BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149305.10 + phase: 0 /pseudo
(55 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB58398.1| UDP-glucose dehydrogenase [Glycine max] gi|613611... 81 6e-15
emb|CAC01748.1| UDP-glucose dehydrogenase-like protein [Arabidop... 73 2e-12
gb|AAM47595.1| putative UDP-glucose dehydrogenase [Sorghum bicolor] 72 4e-12
gb|AAR84297.1| UDP-glucose dehydrogenase [Cinnamomum osmophloeum] 72 4e-12
gb|AAP21188.1| At5g39320 [Arabidopsis thaliana] 72 5e-12
ref|NP_198748.1| UDP-glucose 6-dehydrogenase, putative [Arabidop... 72 5e-12
gb|AAO62313.1| UDP-glucose dehydrogenase [Colocasia esculenta] 71 9e-12
gb|AAK16194.1| putative UDP-glucose dehydrogenase [Oryza sativa ... 70 1e-11
gb|AAT40106.1| putative UDP-glucose dehydrogenase 2 [Nicotiana t... 70 1e-11
gb|AAT40105.1| putative UDP-glucose dehydrogenase 1 [Nicotiana t... 70 1e-11
gb|AAM67208.1| UDP-glucose dehydrogenase, putative [Arabidopsis ... 69 3e-11
dbj|BAB02581.1| UDP-glucose dehydrogenase [Arabidopsis thaliana]... 69 3e-11
gb|AAL11570.1| AT3g29360/MUO10_6 [Arabidopsis thaliana] 69 3e-11
gb|AAN28861.1| At1g26570/T1K7_6 [Arabidopsis thaliana] gi|179795... 68 6e-11
gb|AAM61009.1| UDP-glucose dehydrogenase, putative [Arabidopsis ... 68 6e-11
gb|AAR32717.1| UDP-glucose dehydrogenase [Populus tomentosa] 66 3e-10
gb|AAF04455.1| UDP-glucose dehydrogenase [Populus tremula x Popu... 66 3e-10
gb|AAT78767.1| putative UDP-glucose dehydrogenase [Oryza sativa ... 65 4e-10
ref|XP_468764.1| UDP-glucose dehydrogenase [Oryza sativa (japoni... 65 5e-10
ref|XP_396801.2| PREDICTED: similar to CG10072-PA [Apis mellifera] 63 2e-09
>gb|AAB58398.1| UDP-glucose dehydrogenase [Glycine max]
gi|6136119|sp|Q96558|UGDH_SOYBN UDP-glucose
6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH)
(UDPGDH) gi|7431381|pir||T08818 probable UDPglucose
6-dehydrogenase (EC 1.1.1.22) - soybean
Length = 480
Score = 81.3 bits (199), Expect = 6e-15
Identities = 38/55 (69%), Positives = 45/55 (81%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK S +V VVDI+KSRI AW +DQ+PIY+PG DG+VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPSIEVAVVDISKSRIAAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTD 71
>emb|CAC01748.1| UDP-glucose dehydrogenase-like protein [Arabidopsis thaliana]
gi|15810323|gb|AAL07049.1| putative UDP-glucose
dehydrogenase [Arabidopsis thaliana]
gi|53749198|gb|AAU90084.1| At5g15490 [Arabidopsis
thaliana] gi|15242316|ref|NP_197053.1| UDP-glucose
6-dehydrogenase, putative [Arabidopsis thaliana]
gi|11251696|pir||T51527 UDP-glucose dehydrogenase-like
protein - Arabidopsis thaliana
Length = 480
Score = 73.2 bits (178), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK S +V VVDI+ RI AW +DQ+PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPSVEVAVVDISVPRINAWNSDQLPIYEPGLDDVVKQCRGKNLFFSTD 71
>gb|AAM47595.1| putative UDP-glucose dehydrogenase [Sorghum bicolor]
Length = 217
Score = 72.0 bits (175), Expect = 4e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK +V VVDI+K RI AW +D +PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQCRGKNLFFSTD 71
>gb|AAR84297.1| UDP-glucose dehydrogenase [Cinnamomum osmophloeum]
Length = 480
Score = 72.0 bits (175), Expect = 4e-12
Identities = 33/55 (60%), Positives = 43/55 (78%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK S +V VVDI+ +RI AW ++Q+PIY+PG D +VKQCR +NLFF T+
