BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149134.13 - phase: 0
(163 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB11265.1| unnamed protein product [Arabidopsis thaliana] g... 65 6e-10
gb|AAQ22628.1| At5g38590/MBB18_14 [Arabidopsis thaliana] gi|3069... 61 9e-09
dbj|BAB10149.1| unnamed protein product [Arabidopsis thaliana] g... 61 9e-09
emb|CAB91591.1| putative protein [Arabidopsis thaliana] gi|11357... 60 2e-08
dbj|BAC43598.1| unknown protein [Arabidopsis thaliana] gi|306949... 60 2e-08
gb|AAD27915.1| hypothetical protein [Arabidopsis thaliana] gi|25... 60 2e-08
gb|AAS99714.1| At2g04230 [Arabidopsis thaliana] gi|42568929|ref|... 60 2e-08
gb|AAX55181.1| hypothetical protein At3g59180 [Arabidopsis thali... 59 6e-08
emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana] gi|7... 58 8e-08
gb|AAM91134.1| unknown protein [Arabidopsis thaliana] gi|1459614... 58 8e-08
dbj|BAB08840.1| unnamed protein product [Arabidopsis thaliana] g... 58 1e-07
emb|CAB91594.1| putative protein [Arabidopsis thaliana] gi|15231... 57 2e-07
ref|NP_176803.1| F-box family protein [Arabidopsis thaliana] gi|... 56 3e-07
ref|NP_193242.2| F-box protein-related [Arabidopsis thaliana] 55 5e-07
dbj|BAB11672.1| unnamed protein product [Arabidopsis thaliana] 55 9e-07
ref|NP_197658.2| F-box family protein [Arabidopsis thaliana] 55 9e-07
emb|CAB78163.1| putative protein [Arabidopsis thaliana] gi|45389... 54 1e-06
ref|NP_200467.2| F-box family protein [Arabidopsis thaliana] 54 1e-06
ref|NP_192778.2| F-box family protein [Arabidopsis thaliana] 54 1e-06
gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|1841414... 54 1e-06
>dbj|BAB11265.1| unnamed protein product [Arabidopsis thaliana]
gi|15241200|ref|NP_200448.1| F-box family protein
[Arabidopsis thaliana] gi|42573692|ref|NP_974942.1|
F-box family protein [Arabidopsis thaliana]
gi|46518439|gb|AAS99701.1| At5g56370 [Arabidopsis
thaliana] gi|51970526|dbj|BAD43955.1| unknown protein
[Arabidopsis thaliana]
Length = 421
Score = 65.1 bits (157), Expect = 6e-10
Identities = 41/107 (38%), Positives = 61/107 (56%), Gaps = 2/107 (1%)
Query: 9 PIL-SFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSI 67
P+L S HL+ DI ++ IA+++G+ L+ D+ H LP +F+ TL++
Sbjct: 72 PVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCELDFDYEHYKTEPCRLPQSLFTCGTLTV 131
Query: 68 LKLKQITLNEVPF-VNLPSLKALYLDVVTFTYYELILKLLSGCPILQ 113
LKLK ++L +V F V LK L+L+ V F E KLLS CPIL+
Sbjct: 132 LKLKNVSLKDVQFPVCFKLLKTLHLEYVIFLDKETPQKLLSSCPILE 178
>gb|AAQ22628.1| At5g38590/MBB18_14 [Arabidopsis thaliana]
gi|30693275|ref|NP_198675.2| F-box family protein
[Arabidopsis thaliana]
Length = 289
Score = 61.2 bits (147), Expect = 9e-09
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 11/115 (9%)
Query: 20 DYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILKLKQITLNEVP 79
D DI ++ IA+ R V +L+ID H ++ S F+ K+L LKL+ +TL ++P
