (38%), Gaps = 59/291 (20%)
Query: 6 KKPLEIENLNPNEFSNRTPLQKSLTKGDNNCVNVVVVSPQKRIRQRKFVVAKKKKNDQSP 65
KK + + + ++ K+L++ N +K + K V K +ND S
Sbjct: 265 KKKNRLSSYDSETLKKQSKKNKNLSENSNK-----KEGNKKSVLNNKKNVKGKNENDYST 319
Query: 66 RKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEA 125
E+D K + N++ + E EN EE+ DEE+G EE
Sbjct: 320 --------SEDDTNKKNKNKKSGNVKNKGKTIIENEN----EEEEDEEEGNEEAEE---- 363
Query: 126 NLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVK 185
+E + +EEE E+E EE + RR ++ ++ + N + +VK
Sbjct: 364 ---------DEEEANEEEDEEDEEEESDEGYKRNRLRRSNSVKNKKSGINRNNRNSKIVK 414
Query: 186 AFERLLSIKK----------------EKEKNEEEEENDK---------KNKVMKWALPGL 220
+ + S K + E+NEEEEE ++ N+ K L
Sbjct: 415 KNKNIKSNKDKCVSNNKSGKSKIKNVKNEENEEEEEKEESSYFDEYIYSNEERKAILEEK 474
Query: 221 QFQQPVKDGDEQSEVVSSCCDDDDFDF*TTWIGSKGFSYIFLGLWKWKKCV 271
+ ++ +K+G + ++ DD+ +F I + + + L L +K V
Sbjct: 475 ERKKQIKEGYIKKMKLNKYADDETIEF----INNPNYIMVLLFLTIYKNIV 521
>gb|AAG00554.1| retinitis pigmentosa GTPase regulator-like protein [Takifugu
rubripes]
Length = 791
Score = 53.1 bits (126), Expect = 2e-05
Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 57 KKKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGE 116
K++ N++ T K GE+++ + E + E Q EKE EE N+EE+
Sbjct: 517 KEESNEEEQSSTE--KEGESNEEEQSSTEKEESNEEEQSST-EKE-----EESNEEEQSS 568
Query: 117 NVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPE 176
EE E + + E + +EE+ +EE EE G + E+ +E E
Sbjct: 569 TEKEESNEEEEEEEESESNEEESEEEDQKDEEEEETGEEDEEEEEESEEQNQEEEAEEEE 628
Query: 177 NGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMKWALPGLQFQQPVKDGDEQSEVV 236
+G+ + E + EKE+ +EEEE +K+ + + ++ ++ ++ +E+ E
Sbjct: 629 DGETDVQEEEEEEE---ETEKEEEDEEEETEKEEEDEEEETDRVEEEEDAEENEEEEEEE 685
Query: 237 SSCCDDDDFD 246
S+ +D++ D
Sbjct: 686 SNSEEDEESD 695
Score = 42.4 bits (98), Expect = 0.029
Identities = 41/192 (21%), Positives = 79/192 (40%), Gaps = 28/192 (14%)
Query: 57 KKKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGE 116
K++ N++ T + ++ S E E +E E + E++ DEE+ E
Sbjct: 544 KEESNEEEQSSTEKEEESNEEEQSSTEKEESNEEEEEEEESESNEEESEEEDQKDEEEEE 603
Query: 117 NVLEEVIEANLIIHDIGNEERKIDEEE----GVEEENEEKGNCSSMVKRRREKVMEEARN 172
E+ E + N+E + +EEE V+EE EE+ + E+ +E +
Sbjct: 604 TGEEDEEEEEE--SEEQNQEEEAEEEEDGETDVQEEEEEEEETEKEEEDEEEETEKEEED 661
Query: 173 SVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMKWALPGLQFQQPVKDGDEQ 232
E +V +++ E+NEEEEE + ++ + DG+E+
Sbjct: 662 EEEETDRVEE-----------EEDAEENEEEEEEESNSE-----------EDEESDGEEE 699
Query: 233 SEVVSSCCDDDD 244
+ S +D++
Sbjct: 700 EDEESDSEEDEE 711
Score = 41.2 bits (95), Expect = 0.065
Identities = 40/167 (23%), Positives = 68/167 (39%), Gaps = 25/167 (14%)
Query: 58 KKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKG-- 115
+++ ++S + + E +DG V E E+++ ++E + EE+++EE+
Sbjct: 609 EEEEEESEEQNQEEEAEEEEDGETDVQEEEEEEEETEKEEEDEEEETEKEEEDEEEETDR 668
Query: 116 --------ENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVM 167
EN EE E+N + + E + DEE EE+ EE+ E
Sbjct: 669 VEEEEDAEENEEEEEEESNSEEDEESDGEEEEDEESDSEEDEEEESESEEEEGEESESEE 728
Query: 168 EEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMK 214
EE S E + E+ EEEEE KK + +K
Sbjct: 729 EEGEESESEEE---------------EGEESDREEEEEIKKKKRPVK 760
Score = 38.5 bits (88), Expect = 0.42
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 75 ENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGN 134
