BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149205.3 + phase: 0 /pseudo
(523 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE03883.2| OSJNBb0015N08.11 [Oryza sativa (japonica cultiva... 50 1e-04
ref|XP_480974.1| cyst nematode resistance protein-like protein [... 47 0.001
ref|XP_470208.1| Putative retroelement [Oryza sativa (japonica c... 47 0.001
dbj|BAC15618.2| unnamed protein product [Oryza sativa (japonica ... 46 0.003
gb|AAX94970.1| retrotransposon protein, putative, unclassified [... 45 0.004
ref|XP_479426.1| cyst nematode resistance protein-like protein [... 44 0.012
gb|AAP53704.1| contains similarity to non-LTR reverse transcript... 44 0.016
gb|AAT38805.1| hypothetical protein PGEC747E24.5 [Solanum demissum] 43 0.021
dbj|BAD52658.1| HcrVf2 protein-like [Oryza sativa (japonica cult... 43 0.021
gb|AAP54692.1| putative reverse transcriptase [Oryza sativa (jap... 42 0.047
gb|AAV32224.1| hypothetical protein [Oryza sativa (japonica cult... 41 0.11
dbj|BAB02611.1| unnamed protein product [Arabidopsis thaliana] 41 0.11
emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa (japonica cultivar... 40 0.18
ref|NP_908814.1| B1088D01.11 [Oryza sativa (japonica cultivar-gr... 39 0.31
gb|AAT93947.1| unknown protein [Oryza sativa (japonica cultivar-... 39 0.31
ref|NP_917200.1| P0707D10.17 [Oryza sativa (japonica cultivar-gr... 39 0.40
emb|CAI44611.1| P0650D04.15 [Oryza sativa (japonica cultivar-gro... 39 0.53
ref|NP_909558.1| putative reverse transcriptase [Oryza sativa] g... 39 0.53
ref|NP_909258.1| P0434B04.24 [Oryza sativa (japonica cultivar-gr... 38 0.69
gb|AAL76001.1| putative gag-pol polyprotein [Zea mays] 38 0.69
>emb|CAE03883.2| OSJNBb0015N08.11 [Oryza sativa (japonica cultivar-group)]
gi|21741977|emb|CAD41785.1| OSJNBa0035M09.1 [Oryza
sativa (japonica cultivar-group)]
gi|50928543|ref|XP_473799.1| OSJNBb0015N08.11 [Oryza
sativa (japonica cultivar-group)]
Length = 1026
Score = 50.4 bits (119), Expect = 1e-04
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 379 WRRHLWVWEE-DLVEECGDLLLTVSLQELETDRWMWLSDQIRGYTVRGVYDMLTSQE*PH 437
WR+ + WE +LVE C D L W LS + +TVR Y L Q+
Sbjct: 793 WRKIVNSWEGLNLVENCKDKL------------WWTLSKDGK-FTVRSFYRALKLQQTSF 839
Query: 438 VHQNMELIWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVEDRICVTGCGHVEDTTH 497
++ IW +VPLK+ I ++++ TK NL RG +++ C VE H
Sbjct: 840 PNKK---IWKFRVPLKIRIFIWFFTKNKILTKDNLLKRGWRKGDNK--CQFCDKVETVQH 894
Query: 498 MFLSCPIFGALLSMVQTWVGVEGV 521
+F CP+ + +++ + V+ V
Sbjct: 895 LFFDCPLARLIWNIIACALNVKPV 918
>ref|XP_480974.1| cyst nematode resistance protein-like protein [Oryza sativa
