BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149135.13 - phase: 0
(316 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN86163.1| putative cell division protein [Arabidopsis thali... 575 e-163
gb|AAM65500.1| cell division-like protein [Arabidopsis thaliana] 569 e-161
dbj|BAD53799.1| putative FtsJ homolog 1 isoform b [Oryza sativa ... 555 e-157
emb|CAB69851.1| cell division-like protein [Arabidopsis thaliana... 523 e-147
gb|AAH85449.1| Zgc:101831 [Danio rerio] gi|55925303|ref|NP_00100... 380 e-104
emb|CAG01063.1| unnamed protein product [Tetraodon nigroviridis] 372 e-101
ref|NP_001016817.1| hypothetical protein LOC549571 [Xenopus trop... 367 e-100
ref|NP_598752.2| Ftsj homolog [Mus musculus] gi|26331300|dbj|BAC... 363 3e-99
ref|XP_392223.2| PREDICTED: similar to Zgc:101831 [Apis mellifera] 363 5e-99
ref|XP_538022.1| PREDICTED: similar to Putative ribosomal RNA me... 360 3e-98
gb|AAH34880.1| Ftsj homolog [Mus musculus] 360 3e-98
emb|CAA06749.1| JM23 [Homo sapiens] gi|23270836|gb|AAH23584.1| F... 357 2e-97
emb|CAH90000.1| hypothetical protein [Pongo pygmaeus] 356 6e-97
gb|AAC33734.1| cell division protein [Homo sapiens] gi|29029591|... 355 1e-96
ref|XP_343772.2| PREDICTED: similar to Ftsj homolog [Rattus norv... 353 5e-96
ref|XP_318425.2| ENSANGP00000014205 [Anopheles gambiae str. PEST... 339 5e-92
emb|CAB11724.1| SPAC4F10.03c [Schizosaccharomyces pombe] gi|1911... 324 2e-87
ref|XP_591037.1| PREDICTED: similar to FtsJ homolog 1 isoform b ... 323 5e-87
emb|CAA85279.2| Hypothetical protein R74.7 [Caenorhabditis elega... 319 6e-86
emb|CAE72863.1| Hypothetical protein CBG20162 [Caenorhabditis br... 319 6e-86
>gb|AAN86163.1| putative cell division protein [Arabidopsis thaliana]
gi|30679168|ref|NP_851026.1| FtsJ-like methyltransferase
family protein [Arabidopsis thaliana]
Length = 309
Score = 575 bits (1483), Expect = e-163
Identities = 283/307 (92%), Positives = 294/307 (95%), Gaps = 1/307 (0%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS
Sbjct: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
R+LYLPAK + ++KD +LPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA
Sbjct: 61 RQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTH+LKEGGKFIAKIFRGKDTSLLYCQL
Sbjct: 121 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQL 180
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
KLFFP VTFAKPKSSRNSSIEAFAVCENYSPPEGFNP+DLHRLLEKVGSPSG D DC S
Sbjct: 181 KLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPRDLHRLLEKVGSPSGGSDLDCSS 240
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVA-GGTYQSLDPVQPPIAPPYKRALELK 299
GWLEGPNKVYIPFLACGDLTGYDSDRSYPLP+ A G +YQSLDP+QPPIAPPYKRALELK
Sbjct: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPREADGSSYQSLDPIQPPIAPPYKRALELK 300
Query: 300 KASPQGF 306
KAS Q F
Sbjct: 301 KASAQSF 307
>gb|AAM65500.1| cell division-like protein [Arabidopsis thaliana]
Length = 308
Score = 569 bits (1467), Expect = e-161
Identities = 282/307 (91%), Positives = 293/307 (94%), Gaps = 2/307 (0%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS
Sbjct: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
R+LYLPAK + ++KD +LPLIVAIDLQPMAPIEGVIQVQGDITNART EVVIRHFDGCKA
Sbjct: 61 RQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNART-EVVIRHFDGCKA 119
