BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149209.4 + phase: 0 /pseudo
(205 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_909673.1| putative membrane-associated salt-inducible pro... 80 3e-14
ref|NP_172058.1| UDP-glucoronosyl/UDP-glucosyl transferase famil... 80 5e-14
gb|AAP04079.1| unknown protein [Arabidopsis thaliana] gi|9759377... 79 6e-14
ref|NP_172145.1| pentatricopeptide (PPR) repeat-containing prote... 79 6e-14
gb|AAG52140.1| hypothetical protein; 19198-19943 [Arabidopsis th... 79 1e-13
ref|NP_197167.1| pentatricopeptide (PPR) repeat-containing prote... 77 2e-13
dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana] g... 77 4e-13
ref|NP_176639.1| pentatricopeptide (PPR) repeat-containing prote... 76 7e-13
pir||C96669 protein F1N19.15 [imported] - Arabidopsis thaliana g... 76 7e-13
ref|XP_477613.1| putative fertility restorer homologue [Oryza sa... 75 9e-13
gb|AAF75798.1| Contains multiple PPR Repeats PF|01535. [Arabidop... 75 9e-13
ref|NP_176474.1| pentatricopeptide (PPR) repeat-containing prote... 75 9e-13
ref|NP_909693.1| putative pentatricopeptide repeat protein [Oryz... 75 1e-12
dbj|BAD54485.1| putative fertility restorer homologue [Oryza sat... 75 1e-12
gb|AAF78482.1| Contains similarity to an unknown protein F16M19.... 75 1e-12
gb|AAF75801.1| Contains a RepB PF|01051 protein domain and multi... 75 1e-12
ref|NP_176479.1| pentatricopeptide (PPR) repeat-containing prote... 75 1e-12
ref|NP_172737.1| DEAD/DEAH box helicase family protein / pentatr... 75 1e-12
dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containi... 75 1e-12
gb|AAM93691.1| hypothetical protein [Oryza sativa (japonica cult... 74 2e-12
>ref|NP_909673.1| putative membrane-associated salt-inducible protein [Oryza sativa]
gi|12583808|gb|AAG59660.1| putative membrane-associated
salt-inducible protein [Oryza sativa]
Length = 772
Score = 80.5 bits (197), Expect = 3e-14
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A+EI + G PNVV Y+T +KGLC A + +L+ M +++ P+++ FN ++
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN--AKDVGIEVDIMSCNFLLKCLVDA 134
CQ G +D ++LE+M S G +PDV Y +N K+ I+ +M + C
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Query: 135 NRVGDDDDDDDDDGVSVSVSADIS-----PASEIFGNIYRSGETPNVVTYSTYIKGLCKA 189
N V ++ + S A E+ + + G PN VT++T I LCK
Sbjct: 425 NTV----------SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 190 GSLRVVWKLICNM 202
G + +L+ M
Sbjct: 475 GLVEQAIELLKQM 487
Score = 65.9 bits (159), Expect = 7e-10
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 33/199 (16%)
Query: 19 EIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGL 78
E+ + R PN+VT++T I LC+ G V +++ M + + I+ G+
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 79 CQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVG 138
C+ G L+ A+++L M S G+ P+V Y N +LK L A R
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCY------------------NTVLKGLCSAERWK 338
Query: 139 DDDD--------DDDDDGVSVSVSAD-------ISPASEIFGNIYRSGETPNVVTYSTYI 183
+ ++ D D V+ ++ D + E+ + G P+V+TY+T I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Query: 184 KGLCKAGSLRVVWKLICNM 202
G CK G + L+ +M
Sbjct: 399 NGFCKEGLIDEAVMLLKSM 417
Score = 62.0 bits (149), Expect = 1e-08
Identities = 56/235 (23%), Positives = 100/235 (41%), Gaps = 36/235 (15%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N +C++ I A + ++ G PN V+Y+ +KGLC AG +L+ M
Sbjct: 398 INGFCKE----GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA-------- 112
++ P N FN ++ LC++G +++A ++L++M G PD+ Y ++
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 113 ---------KDVGIEVDIMSCNFLLKCLVDANRVG------DDDDDDDDDGVSVSVSADI 157
+ GI + + + + L RV D+ D +V +A I
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 158 SP---------ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 203
S A + F + +G PN TY+ IKGL G + +L+ +C
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628
Score = 61.2 bits (147), Expect = 2e-08
Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 72/244 (29%)
Query: 27 SGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDE 86
+G+ VV Y+ + G C+AG L +L + P N + F ++ GLC RG + +
Sbjct: 73 AGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIAD 129
Query: 87 ASQVLEEMKSIGILPDVYGYYVFVNA---------------------------------- 112
A +VL+EM G P Y+V + A
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189
Query: 113 ---------KDVGI---------EVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVS 154
+ VG+ E DI+S N +LK L A R G D ++ D+ V V +
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG-DVEELMDEMVRVDCA 248
Query: 155 ADISPASEIFGNIYRSGE----------------TPNVVTYSTYIKGLCKAGSLRVVWKL 198
+I + + G + R+G TP++ Y+T I G+CK G L V ++
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 199 ICNM 202
+ M
Sbjct: 309 LNRM 312
>ref|NP_172058.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis thaliana] gi|25406853|pir||H86190
hypothetical protein [imported] - Arabidopsis thaliana
gi|4836917|gb|AAD30619.1| similar to indole-3-acetate
beta-glucosyltransferase [Arabidopsis thaliana]
Length = 1184
Score = 79.7 bits (195), Expect = 5e-14
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
++ A E F + R G P+ V Y+T I G CK G +R K M + + + A
Sbjct: 775 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN--AKDVGIEVDIMSCNFLLKCL 131
I+ G CQ G++ EA ++ EM G+ PD + +N K ++ N +++
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 132 VDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGS 191
N V D + D+ A+E+ +++ G PN+ TY++ + GLCK+G+
Sbjct: 895 CSPNVVTYTTLID-----GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 949
Query: 192 LRVVWKLI 199
+ KL+
Sbjct: 950 IEEAVKLV 957
Score = 75.9 bits (185), Expect = 7e-13
Identities = 51/189 (26%), Positives = 91/189 (47%), Gaps = 7/189 (3%)
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
D+ A ++F ++ G P+ VT++ I G CKAG ++ +++ +M + N +
Sbjct: 844 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 903
Query: 73 AIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN--AKDVGIEVDIMSCNFLLKC 130
++ GLC+ G+LD A+++L EM IG+ P+++ Y VN K IE +
Sbjct: 904 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 963
Query: 131 LVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAG 190
++A+ V D + S ++ A EI + G P +VT++ + G C G
Sbjct: 964 GLNADTVTYTTLMD-----AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 191 SLRVVWKLI 199
L KL+
Sbjct: 1019 MLEDGEKLL 1027
Score = 75.1 bits (183), Expect = 1e-12
Identities = 59/207 (28%), Positives = 96/207 (45%), Gaps = 32/207 (15%)
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G TP+V++YST + G C+ G L VWKLI M R+ N++ + +I+ LC+ +L EA
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 778
Query: 88 SQVLEEMKSIGILPDVYGYYVFVN-----------------------AKDVGIEVDIMSC 124
+ EM GILPD Y ++ DV I+S
Sbjct: 779 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 838
Query: 125 NFLLKCLVDANRVGDD--DDDDDDDGVSVS-------VSADISPASEIFGNIYRSGETPN 175
+ +V+A ++ + + D V+ + + + A + ++ ++G +PN
Sbjct: 839 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898
Query: 176 VVTYSTYIKGLCKAGSLRVVWKLICNM 202
VVTY+T I GLCK G L +L+ M
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEM 925
Score = 55.1 bits (131), Expect = 1e-06
Identities = 42/192 (21%), Positives = 76/192 (38%), Gaps = 38/192 (19%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
S +I A ++ G +G + VTY+T + CK+G + +++ M +
Sbjct: 947 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 1006
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKC 130
FN +M G C G L++ ++L M + GI P+ + N L+K
Sbjct: 1007 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF------------------NSLVK- 1047
Query: 131 LVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAG 190
+ ++ A+ I+ ++ G P+ TY +KG CKA
Sbjct: 1048 -------------------QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 1088
Query: 191 SLRVVWKLICNM 202
+++ W L M
Sbjct: 1089 NMKEAWFLFQEM 1100
Score = 45.8 bits (107), Expect = 7e-04
Identities = 26/108 (24%), Positives = 53/108 (49%)
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
++ A+ I+ ++ G P+ TY +KG CKA +++ W L M + ++ ++
Sbjct: 1054 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 1113
Query: 73 AIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVD 120
++ G +R + EA +V ++M+ G+ D + F + K G D
Sbjct: 1114 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 1161
Score = 40.8 bits (94), Expect = 0.024
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 38/153 (24%)
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGIL--------------PDVY----GYYVFVNA 112
F+ L G L EA +V E+M + G++ D Y VF
Sbjct: 621 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 680
Query: 113 KDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGE 172
+VG+ ++ S N ++ + R+ + A + + G
Sbjct: 681 PEVGVCWNVASYNIVIHFVCQLGRIKE--------------------AHHLLLLMELKGY 720
Query: 173 TPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 205
TP+V++YST + G C+ G L VWKLI M R+
Sbjct: 721 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753
>gb|AAP04079.1| unknown protein [Arabidopsis thaliana] gi|9759377|dbj|BAB10028.1|
unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis
thaliana] gi|15239874|ref|NP_196771.1| pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 79.3 bits (194), Expect = 6e-14
Identities = 54/196 (27%), Positives = 89/196 (44%), Gaps = 37/196 (18%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
++ A ++F + P+++TY+T I G CKAG+ +K+ M ++ + FN
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVY-------GYY----------VFVNAKDVG 116
++ GL + G +++A VL+EMK +G +PD + GY V+ A D G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 117 IEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNV 176
++++ +C+ LL L + I A EI G G PN
Sbjct: 350 VKMNAYTCSILLNALCKEGK--------------------IEKAEEILGREMAKGLVPNE 389
Query: 177 VTYSTYIKGLCKAGSL 192
V Y+T I G C+ G L
Sbjct: 390 VIYNTMIDGYCRKGDL 405
Score = 69.3 bits (168), Expect = 6e-11
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N C++ + I A EI G G PN V Y+T I G C+ G L I M
Sbjct: 361 LNALCKEGK----IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA-------- 112
++ ++ +N ++ C+ GE++ A + + +MK G+ P V Y + +
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 113 ---------KDVGIEVDIMSCNFLLKCLVDANRVGDDD---DDDDDDGVSVSV------- 153
+D G +++S L+ CL +++ + D +D GVS V
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 154 -----SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 205
I A + + G N+VTY+T I GL G L L+ + R+
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK 593
Score = 48.9 bits (115), Expect = 9e-05
Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 33/181 (18%)
Query: 27 SGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDE 86
SG N T S + LCK G + +++ + N +N ++ G C++G+L
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 87 ASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDD 146
A +E M+ G+ PD Y N L++ + + + + + +
Sbjct: 408 ARMKIEAMEKQGMKPDHLAY------------------NCLIRRFCELGEMENAEKEVNK 449
Query: 147 ---DGVSVSVSA------------DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGS 191
GVS SV + +I + +G PNVV+Y T I LCK
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 192 L 192
L
Sbjct: 510 L 510
Score = 48.1 bits (113), Expect = 1e-04
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G +P V Y+ I G C G + ++ M ++ +N +N ++ GL G+L EA
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 88 SQVLEEMKSIGILPDVYGY 106
+L E+ G+ PDV+ Y
Sbjct: 584 EDLLLEISRKGLKPDVFTY 602
Score = 45.4 bits (106), Expect = 0.001
Identities = 44/202 (21%), Positives = 77/202 (37%), Gaps = 33/202 (16%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
I A + + G N+VTY+T I GL G L L+ + R+ + +N+