Sbjct: 86 DIKPEDIRRWIEIAVSRHVHDLDID--HFSENENIFLSSFFACKSLVTLKLRSVTLRDIP 143
Query: 80 -FVNLPSLKALYLDVVTFTYYELILKLLSGCPILQ--------YLGTNNLVVELP 125
V LPSLK L LD V+F + + +LLS CP+L+ Y T L + +P
Sbjct: 144 SMVCLPSLKTLLLDNVSFVEGKSLQELLSICPVLEDLSVYCDDYENTKELTIVVP 198
>dbj|BAB10149.1| unnamed protein product [Arabidopsis thaliana]
gi|42573529|ref|NP_974861.1| F-box family protein
[Arabidopsis thaliana]
Length = 410
Score = 61.2 bits (147), Expect = 9e-09
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 11/115 (9%)
Query: 20 DYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILKLKQITLNEVP 79
D DI ++ IA+ R V +L+ID H ++ S F+ K+L LKL+ +TL ++P
Sbjct: 86 DIKPEDIRRWIEIAVSRHVHDLDID--HFSENENIFLSSFFACKSLVTLKLRSVTLRDIP 143
Query: 80 -FVNLPSLKALYLDVVTFTYYELILKLLSGCPILQ--------YLGTNNLVVELP 125
V LPSLK L LD V+F + + +LLS CP+L+ Y T L + +P
Sbjct: 144 SMVCLPSLKTLLLDNVSFVEGKSLQELLSICPVLEDLSVYCDDYENTKELTIVVP 198
>emb|CAB91591.1| putative protein [Arabidopsis thaliana] gi|11357653|pir||T48989
hypothetical protein F25L23.70 - Arabidopsis thaliana
Length = 491
Score = 60.1 bits (144), Expect = 2e-08
Identities = 44/114 (38%), Positives = 62/114 (53%), Gaps = 5/114 (4%)
Query: 10 ILSFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILK 69
I F L+C + + D++ ++ ++ GV +L++ S SL LPS VF+SKTL LK
Sbjct: 87 INKFSLKCGDGIEDEDVFPWILNTLRHGVSDLSLHVSPSLV--YWLPSKVFASKTLVRLK 144
Query: 70 LKQITLNEVPFVN--LPSLKALYLDVVTFTYYEL-ILKLLSGCPILQYLGTNNL 120
+ V N LP LK L LD V F ++ KLLSGCP+L+ L NL
Sbjct: 145 IGPKDGPRVKLRNVCLPKLKTLNLDSVVFEEGKIGFAKLLSGCPVLEELSLLNL 198
>dbj|BAC43598.1| unknown protein [Arabidopsis thaliana] gi|30694943|ref|NP_191480.2|
F-box family protein [Arabidopsis thaliana]
Length = 484
Score = 60.1 bits (144), Expect = 2e-08
Identities = 44/114 (38%), Positives = 62/114 (53%), Gaps = 5/114 (4%)
Query: 10 ILSFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILK 69
I F L+C + + D++ ++ ++ GV +L++ S SL LPS VF+SKTL LK
Sbjct: 87 INKFSLKCGDGIEDEDVFPWILNTLRHGVSDLSLHVSPSLV--YWLPSKVFASKTLVRLK 144
Query: 70 LKQITLNEVPFVN--LPSLKALYLDVVTFTYYEL-ILKLLSGCPILQYLGTNNL 120
+ V N LP LK L LD V F ++ KLLSGCP+L+ L NL
Sbjct: 145 IGPKDGPRVKLRNVCLPKLKTLNLDSVVFEEGKIGFAKLLSGCPVLEELSLLNL 198
>gb|AAD27915.1| hypothetical protein [Arabidopsis thaliana] gi|25411064|pir||D84455
hypothetical protein At2g04230 [imported] - Arabidopsis
thaliana
Length = 454
Score = 60.1 bits (144), Expect = 2e-08
Identities = 46/110 (41%), Positives = 59/110 (52%), Gaps = 3/110 (2%)
Query: 9 PIL-SFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFS-SKTLS 66
P+L S HL DC + ++ A RGV L +D + +TLPS +FS + +L
Sbjct: 80 PVLESLHLSFEGRTDCLHVGIWIATAFARGVRKLVLDSFYQEDQTVTLPSVLFSYNDSLE 139
Query: 67 ILKLK-QITLNEVPFVNLPSLKALYLDVVTFTYYELILKLLSGCPILQYL 115
ILKLK I L+ V L SL+ LYLD V F E + LL GCP LQ L
Sbjct: 140 ILKLKCAIDLDFPSRVCLKSLRKLYLDQVHFKDEESVCNLLCGCPSLQDL 189