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTH+LKEGGKFIAKIFRGKDTSLLYCQL
Sbjct: 120 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQL 179
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
KLFFP VTFAKPKSSRNSSIEAFAVCENYSPPEGFNP+DLHRLLEKVGSPSG D DC S
Sbjct: 180 KLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPRDLHRLLEKVGSPSGGSDLDCSS 239
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVA-GGTYQSLDPVQPPIAPPYKRALELK 299
GWLEGPNKVYIPFLACGDLTGYDSDRSYPLP+ A G +YQSLDP+QPPIAPPYKRALELK
Sbjct: 240 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPREADGSSYQSLDPIQPPIAPPYKRALELK 299
Query: 300 KASPQGF 306
KAS Q F
Sbjct: 300 KASAQSF 306
>dbj|BAD53799.1| putative FtsJ homolog 1 isoform b [Oryza sativa (japonica
cultivar-group)]
Length = 317
Score = 555 bits (1430), Expect = e-157
Identities = 273/317 (86%), Positives = 289/317 (91%), Gaps = 1/317 (0%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MGKAS+DKRDIYYRKAKEEGWRARSAFKLLQID+EFNIF GVKRVVDLCAAPGSWSQVLS
Sbjct: 1 MGKASKDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
R LY+PAK +PD K+ +LPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA
Sbjct: 61 RNLYVPAKQSPDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHDMDEFVQSQLILA LTIVTHVLK GGKF+AKIFRGKDTSLLYCQL
Sbjct: 121 DLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAKIFRGKDTSLLYCQL 180
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
KLFF VTFAKPKSSRNSSIEAFAVCENYSPPEGF KDL+ LLEKVG+PSG DD DC S
Sbjct: 181 KLFFSQVTFAKPKSSRNSSIEAFAVCENYSPPEGFKEKDLYHLLEKVGTPSGADDLDCRS 240
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
GWLEGPNKVYIPFLACGDL+GYDSDRSYPL GG+YQSLDPVQPPIAPPYK ALE+KK
Sbjct: 241 GWLEGPNKVYIPFLACGDLSGYDSDRSYPLTSTEGGSYQSLDPVQPPIAPPYKTALEMKK 300
Query: 301 ASPQGF-RELENLSLDS 316
+ G ++ LSLDS
Sbjct: 301 VASHGIGADISKLSLDS 317
>emb|CAB69851.1| cell division-like protein [Arabidopsis thaliana]
gi|11279082|pir||T45963 cell division-like protein -
Arabidopsis thaliana
Length = 287
Score = 523 bits (1346), Expect = e-147
Identities = 262/307 (85%), Positives = 273/307 (88%), Gaps = 23/307 (7%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS
Sbjct: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
R+LYLPAK + ++KD +LPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA
Sbjct: 61 RQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTH+LKEGGKFIAKIFRGKDTSLLYCQ
Sbjct: 121 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQ- 179
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
AFAVCENYSPPEGFNP+DLHRLLEKVGSPSG D DC S
Sbjct: 180 ---------------------AFAVCENYSPPEGFNPRDLHRLLEKVGSPSGGSDLDCSS 218
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVA-GGTYQSLDPVQPPIAPPYKRALELK 299
GWLEGPNKVYIPFLACGDLTGYDSDRSYPLP+ A G +YQSLDP+QPPIAPPYKRALELK
Sbjct: 219 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPREADGSSYQSLDPIQPPIAPPYKRALELK 278
Query: 300 KASPQGF 306
KAS Q F
Sbjct: 279 KASAQSF 285
>gb|AAH85449.1| Zgc:101831 [Danio rerio] gi|55925303|ref|NP_001007385.1|
hypothetical protein LOC492512 [Danio rerio]
Length = 323
Score = 380 bits (977), Expect = e-104
Identities = 192/303 (63%), Positives = 231/303 (75%), Gaps = 17/303 (5%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG++S+DKRDIYYR AKEEGWRARSAFKLLQ+DEEF +F GV R VDLCAAPGSWSQVLS