E+++GS E + +EG E+ + EE+ D + + E +
Sbjct: 426 ESEEGSDHESERKKASESEEEGEEEEADSLSEEEEGDSKSDAEESDAESETE---GEGAE 482
Query: 135 EERKIDEEEGVEEENE------EKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAF- 187
EE+ E+EG E E E+ N +E+ EE ++S + G+ ++
Sbjct: 483 EEQSSTEKEGESNEEEQSSTEKEESNEEEQSSTEKEESNEEEQSSTEKEGESNEEEQSST 542
Query: 188 -------ERLLSIKKEKEKNEEEEENDKKNK 211
E S +KE+E NEEE+ + +K +
Sbjct: 543 EKEESNEEEQSSTEKEEESNEEEQSSTEKEE 573
Score = 38.1 bits (87), Expect = 0.55
Identities = 31/117 (26%), Positives = 53/117 (44%), Gaps = 15/117 (12%)
Query: 92 ESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEE 151
E ++ EKE + EE++ EK E+ EE E+ + +EEE E E
Sbjct: 482 EEEQSSTEKEGESNEEEQSSTEKEESNEEE---------QSSTEKEESNEEEQSSTEKEG 532
Query: 152 KGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDK 208
+ N +E+ EE ++S + + + E S +++E NEEEEE ++
Sbjct: 533 ESNEEEQSSTEKEESNEEEQSSTEKEEE------SNEEEQSSTEKEESNEEEEEEEE 583
Score = 35.8 bits (81), Expect = 2.7
Identities = 35/147 (23%), Positives = 61/147 (40%), Gaps = 13/147 (8%)
Query: 74 GENDDGSKCVCEAYRNLRESQEGFFEKE-------NFFDGEEKNDEEKG----ENVLEEV 122
GE + + E E ++ EKE + + EE N+EE+ E E
Sbjct: 478 GEGAEEEQSSTEKEGESNEEEQSSTEKEESNEEEQSSTEKEESNEEEQSSTEKEGESNEE 537
Query: 123 IEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMH 182
+++ + EE+ E+E EE NEE+ + + + E+ EE S E +
Sbjct: 538 EQSSTEKEESNEEEQSSTEKE--EESNEEEQSSTEKEESNEEEEEEEESESNEEESEEED 595
Query: 183 LVKAFERLLSIKKEKEKNEEEEENDKK 209
E + E+E+ E EE+N ++
Sbjct: 596 QKDEEEEETGEEDEEEEEESEEQNQEE 622
Score = 35.0 bits (79), Expect = 4.6
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 92 ESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEE 151
E +E E++ DGEE+ DEE EE EE + +EEEG E E+EE
Sbjct: 682 EEEESNSEEDEESDGEEEEDEESDSEEDEE-------------EESESEEEEGEESESEE 728
Query: 152 -KGNCSSMVKRRREKVMEEARNSVPENGKVMHL 183
+G S + E+ E + + + + L
Sbjct: 729 EEGEESESEEEEGEESDREEEEEIKKKKRPVKL 761
Score = 35.0 bits (79), Expect = 4.6
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 85 EAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEG 144
E N+ +S + ++E D + + E++ ++ +E+ E G + EEE
Sbjct: 334 EEEENVTQSSDKASDEEKEGDSDTLHPEDESQSDVEDEEE--------GESRSEGQEEEE 385
Query: 145 VEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEE 204
EEE EE+ + ++ + EK E V E + ++ E + K+ +E EE
Sbjct: 386 EEEEEEEERSSTAESESEDEKKGERKERDVEEEEGESEVEESEEGSDHESERKKASESEE 445
Query: 205 ENDKK 209
E +++
Sbjct: 446 EGEEE 450
Score = 34.7 bits (78), Expect = 6.0
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 23/147 (15%)
Query: 85 EAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIG-NEERKIDEEE 143
E+ ++ + +EG E EE+ +EE+ E E+ G +ER ++EEE
Sbjct: 363 ESQSDVEDEEEGESRSEG---QEEEEEEEEEEEERSSTAESESEDEKKGERKERDVEEEE 419
Query: 144 GVEE-ENEEKGNCSSMVKRRREKVMEEARN------SVPENGKVMHLVK----------- 185
G E E E+G+ +++ + EE S E G +
Sbjct: 420 GESEVEESEEGSDHESERKKASESEEEGEEEEADSLSEEEEGDSKSDAEESDAESETEGE 479
Query: 186 -AFERLLSIKKEKEKNEEEEENDKKNK 211
A E S +KE E NEEE+ + +K +
Sbjct: 480 GAEEEQSSTEKEGESNEEEQSSTEKEE 506
>ref|XP_603554.1| PREDICTED: similar to hypothetical protein FLJ36144, partial [Bos
taurus]
Length = 1369
Score = 52.8 bits (125), Expect = 2e-05
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 42/222 (18%)
Query: 4 EKKKPLEIENLNPNEFSNRTPLQKSLTKGDNNCVNVVVVSPQKRIRQRKFVVAKKKKNDQ 63
EKK L E L + +KSLT+ + +K++ Q K + KK K +