>gb|AAS99714.1| At2g04230 [Arabidopsis thaliana] gi|42568929|ref|NP_178506.3| F-box
family protein [Arabidopsis thaliana]
gi|51971311|dbj|BAD44320.1| hypothetical protein
[Arabidopsis thaliana]
Length = 448
Score = 60.1 bits (144), Expect = 2e-08
Identities = 46/110 (41%), Positives = 59/110 (52%), Gaps = 3/110 (2%)
Query: 9 PIL-SFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFS-SKTLS 66
P+L S HL DC + ++ A RGV L +D + +TLPS +FS + +L
Sbjct: 89 PVLESLHLSFEGRTDCLHVGIWIATAFARGVRKLVLDSFYQEDQTVTLPSVLFSYNDSLE 148
Query: 67 ILKLK-QITLNEVPFVNLPSLKALYLDVVTFTYYELILKLLSGCPILQYL 115
ILKLK I L+ V L SL+ LYLD V F E + LL GCP LQ L
Sbjct: 149 ILKLKCAIDLDFPSRVCLKSLRKLYLDQVHFKDEESVCNLLCGCPSLQDL 198
>gb|AAX55181.1| hypothetical protein At3g59180 [Arabidopsis thaliana]
gi|7801668|emb|CAB91588.1| putative protein [Arabidopsis
thaliana] gi|15231644|ref|NP_191477.1| hypothetical
protein [Arabidopsis thaliana] gi|11357650|pir||T48986
hypothetical protein F25L23.40 - Arabidopsis thaliana
Length = 475
Score = 58.5 bits (140), Expect = 6e-08
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 16/150 (10%)
Query: 9 PILSFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSIL 68
P+ F L+C D + ++ + RGV L++D + S S LPS VF +KTL L
Sbjct: 53 PLNRFSLKCKVRCDSACVDGWIINVLDRGV--LDLDLNISSESDYKLPSEVFLNKTLVRL 110
Query: 69 KL--KQITLNEVPFVNLPSLKALYLDVVTFTYYE----LILKLLSGCPILQYLGTNNLVV 122
KL K + +V V LP LK LYL F +E KL+SGCP+L+ L +++
Sbjct: 111 KLGGKDEFIIDVEEVFLPKLKTLYLH--GFVCFEDSGVACAKLISGCPVLEEL----VMI 164
Query: 123 ELPYSERPVISLSN--LIRANICDIHIEFD 150
L + V S+SN L R IC I+++
Sbjct: 165 NLMWGLMDVCSVSNPTLKRVTICSEIIDYN 194
>emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana]
gi|7268114|emb|CAB78451.1| hypothetical protein
[Arabidopsis thaliana] gi|7485037|pir||B71402
hypothetical protein - Arabidopsis thaliana
Length = 1047
Score = 58.2 bits (139), Expect = 8e-08
Identities = 41/108 (37%), Positives = 58/108 (52%), Gaps = 3/108 (2%)
Query: 9 PILSFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSIL 68
P+ F L+ + + I ++ ++RGV +L D + ++ PS +F SKTL L
Sbjct: 340 PLHKFSLKIGDGVEPDRIIPWINNVLERGVSDL--DLHVYMETEFVFPSEMFLSKTLVRL 397
Query: 69 KLKQITLNEVPFVNLPSLKALYLDVVTFTYYEL-ILKLLSGCPILQYL 115
KL L E V LP LK LY+D F Y + + KLLSGCPIL+ L
Sbjct: 398 KLMLYPLLEFEDVYLPKLKTLYIDSCYFEKYGIGLTKLLSGCPILEDL 445
Score = 50.4 bits (119), Expect = 2e-05
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 34 IQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILKLK--QITLNEVPFVNLPSLKALYL 91
++RGV +L++ + L S+ LPS V+ KTL LKL+ +V V+LP LK LY+
Sbjct: 778 LERGVSDLDLHLN--LESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYI 835
Query: 92 DVVTFTYYEL-ILKLLSGCPILQYL 115
+ F + + + KLLSGCP+L+ L
Sbjct: 836 EATHFEEHGVGLTKLLSGCPMLEDL 860
>gb|AAM91134.1| unknown protein [Arabidopsis thaliana] gi|14596145|gb|AAK68800.1|
Unknown protein [Arabidopsis thaliana]
gi|18414140|ref|NP_567421.1| F-box family protein