Sbjct: 1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFKLFRGVSRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPL-IVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCK 119
RKL KD++ + IVA+DLQ MAP+ GV Q+QGDIT TAE +IRHF+G
Sbjct: 61 RKLR--------GKDKSEEVKIVAVDLQAMAPLPGVTQIQGDITKISTAEEIIRHFEGES 112
Query: 120 ANLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQ 179
A+LVVCDGAPDVTGLHD+DE++Q+QL+LA L I THVLK GG F+AKIFRGKD +LLY Q
Sbjct: 113 ADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGNFVAKIFRGKDVTLLYSQ 172
Query: 180 LKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCV 239
LK+FF VT AKP SSRNSSIEAF VC+NYSPPEG+ P + LL+ D
Sbjct: 173 LKIFFSFVTCAKPPSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLD--------HSYDVD 224
Query: 240 SGWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELK 299
LEGPN++ +PFLACGDL+G+DSDR+YPL + YQ L P QPPI PPY++A +L+
Sbjct: 225 FNQLEGPNRIIVPFLACGDLSGFDSDRTYPLQLDSSKEYQYLPPTQPPIRPPYQQACQLR 284
Query: 300 KAS 302
K++
Sbjct: 285 KSN 287
>emb|CAG01063.1| unnamed protein product [Tetraodon nigroviridis]
Length = 297
Score = 372 bits (954), Expect = e-101
Identities = 188/300 (62%), Positives = 228/300 (75%), Gaps = 15/300 (5%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG++S+DKRDIYYR AKEEGWRARSAFKLLQ+D+EF++F GV RVVDLCAAPGSWSQVLS
Sbjct: 1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDQEFDLFTGVTRVVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
RKL + A +AK IVA+DLQ MAP+ GV Q+QGDIT TA+ +IRHF+G A
Sbjct: 61 RKLRQDER-AEEAK------IVAVDLQAMAPLPGVTQIQGDITKVTTAQEIIRHFEGQPA 113
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHD+DE++Q+QL+LA L I THVLK GG F+AKIFRGKD +LLY QL
Sbjct: 114 DLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQL 173
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
K+FF VT AKP+SSRNSSIEAF VC+NYSPP+G+ P + LL+ D
Sbjct: 174 KIFFTGVTCAKPRSSRNSSIEAFVVCQNYSPPKGYVPNMSNPLLD--------HSYDVDF 225
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
LEGPN+V +PFLACGDL+ +DSDR+YPL Y+ P QPPI PPY++A L++
Sbjct: 226 NQLEGPNRVIVPFLACGDLSAFDSDRTYPLQLEGDRQYEYTPPTQPPIRPPYEQACHLRR 285
>ref|NP_001016817.1| hypothetical protein LOC549571 [Xenopus tropicalis]
Length = 335
Score = 367 bits (942), Expect = e-100
Identities = 185/300 (61%), Positives = 224/300 (74%), Gaps = 14/300 (4%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG++S+DKRDIYYR AKEEGWRARSAFKLLQ+DEE+ +F+GV+R VDLCAAPGSWSQVLS
Sbjct: 1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEYRLFQGVQRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
RKL + + K IVA+DLQ MAP+ GVIQ+QGDIT TA +IRHF+G A
Sbjct: 61 RKLRGSEEQSGQVK------IVAVDLQAMAPLPGVIQIQGDITKVSTAHEIIRHFEGQPA 114
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHD+DE++Q+QL+LA L I THVL++GG F+AKIFRGKD +LLY QL
Sbjct: 115 DLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLRDGGTFVAKIFRGKDVTLLYSQL 174
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
++FF VT AKP+SSRNSSIEAF VC+ Y PPEG+ P + LL+ D
Sbjct: 175 QIFFREVTCAKPRSSRNSSIEAFVVCQGYRPPEGYVPNMSNPLLDHC--------YDVHF 226
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
LEGPN+V +PFLACGDL+ YDSD++YPL A Y + P QPPI PPY+ A KK
Sbjct: 227 NQLEGPNRVIVPFLACGDLSAYDSDQTYPLKLQADKDYTYVPPTQPPICPPYQEACFRKK 286
>ref|NP_598752.2| Ftsj homolog [Mus musculus] gi|26331300|dbj|BAC29380.1| unnamed
protein product [Mus musculus]
Length = 324