(japonica cultivar-group)] gi|40253728|dbj|BAD05668.1|
cyst nematode resistance protein-like protein [Oryza
sativa (japonica cultivar-group)]
gi|40253549|dbj|BAD05496.1| cyst nematode resistance
protein-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 184
Score = 47.0 bits (110), Expect = 0.001
Identities = 32/116 (27%), Positives = 50/116 (42%), Gaps = 6/116 (5%)
Query: 404 QELETDRWMWLSDQIRGYTVRGVYDMLTSQE*PHVHQNMELIWHKQVPLKVSILALRLLR 463
QE +T RW D ++V YD+ V + +L+W + P KV +
Sbjct: 13 QEDDTIRWKLTPDGF--FSVSSAYDLFFMAR--EVSLSGQLVWQTKAPSKVRFFLWLATK 68
Query: 464 DRLPTKSNLADRGITFVEDRICVTGCGHVEDTTHMFLSCPIFGALLSMVQTWVGVE 519
R T NLA RG + CV ED H+F+SC + +++ W+ V+
Sbjct: 69 SRCLTADNLAKRGWPHQDQ--CVLCQRQQEDCLHLFVSCDYTKRVWRLLRDWINVD 122
>ref|XP_470208.1| Putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|27497213|gb|AAO17357.1| Putative retroelement [Oryza
sativa (japonica cultivar-group)]
gi|15451617|gb|AAK98741.1| Hypothetical protein similar
to putative retroelements [Oryza sativa]
Length = 387
Score = 47.0 bits (110), Expect = 0.001
Identities = 24/69 (34%), Positives = 37/69 (52%), Gaps = 2/69 (2%)
Query: 445 IWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVEDRICVTGCGHVEDTTHMFLSCPI 504
IW P +V A + ++RLPT+ NL + T + C ++EDT H+FL CP+
Sbjct: 229 IWRSAAPPRVKFFAWLMSKNRLPTRVNLHKK--TILPTPTCELCNANLEDTYHIFLRCPM 286
Query: 505 FGALLSMVQ 513
A +M+Q
Sbjct: 287 AAAFWNMIQ 295
>dbj|BAC15618.2| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1197
Score = 46.2 bits (108), Expect = 0.003
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 414 LSDQIRGYTVRGVYDMLTSQE*PHVHQNMELIWHKQVPLKVSILALRLLRDRLPTKSNLA 473
L++++ T + +YD+ + P N + IW ++PLK+ + A L+RDRL TK NL
Sbjct: 1007 LNNRLGNLTTKTIYDLRSPPGFPS--PNWKFIWDCRMPLKIKLFAWLLVRDRLSTKLNLL 1064
Query: 474 DRGITFVEDRICVTGCGHVEDTTHMFLSCP 503
+ I V+ C E H+ +CP
Sbjct: 1065 KKKI--VQTATCDICSTTDETADHLSFNCP 1092
>gb|AAX94970.1| retrotransposon protein, putative, unclassified [Oryza sativa
(japonica cultivar-group)]
Length = 816
Score = 45.4 bits (106), Expect = 0.004
Identities = 41/139 (29%), Positives = 59/139 (41%), Gaps = 28/139 (20%)
Query: 386 WEEDLVEECG-----DLLLTVSLQELETDRWM-WLSDQIRGYTVRGVYDMLTSQE*PHVH 439
W+E L+ + D +L + L E TD ++ W +++ +TVR Y + ++E H
Sbjct: 241 WDEGLIRQIFYPPYVDEILKIKLPESPTDDFLAWHPERLGVFTVRSAYKLGLAEE----H 296
Query: 440 QNMEL----------------IWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVEDR 483
+ E IW QVP KV I A RL +RLPT+ N R I V
Sbjct: 297 RANEAGACSSNGNGDRVLWKNIWSAQVPQKVCIFAWRLAVERLPTQHNKQKRNI--VPSA 354
Query: 484 ICVTGCGHVEDTTHMFLSC 502
C ED H + C
Sbjct: 355 RCEVCGAPREDGFHATVVC 373