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA-------------KDVGIEVD 120
++ G G + + EEMK GI P + Y++ ++ ++ ++ D
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPD 664
Query: 121 IMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYS 180
++ N +L C +V D+ A + + + TY+
Sbjct: 665 LLVYNGVLHC--------------------YAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 181 TYIKGLCKAGSLRVVWKLICNM 202
+ I G K G L V LI M
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEM 726
>ref|NP_172145.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|6692678|gb|AAF24812.1| F12K11.8
[Arabidopsis thaliana]
Length = 500
Score = 79.3 bits (194), Expect = 6e-14
Identities = 51/189 (26%), Positives = 79/189 (40%), Gaps = 38/189 (20%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A ++ + G PN VTY+T I G CKA + K++C M R+ + +N
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVD 133
+ G CQ G+ A +VL M S G+ PD+Y + N LL L D
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF------------------NILLDGLCD 406
Query: 134 ANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLR 193
++G A ++ +S ++TY+ IKGLCKA +
Sbjct: 407 HGKIG--------------------KALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVE 446
Query: 194 VVWKLICNM 202
W L C++
Sbjct: 447 DAWYLFCSL 455
Score = 68.6 bits (166), Expect = 1e-10
Identities = 55/234 (23%), Positives = 101/234 (42%), Gaps = 36/234 (15%)
Query: 4 YCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN 63
+CR R S +S G + + G P++VT+ + + G C L+ +
Sbjct: 124 FCRCARLSLALS----CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 64 QPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFV------------- 110
N +N I+ LC++G+++ A VL+ MK +GI PDV Y +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 111 ----NAKDVGIEVDIMSCNFLLKC------LVDANRVGDDDDDDDDDGVSVSVSADIS-- 158
+ +GI D+++ + L+ L++A + ++ + V+ ++ I+
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 159 -------PASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 205
A ++ + G PN VTY+T I G CKA + K++C M R+
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353
Score = 65.1 bits (157), Expect = 1e-09
Identities = 45/176 (25%), Positives = 78/176 (43%), Gaps = 3/176 (1%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
++ I ++ R G +P+V+T+S I K G L K M + + N +N+++
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANR 136
GLC G LDEA +VL + S G P+ Y +N VD + C++ +
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD---DGMKILCVMSRDG 354
Query: 137 VGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 192
V D + + S A ++ G + G P++ T++ + GLC G +
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Score = 42.4 bits (98), Expect = 0.008
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 4 YCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN 63
YC+ + SA A ++ G + G P++ T++ + GLC G + + ++ +
Sbjct: 369 YCQAGKFSA----AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 64 QPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGY 106
+ +N I+ GLC+ ++++A + + G+ PDV Y
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 41.2 bits (95), Expect = 0.018
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 23 NIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRG 82
++ +S ++TY+ IKGLCKA + W L C++ + + + +M GL ++
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKR 478
Query: 83 ELDEASQVLEEM-KSIGILP 101
EA ++ +M K G++P
Sbjct: 479 LWREAHELYRKMQKEDGLMP 498
>gb|AAG52140.1| hypothetical protein; 19198-19943 [Arabidopsis thaliana]
gi|25404419|pir||B96659 hypothetical protein F9N12.6
[imported] - Arabidopsis thaliana
Length = 233
Score = 78.6 bits (192), Expect = 1e-13
Identities = 52/174 (29%), Positives = 81/174 (45%), Gaps = 22/174 (12%)
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
PNVVTY+T IKG CKA + +L M + N + ++ GL Q G+ D A ++
Sbjct: 12 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEI 71
Query: 91 LEEMKSIGILPDVYGYYVFVN--AKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDG 148
+EM S G+ PD+ Y + ++ K+ +E ++ ++ K + A +V D D
Sbjct: 72 FKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVVFGYMQKRMCKAGKVEDGWD------ 125
Query: 149 VSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
+F ++ G PNVVTY+T I G CK G + L M
Sbjct: 126 --------------LFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 165
Score = 53.1 bits (126), Expect = 5e-06
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 20/122 (16%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCK--------------------AGSLR 50
+ D A EIF + G P+++TY+ + GLCK AG +
Sbjct: 62 AGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVVFGYMQKRMCKAGKVE 121
Query: 51 VVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFV 110
W L C++ + N + ++ G C++G +EA + +MK G LPD Y +
Sbjct: 122 DGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 181
Query: 111 NA 112
A
Sbjct: 182 RA 183
Score = 44.7 bits (104), Expect = 0.002
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 4 YCRDVRCSAD-ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 62
Y + C A + ++F ++ G PNVVTY+T I G CK G + L M +
Sbjct: 109 YMQKRMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKED 168
Query: 63 NQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGY 106
++ +N ++ + G+ ++++++EM+S D Y
Sbjct: 169 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 212
>ref|NP_197167.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|10176973|dbj|BAB10191.1| unnamed protein
product [Arabidopsis thaliana]
Length = 504
Score = 77.4 bits (189), Expect = 2e-13
Identities = 49/189 (25%), Positives = 81/189 (41%), Gaps = 38/189 (20%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A E+FG + G P+VVTYS I G CK+ + KL C M + N +
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVD 133
++ G C+ G+L+ A ++ M G+ P++ Y N LL L D
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY------------------NVLLHGLCD 408
Query: 134 ANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLR 193
+ I A I ++ ++G ++VTY+ I+G+CKAG +
Sbjct: 409 --------------------NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 194 VVWKLICNM 202
W + C++
Sbjct: 449 DAWDIYCSL 457
Score = 74.3 bits (181), Expect = 2e-12
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 36/234 (15%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N +CR CS +S A G + + G P++VT+ + + G C+ + + M
Sbjct: 123 LNCFCR---CS-QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA-------- 112
N +N I+ GLC+ ++D A +L M+ GI PDV Y ++
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 113 ---------KDVGIEVDIMSCNFLLKCLVDANRVGDDDD--------DDDDDGVSVS--- 152
I D+ + N L+ V RV + ++ D D V+ S
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 153 ----VSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
+ + + A E+FG + G P+VVTYS I G CK+ + KL C M
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Score = 62.8 bits (151), Expect = 6e-09
Identities = 46/193 (23%), Positives = 85/193 (43%), Gaps = 42/193 (21%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N YC+ S + ++F + + G N VTY+ I+G C+AG L V ++ M
Sbjct: 333 INGYCK----SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVD 120
N +N +++GLC G++++A +L +M+ G++ D
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK------------------NGMDAD 430
Query: 121 IMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYS 180
I++ N +++ + A V D A +I+ ++ G P++ TY+
Sbjct: 431 IVTYNIIIRGMCKAGEVAD--------------------AWDIYCSLNCQGLMPDIWTYT 470
Query: 181 TYIKGLCKAGSLR 193
T + GL K G R
Sbjct: 471 TMMLGLYKKGLRR 483
Score = 55.1 bits (131), Expect = 1e-06
Identities = 27/89 (30%), Positives = 49/89 (54%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
I A I ++ ++G ++VTY+ I+G+CKAG + W + C++ + + +
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPD 102
+M GL ++G EA + +MK GILP+
Sbjct: 472 MMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 37.4 bits (85), Expect = 0.26
Identities = 30/159 (18%), Positives = 59/159 (36%), Gaps = 38/159 (23%)
Query: 32 NVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVL 91
N+ T + + C+ L + + M + + F +++ G C+ + +A +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 92 EEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSV 151
++M +G P+V Y + DG+
Sbjct: 175 DQMVGMGYKPNVVIYNTII------------------------------------DGLCK 198
Query: 152 SVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAG 190
S D A ++ + + G P+VVTY++ I GLC +G
Sbjct: 199 SKQVD--NALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
>dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|15240249|ref|NP_200948.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 76.6 bits (187), Expect = 4e-13
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 7/199 (3%)
Query: 4 YCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN 63
YC+ + ++ A ++ I + PNVV + T + G CKA L L +M +
Sbjct: 279 YCK----TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 64 QPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMS 123
N + +N +++G C+ G + EA +L EM+S+ + PDV+ Y + +N + IE +
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING--LCIEDQVAE 392
Query: 124 CNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYI 183
N L + + + R+ + ++ A ++ + SG PN++T+ST I
Sbjct: 393 ANRLFQKMKN-ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 184 KGLCKAGSLRVVWKLICNM 202
G C ++ L M
Sbjct: 452 DGYCNVRDIKAAMGLYFEM 470
Score = 52.0 bits (123), Expect = 1e-05
Identities = 48/221 (21%), Positives = 87/221 (38%), Gaps = 35/221 (15%)
Query: 6 RDVRCSADISPASEIFGNIYRS----------------GETPNVVTYSTYIKGLCKAGSL 49
R+++CS D I + R G P+V Y + K G
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 50 RVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVF 109
KL+ M N + + + LC+ +++EA ++ E MK G+LP++Y Y
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 110 VNA--------KDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPAS 161
++ + G+ +I+ L +V V DG + ++ A
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV---------DG--FCKARELVTAR 324
Query: 162 EIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
+F ++ + G PN+ Y+ I G CK+G++ L+ M
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Score = 50.4 bits (119), Expect = 3e-05
Identities = 27/95 (28%), Positives = 47/95 (49%)
Query: 12 ADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCF 71
A++ A ++ ++ +G PN T++ + G K G L V ++ N+ F
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552
Query: 72 NAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGY 106
++ GLCQ G + AS+ +M+S GI PD+ Y
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587
Score = 45.1 bits (105), Expect = 0.001
Identities = 48/223 (21%), Positives = 85/223 (37%), Gaps = 32/223 (14%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
++ A+ +F + P+ TY++ I G CK ++ L M N F+
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA--KDVG-----------IEVD 120
++ G C ++ A + EM GI+PDV Y ++A K+ +E
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 121 IMSCNFLLKCLVDA----NRVGDDDDDDDDDGVSVSV---------------SADISPAS 161
I + CLVD R+ D ++ S + I AS
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRAS 569
Query: 162 EIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCR 204
F ++ G TP++ +Y + +KG + + L C+M +
Sbjct: 570 RFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIK 612
>ref|NP_176639.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 1052
Score = 75.9 bits (185), Expect = 7e-13
Identities = 52/197 (26%), Positives = 89/197 (44%), Gaps = 14/197 (7%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A +F + G P+VVTY+T I G CK+ + KL C M + + +N
Sbjct: 834 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 893
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVD 133
+++G CQ G+L+ A +V M G+ PD+ Y + ++ + + + K LV