Score = 363 bits (933), Expect = 3e-99
Identities = 186/300 (62%), Positives = 223/300 (74%), Gaps = 18/300 (6%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG+ S+DKRD+YYR AKE GWRARSAFKLLQ+DEEF +F+GVKR VDLCAAPGSWSQVLS
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
+K+ + +VA+DLQ MAP+ GVIQ+QGDIT TA+ +I+HF+GC A
Sbjct: 61 QKV----------GGQGSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPA 110
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHD+DE++Q+QL+LA L I THVLK GG F+AKIFRG+D +LLY QL
Sbjct: 111 DLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQL 170
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
++FF V AKPKSSRNSSIEAFAVC+ Y PPEGF P DL R L DTD
Sbjct: 171 RIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPPEGFIP-DLTRPLLNHSY-----DTD--F 222
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
L+GP +V +PF+ACGDL+ YDSDR+Y L G Y+ P QPPIAPPY+ A LKK
Sbjct: 223 NQLDGPTRVIVPFVACGDLSAYDSDRTYSLDLDGGSEYKYTPPTQPPIAPPYQEACRLKK 282
>ref|XP_392223.2| PREDICTED: similar to Zgc:101831 [Apis mellifera]
Length = 370
Score = 363 bits (931), Expect = 5e-99
Identities = 190/317 (59%), Positives = 230/317 (71%), Gaps = 11/317 (3%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MGK S+DKRDIYYR+AKEEGWRARSAFKLLQID E +I +GV + VDLCAAPGSWSQVLS
Sbjct: 1 MGKTSKDKRDIYYRRAKEEGWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
R+L K A + + P IVA+DLQ MAP+EGVIQ+QGDITN TA+ +I HFD +A
Sbjct: 61 RRLNENYKKALETGNAIPPKIVAVDLQAMAPLEGVIQIQGDITNIDTAKQIISHFDNEQA 120
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHDMD ++QSQL+LA L I TH+LK+GG F+AKIFR KD +LLY QL
Sbjct: 121 DLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILKQGGTFVAKIFRAKDVTLLYAQL 180
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
K+FFP V KP SSRNSSIEAF VC++YSPPEG+ P ++ LL P +D
Sbjct: 181 KIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYKPHMMNPLL--THKPCDFND----- 233
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
L G N+V +PF+ CGDL+ DSD YPL G TY +PVQ PI+PPYK AL L +
Sbjct: 234 --LTGINRVIVPFVVCGDLSQPDSDTCYPL-DFEGKTYTYHEPVQTPISPPYKEALSLME 290
Query: 301 ASPQGFRELE-NLSLDS 316
FR + N+ +D+
Sbjct: 291 DRDTDFRRFDVNVVVDN 307
>ref|XP_538022.1| PREDICTED: similar to Putative ribosomal RNA methyltransferase 1
(rRNA (uridine-2-O-)-methyltransferase) (JM23 protein)
[Canis familiaris]
Length = 329
Score = 360 bits (924), Expect = 3e-98
Identities = 177/300 (59%), Positives = 220/300 (73%), Gaps = 18/300 (6%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG+ S+DKRD+YYR AKE GWRARSAFKLLQ+DEEF++F+GV R VDLCAAPGSWSQVLS
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
+K+ + +VA+DLQ MAP+ GV+Q+QGDIT TA+ +I+HF+GC A
Sbjct: 61 QKI----------GGQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAKEIIQHFEGCPA 110
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHD+DE++Q+QL+LA L I THVLK GG F+AKIFRG+D +L+Y QL
Sbjct: 111 DLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQL 170
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
++FF V AKP+SSRNSSIEAFAVC+ Y PPEGF P LL+ P
Sbjct: 171 RVFFSNVLCAKPRSSRNSSIEAFAVCQGYDPPEGFLPDLTKPLLDHSYDPD--------F 222
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
L+GP ++ +PF+ CGDL+ YDSDRSYPL G Y+ P QPPI+PPY+ A LKK
Sbjct: 223 NQLDGPTRIIVPFVTCGDLSSYDSDRSYPLDLEDGSEYKYTPPTQPPISPPYQEACTLKK 282