[Arabidopsis thaliana]
Length = 468
Score = 58.2 bits (139), Expect = 8e-08
Identities = 41/108 (37%), Positives = 58/108 (52%), Gaps = 3/108 (2%)
Query: 9 PILSFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSIL 68
P+ F L+ + + I ++ ++RGV +L D + ++ PS +F SKTL L
Sbjct: 85 PLHKFSLKIGDGVEPDRIIPWINNVLERGVSDL--DLHVYMETEFVFPSEMFLSKTLVRL 142
Query: 69 KLKQITLNEVPFVNLPSLKALYLDVVTFTYYEL-ILKLLSGCPILQYL 115
KL L E V LP LK LY+D F Y + + KLLSGCPIL+ L
Sbjct: 143 KLMLYPLLEFEDVYLPKLKTLYIDSCYFEKYGIGLTKLLSGCPILEDL 190
>dbj|BAB08840.1| unnamed protein product [Arabidopsis thaliana]
gi|15242584|ref|NP_201102.1| F-box family protein
[Arabidopsis thaliana]
Length = 449
Score = 57.8 bits (138), Expect = 1e-07
Identities = 39/101 (38%), Positives = 60/101 (58%), Gaps = 6/101 (5%)
Query: 25 DIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILKLKQITLNEVPFV-NL 83
DI ++ IA+ R + L++DF LP +++ K+L LKL+ L +VP V +L
Sbjct: 116 DIKLWVEIAVSRCAQELSVDFFPKEKHNALLPRNLYTCKSLVTLKLRNNILVDVPHVFSL 175
Query: 84 PSLKALYLDVVTFTYYELILKLLSGCPILQYLGTNNLVVEL 124
PSLK L+L+ VT+ E + +LLS C +L+ +LVVEL
Sbjct: 176 PSLKILHLERVTYGDGESLQRLLSNCSVLE-----DLVVEL 211
>emb|CAB91594.1| putative protein [Arabidopsis thaliana]
gi|15231658|ref|NP_191483.1| F-box family protein
[Arabidopsis thaliana] gi|11357636|pir||T48992
hypothetical protein F25L23.100 - Arabidopsis thaliana
Length = 504
Score = 56.6 bits (135), Expect = 2e-07
Identities = 39/114 (34%), Positives = 64/114 (55%), Gaps = 5/114 (4%)
Query: 10 ILSFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILK 69
++ F L C N D I+ ++ I+RGV +L D + S ++PS VF SK+L L+
Sbjct: 88 LVRFSLNCRNGIDRECIFRWISNVIERGVSDL--DLGGNFVSNRSMPSSVFVSKSLVKLR 145
Query: 70 LK--QITLNEVPFVNLPSLKALYLDVVTFTYYE-LILKLLSGCPILQYLGTNNL 120
++ T+ ++ V LP LK L L + F + +LKL+SGC +L+ L ++L
Sbjct: 146 IRTENCTIIDLEDVFLPKLKTLDLSSIWFRDGDTCLLKLISGCQVLEDLTMSDL 199
>ref|NP_176803.1| F-box family protein [Arabidopsis thaliana]
gi|12324394|gb|AAG52161.1| hypothetical protein;
16490-14953 [Arabidopsis thaliana]
gi|25404605|pir||A96688 hypothetical protein T27F4.4
[imported] - Arabidopsis thaliana
Length = 453
Score = 56.2 bits (134), Expect = 3e-07
Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 12/107 (11%)
Query: 13 FHLQCWNDYDCRDI------YNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLS 66
F L+C +D D D+ + ++Y+AI+R V+++++ + + + +++ ++L
Sbjct: 101 FKLRCGSDLD-GDVDLATCSWKWIYMAIKRKVQHIDVTWPG-----VRIYPEIYNCESLV 154
Query: 67 ILKLKQITLNEVPFVNLPSLKALYLDVVTFTYYELILKLLSGCPILQ 113
LKL ++TL + FV+LPSLK L LD V F L+SGCP+L+
Sbjct: 155 SLKLSEVTLTKPEFVSLPSLKVLVLDWVEFYNEFAFDMLMSGCPVLE 201
>ref|NP_193242.2| F-box protein-related [Arabidopsis thaliana]
Length = 572
Score = 55.5 bits (132), Expect = 5e-07
Identities = 46/125 (36%), Positives = 70/125 (55%), Gaps = 11/125 (8%)
Query: 24 RDIYNFLYIAIQRGVENLNIDFS--HSLFSQMTLPSFVFSSKTLSILKLKQITLNEVP-F 80