Sbjct: 894 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC--------LCNNGKIEKALVM 945
Query: 134 ANRVGDDDDDDDDDGVSVSVSA-----DISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
+ + D D ++ + + A +F ++ R G P+ + Y T I GLC+
Sbjct: 946 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1005
Query: 189 AGSLRVVWKLICNMCRE 205
G R KL C +E
Sbjct: 1006 KGLQREADKL-CRRMKE 1021
Score = 73.6 bits (179), Expect = 3e-12
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 26 RSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELD 85
+SG PNVV Y+T I GLCK G L + +L+ M ++ + +N ++ GLC G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 86 EASQVLEEMKSIGILPDVYGYYVFVN--AKDVGIEVDIMSCNFLLKCLVDANRVGDDDDD 143
+A+++L +M I PDV + ++ K ++ +++ VD N V +
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 144 DDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
+ + + + A + F + G PNVVTY+T I G CK
Sbjct: 289 N-----GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Score = 66.2 bits (160), Expect = 5e-10
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 38/201 (18%)
Query: 9 RCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINN 68
RCS +S A + G + + G P++VT+ + + G C + + L+ M + N
Sbjct: 118 RCSR-LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNV 176
Query: 69 HCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA--------------KD 114
+N ++ GLC+ GEL+ A ++L EM+ G+ DV Y + +D
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 115 V---GIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSG 171
+ I D+++ L+ V ++ A E++ + +S
Sbjct: 237 MMKRSINPDVVTFTALIDVFVK--------------------QGNLDEAQELYKEMIQSS 276
Query: 172 ETPNVVTYSTYIKGLCKAGSL 192
PN VTY++ I GLC G L
Sbjct: 277 VDPNNVTYNSIINGLCMHGRL 297
Score = 65.1 bits (157), Expect = 1e-09
Identities = 54/220 (24%), Positives = 89/220 (39%), Gaps = 32/220 (14%)
Query: 15 SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAI 74
S A+ + ++ + P+VVT++ I K G+L +L M + + NN +N+I
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 75 MYGLCQRGELDEASQVLEEMKSIGILPDVY-----------------GYYVFVNAKDVGI 117
+ GLC G L +A + + M S G P+V G +F G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 118 EVDIMSCNFLLK---------------CLVDANRVGDDDDDDDDDGVSVSVSADISPASE 162
DI + N L+ C + + RV D + V+ +I A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 163 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
F ++ S + +V Y+ I GLCKA + W+L C +
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447
Score = 62.4 bits (150), Expect = 8e-09
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 23/199 (11%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A + F + G PNVVTY+T I G CK + KL M E + +N +++
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANR 136
G CQ G+L A + M S + PD+ + + ++ V E++ F
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF---------- 409
Query: 137 VGDDDDDDDDDGVSVSV---------SAD-ISPASEIFGNIYRSGETPNVVTYSTYIKGL 186
DD + + + + AD + A E+F + G P+ TY+ I GL
Sbjct: 410 ---DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 187 CKAGSLRVVWKLICNMCRE 205
CK G R +LI M E
Sbjct: 467 CKNGPRREADELIRRMKEE 485
Score = 57.8 bits (138), Expect = 2e-07
Identities = 51/207 (24%), Positives = 87/207 (41%), Gaps = 37/207 (17%)
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
D++ A E+F + + G + VTY+T I GL +G +L+ +M + N F
Sbjct: 728 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 787
Query: 73 AIMYGLCQRGELDEASQVLEEMKSIGILPDVYGY-----------------YVFVNAKDV 115
A++ + G L EA + +EM ++P+V+ Y Y+F
Sbjct: 788 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 847
Query: 116 GIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPN 175
G D+++ N L+ + RV +DG+ ++F + G +
Sbjct: 848 GCFPDVVTYNTLITGFCKSKRV--------EDGM------------KLFCEMTYQGLVGD 887
Query: 176 VVTYSTYIKGLCKAGSLRVVWKLICNM 202
TY+T I G C+AG L V K+ M
Sbjct: 888 AFTYNTLIHGYCQAGKLNVAQKVFNRM 914
Score = 57.0 bits (136), Expect = 3e-07
Identities = 50/202 (24%), Positives = 89/202 (43%), Gaps = 7/202 (3%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N +C+ R +S + G G PNVV Y+T I GLCK L ++ M
Sbjct: 685 LNGFCQGNRFQEAVSLVDSMDG----FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 740
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVD 120
++ + +N ++ GL G +A+++L +M I P+V + ++ E +
Sbjct: 741 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT--FVKEGN 798
Query: 121 IMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYS 180
++ L K ++ + V + + + + A +F + G P+VVTY+
Sbjct: 799 LLEARNLYKEMIRRSVVPNVFTYNSLIN-GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 857
Query: 181 TYIKGLCKAGSLRVVWKLICNM 202
T I G CK+ + KL C M
Sbjct: 858 TLITGFCKSKRVEDGMKLFCEM 879
Score = 52.8 bits (125), Expect = 6e-06
Identities = 45/186 (24%), Positives = 80/186 (42%), Gaps = 8/186 (4%)
Query: 9 RCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINN 68
RCS +S A + G + + G P++VT + + G C+ + L+ +M N
Sbjct: 655 RCSR-LSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV 713
Query: 69 HCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA-KDVGIEVDIMS-CNF 126
+N ++ GLC+ +L+ A +V M+ GI D Y ++ + G D
Sbjct: 714 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 773
Query: 127 LLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGL 186
++K +D N + D + ++ A ++ + R PNV TY++ I G
Sbjct: 774 MVKRKIDPNVIFFTALID-----TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 828
Query: 187 CKAGSL 192
C G L
Sbjct: 829 CIHGCL 834
Score = 52.0 bits (123), Expect = 1e-05
Identities = 26/90 (28%), Positives = 45/90 (49%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
+ +I A F ++ S + +V Y+ I GLCKA + W+L C + E +
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGIL 100
+ ++ GLC+ G EA +++ MK GI+
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 46.6 bits (109), Expect = 4e-04
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
I A + ++ +S +++TY+ I+GLC+ L+ W L ++ R+ + +
Sbjct: 939 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 998
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILP 101
++ GLC++G EA ++ MK G +P
Sbjct: 999 MISGLCRKGLQREADKLCRRMKEDGFMP 1026
Score = 40.0 bits (92), Expect = 0.040
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 37/128 (28%)
Query: 92 EEMKSIGILPDVYGYYVFVNA-----------------KDVGIEVDIMSCNFLLKCLVDA 134
++M+ GI D+Y + + ++ +G E I++ LL
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 135 NRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRV 194
NR+GD A + + +SG PNVV Y+T I GLCK G L +
Sbjct: 155 NRIGD--------------------AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI 194
Query: 195 VWKLICNM 202
+L+ M
Sbjct: 195 ALELLNEM 202
Score = 33.1 bits (74), Expect = 4.9
Identities = 32/153 (20%), Positives = 56/153 (35%), Gaps = 37/153 (24%)
Query: 53 WKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA 112
+ L C M + + F ++ + + + D + +M+++GI D+Y + + ++
Sbjct: 593 FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHC 652
Query: 113 -----------------KDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSA 155
+G I++ LL NR + VS+ S
Sbjct: 653 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRF--------QEAVSLVDSM 704
Query: 156 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
D G PNVV Y+T I GLCK
Sbjct: 705 D------------GFGFVPNVVIYNTVINGLCK 725
>pir||C96669 protein F1N19.15 [imported] - Arabidopsis thaliana
gi|6633829|gb|AAF19688.1| F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 75.9 bits (185), Expect = 7e-13
Identities = 52/197 (26%), Positives = 89/197 (44%), Gaps = 14/197 (7%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A +F + G P+VVTY+T I G CK+ + KL C M + + +N
Sbjct: 830 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 889
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVD 133
+++G CQ G+L+ A +V M G+ PD+ Y + ++ + + + K LV
Sbjct: 890 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC--------LCNNGKIEKALVM 941
Query: 134 ANRVGDDDDDDDDDGVSVSVSA-----DISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
+ + D D ++ + + A +F ++ R G P+ + Y T I GLC+
Sbjct: 942 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1001
Query: 189 AGSLRVVWKLICNMCRE 205
G R KL C +E
Sbjct: 1002 KGLQREADKL-CRRMKE 1017
Score = 73.6 bits (179), Expect = 3e-12
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 26 RSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELD 85
+SG PNVV Y+T I GLCK G L + +L+ M ++ + +N ++ GLC G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 86 EASQVLEEMKSIGILPDVYGYYVFVN--AKDVGIEVDIMSCNFLLKCLVDANRVGDDDDD 143
+A+++L +M I PDV + ++ K ++ +++ VD N V +
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 144 DDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
+ + + + A + F + G PNVVTY+T I G CK
Sbjct: 289 N-----GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Score = 66.2 bits (160), Expect = 5e-10
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 38/201 (18%)
Query: 9 RCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINN 68
RCS +S A + G + + G P++VT+ + + G C + + L+ M + N
Sbjct: 118 RCSR-LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNV 176
Query: 69 HCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA--------------KD 114
+N ++ GLC+ GEL+ A ++L EM+ G+ DV Y + +D
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 115 V---GIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSG 171
+ I D+++ L+ V ++ A E++ + +S
Sbjct: 237 MMKRSINPDVVTFTALIDVFVK--------------------QGNLDEAQELYKEMIQSS 276
Query: 172 ETPNVVTYSTYIKGLCKAGSL 192
PN VTY++ I GLC G L
Sbjct: 277 VDPNNVTYNSIINGLCMHGRL 297
Score = 65.1 bits (157), Expect = 1e-09
Identities = 54/220 (24%), Positives = 89/220 (39%), Gaps = 32/220 (14%)
Query: 15 SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAI 74
S A+ + ++ + P+VVT++ I K G+L +L M + + NN +N+I
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 75 MYGLCQRGELDEASQVLEEMKSIGILPDVY-----------------GYYVFVNAKDVGI 117
+ GLC G L +A + + M S G P+V G +F G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 118 EVDIMSCNFLLK---------------CLVDANRVGDDDDDDDDDGVSVSVSADISPASE 162
DI + N L+ C + + RV D + V+ +I A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 163 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
F ++ S + +V Y+ I GLCKA + W+L C +
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447
Score = 62.4 bits (150), Expect = 8e-09
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 23/199 (11%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A + F + G PNVVTY+T I G CK + KL M E + +N +++
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANR 136
G CQ G+L A + M S + PD+ + + ++ V E++ F
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF---------- 409
Query: 137 VGDDDDDDDDDGVSVSV---------SAD-ISPASEIFGNIYRSGETPNVVTYSTYIKGL 186
DD + + + + AD + A E+F + G P+ TY+ I GL
Sbjct: 410 ---DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 187 CKAGSLRVVWKLICNMCRE 205
CK G R +LI M E
Sbjct: 467 CKNGPRREADELIRRMKEE 485
Score = 57.8 bits (138), Expect = 2e-07
Identities = 51/207 (24%), Positives = 87/207 (41%), Gaps = 37/207 (17%)
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
D++ A E+F + + G + VTY+T I GL +G +L+ +M + N F
Sbjct: 724 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 783
Query: 73 AIMYGLCQRGELDEASQVLEEMKSIGILPDVYGY-----------------YVFVNAKDV 115
A++ + G L EA + +EM ++P+V+ Y Y+F
Sbjct: 784 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 843
Query: 116 GIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPN 175
G D+++ N L+ + RV +DG+ ++F + G +
Sbjct: 844 GCFPDVVTYNTLITGFCKSKRV--------EDGM------------KLFCEMTYQGLVGD 883
Query: 176 VVTYSTYIKGLCKAGSLRVVWKLICNM 202
TY+T I G C+AG L V K+ M
Sbjct: 884 AFTYNTLIHGYCQAGKLNVAQKVFNRM 910
Score = 57.0 bits (136), Expect = 3e-07