>gb|AAH34880.1| Ftsj homolog [Mus musculus]
Length = 322
Score = 360 bits (924), Expect = 3e-98
Identities = 181/300 (60%), Positives = 219/300 (72%), Gaps = 20/300 (6%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG+ S+DKRD+YYR AKE GWRARSAFKLLQ+DEEF +F+GVKR VDLCAAPGSWSQVLS
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
+K+ + +VA+DLQ MAP+ GVIQ+QGDIT TA+ +I+HF+GC A
Sbjct: 61 QKV----------GGQGSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPA 110
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHD+DE++Q+QL+LA L I THVLK GG F+AKIFRG+D +LLY QL
Sbjct: 111 DLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQL 170
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
++FF V AKPKSSRNSSIEAFAVC+ Y PPEGF P LL +
Sbjct: 171 RIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDLTRPLL----------NHSYDF 220
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
L+GP +V +PF+ACGDL+ YDSDR+Y L G Y+ P QPPIAPPY+ A LKK
Sbjct: 221 NQLDGPTRVIVPFVACGDLSAYDSDRTYSLDLDGGSEYKYTPPTQPPIAPPYQEACRLKK 280
>emb|CAA06749.1| JM23 [Homo sapiens] gi|23270836|gb|AAH23584.1| FtsJ homolog 1,
isoform a [Homo sapiens]
gi|12643879|sp|Q9UET6|RRM1_HUMAN Putative ribosomal RNA
methyltransferase 1 (rRNA
(uridine-2'-O-)-methyltransferase) (JM23 protein)
gi|7110661|ref|NP_036412.1| FtsJ homolog 1 isoform a
[Homo sapiens]
Length = 329
Score = 357 bits (917), Expect = 2e-97
Identities = 176/300 (58%), Positives = 218/300 (72%), Gaps = 18/300 (6%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG+ S+DKRD+YYR AKE GWRARSAFKLLQ+D+EF +F+GV R VDLCAAPGSWSQVLS
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
+K+ + +VA+DLQ MAP+ GV+Q+QGDIT TA+ +I+HF GC A
Sbjct: 61 QKI----------GGQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPA 110
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHD+DE++Q+QL+LA L I THVLK GG F+AKIFRG+D +LLY QL
Sbjct: 111 DLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQL 170
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
++FF V AKP+SSRNSSIEAFAVC+ Y PPEGF P LL+ P
Sbjct: 171 QVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDPD--------F 222
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
L+GP ++ +PF+ CGDL+ YDSDRSYPL G Y+ P QPPI+PPY+ A LK+
Sbjct: 223 NQLDGPTRIIVPFVTCGDLSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKR 282
>emb|CAH90000.1| hypothetical protein [Pongo pygmaeus]
Length = 319
Score = 356 bits (913), Expect = 6e-97
Identities = 176/300 (58%), Positives = 217/300 (71%), Gaps = 18/300 (6%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG+ S+DKRD+YYR AKE GWRARSAFKLLQ+D+EF +F+GV R VDLCAAPGSWSQVLS
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
+K+ + +VA+DLQ MAP+ GV+Q+QGDIT TA+ +I+HF GC A
Sbjct: 61 QKI----------GGQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPA 110
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVC GAPDVTGLHD+DE++Q+QL+LA L I THVLK GG F+AKIFRG+D +LLY QL
Sbjct: 111 DLVVCGGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQL 170
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
++FF V AKP+SSRNSSIEAFAVC+ Y PPEGF P LL+ P
Sbjct: 171 QVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDPD--------F 222
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
L+GP ++ +PF+ CGDL+ YDSDRSYPL G Y+ P QPPI+PPY+ A LKK