>ref|XP_479426.1| cyst nematode resistance protein-like protein [Oryza sativa
(japonica cultivar-group)] gi|50510233|dbj|BAD31431.1|
cyst nematode resistance protein-like protein [Oryza
sativa (japonica cultivar-group)]
gi|22296318|dbj|BAC10089.1| cyst nematode resistance
protein-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 210
Score = 43.9 bits (102), Expect = 0.012
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 18/137 (13%)
Query: 385 VWEEDLVEECGDLLLTVSLQELETDRWMWLSDQIRGYTVRGVYDM--LTSQE*PHVHQNM 442
+W+E L+ G+ + D+ W ++V YDM + Q P
Sbjct: 7 LWDELLLFNLGN----------DPDKIRWKPGPDGAFSVSSAYDMFFMARQSYPFGQH-- 54
Query: 443 ELIWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVEDRICVTGCGHVEDTTHMFLSC 502
IW P +V R R T NLA +G + + C ED H+F++C
Sbjct: 55 --IWQTNAPSRVRFFFWLAARGRCQTADNLAKKG--WPHEDSCALCMREQEDCHHLFVTC 110
Query: 503 PIFGALLSMVQTWVGVE 519
G + +++ W+ V+
Sbjct: 111 EFSGRVWELMRAWISVD 127
>gb|AAP53704.1| contains similarity to non-LTR reverse transcriptase [Oryza sativa
(japonica cultivar-group)] gi|37534230|ref|NP_921417.1|
contains similarity to non-LTR reverse transcriptase
[Oryza sativa (japonica cultivar-group)]
Length = 379
Score = 43.5 bits (101), Expect = 0.016
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 443 ELIWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVEDRICVTGCGHVEDTTHMFLSC 502
+ IW + PLKV A L++DRL TK NL + T V + IC G E +H+ C
Sbjct: 264 DAIWKCKAPLKVKFFAWLLVKDRLSTKKNLHKK--TIVPNDICDICNGATETASHLCFFC 321
Query: 503 P 503
P
Sbjct: 322 P 322
>gb|AAT38805.1| hypothetical protein PGEC747E24.5 [Solanum demissum]
Length = 1155
Score = 43.1 bits (100), Expect = 0.021
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 21/136 (15%)
Query: 375 GAWQWRRHLWVWEEDLVEECGDLL--LTVSLQELETDRWMWLSDQIRGYTVRGVYDMLTS 432
G W W + + L + ++ L ++L E D+ +W +TV +++
Sbjct: 840 GKWNWS----ILQNQLPNQIKVMITGLGLNLNNEEQDKPVWSPTSAGNFTVTSAWNICR- 894
Query: 433 QE*PHVHQNMEL-----IWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVEDRICVT 487
H+ +E+ IWHK +P K+S L + + +RLPT + GI C T
Sbjct: 895 ------HKGIEITDFNKIWHKDIPFKMSFLTWKAIINRLPTGAKFKRLGIPLSPTCYCCT 948
Query: 488 GCG---HVEDTTHMFL 500
+E H+F+
Sbjct: 949 NNNIPTTLESAEHIFM 964
>dbj|BAD52658.1| HcrVf2 protein-like [Oryza sativa (japonica cultivar-group)]
Length = 1064
Score = 43.1 bits (100), Expect = 0.021
Identities = 26/77 (33%), Positives = 39/77 (49%), Gaps = 2/77 (2%)
Query: 396 DLLLTVSLQELETDRWMWLSDQIRGYTVRGVYDMLTSQE*PHVHQNMELIWHKQVPLKVS 455
D LL+V L E R S Q+ + + +Y+ +Q N + +WH + PLK
Sbjct: 778 DKLLSVHLHECPDFRAAKCSPQLPILSAKHIYE--ATQVWLDACPNWKFVWHNKAPLKAQ 835
Query: 456 ILALRLLRDRLPTKSNL 472
+ A L ++RLPTK NL