Identities = 50/202 (24%), Positives = 89/202 (43%), Gaps = 7/202 (3%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N +C+ R +S + G G PNVV Y+T I GLCK L ++ M
Sbjct: 681 LNGFCQGNRFQEAVSLVDSMDG----FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 736
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVD 120
++ + +N ++ GL G +A+++L +M I P+V + ++ E +
Sbjct: 737 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT--FVKEGN 794
Query: 121 IMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYS 180
++ L K ++ + V + + + + A +F + G P+VVTY+
Sbjct: 795 LLEARNLYKEMIRRSVVPNVFTYNSLIN-GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 853
Query: 181 TYIKGLCKAGSLRVVWKLICNM 202
T I G CK+ + KL C M
Sbjct: 854 TLITGFCKSKRVEDGMKLFCEM 875
Score = 52.8 bits (125), Expect = 6e-06
Identities = 45/186 (24%), Positives = 80/186 (42%), Gaps = 8/186 (4%)
Query: 9 RCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINN 68
RCS +S A + G + + G P++VT + + G C+ + L+ +M N
Sbjct: 651 RCSR-LSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV 709
Query: 69 HCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA-KDVGIEVDIMS-CNF 126
+N ++ GLC+ +L+ A +V M+ GI D Y ++ + G D
Sbjct: 710 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 769
Query: 127 LLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGL 186
++K +D N + D + ++ A ++ + R PNV TY++ I G
Sbjct: 770 MVKRKIDPNVIFFTALID-----TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824
Query: 187 CKAGSL 192
C G L
Sbjct: 825 CIHGCL 830
Score = 52.0 bits (123), Expect = 1e-05
Identities = 26/90 (28%), Positives = 45/90 (49%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
+ +I A F ++ S + +V Y+ I GLCKA + W+L C + E +
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGIL 100
+ ++ GLC+ G EA +++ MK GI+
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 46.6 bits (109), Expect = 4e-04
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
I A + ++ +S +++TY+ I+GLC+ L+ W L ++ R+ + +
Sbjct: 935 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 994
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILP 101
++ GLC++G EA ++ MK G +P
Sbjct: 995 MISGLCRKGLQREADKLCRRMKEDGFMP 1022
Score = 40.0 bits (92), Expect = 0.040
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 37/128 (28%)
Query: 92 EEMKSIGILPDVYGYYVFVNA-----------------KDVGIEVDIMSCNFLLKCLVDA 134
++M+ GI D+Y + + ++ +G E I++ LL
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 135 NRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRV 194
NR+GD A + + +SG PNVV Y+T I GLCK G L +
Sbjct: 155 NRIGD--------------------AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI 194
Query: 195 VWKLICNM 202
+L+ M
Sbjct: 195 ALELLNEM 202
Score = 33.1 bits (74), Expect = 4.9
Identities = 32/153 (20%), Positives = 56/153 (35%), Gaps = 37/153 (24%)
Query: 53 WKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA 112
+ L C M + + F ++ + + + D + +M+++GI D+Y + + ++
Sbjct: 589 FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHC 648
Query: 113 -----------------KDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSA 155
+G I++ LL NR + VS+ S
Sbjct: 649 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRF--------QEAVSLVDSM 700
Query: 156 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
D G PNVV Y+T I GLCK
Sbjct: 701 D------------GFGFVPNVVIYNTVINGLCK 721
>ref|XP_477613.1| putative fertility restorer homologue [Oryza sativa (japonica
cultivar-group)] gi|50509027|dbj|BAD31989.1| putative
fertility restorer [Oryza sativa (japonica
cultivar-group)] gi|34394343|dbj|BAC84898.1| putative
fertility restorer homologue [Oryza sativa (japonica
cultivar-group)]
Length = 1013
Score = 75.5 bits (184), Expect = 9e-13
Identities = 52/187 (27%), Positives = 88/187 (46%), Gaps = 19/187 (10%)
Query: 27 SGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDE 86
+G +P+V TYST I+ CK K++ M +N +N ++ GLC+ G ++E
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297
Query: 87 ASQVLEEMKSIGILPDVYGYYVFVN-------AKDVGIEVDIMSCNFLL-KCLVDANRVG 138
A ++M+ G++PD + Y +N + + +D MSC L +V AN +
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLI- 356
Query: 139 DDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKL 198
DG +AD A ++ + +G PN +TY ++GLCK G + L
Sbjct: 357 --------DGFMREGNAD--EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406
Query: 199 ICNMCRE 205
+ M R+
Sbjct: 407 LKQMVRD 413
Score = 68.9 bits (167), Expect = 8e-11
Identities = 48/230 (20%), Positives = 100/230 (42%), Gaps = 38/230 (16%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
S + AS++ + G PN Y+ I G C+ G++ + ++ M + N + +C
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 526
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAK----------------- 113
+N++++GL + G ++E+++ +M+ G+LP+ + Y ++
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586
Query: 114 DVGIE------VDIMSCNFLLKCLVDANRVGDDDDDDDDDGV------------SVSVSA 155
D G++ +D++ F D +V D GV ++S S
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSD---DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 643
Query: 156 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 205
++ A + I ++G P+V YS+ I GLCK + ++ M ++
Sbjct: 644 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 693
Score = 66.2 bits (160), Expect = 5e-10
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
S ++ A + I ++G P+V YS+ I GLCK + ++ M ++ N C
Sbjct: 642 SGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 701
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKC 130
+NA++ GLC+ G++ A V + + G++P+ Y + D +V +S F L
Sbjct: 702 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI---DGSCKVGDISNAFYLYN 758
Query: 131 LVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAG 190
+ A + D S + D+ A + ++ G ++ +++ + G CK G
Sbjct: 759 EMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRG 817
Query: 191 SLRVVWKLI 199
++ KL+
Sbjct: 818 KMQETLKLL 826
Score = 61.2 bits (147), Expect = 2e-08
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 37/203 (18%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
AS + + R P+ +TY+ I+G + S + ++L+ M N + ++ +++
Sbjct: 403 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH 462
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGY-----------------YVFVNAKDVGIEV 119
GLCQ GE ++AS +LEEM + G+ P+ + Y +F V +
Sbjct: 463 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 522
Query: 120 DIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTY 179
D+ N L+ L RV + +++ F + G PN TY
Sbjct: 523 DLYCYNSLIFGLSKVGRVEE--------------------STKYFAQMQERGLLPNEFTY 562
Query: 180 STYIKGLCKAGSLRVVWKLICNM 202
S I G K G L +L+ M
Sbjct: 563 SGLIHGYLKNGDLESAEQLVQRM 585
Score = 59.7 bits (143), Expect = 5e-08
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 4/185 (2%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
+AD A I + + G PN+V Y+ I GLCK+G + + ++ + N
Sbjct: 677 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 736
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKC 130
+ +++ G C+ G++ A + EM + GI PD + Y V D+ FL++
Sbjct: 737 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG--CSSAGDLEQAMFLIEE 794
Query: 131 LVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAG 190
+ ++ DG + ++ I G PN +T I GL +AG
Sbjct: 795 MFLRGHASISSFNNLVDGFCKR--GKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAG 852
Query: 191 SLRVV 195
L V
Sbjct: 853 KLSEV 857
Score = 58.9 bits (141), Expect = 8e-08
Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 38/182 (20%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
S DI S F ++ G + Y I L +G++ ++++ + + + H
Sbjct: 607 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 666
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKC 130
+++++ GLC+ + ++A +L+EM G+ P++ Y ++
Sbjct: 667 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID------------------- 707
Query: 131 LVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAG 190
+ S DIS A +F +I G PN VTY++ I G CK G
Sbjct: 708 -------------------GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 748
Query: 191 SL 192
+
Sbjct: 749 DI 750
Score = 58.2 bits (139), Expect = 1e-07
Identities = 39/188 (20%), Positives = 76/188 (39%), Gaps = 38/188 (20%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A ++ + +G PN +TY ++GLCK G + L+ M R++ + +N I+
Sbjct: 368 AFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE 427
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANR 136
G + +A ++L EM++ GI P+VY Y + ++
Sbjct: 428 GHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHG------------------------ 463
Query: 137 VGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVW 196
+ S + AS++ + G PN Y+ I G C+ G++ +
Sbjct: 464 --------------LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509
Query: 197 KLICNMCR 204
++ M +
Sbjct: 510 EIFDKMTK 517
Score = 40.0 bits (92), Expect = 0.040
Identities = 26/84 (30%), Positives = 43/84 (50%), Gaps = 1/84 (1%)
Query: 18 SEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYG 77
S +F ++ G+ P V I+ CK G+L L + ++ P+ + AI+
Sbjct: 877 SSLFMDMINQGKIPLDVV-DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDN 935
Query: 78 LCQRGELDEASQVLEEMKSIGILP 101
LC++G+L EA +L+EM GI P
Sbjct: 936 LCRKGKLSEALNLLKEMDKRGICP 959
Score = 33.1 bits (74), Expect = 4.9
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 9/148 (6%)
Query: 45 KAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVY 104
K+G ++ +++ M + C NA++ L + + +V E M GI PDVY
Sbjct: 186 KSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVY 245
Query: 105 GYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIF 164
Y + A E D K LV+ G + + V ++ E F
Sbjct: 246 TYSTLIEAYCKVREFDTAK-----KVLVEMRERGCGLNTVTYN-VLIAGLCRSGAVEEAF 299
Query: 165 G---NIYRSGETPNVVTYSTYIKGLCKA 189
G ++ G P+ TY I GLCK+
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKS 327
>gb|AAF75798.1| Contains multiple PPR Repeats PF|01535. [Arabidopsis thaliana]
gi|25404374|pir||B96653 hypothetical protein F16P17.1
[imported] - Arabidopsis thaliana
Length = 514
Score = 75.5 bits (184), Expect = 9e-13
Identities = 50/202 (24%), Positives = 95/202 (46%), Gaps = 23/202 (11%)
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
+++ A ++F + +G +P++VT +T + GLC+ G L ++ + ++ N
Sbjct: 246 NVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCN 305
Query: 73 AIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYV----------FVNAKDVGIEVDIM 122
I+ G+C+ ++DEA + + G+ DV Y + F+ A+D+ +E M
Sbjct: 306 IIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLE---M 362
Query: 123 SCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTY 182
C ++ V N + D + A ++ ++ G +P+VVT+ST
Sbjct: 363 LCKGIIPSTVTYNSMVD----------GFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTL 412
Query: 183 IKGLCKAGSLRVVWKLICNMCR 204
IKG CKAG + +L MC+
Sbjct: 413 IKGYCKAGRVDDGLELFSEMCQ 434
Score = 68.2 bits (165), Expect = 1e-10
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 4 YCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN 63
+C+ R + A ++ ++ G +P+VVT+ST IKG CKAG + +L MC+
Sbjct: 381 FCKQNR----LEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 436
Query: 64 QPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPD 102
+ +NA+++G C+ G+L+ A + EEM S G+ PD
Sbjct: 437 LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPD 475
Score = 64.3 bits (155), Expect = 2e-09
Identities = 53/200 (26%), Positives = 82/200 (40%), Gaps = 23/200 (11%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
MN CR+ R + A + + G P+ VTY T + G+CK G ++ M
Sbjct: 17 MNGLCREGR----VLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMD 72
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAK-DVGIEV 119
N ++AI+ LC+ G +A + EM GI P+V Y ++ G
Sbjct: 73 ESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWS 132