Sbjct: 223 NQLDGPTRIIVPFVTCGDLSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKK 282
>gb|AAC33734.1| cell division protein [Homo sapiens] gi|29029591|ref|NP_803188.1|
FtsJ homolog 1 isoform b [Homo sapiens]
gi|29029589|ref|NP_803183.1| FtsJ homolog 1 isoform b
[Homo sapiens]
Length = 327
Score = 355 bits (911), Expect = 1e-96
Identities = 176/300 (58%), Positives = 217/300 (71%), Gaps = 20/300 (6%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG+ S+DKRD+YYR AKE GWRARSAFKLLQ+D+EF +F+GV R VDLCAAPGSWSQVLS
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
+K+ + +VA+DLQ MAP+ GV+Q+QGDIT TA+ +I+HF GC A
Sbjct: 61 QKI----------GGQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPA 110
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLHD+DE++Q+QL+LA L I THVLK GG F+AKIFRG+D +LLY QL
Sbjct: 111 DLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQL 170
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
++FF V AKP+SSRNSSIEAFAVC+ Y PPEGF P LL D
Sbjct: 171 QVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLL----------DHSYDF 220
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
L+GP ++ +PF+ CGDL+ YDSDRSYPL G Y+ P QPPI+PPY+ A LK+
Sbjct: 221 NQLDGPTRIIVPFVTCGDLSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKR 280
>ref|XP_343772.2| PREDICTED: similar to Ftsj homolog [Rattus norvegicus]
Length = 535
Score = 353 bits (905), Expect = 5e-96
Identities = 182/309 (58%), Positives = 222/309 (70%), Gaps = 27/309 (8%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG+ S+DKRD+YYR AKE+GWRARSAFKLLQ+DEEF +F+GVKR VDLCAAPGSWSQVLS
Sbjct: 85 MGRTSKDKRDVYYRLAKEKGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLS 144
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
+K+ ++ +VA+DLQ MAP+ GVIQ+QGDIT TA+ +I+HF+GC A
Sbjct: 145 QKV----------GGQSSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPA 194
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAK---------IFRGK 171
+LVVCDGAPDVTGLHD+DE++Q+QL+LA L I THVLK GG F+AK IFRG+
Sbjct: 195 DLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKVSLGEPGRVIFRGR 254
Query: 172 DTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPS 231
D +LLY QL++FF V AKPKSSRNSSIEAFAVC+ Y PPEGF P DL R L +
Sbjct: 255 DVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPPEGFIP-DLTRPLMNHSYET 313
Query: 232 GVDDTDCVSGWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPP 291
+ L GP +V +PF+ CGDL+ YDSDR+Y L G Y+ P QPPIAPP
Sbjct: 314 DFNQ-------LHGPARVIVPFVTCGDLSAYDSDRTYSLDLDNGSEYKYTPPTQPPIAPP 366
Query: 292 YKRALELKK 300
Y+ A LKK
Sbjct: 367 YQEACRLKK 375
>ref|XP_318425.2| ENSANGP00000014205 [Anopheles gambiae str. PEST]
gi|55236657|gb|EAA13594.2| ENSANGP00000014205 [Anopheles
gambiae str. PEST]
Length = 297
Score = 339 bits (870), Expect = 5e-92
Identities = 179/304 (58%), Positives = 214/304 (69%), Gaps = 15/304 (4%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MGK S+DKRDIYYR AKEEGWRARSAFKL+ IDE F IF+GV R VDLCAAPGSWSQVLS
Sbjct: 1 MGKTSKDKRDIYYRLAKEEGWRARSAFKLIHIDEVFQIFDGVTRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHF-DGCK 119
++LY P +DE I+A+DLQ M P+ G+IQ+QGDIT TAE +I HF D K
Sbjct: 61 KRLY--ESRDPAERDE--VKIIAVDLQTMGPLPGIIQLQGDITKLSTAEAIIEHFGDQQK 116
Query: 120 ANLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQ 179
A LV+CDGAPDVTGLHD+DE++QSQL+LA L I THVL GG F+AKIFRGKDTSLLY Q