Sbjct: 610 EKKVSLSEEELEESLAGKHR--KKSLTQ---------IRKKEKKLTQEKEKLDKKVK--E 656
Query: 64 SPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVI 123
P + + + + G+ ++ E +E F E+E EE EE+ E++ EE
Sbjct: 657 GPHEEEMEPFSKEEGGAP-------HMEEEEEDFSEEEESRSEEESLSEEE-ESLSEE-- 706
Query: 124 EANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARN-SVPENG---- 178
+G EE + EEE + EE E S+ ++ E + EE + S E G
Sbjct: 707 ------ESLGEEEESLSEEESLSEEEESLREEESLSEKEEEGLSEEEESLSEEEEGLSEK 760
Query: 179 ------KVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMK 214
K HL K + L +KEK +E+EEE +K K K
Sbjct: 761 EKSLSEKEKHLSKKEKAL--HEKEKSLSEKEEEEEKMEKTEK 800
Score = 37.0 bits (84), Expect = 1.2
Identities = 42/191 (21%), Positives = 80/191 (40%), Gaps = 21/191 (10%)
Query: 45 QKRIRQRKFVVAKKKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFF-EKENF 103
+K+I++++ + K +K DQ R+ K E D K + + L + +E F EKE
Sbjct: 268 KKQIQEKEKQIEKPEKVDQKERQA---KEKEEDAKDKQLARERQKLSQKEEEMFGEKEKL 324
Query: 104 FDGEEKNDEEKGENVLEEVIEANLIIH--------------DIGN--EERKIDEEEGVEE 147
E K +++ ++ A + D+G E R++++ EE
Sbjct: 325 SQQEVKQIQKRASKAWKKEGGAQKVQKITKKKRRQISGKKVDLGEKGEAREMEKLSLKEE 384
Query: 148 ENEEKGNCSSMVKRR-REKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEEN 206
++G K + K EE V K++ K+ E++ + ++EK E+E
Sbjct: 385 RQAQEGKRQDQKKEKLTPKAAEEKTQLVRGKMKLVSKEKSREKIEKVSPKEEKWVMEKEK 444
Query: 207 DKKNKVMKWAL 217
+ +WAL
Sbjct: 445 KISKEKKQWAL 455
Score = 35.0 bits (79), Expect = 4.6
Identities = 42/205 (20%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 4 EKKKPLEIENLNPNEFSNRTPLQKSLTKGDNNCVNVV--VVSPQKRIRQRKFVVAKKKKN 61
+K+K E E ++P T ++ L +G+ ++ KR+ + V +++
Sbjct: 36 QKEKRAEEEEISPISQKKLTKAEQKLVQGEKKGTGKEEELLGKGKRVNWERGKVTPRQRT 95
Query: 62 DQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEE 121
+ TV K G ++ L E +E ++E E++ ++ E + EE
Sbjct: 96 WYWEKVTVDHKEGRQEE-----------LMEEEEVLSKEEEELSEEDEELRKELEVLGEE 144
Query: 122 VIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKV- 180
+ + + ++ E ++ EEE E +EK ++++ EK+M+ R + G++
Sbjct: 145 LEKMIAALGELNEELEELGEEE--EVLAQEKEEIIQNLEKQIEKMMKNYRKIKKQMGEME 202
Query: 181 -MHLVKAFERLLSIKKEKEKNEEEE 204
+A+ER ++E+ ++EEE
Sbjct: 203 KHDEEEAWEREKLAQEEEHLSKEEE 227
>ref|XP_229199.3| PREDICTED: similar to HIV TAT specific factor 1 [Rattus norvegicus]
Length = 825
Score = 52.0 bits (123), Expect = 4e-05
Identities = 48/202 (23%), Positives = 91/202 (44%), Gaps = 25/202 (12%)
Query: 43 SPQKRIRQRKFVVAKKKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKEN 102
+P+K ++ KKK + K L K E++D ++ +ES+E E+E+
Sbjct: 555 NPKKESQENGPERESKKKXKEXYEKNGLAKESEDNDLNRESEGEDSPKKESEEDDSERES 614
Query: 103 FFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRR 162
EE + E++ EN ++ +E N + D + + E VE+E+EE S
Sbjct: 615 ----EEDSSEKQSENGSDKELEENGVKKDFDQDASDKEFPENVEKESEENETDKSEFDEG 670
Query: 163 REKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMKWALPGLQF 222
E+V+ E + ER +++ ++ EEEE++D++ +V+ + F
Sbjct: 671 SERVLGE---------------EGSER--EFEEDSDEKEEEEDDDEEKEVVYERV----F 709
Query: 223 QQPVKDGDEQSEVVSSCCDDDD 244
+ D +E+ E C+D D
Sbjct: 710 EDDSDDFEEEEEAYEKECEDAD 731
>ref|NP_214394.1| initiation factor IF-2 [Aquifex aeolicus VF5]
gi|2984268|gb|AAC07794.1| initiation factor IF-2
[Aquifex aeolicus VF5] gi|7443418|pir||E70474
translation initiation factor IF-2 - Aquifex aeolicus
gi|3913894|sp|O67825|IF2_AQUAE Translation initiation
factor IF-2
Length = 805