Query: 120 DIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSV-------SADISPASEIFGNIYRSGE 172
D LL+ +++ N D D V+ S +S A E++ + R
Sbjct: 133 D---AEQLLRDMIERN--------IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI 181
Query: 173 TPNVVTYSTYIKGLCKAGSL 192
P +TYS+ I G CK L
Sbjct: 182 FPTTITYSSMIDGFCKHSRL 201
Score = 57.8 bits (138), Expect = 2e-07
Identities = 52/238 (21%), Positives = 96/238 (39%), Gaps = 49/238 (20%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN--------QP 65
+S A E++ + R P +TYS+ I G CK L + M +
Sbjct: 166 VSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNT 225
Query: 66 INNHCFNA---IMYGLCQRGELDEASQVLEEMKSIGILPDVYG----------------- 105
+ + C A +++G CQ G ++ A + +EM S G+ PD+
Sbjct: 226 LIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKA 285
Query: 106 ---YYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDD---DGVSVSV------ 153
+ VF +K +++D +CN ++ + N+V + D + +GV V
Sbjct: 286 LEMFKVFQKSK---MDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNIL 342
Query: 154 ------SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 205
+ A +I+ + G P+ VTY++ + G CK L +++ +M E
Sbjct: 343 IGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSE 400
Score = 54.3 bits (129), Expect = 2e-06
Identities = 37/177 (20%), Positives = 71/177 (39%), Gaps = 38/177 (21%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A +I+ + G P+ VTY++ + G CK L +++ +M E + F+ ++
Sbjct: 355 AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 414
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANR 136
G C+ G +D+ ++ EM G++ D Y ++ C V
Sbjct: 415 GYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGF----------------CKV---- 454
Query: 137 VGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLR 193
D++ A +IF + SG P+ +T+ + + GLC L+
Sbjct: 455 ------------------GDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQ 493
Score = 51.2 bits (121), Expect = 2e-05
Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 27/178 (15%)
Query: 15 SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAI 74
S A ++ ++ P+VVT+S I K G + +L M R N ++++
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191
Query: 75 MYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDA 134
+ G C+ L++A + + M S G PD+ ++ C +
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDG----------CCRAKRHLIHGF 241
Query: 135 NRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 192
+VG +++ A ++F + +G +P++VT +T + GLC+ G L
Sbjct: 242 CQVG-----------------NVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKL 282
Score = 43.1 bits (100), Expect = 0.005
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 4 YCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN 63
YC+ R + E+F + + G + +TY+ I G CK G L + M
Sbjct: 416 YCKAGR----VDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSG 471
Query: 64 QPINNHCFNAIMYGLCQRGELDEASQVLEEMK 95
+ F +++ GLC + EL + +LE+++
Sbjct: 472 VCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503
>ref|NP_176474.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 534
Score = 75.5 bits (184), Expect = 9e-13
Identities = 50/202 (24%), Positives = 95/202 (46%), Gaps = 23/202 (11%)
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
+++ A ++F + +G +P++VT +T + GLC+ G L ++ + ++ N
Sbjct: 266 NVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCN 325
Query: 73 AIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYV----------FVNAKDVGIEVDIM 122
I+ G+C+ ++DEA + + G+ DV Y + F+ A+D+ +E M
Sbjct: 326 IIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLE---M 382
Query: 123 SCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTY 182
C ++ V N + D + A ++ ++ G +P+VVT+ST
Sbjct: 383 LCKGIIPSTVTYNSMVD----------GFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTL 432
Query: 183 IKGLCKAGSLRVVWKLICNMCR 204
IKG CKAG + +L MC+
Sbjct: 433 IKGYCKAGRVDDGLELFSEMCQ 454
Score = 68.2 bits (165), Expect = 1e-10
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 4 YCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN 63
+C+ R + A ++ ++ G +P+VVT+ST IKG CKAG + +L MC+
Sbjct: 401 FCKQNR----LEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 456
Query: 64 QPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPD 102
+ +NA+++G C+ G+L+ A + EEM S G+ PD
Sbjct: 457 LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPD 495
Score = 64.3 bits (155), Expect = 2e-09
Identities = 53/200 (26%), Positives = 82/200 (40%), Gaps = 23/200 (11%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
MN CR+ R + A + + G P+ VTY T + G+CK G ++ M
Sbjct: 17 MNGLCREGR----VLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMD 72
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAK-DVGIEV 119
N ++AI+ LC+ G +A + EM GI P+V Y ++ G
Sbjct: 73 ESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWS 132
Query: 120 DIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSV-------SADISPASEIFGNIYRSGE 172
D LL+ +++ N D D V+ S +S A E++ + R
Sbjct: 133 D---AEQLLRDMIERN--------IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI 181
Query: 173 TPNVVTYSTYIKGLCKAGSL 192
P +TYS+ I G CK L
Sbjct: 182 FPTTITYSSMIDGFCKHSRL 201
Score = 63.9 bits (154), Expect = 3e-09
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 46/237 (19%)
Query: 4 YCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN 63
+C+ R + A +F + G +P+++T +T I G C+A + KL+ M R
Sbjct: 195 FCKHSR----LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRVDDGMKLLHEMSRRG 250
Query: 64 QPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYG------------------ 105
+ H +++G CQ G ++ A + +EM S G+ PD+
Sbjct: 251 LVPDTH----LIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKAL 306
Query: 106 --YYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDD---DGVSVSV------- 153
+ VF +K +++D +CN ++ + N+V + D + +GV V
Sbjct: 307 EMFKVFQKSK---MDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILI 363
Query: 154 -----SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 205
+ A +I+ + G P+ VTY++ + G CK L +++ +M E
Sbjct: 364 GVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSE 420
Score = 56.2 bits (134), Expect = 5e-07
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 7/178 (3%)
Query: 15 SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAI 74
S A ++ ++ P+VVT+S I K G + +L M R N ++++
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191
Query: 75 MYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDA 134
+ G C+ L++A + + M S G PD+ ++ VD +K L +
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRVDDG-----MKLLHEM 246
Query: 135 NRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 192
+R G D G +++ A ++F + +G +P++VT +T + GLC+ G L
Sbjct: 247 SRRGLVPDTHLIHG--FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKL 302
Score = 54.3 bits (129), Expect = 2e-06
Identities = 37/177 (20%), Positives = 71/177 (39%), Gaps = 38/177 (21%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A +I+ + G P+ VTY++ + G CK L +++ +M E + F+ ++
Sbjct: 375 AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 434
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANR 136
G C+ G +D+ ++ EM G++ D Y ++ C V
Sbjct: 435 GYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGF----------------CKV---- 474
Query: 137 VGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLR 193
D++ A +IF + SG P+ +T+ + + GLC L+
Sbjct: 475 ------------------GDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQ 513
Score = 43.1 bits (100), Expect = 0.005
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 4 YCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN 63
YC+ R + E+F + + G + +TY+ I G CK G L + M
Sbjct: 436 YCKAGR----VDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSG 491
Query: 64 QPINNHCFNAIMYGLCQRGELDEASQVLEEMK 95
+ F +++ GLC + EL + +LE+++
Sbjct: 492 VCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 523
>ref|NP_909693.1| putative pentatricopeptide repeat protein [Oryza sativa (japonica
cultivar-group)] gi|28875991|gb|AAO60000.1| putative
pentatricopeptide repeat protein [Oryza sativa (japonica
cultivar-group)]
Length = 742
Score = 75.1 bits (183), Expect = 1e-12
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A +F + SG TP+ VTY+T I LC G L L+ +M P + +N I+
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN--AKDVGIEVDIMSCNFLLKCLVDA 134
GLC++ ++EA +V ++M GI + + ++ KD I+ N ++ +
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQP 529
Query: 135 NRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRV 194
N + + DI A++I + +G +VVTY T I GLCKAG +V
Sbjct: 530 NNI-----TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584
Query: 195 VWKLICNM 202
K++ M
Sbjct: 585 ALKVLRGM 592
Score = 70.9 bits (172), Expect = 2e-11
Identities = 52/188 (27%), Positives = 85/188 (44%), Gaps = 11/188 (5%)
Query: 5 CRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQ 64
C+ +R I A E+F + G + N +T++T I GLCK + ++LI M E
Sbjct: 472 CKKMR----IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527
Query: 65 PINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSC 124
NN +N+I+ C++G++ +A+ +LE M + G DV Y +N +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV--- 584
Query: 125 NFLLKCLVDANRVGDDDDDDDDDGVSVSV--SADISPASEIFGNIYRSGETPNVVTYSTY 182
LK L G + V S+ +I A +F + GE P+ +TY
Sbjct: 585 --ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 642
Query: 183 IKGLCKAG 190
+GLC+ G
Sbjct: 643 FRGLCRGG 650
Score = 70.1 bits (170), Expect = 4e-11
Identities = 51/180 (28%), Positives = 85/180 (46%), Gaps = 13/180 (7%)
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G P+ +TY+T++ GLC+ + K++ M +E + +N ++ LC+ G+L+EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 88 SQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDD 147
+L +M G LPD+ + + A G N L + L A +V D
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTG--------NRLEEALDLARQVTVKGVSPDVY 392
Query: 148 GVSVSVSA-----DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
++ ++A D A +F + SG TP+ VTY+T I LC G L L+ +M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452
Score = 66.6 bits (161), Expect = 4e-10
Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 45/235 (19%)
Query: 10 CSAD-ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINN 68
C D + A ++ + + G P+V TY+ + LCK G L ++ NQ ++
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL------NQMVDR 350
Query: 69 HC------FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA---------- 112
C FN ++ LC L+EA + ++ G+ PDVY + + +NA
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410
Query: 113 -------KDVGIEVDIMSCNFLLKCLVDANRVGDDDD---DDDDDGVSVSV--------- 153
K+ G D ++ N L+ L ++G D D + G S
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470
Query: 154 ---SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 205
I A E+F + G + N +T++T I GLCK + ++LI M E
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525
Score = 57.4 bits (137), Expect = 2e-07
Identities = 32/108 (29%), Positives = 52/108 (47%), Gaps = 4/108 (3%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+ YC+ DI A++I + +G +VVTY T I GLCKAG +V K++ M
Sbjct: 538 LTHYCKQ----GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYV 108
+ +N ++ L +R + +A + EM +G PD Y +
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKI 641
Score = 48.5 bits (114), Expect = 1e-04
Identities = 41/190 (21%), Positives = 72/190 (37%), Gaps = 37/190 (19%)
Query: 20 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLC 79
++ + G P+VVT++T +K LC+A +R ++ M + F +M G
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227
Query: 80 QRGELDEASQVLEEMKSIGILPD-------VYGYYVFVNAKDV----------GIEVDIM 122
+ G ++ A +V M +G + GY +D G E D +
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 123 SCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTY 182