Sbjct: 117 AQLVICDGAPDVTGLHDIDEYIQSQLLLAALNITTHVLTPGGTFVAKIFRGKDTSLLYSQ 176
Query: 180 LKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCV 239
L++FF VT AKP SSRNSSIEAF VC++Y PPEG+ P+ ++ +L DD +
Sbjct: 177 LRIFFERVTIAKPPSSRNSSIEAFVVCQDYRPPEGYVPQLINPML---------DDVQVI 227
Query: 240 SGWLEGP-NKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALEL 298
+ P N+ +PFL CGDL +DSD SY L Y+ D VQ P+AP Y LE
Sbjct: 228 ACETSAPVNRSIVPFLVCGDLREFDSDMSYSLNIDPEKDYEYRDVVQKPLAPAYSEVLER 287
Query: 299 KKAS 302
K +
Sbjct: 288 MKTT 291
>emb|CAB11724.1| SPAC4F10.03c [Schizosaccharomyces pombe]
gi|19115658|ref|NP_594746.1| hypothetical protein
SPAC4F10.03c [Schizosaccharomyces pombe 972h-]
gi|7492453|pir||T38807 probable cell division protein -
fission yeast (Schizosaccharomyces pombe)
gi|9910977|sp|O36015|YEK3_SCHPO Putative ribosomal RNA
methyltransferase C4F10.03c (rRNA
(uridine-2'-O-)-methyltransferase)
Length = 285
Score = 324 bits (831), Expect = 2e-87
Identities = 170/301 (56%), Positives = 216/301 (71%), Gaps = 24/301 (7%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG++S+DKRD YYR AKE+GWRARSAFKLLQ++E+FN+FEG KRVVDLCAAPGSWSQVLS
Sbjct: 1 MGRSSKDKRDAYYRLAKEQGWRARSAFKLLQLNEQFNLFEGAKRVVDLCAAPGSWSQVLS 60
Query: 61 RKLY--LPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGC 118
R+L + +A D K P+IVA+DLQPMAPI+GV +Q DIT+ T +++ HF
Sbjct: 61 RELLKNIDTSIAADEK----PMIVAVDLQPMAPIDGVCTLQLDITHPNTLSIILSHFGNE 116
Query: 119 KANLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYC 178
A+LVV DGAPDVTGLHD+DE++Q+Q++LA + VLK GGKF+AKIFRG+D SLLY
Sbjct: 117 PADLVVSDGAPDVTGLHDLDEYIQAQILLAAFNLAVCVLKPGGKFVAKIFRGRDVSLLYS 176
Query: 179 QLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDC 238
QL+L F V+ AKP+SSR SSIE+F VCE+++PP F P DL + L +D T+
Sbjct: 177 QLRLMFRKVSCAKPRSSRASSIESFVVCEDFNPPSNFQP-DLTKPL------CVIDPTNA 229
Query: 239 VSGWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALEL 298
PF+ACGDL GYD+D +YP+ +LD +QPP APPYKRA+EL
Sbjct: 230 ---------HEIAPFIACGDLDGYDADATYPVE--INMKKATLDVIQPPTAPPYKRAIEL 278
Query: 299 K 299
K
Sbjct: 279 K 279
>ref|XP_591037.1| PREDICTED: similar to FtsJ homolog 1 isoform b [Bos taurus]
Length = 327
Score = 323 bits (827), Expect = 5e-87
Identities = 165/300 (55%), Positives = 211/300 (70%), Gaps = 22/300 (7%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MG +S+DKRD+YYR AKE+GWRARSAFKLLQ+DEEF +F+GV R +DLCAAPGSWSQVLS
Sbjct: 1 MGWSSKDKRDVYYRLAKEKGWRARSAFKLLQLDEEFQLFQGVTRAIDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
+K+ + +VA+DLQ MAP+ GV+Q+QGDIT TA+ +I+HF+ C
Sbjct: 61 QKI----------GGQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAKEIIQHFEDCPT 110
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
+LVVCDGAPDVTGLH E++Q+QL+LA L + HVLK GG F+ KIFRG+D +L+Y QL
Sbjct: 111 DLVVCDGAPDVTGLHV--EYMQAQLLLAALNLAMHVLKPGGCFVGKIFRGRDVTLIYSQL 168
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
++FF V AKP+SSRNSSIEAFAVC+ Y+PPEGF P LL D
Sbjct: 169 RVFFSRVLCAKPRSSRNSSIEAFAVCKGYNPPEGFLPDLTKPLL----------DHSYDF 218
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
L+G +++ +PF+ GDL+ YDSD SYPL G Y+ P QPPI+PPY+ A LK+
Sbjct: 219 NQLDGLSRIIVPFVTSGDLSAYDSDCSYPLDLEDGSEYKCTPPRQPPISPPYQEASTLKE 278
>emb|CAA85279.2| Hypothetical protein R74.7 [Caenorhabditis elegans]
gi|9910861|sp|Q22031|RRM2_CAEEL Putative ribosomal RNA