Sbjct: 836 LFAWLLAKERLPTKHNL 852
>gb|AAP54692.1| putative reverse transcriptase [Oryza sativa (japonica
cultivar-group)] gi|37536206|ref|NP_922405.1| putative
reverse transcriptase [Oryza sativa (japonica
cultivar-group)] gi|27311287|gb|AAO00713.1|
retrotransposon protein, putative, unclassified [Oryza
sativa (japonica cultivar-group)]
Length = 1557
Score = 42.0 bits (97), Expect = 0.047
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 407 ETDRWMWLSDQIRGYTVRGVYDML---------TSQE*PHVHQNMELIWHKQVPLKVSIL 457
E D W D++ ++VR Y + +S ++ + EL+W VP KV I
Sbjct: 1366 EEDFIAWHPDKLGNFSVRTAYRLAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVKIF 1425
Query: 458 ALRLLRDRLPTKSNLADRGITFVEDRICVTGCGHVEDTTHMFLSCP 503
R + LPT N R + + CV EDT H CP
Sbjct: 1426 TWRATSNCLPTWDNKKKRNLEISD--TCVICGMEKEDTMHALCRCP 1469
>gb|AAV32224.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|45267888|gb|AAS55787.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1936
Score = 40.8 bits (94), Expect = 0.11
Identities = 38/162 (23%), Positives = 67/162 (40%), Gaps = 23/162 (14%)
Query: 367 LVGGGGWWGAWQWRRHLWVWEEDLVEECGDLLLTVSLQELETDRWMWLSDQIRGYTVRGV 426
L+ G W + + ++ + D++++ + +S + LE D W D+ ++VR
Sbjct: 1603 LIAEDGTWDSAKINQYFLKIDADIIQK-----ICISAR-LEEDFIAWHPDKTGRFSVRSA 1656
Query: 427 YDML---------TSQE*PHVHQNMELIWHKQVPLKVSILALRLLRDRLPTKSNLADRGI 477
Y + +S ++++ ELIW VP KV I A R+ + L T N R +
Sbjct: 1657 YKLALQLADMNNCSSSSSSRLNKSWELIWKCNVPQKVRIFAWRVASNSLATMENKKKRNL 1716
Query: 478 TFVEDRICVTGCGHVEDTTHMFLSCPIFGALLSMVQTWVGVE 519
+ +C ED H C +L WV +E
Sbjct: 1717 ERFD--VCGICDREKEDAGHALCRCVHANSL------WVNLE 1750
>dbj|BAB02611.1| unnamed protein product [Arabidopsis thaliana]
Length = 332
Score = 40.8 bits (94), Expect = 0.11
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 15/132 (11%)
Query: 382 HLWVWEE---DLVEECGDLLLTVSLQELETDRWMWLSDQIRGYTVRGVYDMLTSQE*PHV 438
H W E+ +L+ D+L + DR WL + Y+ + Y M S P +
Sbjct: 63 HQWDCEDIRRELLHHEEDILSLILSSTKRPDRLWWLPAKAGVYSTKSGYAMAKSNLVPCL 122
Query: 439 HQNMELI---WHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVEDRICVTGC---GHV 492
+ W + + + + LP + L+ RGI + TGC G +
Sbjct: 123 EEGFNWKTNNWKVYTSPMIRMFLSKATKKALPIGTALSARGI------VVETGCKRCGEI 176
Query: 493 EDTTHMFLSCPI 504
ED H+F CPI
Sbjct: 177 EDALHIFFRCPI 188
>emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa (japonica cultivar-group)]
gi|50923489|ref|XP_472105.1| OSJNBa0081G05.2 [Oryza
sativa (japonica cultivar-group)]
Length = 1711
Score = 40.0 bits (92), Expect = 0.18
Identities = 34/145 (23%), Positives = 61/145 (41%), Gaps = 17/145 (11%)
Query: 367 LVGGGGWWGAWQWRRHLWVWEEDLVEECGDLLLTVSLQELETDRWMWLSDQIRGYTVRGV 426