+ N + L + VG A ++ + + G P+V TY+
Sbjct: 288 TYNTFVNGLCQNDHVGH--------------------ALKVMDVMVQEGHDPDVFTYNIV 327
Query: 183 IKGLCKAGSL 192
+ LCK G L
Sbjct: 328 VNCLCKNGQL 337
Score = 32.3 bits (72), Expect = 8.4
Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 38/169 (22%)
Query: 26 RSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELD 85
R P Y I+ L G+L ++ L+ M RE + ++ + + D
Sbjct: 67 RDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFD 126
Query: 86 EASQ-VLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDD 144
+A +L +++ + GI+ D + N LL LV+ +++
Sbjct: 127 DAVDLILNQLQPL-----------------FGIQADTVVYNHLLNVLVEGSKM------- 162
Query: 145 DDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLR 193
++ + G P+VVT++T +K LC+A +R
Sbjct: 163 -------------KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198
>dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa (japonica
cultivar-group)]
Length = 713
Score = 75.1 bits (183), Expect = 1e-12
Identities = 56/211 (26%), Positives = 96/211 (44%), Gaps = 32/211 (15%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A ++F + G N TY+ I G CKAG L L+ M R+ P+N +
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPD-------VYGYYVFVNA----------KDVG 116
++ GLC+ ++ EA VL M+ G+ + ++G+++ N+ K+ G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 117 IEVDIMSCNFLLKCLVDANRVGDDDD---DDDDDGVSVSV------------SADISPAS 161
+E+DI L++ L + +++ + D+ G+ + S + A
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488
Query: 162 EIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 192
+ I SG PNV+TY I GLCKAGS+
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSI 519
Score = 60.5 bits (145), Expect = 3e-08
Identities = 53/202 (26%), Positives = 89/202 (43%), Gaps = 35/202 (17%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
++F C++ +++ A +F + G P+VVT+++ I G K G L V +L+ M
Sbjct: 195 IDFLCKE----GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA--KD---- 114
R + +NA++ C+ G ++ A MK G++ +V + FV+A K+
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 115 ------VGIEVDIMSCN-FLLKCLVDAN-RVGDDDDDDDDDGVSVSVSADISPASEIFGN 166
+ V M+ N F CL+D + G DD A +
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD-----------------AIVLLDE 353
Query: 167 IYRSGETPNVVTYSTYIKGLCK 188
+ R G NVVTY+ + GLCK
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCK 375
Score = 59.3 bits (142), Expect = 6e-08
Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 43/190 (22%)
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINN-HCFNAIMYGLCQRGELDEASQ 89
PN T + + L + S R+V +L E P N FN ++ LC+ GEL EA
Sbjct: 155 PNTRTCNHILLRLARDRSGRLVRRLF-----EQLPAPNVFTFNIVIDFLCKEGELAEARS 209
Query: 90 VLEEMKSIGILPDVYGYYVFVNA-----------------KDVGIEVDIMSCNFLLKCLV 132
+ MK +G LPDV + ++ + G + D+++ N L+ C
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269
Query: 133 DANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 192
R + A F + R G NVVT+ST++ CK G +
Sbjct: 270 KFGR--------------------METAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 193 RVVWKLICNM 202
R KL M
Sbjct: 310 REAMKLFAQM 319
Score = 53.5 bits (127), Expect = 4e-06
Identities = 48/199 (24%), Positives = 74/199 (37%), Gaps = 37/199 (18%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
S + A + I SG PNV+TY I GLCKAGS+ M N
Sbjct: 481 SGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAK----------------- 113
+ A++ GLC+ G L+EA Q+ EM G+ D Y ++
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600
Query: 114 DVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGET 173
D G+++D+ + + N + + A E+F + G
Sbjct: 601 DSGLQLDLFCYTCFISGFCNLNMMPE--------------------AREVFSEMIGHGIA 640
Query: 174 PNVVTYSTYIKGLCKAGSL 192
P+ Y+ I K G+L
Sbjct: 641 PDRAVYNCLISKYQKLGNL 659
Score = 48.1 bits (113), Expect = 1e-04
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 4 YCR--DVRCSA-DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
YC D C A I A F + G PNV Y+ + GLCK G L +L M
Sbjct: 506 YCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMV 565
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN 111
+ ++ + A++ G ++G L +A + +M G+ D++ Y F++
Sbjct: 566 HKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFIS 616
Score = 43.1 bits (100), Expect = 0.005
Identities = 35/189 (18%), Positives = 70/189 (36%), Gaps = 38/189 (20%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A + + SG PN + Y+T + K+G + ++ + N + A
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVD 133
++ GLC+ G +DEA +M+ +G+ P+V Y V+
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG--------------------- 547
Query: 134 ANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLR 193
+ + ++ A ++F + G + + V Y+ + G K G+L
Sbjct: 548 -----------------LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLH 590
Query: 194 VVWKLICNM 202
+ L M
Sbjct: 591 DAFALKAKM 599
>gb|AAF78482.1| Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene gi|25518293|pir||A86261 hypothetical
protein F13K23.2 - Arabidopsis thaliana
Length = 644
Score = 74.7 bits (182), Expect = 1e-12
Identities = 58/215 (26%), Positives = 91/215 (41%), Gaps = 41/215 (19%)
Query: 5 CRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQ 64
C+D + A +F + G +++TY+T I G C AG KL+ +M +
Sbjct: 274 CKD----GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 65 PINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA------------ 112
N F+ ++ + G+L EA Q+L+EM GI P+ Y ++
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 113 -----KDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNI 167
G + DIM+ N L+ ANR+ DDG+ E+F +
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRI--------DDGL------------ELFREM 429
Query: 168 YRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
G N VTY+T ++G C++G L V KL M
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Score = 62.8 bits (151), Expect = 6e-09
Identities = 51/205 (24%), Positives = 89/205 (42%), Gaps = 32/205 (15%)
Query: 30 TPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQ 89
+PNVVT+S I K G LR +L+ M + N +N+++ G C+ L+EA Q
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 90 VLEEMKSIGILPDVYGYYVFVNAK------DVGIEV-----------DIMSCNFLLKCLV 132
+++ M S G PD+ + + +N D G+E+ + ++ N L++
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 133 DANRVGDDDDDDDD--------DGVSVSVSAD-------ISPASEIFGNIYRSGETPNVV 177
+ ++ + D VS + D + A EIFG I +S ++
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 178 TYSTYIKGLCKAGSLRVVWKLICNM 202
Y I G+C A + W L C++
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSL 534
Score = 57.0 bits (136), Expect = 3e-07
Identities = 52/231 (22%), Positives = 93/231 (39%), Gaps = 36/231 (15%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N C + R +S A E+ + G P ++T +T + GLC G + LI M
Sbjct: 165 LNGLCLECR----VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN--AKD---- 114
N + ++ +C+ G+ A ++L +M+ I D Y + ++ KD
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 115 -----------VGIEVDIMSCNFLLKCLVDANRVGDDDDDDDD--------DGVSVSVSA 155
G + DI++ N L+ +A R D D + V+ SV
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 156 D-------ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLI 199
D + A ++ + + G PN +TY++ I G CK L +++
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Score = 56.2 bits (134), Expect = 5e-07
Identities = 46/193 (23%), Positives = 86/193 (43%), Gaps = 25/193 (12%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N YC+ R I E+F + G N VTY+T ++G C++G L V KL M
Sbjct: 410 INGYCKANR----IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVD 120
+ + ++ GLC GEL++A ++ +++ + D+ Y + ++ +VD
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 121 ---IMSCNFLLKCL-VDANRVGDDDDDDDDDGVSVSVSA-----DISPASEIFGNIYRSG 171
+ C+ LK + +DA ++ +S +S A +F + G
Sbjct: 526 DAWDLFCSLPLKGVKLDAR------------AYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 172 ETPNVVTYSTYIK 184
P+ +TY+ I+
Sbjct: 574 HAPDELTYNILIR 586
Score = 53.5 bits (127), Expect = 4e-06
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 15/208 (7%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N +CR +S A G I + G P+ V ++T + GLC + +L+ M
Sbjct: 130 INCFCR----CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPD--VYGYYVFVNAK--DVG 116
N ++ GLC G++ +A +++ M G P+ YG + V K
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 117 IEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNV 176
+ ++++ +DA + D DG + A +F + G ++
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDG-------SLDNAFNLFNEMEIKGFKADI 298
Query: 177 VTYSTYIKGLCKAGSLRVVWKLICNMCR 204
+TY+T I G C AG KL+ +M +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Score = 53.1 bits (126), Expect = 5e-06
Identities = 26/102 (25%), Positives = 49/102 (47%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
+ ++ A EIFG I +S ++ Y I G+C A + W L C++ + ++
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA 112
+N ++ LC++ L +A + +M G PD Y + + A
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 37.4 bits (85), Expect = 0.26
Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 38/175 (21%)
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G ++ T S I C+ L + + + + + FN ++ GLC + EA
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 88 SQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDD 147
++++ M +G P + VN
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVN------------------------------------ 201
Query: 148 GVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
+ ++ +S A + + +G PN VTY + +CK+G + +L+ M
Sbjct: 202 --GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
>gb|AAF75801.1| Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. [Arabidopsis thaliana] gi|25404377|pir||F96653
hypothetical protein F16P17.5 [imported] - Arabidopsis
thaliana
Length = 632
Score = 74.7 bits (182), Expect = 1e-12
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 38/172 (22%)
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
PNVVTYST IKG CKA + +L M + N + +++G Q + D A V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 91 LEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVS 150
++M S+G+ P++ Y N LL DG+
Sbjct: 456 FKQMVSVGVHPNILTY------------------NILL------------------DGLC 479
Query: 151 VSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
+ ++ A +F + RS P++ TY+ I+G+CKAG + W+L CN+
Sbjct: 480 KN--GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Score = 69.7 bits (169), Expect = 5e-11
Identities = 32/100 (32%), Positives = 57/100 (57%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
++ A +F + RS P++ TY+ I+G+CKAG + W+L CN+ + N +N
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAK 113
++ G C++G +EA +L++MK G LP+ Y + A+
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Score = 67.4 bits (163), Expect = 2e-10
Identities = 53/208 (25%), Positives = 90/208 (42%), Gaps = 34/208 (16%)
Query: 15 SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAI 74
S A + + + G P++VTY T + GLCK G + + L+ M + + +N I
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 75 MYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAK-----------------DVGI 117
+ GLC+ +D+A + EM + GI PDV+ Y ++ + I
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 118 EVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADI----------------SPAS 161
++++ + L+ V ++ + + D+ + S+ DI A
Sbjct: 325 NPNVVTFSALIDAFVKEGKL-VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 162 EIFGNIYRSGETPNVVTYSTYIKGLCKA 189
+F + PNVVTYST IKG CKA
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKA 411
Score = 59.3 bits (142), Expect = 6e-08
Identities = 44/178 (24%), Positives = 72/178 (39%), Gaps = 38/178 (21%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ E+F + + G N VTY+T I G +A + M N +N