methyltransferase R74.7 (rRNA
(uridine-2'-O-)-methyltransferase)
gi|17554650|ref|NP_497843.1| cell division-like protein
(37.6 kD) (3F295) [Caenorhabditis elegans]
Length = 337
Score = 319 bits (818), Expect = 6e-86
Identities = 171/312 (54%), Positives = 214/312 (67%), Gaps = 33/312 (10%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MGK SRDKRDIYYR AKE WRARSAFKL+QID+EF I +GV+R VDLCAAPGSWSQVLS
Sbjct: 1 MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
++LY +++ IVAIDLQPMAPI GVIQ+QGDIT+ TA VI+HF G K+
Sbjct: 61 KRLY---------EEDQEAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQVIKHFSGEKS 111
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
++V+CDGAPDVTG+H +DEF+Q++LILA I +HVLKEGG F+AKIFR +++SLLY Q+
Sbjct: 112 DIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKEGGNFLAKIFRSRNSSLLYAQM 171
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
K +F V AKP+SSR SS EAF +C +YSPPEGF P L+ + + D +
Sbjct: 172 KKYFKKVYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTMGKTSLD--ATDASAISPDIID 229
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPL------PK-----VAGGTYQSLDPVQPPIA 289
G F+ CGDL+G+DS++SYPL PK Y+ D VQPP
Sbjct: 230 G-----------FVTCGDLSGWDSEKSYPLDIDACFPKGEIDEEQKKRYEFKDVVQPPTD 278
Query: 290 PPYKRALELKKA 301
P YK AL+ KK+
Sbjct: 279 PAYKAALDKKKS 290
>emb|CAE72863.1| Hypothetical protein CBG20162 [Caenorhabditis briggsae]
Length = 331
Score = 319 bits (818), Expect = 6e-86
Identities = 173/311 (55%), Positives = 210/311 (66%), Gaps = 35/311 (11%)
Query: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
MGK SRDKRDIYYR AKE WRARSAFKL+QID+EF I +GV R VDLCAAPGSWSQVLS
Sbjct: 1 MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVTRAVDLCAAPGSWSQVLS 60
Query: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
++LY +++ IVAIDLQPMAPI GVIQ+QGDIT+ TA VI HF G KA
Sbjct: 61 KRLY---------EEDEKAKIVAIDLQPMAPIPGVIQLQGDITSVETANQVIEHFSGEKA 111
Query: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
++V+CDGAPDVTG+H +DEF+Q++LILA I +HVLK GG F+AKIFR +++SLLY Q+
Sbjct: 112 DIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKNGGNFLAKIFRSRNSSLLYAQM 171
Query: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
K +F V AKP+SSR SS EAF +C +YSPPEGF P LE + + D +
Sbjct: 172 KRYFKQVYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTMNKTSLEIKDNVT----ADVID 227
Query: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLP---KVAGGT--------YQSLDPVQPPIA 289
G F+ CGDL+G+DS++SYPL GT Y+ D VQPP
Sbjct: 228 G-----------FVTCGDLSGWDSEKSYPLDIECSFPRGTQDEDDKKRYEFKDVVQPPTD 276
Query: 290 PPYKRALELKK 300
P YK ALE KK
Sbjct: 277 PAYKEALEKKK 287
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.139 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 569,853,031
Number of Sequences: 2540612
Number of extensions: 24830703
Number of successful extensions: 53468
Number of sequences better than 10.0: 388
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 52583
Number of HSP's gapped (non-prelim): 447
length of query: 316
length of database: 863,360,394
effective HSP length: 128
effective length of query: 188
effective length of database: 538,162,058
effective search space: 101174466904
effective search space used: 101174466904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)
Medicago: description of AC149135.13