Sbjct: 17 MAVIALKCPSIEVVVVDISVARIAAWNSEQLPIYEPGLDDVVKQCRGRNLFFSTD 71
>gb|AAP21188.1| At5g39320 [Arabidopsis thaliana]
Length = 479
Score = 71.6 bits (174), Expect = 5e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK +V VVDI+ RI AW +DQ+PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPDIEVAVVDISVPRINAWNSDQLPIYEPGLDDIVKQCRGKNLFFSTD 71
>ref|NP_198748.1| UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana]
Length = 480
Score = 71.6 bits (174), Expect = 5e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK +V VVDI+ RI AW +DQ+PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPDIEVAVVDISVPRINAWNSDQLPIYEPGLDDIVKQCRGKNLFFSTD 71
>gb|AAO62313.1| UDP-glucose dehydrogenase [Colocasia esculenta]
Length = 480
Score = 70.9 bits (172), Expect = 9e-12
Identities = 33/55 (60%), Positives = 42/55 (76%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK + +V VVDI+ RI AW +DQ+PIY+PG D +VKQCR +NLFF T+
Sbjct: 17 MAVIALKCPAIEVVVVDISVVRIAAWNSDQLPIYEPGLDEVVKQCRGRNLFFSTD 71
>gb|AAK16194.1| putative UDP-glucose dehydrogenase [Oryza sativa (japonica
cultivar-group)] gi|50918875|ref|XP_469834.1| putative
UDP-glucose dehydrogenase [Oryza sativa (japonica
cultivar-group)]
Length = 480
Score = 70.1 bits (170), Expect = 1e-11
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK + +V VVDI+K RI AW ++Q+PIY+PG D +VK+CR +NLFF T+
Sbjct: 17 MAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTD 71
>gb|AAT40106.1| putative UDP-glucose dehydrogenase 2 [Nicotiana tabacum]
Length = 524
Score = 70.1 bits (170), Expect = 1e-11
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK S +V VVDI+ RI AW +DQ+PIY+PG + +VK+CR +NLFF T+
Sbjct: 17 MAVIALKCPSIEVAVVDISVPRITAWNSDQLPIYEPGLEDVVKECRGRNLFFSTD 71
>gb|AAT40105.1| putative UDP-glucose dehydrogenase 1 [Nicotiana tabacum]
Length = 545
Score = 70.1 bits (170), Expect = 1e-11
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK S +V VVDI+ RI AW +DQ+PIY+PG + +VK+CR +NLFF T+
Sbjct: 17 MAVIALKCPSIEVAVVDISVPRITAWNSDQLPIYEPGLEDVVKECRGRNLFFSTD 71
>gb|AAM67208.1| UDP-glucose dehydrogenase, putative [Arabidopsis thaliana]
Length = 480
Score = 69.3 bits (168), Expect = 3e-11
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK +V VVDI+ RI AW +D +PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQCRGKNLFFSTD 71
>dbj|BAB02581.1| UDP-glucose dehydrogenase [Arabidopsis thaliana]
gi|60543327|gb|AAX22261.1| At3g29360 [Arabidopsis
thaliana] gi|15228687|ref|NP_189582.1| UDP-glucose
6-dehydrogenase, putative [Arabidopsis thaliana]
Length = 480
Score = 69.3 bits (168), Expect = 3e-11
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK +V VVDI+ RI AW +D +PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQCRGKNLFFSTD 71
>gb|AAL11570.1| AT3g29360/MUO10_6 [Arabidopsis thaliana]
Length = 480
Score = 69.3 bits (168), Expect = 3e-11
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK +V VVDI+ RI AW +D +PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQCRGKNLFFSTD 71
>gb|AAN28861.1| At1g26570/T1K7_6 [Arabidopsis thaliana]
gi|17979522|gb|AAL50096.1| At1g26570/T1K7_6
[Arabidopsis thaliana] gi|15222735|ref|NP_173979.1|
UDP-glucose 6-dehydrogenase, putative [Arabidopsis
thaliana] gi|25283960|pir||G86392 T1K7.6 protein -
Arabidopsis thaliana gi|9797743|gb|AAF98561.1| Strong
similarity to UDP-Glucose 6-Dehydrogenase from Glycine
max gb|6136119 and is a member of the
UDP-glucose/GDP-mannose dehydrogenase PF|00984 family.