Score = 52.0 bits (123), Expect = 4e-05
Identities = 39/112 (34%), Positives = 60/112 (52%), Gaps = 8/112 (7%)
Query: 107 EEKNDEEKGENVL-EEVIE---ANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRR 162
EEK +EEK E V+ EEV+E +I+ +I EE+K EEE +EE + K + ++K
Sbjct: 80 EEKKEEEKKEEVIVEEVVEEKKPEVIVEEI--EEKK--EEEEKKEEEKPKKSVEELIKEI 135
Query: 163 REKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMK 214
EK +E E + V+ E +KE++K E++EE K K+ K
Sbjct: 136 LEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMSK 187
Score = 47.4 bits (111), Expect = 0.001
Identities = 29/113 (25%), Positives = 60/113 (52%), Gaps = 2/113 (1%)
Query: 99 EKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSM 158
E E + EEK +EEK + +EE+I+ L + E++K+++E E+ +
Sbjct: 108 EIEEKKEEEEKKEEEKPKKSVEELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEER 167
Query: 159 VKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNK 211
+ ++E+ EE + + + K +++ E +++KEK+K E+ E+ KK +
Sbjct: 168 KEEKKEEKKEEEKPKIKMSKKEREIMRKLEH--AVEKEKKKQEKREKEKKKKE 218
Score = 40.4 bits (93), Expect = 0.11
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 101 ENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVK 160
E +D +EE+ E V+ E +A + + EE+K EE + EE E+ +V+
Sbjct: 51 EMIYDAFGIKEEEEKEEVVTEQAQAPAEVEEKKEEEKK---EEVIVEEVVEEKKPEVIVE 107
Query: 161 RRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMK 214
EK EE + E K V+ + + KKEKEK +++ E ++K + ++
Sbjct: 108 EIEEKKEEEEKK---EEEKPKKSVEELIKEILEKKEKEKEKKKVEKERKEEKVR 158
>ref|XP_647328.1| hypothetical protein DDB0189564 [Dictyostelium discoideum]
gi|60475423|gb|EAL73358.1| hypothetical protein
DDB0189564 [Dictyostelium discoideum]
Length = 770
Score = 52.0 bits (123), Expect = 4e-05
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 5 KKKPLEIENLNPNEFSNRTPLQKSLTKGDNNCVNVVVVSPQKRIRQRKFVVAKKKKNDQS 64
K+ P E+E+ N+ S + + + + N ++ S QK+ +RK +K+K
Sbjct: 270 KRPPQELES-KKNQTSPKNSIDITTFNLETNVIDKNDQSGQKKSDKRKEKEIEKEK---- 324
Query: 65 PRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIE 124
E + G E + + +E EKE + E + + E+ E E IE
Sbjct: 325 ----------EREKGIGIEREREKEKEKEKEKEKEKEKERERERERERER-EREREREIE 373
Query: 125 ANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLV 184
+ +ER+I+ E +E E E + +R REKV E+ R E K
Sbjct: 374 REIEKEKEREKEREIEIE--IEREREREIEREKEKEREREKVKEKEREKEREKEKEKEKE 431
Query: 185 KAFERLLSIKKEKEKNEEEEENDKKNK 211
K E+ +KEKEK +E+ + KK K
Sbjct: 432 KEKEKEKEKEKEKEKEKEKGKEKKKGK 458
Score = 35.4 bits (80), Expect = 3.5
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 101 ENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNE-ERKIDEEEGVEEENEEKGNCSSMV 159
+N G++K+D+ K + + +E IG E ER+ ++E+ E+E E++
Sbjct: 303 KNDQSGQKKSDKRKEKEIEKEKEREK----GIGIEREREKEKEKEKEKEKEKEKERERER 358
Query: 160 KRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEK--NEEEEENDKKNKVMKWAL 217
+R RE+ E R E K K E + I++E+E+ E+E+ ++ KV +
Sbjct: 359 EREREREREREREIEREIEKEKEREKEREIEIEIEREREREIEREKEKEREREKVKEKER 418
Query: 218 PGLQFQQPVKDGDEQSE 234
+ ++ K+ +++ E
Sbjct: 419 EKEREKEKEKEKEKEKE 435
>ref|XP_646210.1| hypothetical protein DDB0216685 [Dictyostelium discoideum]
gi|60474873|gb|EAL72810.1| hypothetical protein
DDB0216685 [Dictyostelium discoideum]
Length = 1112
Score = 52.0 bits (123), Expect = 4e-05
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 75 ENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGN 134