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVD 133
++ GLC+ G+L +A V E ++ + PD+Y Y N +++ +
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY------------------NIMIEGMCK 515
Query: 134 ANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGS 191
A +V D E+F N+ G +PNV+ Y+T I G C+ GS
Sbjct: 516 AGKVED--------------------GWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Score = 53.1 bits (126), Expect = 5e-06
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 11/204 (5%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N +CR + +S A + + + G P++VT S+ + G C + + L+ M
Sbjct: 125 INCFCR----RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN--AKDVGIE 118
+ F +++GL + EA ++++M G PD+ Y VN K I+
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 119 VDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVT 178
+ + + K ++A+ V + D + + A +F + G P+V T
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIID-----GLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 179 YSTYIKGLCKAGSLRVVWKLICNM 202
YS+ I LC G +L+ +M
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDM 319
Score = 51.6 bits (122), Expect = 1e-05
Identities = 24/84 (28%), Positives = 46/84 (54%)
Query: 19 EIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGL 78
E+F N+ G +PNV+ Y+T I G C+ GS L+ M + N+ +N ++
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 79 CQRGELDEASQVLEEMKSIGILPD 102
+ G+ + ++++++EM+S G D
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGD 607
Score = 47.0 bits (110), Expect = 3e-04
Identities = 41/206 (19%), Positives = 80/206 (37%), Gaps = 37/206 (17%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A ++FG++ +S P++V ++ + + K +V L M + + ++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA-----------------KDVG 116
+ C+R +L A VL +M +G PD+ +N ++G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 117 IEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNV 176
+ D + L+ L N+ S A + + + G P++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKA--------------------SEAVALVDQMVQRGCQPDL 223
Query: 177 VTYSTYIKGLCKAGSLRVVWKLICNM 202
VTY T + GLCK G + + L+ M
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKM 249
>ref|NP_176479.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 1133
Score = 74.7 bits (182), Expect = 1e-12
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
PNVVTYST IKG CKA + +L M + N + +++G Q + D A V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 91 LEEMKSIGILPDVYGY-----------------YVFVNAKDVGIEVDIMSCNFLLKCLVD 133
++M S+G+ P++ Y VF + +E DI + N +++ +
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 134 ANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGS 191
A +V D E+F N+ G +PNV+ Y+T I G C+ GS
Sbjct: 516 AGKVED--------------------GWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Score = 69.7 bits (169), Expect = 5e-11
Identities = 32/100 (32%), Positives = 57/100 (57%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
++ A +F + RS P++ TY+ I+G+CKAG + W+L CN+ + N +N
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAK 113
++ G C++G +EA +L++MK G LP+ Y + A+
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Score = 67.4 bits (163), Expect = 2e-10
Identities = 53/208 (25%), Positives = 90/208 (42%), Gaps = 34/208 (16%)
Query: 15 SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAI 74
S A + + + G P++VTY T + GLCK G + + L+ M + + +N I
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 75 MYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAK-----------------DVGI 117
+ GLC+ +D+A + EM + GI PDV+ Y ++ + I
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 118 EVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADI----------------SPAS 161
++++ + L+ V ++ + + D+ + S+ DI A
Sbjct: 325 NPNVVTFSALIDAFVKEGKL-VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 162 EIFGNIYRSGETPNVVTYSTYIKGLCKA 189
+F + PNVVTYST IKG CKA
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKA 411
Score = 62.8 bits (151), Expect = 6e-09
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 41/199 (20%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A +++ + + PN+ TYS+ I G C L +++ M R++ N +N ++
Sbjct: 947 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 1006
Query: 77 GLCQRGELDEASQVLEEMKSIGILPD-------VYGYY----------VFVNAKDVGIEV 119
G C+ +D+ ++ EM G++ + ++G++ VF VG+
Sbjct: 1007 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 1066
Query: 120 DIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTY 179
+I++ N LL DG + + ++ A +F + RS P++ TY
Sbjct: 1067 NILTYNILL------------------DG--LCKNGKLAKAMVVFEYLQRSTMEPDIYTY 1106
Query: 180 STYIKGLCKAGSLRVVWKL 198
+ I+G+CKAG WK+
Sbjct: 1107 NIMIEGMCKAGK----WKM 1121
Score = 59.3 bits (142), Expect = 6e-08
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 17/185 (9%)
Query: 15 SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAI 74
S AS + ++ PN+VT+S I K G L KL M + + N ++++
Sbjct: 910 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 969
Query: 75 MYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDA 134
+ G C L EA Q+LE M LP+V Y +N VD L + +
Sbjct: 970 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD--KGMELFREMSQR 1027
Query: 135 NRVGDDDDDDDDDGVSVSV-------SADISPASEIFGNIYRSGETPNVVTYSTYIKGLC 187
VG+ V+ + + D A +F + G PN++TY+ + GLC
Sbjct: 1028 GLVGNT--------VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 1079
Query: 188 KAGSL 192
K G L
Sbjct: 1080 KNGKL 1084
Score = 58.5 bits (140), Expect = 1e-07
Identities = 50/204 (24%), Positives = 86/204 (41%), Gaps = 11/204 (5%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N +CR CS +S A + G + + G P++VT ++ + G C + L+ M
Sbjct: 725 INCFCR---CSR-LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 780
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN--AKDVGIE 118
+ F +++GL + EA +++ M G PD+ Y VN K +
Sbjct: 781 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 840
Query: 119 VDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVT 178
+ + N + ++AN V D S+ A +F + G PNV+T
Sbjct: 841 LALNLLNKMEAAKIEANVVIYSTVID-----SLCKYRHEDDALNLFTEMENKGVRPNVIT 895
Query: 179 YSTYIKGLCKAGSLRVVWKLICNM 202
YS+ I LC G +L+ +M
Sbjct: 896 YSSLISCLCNYGRWSDASRLLSDM 919
Score = 55.1 bits (131), Expect = 1e-06
Identities = 47/200 (23%), Positives = 84/200 (41%), Gaps = 21/200 (10%)
Query: 15 SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAI 74
S A + + + G P++VTY + GLCK G + L+ M N ++ +
Sbjct: 805 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 864
Query: 75 MYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDA 134
+ LC+ D+A + EM++ G+ P+V Y ++SC DA
Sbjct: 865 IDSLCKYRHEDDALNLFTEMENKGVRPNVITY------------SSLISCLCNYGRWSDA 912
Query: 135 NRVGDDDDDDDDDGVSVSVSADIS---------PASEIFGNIYRSGETPNVVTYSTYIKG 185
+R+ D + + V+ SA I A +++ + + PN+ TYS+ I G
Sbjct: 913 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 972
Query: 186 LCKAGSLRVVWKLICNMCRE 205
C L +++ M R+
Sbjct: 973 FCMLDRLGEAKQMLELMIRK 992
Score = 53.1 bits (126), Expect = 5e-06
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 11/204 (5%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N +CR + +S A + + + G P++VT S+ + G C + + L+ M
Sbjct: 125 INCFCR----RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN--AKDVGIE 118
+ F +++GL + EA ++++M G PD+ Y VN K I+
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 119 VDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVT 178
+ + + K ++A+ V + D + + A +F + G P+V T
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIID-----GLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 179 YSTYIKGLCKAGSLRVVWKLICNM 202
YS+ I LC G +L+ +M
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDM 319
Score = 51.6 bits (122), Expect = 1e-05
Identities = 24/84 (28%), Positives = 46/84 (54%)
Query: 19 EIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGL 78
E+F N+ G +PNV+ Y+T I G C+ GS L+ M + N+ +N ++
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 79 CQRGELDEASQVLEEMKSIGILPD 102
+ G+ + ++++++EM+S G D
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGD 607
Score = 47.0 bits (110), Expect = 3e-04
Identities = 41/206 (19%), Positives = 80/206 (37%), Gaps = 37/206 (17%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A ++FG++ +S P++V ++ + + K +V L M + + ++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA-----------------KDVG 116
+ C+R +L A VL +M +G PD+ +N ++G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 117 IEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNV 176
+ D + L+ L N+ S A + + + G P++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKA--------------------SEAVALVDQMVQRGCQPDL 223
Query: 177 VTYSTYIKGLCKAGSLRVVWKLICNM 202
VTY T + GLCK G + + L+ M
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKM 249
Score = 40.0 bits (92), Expect = 0.040
Identities = 36/164 (21%), Positives = 64/164 (38%), Gaps = 32/164 (19%)
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA-----------------K 113
F+ ++ + + + D E+M+ +GI ++Y Y + +N
Sbjct: 686 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 745
Query: 114 DVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDD--------DGVSVS-------VSADIS 158
+G E DI++ N LL NR+ D D D V+ + + S
Sbjct: 746 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 805
Query: 159 PASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
A + + + G P++VTY + GLCK G + L+ M
Sbjct: 806 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 849
Score = 40.0 bits (92), Expect = 0.040
Identities = 19/71 (26%), Positives = 35/71 (48%)
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
D A +F + G PN++TY+ + GLCK G L + + R + + +N
Sbjct: 1048 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 1107
Query: 73 AIMYGLCQRGE 83
++ G+C+ G+
Sbjct: 1108 IMIEGMCKAGK 1118
Score = 33.1 bits (74), Expect = 4.9
Identities = 15/42 (35%), Positives = 25/42 (58%), Gaps = 4/42 (9%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKL 55
++ A +F + RS P++ TY+ I+G+CKAG WK+
Sbjct: 1084 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK----WKM 1121
>ref|NP_172737.1| DEAD/DEAH box helicase family protein / pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 1145
Score = 74.7 bits (182), Expect = 1e-12
Identities = 58/215 (26%), Positives = 91/215 (41%), Gaps = 41/215 (19%)
Query: 5 CRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQ 64
C+D + A +F + G +++TY+T I G C AG KL+ +M +
Sbjct: 775 CKD----GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 830
Query: 65 PINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA------------ 112
N F+ ++ + G+L EA Q+L+EM GI P+ Y ++
Sbjct: 831 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 890
Query: 113 -----KDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNI 167
G + DIM+ N L+ ANR+ DDG+ E+F +
Sbjct: 891 MVDLMISKGCDPDIMTFNILINGYCKANRI--------DDGL------------ELFREM 930
Query: 168 YRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
G N VTY+T ++G C++G L V KL M
Sbjct: 931 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 965
Score = 62.8 bits (151), Expect = 6e-09
Identities = 51/205 (24%), Positives = 89/205 (42%), Gaps = 32/205 (15%)
Query: 30 TPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQ 89
+PNVVT+S I K G LR +L+ M + N +N+++ G C+ L+EA Q
Sbjct: 831 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 890
Query: 90 VLEEMKSIGILPDVYGYYVFVNAK------DVGIEV-----------DIMSCNFLLKCLV 132
+++ M S G PD+ + + +N D G+E+ + ++ N L++
Sbjct: 891 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 950
Query: 133 DANRVGDDDDDDDD--------DGVSVSVSAD-------ISPASEIFGNIYRSGETPNVV 177
+ ++ + D VS + D + A EIFG I +S ++
Sbjct: 951 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 1010
Query: 178 TYSTYIKGLCKAGSLRVVWKLICNM 202