L+ G W + + ++ + D++++ + +S + LE D W D+ ++VR
Sbjct: 1447 LIAEDGTWDSAKINQYFLKIDADIIQK-----ICISAR-LEEDFIAWHPDKTGRFSVRSA 1500
Query: 427 YDML---------TSQE*PHVHQNMELIWHKQVPLKVSILALRLLRDRLPTKSNLADRGI 477
Y + +S ++++ ELIW VP KV I A R+ + L T N R +
Sbjct: 1501 YKLALQLADMNNCSSSSSSRLNKSWELIWKCNVPQKVRIFAWRVASNSLATMENKKKRNL 1560
Query: 478 TFVEDRICVTGCGHVEDTTHMFLSC 502
+ +C ED H C
Sbjct: 1561 ERFD--VCGICDREKEDAGHALCCC 1583
>ref|NP_908814.1| B1088D01.11 [Oryza sativa (japonica cultivar-group)]
Length = 375
Score = 39.3 bits (90), Expect = 0.31
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 10/133 (7%)
Query: 385 VWEEDLVEECGDLLLT---VSLQELETDRWMWLSDQIRGYTVRGVYD-MLTSQE*PHVHQ 440
+W D +E L L VSL E R LS Q T R +Y +L E VH
Sbjct: 155 LWHHDCSQELSQLTLALQDVSLSGEEDLRLSPLSQQ-GDLTTREIYHTLLPPSETDLVHN 213
Query: 441 NMELIWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVEDRICVTGCGHVEDTTHMFL 500
IW P K A L +DRL T NL + I ++ C E + H+F
Sbjct: 214 ---FIWKNASPPKFKFFAWLLSKDRLSTAKNLFTKII--LQSPQCAIRQTGEETSNHLFF 268
Query: 501 SCPIFGALLSMVQ 513
CP A + ++
Sbjct: 269 MCPFATAFWTTIR 281
>gb|AAT93947.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 144
Score = 39.3 bits (90), Expect = 0.31
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 437 HVHQNMELIWHKQVPLKVSILALRLLRDRLPTKSNLADRG-ITFVEDRICVTGCGHVEDT 495
H+ E IW P +V + +RLPT NL + I + ++C T C EDT
Sbjct: 5 HLWPPWEFIWKSSAPPRVKFFGWLMTMNRLPTAVNLHKKSTIPSLTCQLCNT-C--PEDT 61
Query: 496 THMFLSCPIFGALLSMVQ 513
H+FL+ P+ A ++Q
Sbjct: 62 DHIFLAYPLASAFWGLIQ 79
>ref|NP_917200.1| P0707D10.17 [Oryza sativa (japonica cultivar-group)]
Length = 892
Score = 38.9 bits (89), Expect = 0.40
Identities = 32/107 (29%), Positives = 43/107 (39%), Gaps = 13/107 (12%)
Query: 407 ETDRWMWLSDQIRGYTVRGVYDML---------TSQE*PHVHQNMELIWHKQVPLKVSIL 457
E D W D+ ++VR Y + +S + LIW P KV I
Sbjct: 508 EDDFVAWHPDKHGKFSVRSAYGLACNLVNMETSSSSSSARCKRMWNLIWQTNAPQKVRIF 567
Query: 458 ALRLLRDRLPTKSNLADRGITFVEDRICVTGCG-HVEDTTHMFLSCP 503
A R + L T N A R + + IC+ CG EDT H+ CP
Sbjct: 568 AWRAATNCLATMENKAKRKLE--QSDICLV-CGLEKEDTKHVLCRCP 611
>emb|CAI44611.1| P0650D04.15 [Oryza sativa (japonica cultivar-group)]
Length = 1579
Score = 38.5 bits (88), Expect = 0.53
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 363 EEHVLVG--GGGWWGAWQWRRHLWVWEEDLVEECGDLLLTVSLQELETDRWMWLSDQIRG 420
++ +LV G G G +RR E + + +++ + L + D+ W + +
Sbjct: 1327 QQEILVSQVGQGGPGCLSFRRSFGPEELEEWNDLKEIIDQIVLSDTH-DKLNWGLNANKK 1385
Query: 421 YTVRGVYDMLTSQE*PHVHQNMELIWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFV 480
YT R +Y LT + V+ M W P+K LRDR+ + L + +