E D G+ V + N E +E K+ + EE+ +EE+ E EE E
Sbjct: 597 EMDIGNDNVEDDRENEEEEKEEDKNKKEVSEEEEEEEEEEKEEEKEEEEEKE-------- 648
Query: 135 EERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKA-FERLLSI 193
EE++++EEE +EE +E ++++ E E S E+G + K+ F++L I
Sbjct: 649 EEKEVEEEEEEKEEEKEVQEGEEHIEQKEESESESKSESESESGTELGEKKSFFKKLNEI 708
Query: 194 KKE---KEKNEEEEENDKK--------NKVMKWALPGLQFQQPVKDGDEQSE 234
+ E E N EE+E DK NKV K + +D DE+ E
Sbjct: 709 QDEDEAMEDNREEDEIDKSDDGEDIDFNKVKKKHKNDSDEEDEEEDEDEEEE 760
Score = 42.0 bits (97), Expect = 0.038
Identities = 37/125 (29%), Positives = 59/125 (46%), Gaps = 9/125 (7%)
Query: 87 YRNLRESQEGFFEKENFFDGEEKNDEEKGENV-LEEVIEANLIIHDIGNEERKIDEEEGV 145
++ L E Q+ E+ + +E + + GE++ +V + + D +EE DEEE
Sbjct: 702 FKKLNEIQDEDEAMEDNREEDEIDKSDDGEDIDFNKVKKKHKNDSDEEDEEEDEDEEEEE 761
Query: 146 EEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIK---KEKEKNEE 202
EEE EE+ K+ E++ E + + HL K +LL K K E +EE
Sbjct: 762 EEEEEEEEEDIETTKKNAERLREIFQQDDDD-----HLRKIKSKLLKRKNYDKYDENSEE 816
Query: 203 EEEND 207
EEE D
Sbjct: 817 EEEED 821
Score = 38.1 bits (87), Expect = 0.55
Identities = 36/151 (23%), Positives = 60/151 (38%), Gaps = 22/151 (14%)
Query: 101 ENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVK 160
+N D E +EEK E+ ++ + EE + ++EE EEE E
Sbjct: 603 DNVEDDRENEEEEKEEDKNKKEVSEE------EEEEEEEEKEEEKEEEEE---------- 646
Query: 161 RRREKVMEEARNSVPENGKVM----HLVKAFERLLSIKKEKEKNEEEEENDKKNKVMKWA 216
+ EK +EE E +V H+ + E K E E E +KK+ K
Sbjct: 647 KEEEKEVEEEEEEKEEEKEVQEGEEHIEQKEESESESKSESESESGTELGEKKSFFKK-- 704
Query: 217 LPGLQFQQPVKDGDEQSEVVSSCCDDDDFDF 247
L +Q + + + + + + D +D DF
Sbjct: 705 LNEIQDEDEAMEDNREEDEIDKSDDGEDIDF 735
Score = 35.4 bits (80), Expect = 3.5
Identities = 58/252 (23%), Positives = 93/252 (36%), Gaps = 62/252 (24%)
Query: 6 KKPLEIENLNPNEFSNRT--PLQKSLTKGDNNCVNVVVVSPQKRIRQRKFVVAKKKKNDQ 63
KK +N N + +N++ P + K N VVSP + K KK+
Sbjct: 26 KKSNNNDNNNHSNVNNKSKSPSSSNKLKSPNK-----VVSPSNKKSPNKVTSPSNKKSLS 80
Query: 64 SPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVI 123
+ ++ K E L E QE K+ + +EK +EE+
Sbjct: 81 IKKNKIIEKEKEE-------------LEEEQEEKEHKQEVEEQDEKKEEEE--------- 118
Query: 124 EANLIIHDIGNEERKIDEEEGVEEENEE---------KGNCSSMVKRRREKVM------- 167
EE + +EEE EEE+EE + N K+ +KV
Sbjct: 119 ----------EEEEEEEEEEEEEEEDEEEEEIVTFSKQTNIDLEFKKASKKVAQLVNKVK 168
Query: 168 ----EEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMKWALPGLQFQ 223
E R S+ + + K E K+EKE+ EE+E K K ++ L+ Q
Sbjct: 169 RDEEERQRLSLQPSDDDDDIEKDDENQQKEKEEKEEKEEDENVSFKPKRLQKNKKNLKLQ 228
Query: 224 QPVKDGDEQSEV 235
+ D+Q ++
Sbjct: 229 SFI---DKQKQI 237
Score = 34.3 bits (77), Expect = 7.9
Identities = 50/275 (18%), Positives = 108/275 (39%), Gaps = 40/275 (14%)
Query: 4 EKKKPLEIENLNPNEFSNRTPLQKSLTKGDNNCVNVVVVSPQKRIRQRKFVVAKKKKNDQ 63
E KK + N N N +N + +NN + FV+ +
Sbjct: 459 ESKKSKKRNNNNNNNNNNNNNNNNNNNNNNNNEEDDDEKDADASFENETFVLIDNFDKNG 518
Query: 64 SPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVI 123
+P + K +N + E+ +L Q+ ++E+ D E +++++ +++ + I
Sbjct: 519 NP----IPKSKKNKKPFQLPYESTLDLENDQQQHDDQEDDKDNNEDDEDDEDDDINNKKI 574
Query: 124 EANLIIH-----------------DIGNEERKIDEEEGVEEENEEKGNCSSMVK------ 160
+ + DIGN+ + D+ E EEE EE N + +
Sbjct: 575 NTDQMNKHKFVKPQLKIRVSDEEMDIGNDNVE-DDRENEEEEKEEDKNKKEVSEEEEEEE 633
Query: 161 ---RRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMKWAL 217
+ EK EE + E +V + E +++ +E E++EE++ ++K +