Y I G+C A + W L C++
Sbjct: 1011 IYMIIIHGMCNASKVDDAWDLFCSL 1035
Score = 57.0 bits (136), Expect = 3e-07
Identities = 52/231 (22%), Positives = 93/231 (39%), Gaps = 36/231 (15%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N C + R +S A E+ + G P ++T +T + GLC G + LI M
Sbjct: 666 LNGLCLECR----VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 721
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN--AKD---- 114
N + ++ +C+ G+ A ++L +M+ I D Y + ++ KD
Sbjct: 722 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 781
Query: 115 -----------VGIEVDIMSCNFLLKCLVDANRVGDDDDDDDD--------DGVSVSVSA 155
G + DI++ N L+ +A R D D + V+ SV
Sbjct: 782 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 841
Query: 156 D-------ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLI 199
D + A ++ + + G PN +TY++ I G CK L +++
Sbjct: 842 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 892
Score = 56.2 bits (134), Expect = 5e-07
Identities = 46/193 (23%), Positives = 86/193 (43%), Gaps = 25/193 (12%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N YC+ R I E+F + G N VTY+T ++G C++G L V KL M
Sbjct: 911 INGYCKANR----IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 966
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVD 120
+ + ++ GLC GEL++A ++ +++ + D+ Y + ++ +VD
Sbjct: 967 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 1026
Query: 121 ---IMSCNFLLKCL-VDANRVGDDDDDDDDDGVSVSVSA-----DISPASEIFGNIYRSG 171
+ C+ LK + +DA ++ +S +S A +F + G
Sbjct: 1027 DAWDLFCSLPLKGVKLDAR------------AYNIMISELCRKDSLSKADILFRKMTEEG 1074
Query: 172 ETPNVVTYSTYIK 184
P+ +TY+ I+
Sbjct: 1075 HAPDELTYNILIR 1087
Score = 53.5 bits (127), Expect = 4e-06
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 15/208 (7%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N +CR +S A G I + G P+ V ++T + GLC + +L+ M
Sbjct: 631 INCFCR----CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 686
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPD--VYGYYVFVNAK--DVG 116
N ++ GLC G++ +A +++ M G P+ YG + V K
Sbjct: 687 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 746
Query: 117 IEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNV 176
+ ++++ +DA + D DG + A +F + G ++
Sbjct: 747 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDG-------SLDNAFNLFNEMEIKGFKADI 799
Query: 177 VTYSTYIKGLCKAGSLRVVWKLICNMCR 204
+TY+T I G C AG KL+ +M +
Sbjct: 800 ITYNTLIGGFCNAGRWDDGAKLLRDMIK 827
Score = 53.1 bits (126), Expect = 5e-06
Identities = 26/102 (25%), Positives = 49/102 (47%)
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
+ ++ A EIFG I +S ++ Y I G+C A + W L C++ + ++
Sbjct: 987 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 1046
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA 112
+N ++ LC++ L +A + +M G PD Y + + A
Sbjct: 1047 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 1088
Score = 37.4 bits (85), Expect = 0.26
Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 38/175 (21%)
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G ++ T S I C+ L + + + + + FN ++ GLC + EA
Sbjct: 619 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 678
Query: 88 SQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDD 147
++++ M +G P + VN
Sbjct: 679 LELVDRMVEMGHKPTLITLNTLVN------------------------------------ 702
Query: 148 GVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
+ ++ +S A + + +G PN VTY + +CK+G + +L+ M
Sbjct: 703 --GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 755
>dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa (japonica cultivar-group)]
Length = 845
Score = 74.7 bits (182), Expect = 1e-12
Identities = 48/202 (23%), Positives = 93/202 (45%), Gaps = 7/202 (3%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
++F CR+ + A E+ ++ G P VVT + I CK G + +++ M
Sbjct: 296 VDFRCRERKAKE----AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 351
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVD 120
N +NA++ G C G++ +A +L +M++ G+ PD Y + + + + ++
Sbjct: 352 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 411
Query: 121 IMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYS 180
F L L++ + + D + ++ A +F ++ G PN VT++
Sbjct: 412 ---SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 468
Query: 181 TYIKGLCKAGSLRVVWKLICNM 202
+ I GLCK+G + WK + M
Sbjct: 469 SLINGLCKSGKADIAWKFLEKM 490
Score = 60.8 bits (146), Expect = 2e-08
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 7/188 (3%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N YC++ R +S A + + G PNV TY+ ++G C G + L+ M
Sbjct: 331 INAYCKEGR----MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVD 120
+ +N ++ G C G ++ A ++L M+ G++ D Y Y +NA D
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446
Query: 121 IMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYS 180
+C+ + + +G+ S ADI A + + +G TP+ TYS
Sbjct: 447 -QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI--AWKFLEKMVSAGCTPDTYTYS 503
Query: 181 TYIKGLCK 188
++I+ LCK
Sbjct: 504 SFIEHLCK 511
Score = 60.1 bits (144), Expect = 4e-08
Identities = 53/206 (25%), Positives = 87/206 (41%), Gaps = 25/206 (12%)
Query: 4 YCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCREN 63
YCR + + A ++F + G +VV+Y+T I+GLC+AG + +L M +
Sbjct: 198 YCR----TNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM---D 250
Query: 64 QPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN-------AKDVG 116
QP + H + A++ GLC +E +L MK +G P Y V+ AK+
Sbjct: 251 QP-DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAE 309
Query: 117 IEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNV 176
+ M L C+V V + + +S A + + G PNV
Sbjct: 310 EMLQEMFEKGLAPCVVTCTAVIN----------AYCKEGRMSDALRVLELMKLRGCKPNV 359
Query: 177 VTYSTYIKGLCKAGSLRVVWKLICNM 202
TY+ ++G C G + L+ M
Sbjct: 360 WTYNALVQGFCNEGKVHKAMTLLNKM 385
Score = 56.2 bits (134), Expect = 5e-07
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 42/204 (20%)
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
+N C+D R A +F ++ G PN VT+++ I GLCK+G + WK + M
Sbjct: 436 INALCKDGRTDQ----ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 491
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVD 120
+ + +++ + LC+ E + EM + P Y + ++
Sbjct: 492 SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH--------- 542
Query: 121 IMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYS 180
K L + N + +G + SG P+VVTY+
Sbjct: 543 --------KLLKERN---------------------YGLVARTWGEMVSSGCNPDVVTYT 573
Query: 181 TYIKGLCKAGSLRVVWKLICNMCR 204
T ++ C G L ++ M +
Sbjct: 574 TSMRAYCIEGRLNEAENVLMEMSK 597
Score = 55.5 bits (132), Expect = 9e-07
Identities = 41/182 (22%), Positives = 79/182 (42%), Gaps = 21/182 (11%)
Query: 21 FGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQ 80
+G + SG P+VVTY+T ++ C G L ++ M + ++ +N +M G
Sbjct: 557 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 616
Query: 81 RGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDD 140
G+ D A +L++M S+ +P+ + Y++ LL+ LV V
Sbjct: 617 IGQTDHAVSILKQMTSVASVPNQFTYFI------------------LLRHLVRMRLV--- 655
Query: 141 DDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLIC 200
+D V + +++ +F + ++ PN TYS+ ++G + G L+
Sbjct: 656 EDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVS 715
Query: 201 NM 202
M
Sbjct: 716 LM 717
Score = 48.5 bits (114), Expect = 1e-04
Identities = 38/174 (21%), Positives = 70/174 (39%), Gaps = 43/174 (24%)
Query: 17 ASEIFGNIYRSGE-TPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIM 75
A +F +++R P TY+ I+ LC+ L + + M R + + FN+++
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195
Query: 76 YGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDAN 135
G C+ ++D A + ++M G DV Y L++ L +A
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAT------------------LIEGLCEAG 237
Query: 136 RVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKA 189
R+ + A E+FG + + P++ Y+ +KGLC A
Sbjct: 238 RIDE--------------------AVELFGEM----DQPDMHMYAALVKGLCNA 267
Score = 34.7 bits (78), Expect = 1.7
Identities = 28/119 (23%), Positives = 50/119 (41%), Gaps = 17/119 (14%)
Query: 27 SGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDE 86
+G TP+ TYS++I+ LCK + I M +++ + + +++ L +
Sbjct: 493 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 552
Query: 87 ASQVLEEMKSIGILPDVYGYYVFVNAKDV-----------------GIEVDIMSCNFLL 128
++ EM S G PDV Y + A + G+ VD M+ N L+
Sbjct: 553 VARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 611
>gb|AAM93691.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|31432889|gb|AAP54465.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|37535752|ref|NP_922178.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 506
Score = 74.3 bits (181), Expect = 2e-12
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A E+ + ++G TPN TY++ + G C +G L K + MC N +++ M
Sbjct: 252 AMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMD 311
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANR 136
LC+ G EA ++ + M G+ PD+ Y ++ IE ++ + L +V +
Sbjct: 312 YLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHG--YAIEGALVEMHGLFDLMVQS-- 367
Query: 137 VGDDDDDDDDDGVSVSVSA---DISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
D D + SA + A +F + + G PN VTYST I G CK
Sbjct: 368 --DMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCK 420
Score = 53.1 bits (126), Expect = 5e-06
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 40/229 (17%)
Query: 15 SPASEI--FGNIYRSGE---TPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNH 69
+PA+ + F + R+G TP V TY I C AG L + + + ++ ++ +
Sbjct: 67 NPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPI 126
Query: 70 CFNAIMYGLCQRGELDEASQ-VLEEMKSIGILPDVYGYYVFV------NAKDVGIEVDIM 122
FN ++ GLC D+A VL M + +P+V+ + + + N +E+ M
Sbjct: 127 IFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHM 186
Query: 123 SCNFLLKCL---------VDANRVGDDDDD---------DDDDGVSVSVSADI------- 157
+ CL +D G D D D +V + + I
Sbjct: 187 MADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKG 246
Query: 158 ---SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 203
A E+ + ++G TPN TY++ + G C +G L K + MC
Sbjct: 247 QAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMC 295
Score = 50.8 bits (120), Expect = 2e-05
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 38/177 (21%)
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G PNVV+YST I GL K G + M N +++I+ LC+ +D+A
Sbjct: 193 GCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKA 252
Query: 88 SQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDD 147
+V + M G+ P+ + Y V+ C+
Sbjct: 253 MEVHDRMVKNGVTPNCFTYTSLVHG----------FCS---------------------- 280
Query: 148 GVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCR 204
S ++ A + + +G PNVVTYS+++ LCK G K+ +M +
Sbjct: 281 ------SGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVK 331
Score = 38.1 bits (87), Expect = 0.15
Identities = 22/76 (28%), Positives = 32/76 (41%)
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A +F + + G PN VTYST I G CK + L M N +N
Sbjct: 389 VDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNI 448
Query: 74 IMYGLCQRGELDEASQ 89
++ GL + G A +
Sbjct: 449 MLQGLFRTGRTATAKE 464
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 374,656,049
Number of Sequences: 2540612
Number of extensions: 15755116
Number of successful extensions: 98833
Number of sequences better than 10.0: 706
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 89456
Number of HSP's gapped (non-prelim): 5163
length of query: 205
length of database: 863,360,394
effective HSP length: 122
effective length of query: 83
effective length of database: 553,405,730
effective search space: 45932675590
effective search space used: 45932675590
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)
Medicago: description of AC149209.4