ESTs gb|AV566422, gb|AV555903 come from this gene.
[Arabidopsis thaliana]
Length = 481
Score = 68.2 bits (165), Expect = 6e-11
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA +ALK +V VVDI++ RI AW +D++PIY+PG + +VKQCR KNLFF T+
Sbjct: 17 MAVMALKCPEIEVVVVDISEPRINAWNSDRLPIYEPGLEDVVKQCRGKNLFFSTD 71
>gb|AAM61009.1| UDP-glucose dehydrogenase, putative [Arabidopsis thaliana]
Length = 481
Score = 68.2 bits (165), Expect = 6e-11
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA +ALK +V VVDI++ RI AW +D++PIY+PG + +VKQCR KNLFF T+
Sbjct: 17 MAVMALKCPEIEVVVVDISEPRINAWNSDRLPIYEPGLEDVVKQCRGKNLFFSTD 71
>gb|AAR32717.1| UDP-glucose dehydrogenase [Populus tomentosa]
Length = 481
Score = 65.9 bits (159), Expect = 3e-10
Identities = 31/52 (59%), Positives = 39/52 (74%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFF 52
MA IALK S +V VVDI + RI AW +DQ+PIY+PG +VK+CR +NLFF
Sbjct: 17 MAVIALKCPSIEVVVVDIWEPRIAAWNSDQLPIYEPGLYDVVKECRGRNLFF 68
>gb|AAF04455.1| UDP-glucose dehydrogenase [Populus tremula x Populus tremuloides]
Length = 481
Score = 65.9 bits (159), Expect = 3e-10
Identities = 31/52 (59%), Positives = 39/52 (74%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFF 52
MA IALK S +V VVDI + RI AW +DQ+PIY+PG +VK+CR +NLFF
Sbjct: 17 MAVIALKCPSIEVVVVDIWEPRIAAWNSDQLPIYEPGLYDVVKECRGRNLFF 68
>gb|AAT78767.1| putative UDP-glucose dehydrogenase [Oryza sativa (japonica
cultivar-group)]
Length = 466
Score = 65.5 bits (158), Expect = 4e-10
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK +V VVDI+ RI W ++++PIY+PG D +V+QCR +NLFF T+
Sbjct: 1 MAVIALKCPDVEVVVVDISAPRIEGWNSERLPIYEPGLDDVVRQCRGRNLFFSTD 55
>ref|XP_468764.1| UDP-glucose dehydrogenase [Oryza sativa (japonica
cultivar-group)] gi|41469358|gb|AAS07200.1| UDP-glucose
dehydrogenase [Oryza sativa (japonica cultivar-group)]
Length = 481
Score = 65.1 bits (157), Expect = 5e-10
Identities = 29/55 (52%), Positives = 41/55 (73%)
Query: 1 MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
MA IALK +V VVDI+ +RI AW +D +PIY+PG D +V++CR +NLFF ++
Sbjct: 17 MAVIALKCPDVEVVVVDISAARIDAWNSDALPIYEPGLDDVVRRCRGRNLFFSSD 71
>ref|XP_396801.2| PREDICTED: similar to CG10072-PA [Apis mellifera]
Length = 479
Score = 62.8 bits (151), Expect = 2e-09
Identities = 28/54 (51%), Positives = 39/54 (71%)
Query: 2 AAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
+ IALK VTVVD +K RI W ++++PIY+PG D +V++CR KNLFF T+
Sbjct: 20 SVIALKCPEIQVTVVDKSKERIAQWNSEKLPIYEPGLDEVVRKCRGKNLFFSTD 73
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.326 0.140 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,456,443
Number of Sequences: 2540612
Number of extensions: 2531515
Number of successful extensions: 6413
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6334
Number of HSP's gapped (non-prelim): 82
length of query: 55
length of database: 863,360,394
effective HSP length: 31
effective length of query: 24
effective length of database: 784,601,422
effective search space: 18830434128
effective search space used: 18830434128
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)
Medicago: description of AC149305.10