Sbjct: 634 EEEKEEEKEEEEEKE---EEKEVEEEEEEKEEEKEVQEGEEHIEQKEESESESKSESESE 690
Query: 218 PGLQ------FQQPVKDGDEQSEVVSSCCDDDDFD 246
G + F + + + ++ E + ++D+ D
Sbjct: 691 SGTELGEKKSFFKKLNEIQDEDEAMEDNREEDEID 725
>ref|XP_638971.1| hypothetical protein DDB0185634 [Dictyostelium discoideum]
gi|60467594|gb|EAL65615.1| hypothetical protein
DDB0185634 [Dictyostelium discoideum]
Length = 853
Score = 52.0 bits (123), Expect = 4e-05
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 4 EKKKPLEIENLNPNEFSNRTPLQKSLTKGDNNCVNVVVVSPQKRIRQRKFVVAKKKKNDQ 63
EK++ +E E + E QK D +K RK + KN +
Sbjct: 57 EKEENVEEEEQDQEEEEEGNKKQKEENDADKKS--------RKHDEHRK---KRDSKNRR 105
Query: 64 SPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVI 123
S K+ + GE DD + R RE ++ KE + EE++DE + +NV E+
Sbjct: 106 SHSKSDENEEGEEDDEERRKKRRRRKHREKRKKNGNKEEE-EEEEQDDEHEDQNVEEDEE 164
Query: 124 EANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHL 183
+ N+ ++ DEEE EE+ EE+ +K+R +K RNS+ K
Sbjct: 165 DVNVEKQKQQQQQSDFDEEEKEEEKEEEEEEEQIEIKKRSKK-----RNSIDSGRK---- 215
Query: 184 VKAFERLLSIKKEKEKNEEEEEND 207
++ S KK++ +N++++++D
Sbjct: 216 -DKSKKRKSKKKKRGQNDDDDDDD 238
Score = 34.3 bits (77), Expect = 7.9
Identities = 28/104 (26%), Positives = 48/104 (45%), Gaps = 33/104 (31%)
Query: 108 EKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVM 167
+K EK + EE+IE + +I E +G +++N++KG S K ++EK
Sbjct: 10 KKKTVEKSPPIEEEIIEEPV---------DEIVESDGDDKKNKKKGKRKSSKKSKKEK-- 58
Query: 168 EEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNK 211
EE ++++E++ EEEEE +KK K
Sbjct: 59 EE----------------------NVEEEEQDQEEEEEGNKKQK 80
Score = 34.3 bits (77), Expect = 7.9
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 51 RKFVVAKKKKNDQSP---RKTVLCKCGE--NDDGSKCVCEAYRNLRESQEGFFEKENFFD 105
RK V KKK ++SP + + E DG + + S++ EKE +
Sbjct: 4 RKKAVTKKKTVEKSPPIEEEIIEEPVDEIVESDGDDKKNKKKGKRKSSKKSKKEKEENVE 63
Query: 106 GEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREK 165
EE++ EE+ E ++ E +D + RK DE + + + S E+
Sbjct: 64 EEEQDQEEEEEGNKKQKEE-----NDADKKSRKHDEHRKKRDSKNRRSHSKSDENEEGEE 118
Query: 166 VMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKN 210
EE R K R K++K N+EEEE ++++
Sbjct: 119 DDEERRK------------KRRRRKHREKRKKNGNKEEEEEEEQD 151
>emb|CAA04133.1| cyclic nucleotide-gated channel beta subunit [Rattus norvegicus]
gi|13929148|ref|NP_113997.1| cyclic nucleotide gated
channel beta 1 [Rattus norvegicus]
Length = 1339
Score = 51.6 bits (122), Expect = 5e-05
Identities = 50/201 (24%), Positives = 89/201 (43%), Gaps = 32/201 (15%)
Query: 45 QKRIRQRKFVVAKKKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFF 104
+++ + K KKK+ ++ ++ + GE ++ + + +E +EG EKE
Sbjct: 394 EEKEEEEKREEEKKKEKEEEKKEKEEEENGEEEEKEE------KEEKEEEEGKEEKEEKE 447
Query: 105 DGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEK----GNCSSMVK 160
+ EEK +EEK E EE EE++ +EEE EEE EE +C +
Sbjct: 448 EKEEKEEEEKEEKEEEE------------KEEKEEEEEEEEEEEEEEPIVLLDSCLVVQA 495
Query: 161 RRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEK-------NEEEEENDKKNKVM 213
+ +E A+ PE + L + E KKE+E+ EEEEE +++ +
Sbjct: 496 DVDQCQLERAQ---PETASIQELPEEEEEKEEEKKEEEEEKEEEEEKEEEEEKEEEGEAT 552
Query: 214 KWALPGLQFQQPVKDGDEQSE 234
+P + ++ D +E
Sbjct: 553 NSTVPATKEHPELQVEDTDAE 573
Score = 48.9 bits (115), Expect = 3e-04
Identities = 43/135 (31%), Positives = 59/135 (42%), Gaps = 24/135 (17%)
Query: 77 DDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEE 136