Sbjct: 1386 YTTRSLYRALTFRGIGDVNAKM---WGCPCPMKHKHFLSLALRDRIQSAEQLKKKN--WE 1440
Query: 481 EDRICVTGCGHVEDTTHMFLSCPI 504
C CG +E T H+ +CP+
Sbjct: 1441 GSEFCQL-CGELETTNHILFNCPM 1463
>ref|NP_909558.1| putative reverse transcriptase [Oryza sativa]
gi|14018103|gb|AAK52166.1| putative reverse
transcriptase [Oryza sativa]
Length = 1185
Score = 38.5 bits (88), Expect = 0.53
Identities = 37/157 (23%), Positives = 63/157 (39%), Gaps = 28/157 (17%)
Query: 386 WEEDLVEEC-----GDLLLTVSLQELETDRWMWLSDQIRGYTVRGVY------------- 427
W+EDL++ + +L + + D W + ++VR Y
Sbjct: 788 WDEDLIDTLFWPIDANRILQIPISAGREDFVAWHHTRSGIFSVRSAYHCQWNAKFGSKER 847
Query: 428 --DMLTSQE*PHVHQNMELIWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVED-RI 484
D +S P V N+ W ++P K+ I A R+L +P K LAD+ I +
Sbjct: 848 LPDGASSSSRP-VWDNL---WKLEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPV 903
Query: 485 CVTGCGHVEDTTHMFLSCPIFGALLSMVQTWVGVEGV 521
C +G VED HM +C + + W ++ +
Sbjct: 904 CSSG---VEDIKHMVFTCRRAKLIWKQLGIWSRIQPI 937
>ref|NP_909258.1| P0434B04.24 [Oryza sativa (japonica cultivar-group)]
Length = 406
Score = 38.1 bits (87), Expect = 0.69
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 396 DLLLTVSLQEL-ETDRWMWLSDQIRGYTVRGVYDM--LTSQE*PHVHQNMELIWHKQVPL 452
D + VSLQ++ +T +W +D ++V YD+ + +++ + + +WH +V
Sbjct: 290 DEVRDVSLQQMADTIKWKLTADG--NFSVASAYDLFFIATEDCSYG----DTLWHSRVSS 343
Query: 453 KVSILALRLLRDRLPTKSNLADRGITFVEDRICVTGCGHVEDTTHMFLSCPIFGALLSMV 512
+V L+ R T NLA R + D IC ED H+ +SC + A L+
Sbjct: 344 RVRFFMWIALKGRCLTADNLAKR--NWPHDAICSLCQRENEDCHHLLVSCD-YTAALAQA 400
Query: 513 QTWV 516
+T V
Sbjct: 401 ETLV 404
>gb|AAL76001.1| putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 38.1 bits (87), Expect = 0.69
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 445 IWHKQVPLKVSILALRLLRDRLPTKSNLADRGITFVEDRICVTGCGHV-EDTTHMFLSC 502
+W Q P +V + R+ + NLA + I V+D +C CG EDTTH+FL C
Sbjct: 2294 VWRNQAPPRVCFFGWLVNNGRIQCRVNLARKQI--VQDTMCEV-CGRAPEDTTHIFLHC 2349
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.364 0.164 0.688
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 756,659,593
Number of Sequences: 2540612
Number of extensions: 27059145
Number of successful extensions: 154284
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 154247
Number of HSP's gapped (non-prelim): 60
length of query: 523
length of database: 863,360,394
effective HSP length: 133
effective length of query: 390
effective length of database: 525,458,998
effective search space: 204929009220
effective search space used: 204929009220
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.5 bits)
S2: 77 (34.3 bits)
Medicago: description of AC149205.3