+D S+ + E R L + QE E+ + EE+ EEK E EE E E+
Sbjct: 350 EDESEAMVEMPRELPQIQEQQEEENEEKEEEEEEKEEKEEKEEEEEKEEE---EKREEEK 406
Query: 137 RKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKE 196
+K EEE E+E EE G E+ EE E GK K+E
Sbjct: 407 KKEKEEEKKEKEEEENGE---------EEEKEEKEEKEEEEGK------------EEKEE 445
Query: 197 KEKNEEEEENDKKNK 211
KE+ EE+EE +K+ K
Sbjct: 446 KEEKEEKEEEEKEEK 460
Score = 42.0 bits (97), Expect = 0.038
Identities = 41/180 (22%), Positives = 78/180 (42%), Gaps = 12/180 (6%)
Query: 44 PQKRIRQRKFVVAKKKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENF 103
PQ + +Q + K+++ ++ K + E ++ K E + E ++ E+EN
Sbjct: 364 PQIQEQQEEENEEKEEEEEEKEEKEEKEEEEEKEEEEKREEEKKKEKEEEKKEKEEEENG 423
Query: 104 FDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGN--------- 154
+ E++ EEK E +E E + EE++ EEE EE+ EE+
Sbjct: 424 EEEEKEEKEEKEEEEGKEEKEEKEEKEEKEEEEKEEKEEEEKEEKEEEEEEEEEEEEEEP 483
Query: 155 ---CSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNK 211
S + + + + + PE + L + E KKE+E+ +EEEE ++ +
Sbjct: 484 IVLLDSCLVVQADVDQCQLERAQPETASIQELPEEEEEKEEEKKEEEEEKEEEEEKEEEE 543
Score = 39.3 bits (90), Expect = 0.25
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 142 EEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNE 201
+E EEENEEK + + EK EE + + + K E KKEKE+ E
Sbjct: 367 QEQQEEENEEKEEEEEEKEEKEEKEEEEEKEEEEKREEEKKKEKEEE-----KKEKEEEE 421
Query: 202 EEEENDKKNKVMKWALPGLQFQQPVKDGDEQSE 234
EE +K+ K K G + ++ ++ +E+ E
Sbjct: 422 NGEEEEKEEKEEKEEEEGKEEKEEKEEKEEKEE 454
Score = 37.4 bits (85), Expect = 0.93
Identities = 44/185 (23%), Positives = 75/185 (39%), Gaps = 22/185 (11%)
Query: 75 ENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGN 134
E ++ K E + +E +E EKE EE+ +EK E E+ E N +
Sbjct: 371 EEENEEKEEEEEEKEEKEEKEEEEEKEEEEKREEEKKKEKEEEKKEKEEEENGEEEEKEE 430
Query: 135 EERKIDEEEGVE-----EENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFER 189
+E K +EEEG E EE EEK K EK +E E + + +
Sbjct: 431 KEEK-EEEEGKEEKEEKEEKEEKEEEEKEEKEEEEKEEKEEEEEEEEEEEEEEPIVLLDS 489
Query: 190 LLSIKKE----------------KEKNEEEEENDKKNKVMKWALPGLQFQQPVKDGDEQS 233
L ++ + +E EEEEE +++ K + + ++ ++ +E+
Sbjct: 490 CLVVQADVDQCQLERAQPETASIQELPEEEEEKEEEKKEEEEEKEEEEEKEEEEEKEEEG 549
Query: 234 EVVSS 238
E +S
Sbjct: 550 EATNS 554
>ref|XP_640002.1| hypothetical protein DDB0186328 [Dictyostelium discoideum]
gi|60466929|gb|EAL64973.1| hypothetical protein
DDB0186328 [Dictyostelium discoideum]
Length = 1161
Score = 51.6 bits (122), Expect = 5e-05
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 7 KPLEIENLNPNEFSNRTPLQKSLTKGD--NNCVNVVVVSPQKRIRQRKFVVAKKKKNDQS 64
KP + L + S P+Q+SL D N C +++ + + + + + K KK S
Sbjct: 371 KPAAVTPLRFEKISKFCPIQESLLIKDLINICESMIHLKVKPKGFYQNIIFKKLKKKGDS 430
Query: 65 PRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIE 124
K+ ++ S+ E+ E E E+ + E +N++EK E
Sbjct: 431 KSKSK----NDSSSDSESESESGSESESESESESESESESESESENEKEKKE-------- 478
Query: 125 ANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLV 184
+E+K ++ E++ + SS +R +E+ E+ N
Sbjct: 479 ---------KKEKKDNDSSSSNSESDSSESDSSESEREKEEKEEKKDNHDNSESDSSESE 529
Query: 185 KAFERLLSIKKEKEKNEEEEENDKKN 210
FER K++KEK E++E+ +KK+
Sbjct: 530 SEFERKKEKKEKKEKKEKKEKKEKKD 555
>ref|XP_652301.1| conserved hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56469132|gb|EAL46915.1| conserved hypothetical
protein [Entamoeba histolytica HM-1:IMSS]
Length = 512
Score = 51.2 bits (121), Expect = 6e-05
Identities = 38/160 (23%), Positives = 79/160 (48%), Gaps = 12/160 (7%)
Query: 57 KKKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGE 116
+KK+ ++ RK + E ++ + E R +E +E E+ + EE+ +E+ E
Sbjct: 163 RKKREEEERRKEEEERRKEEEERRQQQEEEERRQQEEEE---ERRRQEEEEERKRQEEEE 219
Query: 117 NVLEEVIEANLIIHD--IGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSV 174
++ E + H+ I E+KI E+E EE ++K ++ + K+ E+ R +
Sbjct: 220 ERKKQEQERKIQEHERKIQEHEKKIQEQE--EERKKQKEEQDRKIQEQERKIQEQERKTT 277
Query: 175 PENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMK 214
+ K+ + ++ +E+E+N+++EE DKK + K
Sbjct: 278 EQEKKIQEQERKIKQ-----QEEERNKQKEEQDKKIQEQK 312
Score = 36.2 bits (82), Expect = 2.1
Identities = 27/114 (23%), Positives = 53/114 (45%), Gaps = 13/114 (11%)
Query: 97 FFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCS 156
+ E++ + E + +EE+ EE +++ +EE +EE EE+
Sbjct: 160 YLERKKREEEERRKEEEERRKEEEE------------RRQQQEEEERRQQEEEEERRRQE 207
Query: 157 SMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSI-KKEKEKNEEEEENDKK 209
+R+R++ EE + E H K E I ++E+E+ +++EE D+K
Sbjct: 208 EEEERKRQEEEEERKKQEQERKIQEHERKIQEHEKKIQEQEEERKKQKEEQDRK 261
>ref|XP_641991.1| hypothetical protein DDB0206221 [Dictyostelium discoideum]
gi|60470033|gb|EAL68014.1| hypothetical protein
DDB0206221 [Dictyostelium discoideum]
Length = 905
Score = 51.2 bits (121), Expect = 6e-05
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 48/227 (21%)
Query: 4 EKKKPLEIENLNPNEFSNRTPLQKSLTKGDNNCVNVVVVSPQK----RIRQRKFVVAKKK 59
E+ K E++ L E R QK L + D + + ++ R+ + + V+ K K
Sbjct: 405 EQIKEKEMKRL---EKEKRLEHQKELERLDRERIRAERLEKERLEAERLEKERLVIKKLK 461
Query: 60 KNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVL 119
K + + E ++L++ Q+ E+E + EE+ +EE ++ +
Sbjct: 462 KEKEIQLEN----------------ERLQSLKQKQKQEEEEEEEEEEEEEGEEEDDDDEI 505
Query: 120 EEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSV--PEN 177
EE E EE+K + EEG EEE EE+ +K+ E+ EE +S+ P+N
Sbjct: 506 EEEEE----------EEQKSNVEEGEEEEEEEEEEDDDEIKQEEEEEEEEEEDSIITPKN 555
Query: 178 GKVM--HLVKAFERL-----------LSIKKEKEKNEEEEENDKKNK 211
++ + E L S +++EEEE+ D K K
Sbjct: 556 SSIIKEEVTSDIEELETDTSFQYSSANSSMMTADQDEEEEDKDDKKK 602
Score = 34.3 bits (77), Expect = 7.9
Identities = 25/91 (27%), Positives = 42/91 (45%), Gaps = 13/91 (14%)
Query: 134 NEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLS- 192
N+E KI EE E +K N SSM ++ M+E S N + +K LL+
Sbjct: 13 NKEIKIIEERSKENVITDKENMSSMTPGSKKNCMKEYLKSSLLNDNKNNPLKENNNLLNQ 72
Query: 193 ------------IKKEKEKNEEEEENDKKNK 211
IKK+K++ +++++ K+ K
Sbjct: 73 LNNATNNNNNNEIKKQKQQQQQQQQQQKQQK 103
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.339 0.149 0.490
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 732,884,295
Number of Sequences: 2540612
Number of extensions: 32062027
Number of successful extensions: 340776
Number of sequences better than 10.0: 2999
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 2941
Number of HSP's that attempted gapping in prelim test: 288001
Number of HSP's gapped (non-prelim): 17020
length of query: 439
length of database: 863,360,394
effective HSP length: 131
effective length of query: 308
effective length of database: 530,540,222
effective search space: 163406388376
effective search space used: 163406388376
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 77 (34.3 bits)
Medicago: description of AC149305.8