++I ++ IA+ R V L+I+ + + + LPS ++ SK+L ILKLK L +VP
Sbjct: 261 QNIKQWIIIAVFRCVRELSINLFPLYCIENPAKLPSSLYISKSLVILKLKDQILVDVPRM 320
Query: 81 VNLPSLKALYLDVVTFTYYELILKLLSGCPILQYLGTNNLVV---ELPYSERPVISLSNL 137
LPSLK L L VT+ + +LLS CP+L+ NLVV E + E I++S+L
Sbjct: 321 AYLPSLKYLLLKRVTYKDSNSLHQLLSSCPVLK-----NLVVERDEYNHDETLSITVSSL 375
Query: 138 IRANI 142
R +
Sbjct: 376 QRLTL 380
>dbj|BAB11672.1| unnamed protein product [Arabidopsis thaliana]
Length = 450
Score = 54.7 bits (130), Expect = 9e-07
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 13/140 (9%)
Query: 11 LSFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQM--TLPSFVFSSKTLSIL 68
+SF ++ D I ++ A++R +++L +D S M TLP V+ S++L L
Sbjct: 89 ISFQMEA---VDMWTIIPWIEDAVKRRIQHLEVD---SRIDHMIDTLPLTVYLSESLVSL 142
Query: 69 KLKQITLNEVPFVNLPSLKALYLDVVTFTYYELILKLLSGCPILQYLGTNNLVVE----- 123
+L + L+ FV+LP+LK ++L+ ++Y E + K +S CP+L+ L V E
Sbjct: 143 RLHLVMLHRFVFVSLPNLKVMHLEENIYSYAETMEKFISSCPVLEDLTVVRNVDEATEKV 202
Query: 124 LPYSERPVISLSNLIRANIC 143
L S + + SL +I ++ C
Sbjct: 203 LRVSSQSLNSLKLVIDSSKC 222
>ref|NP_197658.2| F-box family protein [Arabidopsis thaliana]
Length = 315
Score = 54.7 bits (130), Expect = 9e-07
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 13/140 (9%)
Query: 11 LSFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQM--TLPSFVFSSKTLSIL 68
+SF ++ D I ++ A++R +++L +D S M TLP V+ S++L L
Sbjct: 89 ISFQMEA---VDMWTIIPWIEDAVKRRIQHLEVD---SRIDHMIDTLPLTVYLSESLVSL 142
Query: 69 KLKQITLNEVPFVNLPSLKALYLDVVTFTYYELILKLLSGCPILQYLGTNNLVVE----- 123
+L + L+ FV+LP+LK ++L+ ++Y E + K +S CP+L+ L V E
Sbjct: 143 RLHLVMLHRFVFVSLPNLKVMHLEENIYSYAETMEKFISSCPVLEDLTVVRNVDEATEKV 202
Query: 124 LPYSERPVISLSNLIRANIC 143
L S + + SL +I ++ C
Sbjct: 203 LRVSSQSLNSLKLVIDSSKC 222
>emb|CAB78163.1| putative protein [Arabidopsis thaliana] gi|4538969|emb|CAB39793.1|
putative protein [Arabidopsis thaliana]
gi|7486073|pir||T04055 hypothetical protein F24G24.200 -
Arabidopsis thaliana
Length = 326
Score = 54.3 bits (129), Expect = 1e-06
Identities = 37/95 (38%), Positives = 52/95 (53%), Gaps = 1/95 (1%)
Query: 25 DIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILKLKQITLNEVP-FVNL 83
DI ++ +A+ R + L I SH Q LPS +++ K+L ILKL L +VP V L
Sbjct: 91 DIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCL 150
Query: 84 PSLKALYLDVVTFTYYELILKLLSGCPILQYLGTN 118
PSLK L L V + + +LL CP+L+ L N
Sbjct: 151 PSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVN 185
>ref|NP_200467.2| F-box family protein [Arabidopsis thaliana]
Length = 607
Score = 54.3 bits (129), Expect = 1e-06
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 14 HLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQ-MTLPSFVFSSKTLSILKLKQ 72
HL+ Y DI ++ +A+ R V L ID LF + + LP + S TL L L
Sbjct: 83 HLKLNQKYSASDINFWVQVAVNRSVRELRID----LFGKTLELPCCLCSCITLKELTLHD 138
Query: 73 ITLNEVP-FVNLPSLKALYLDVVTFTYYELILKLLSGCPILQYL---GTNNLVVELPYSE 128
+ + VP + LPSLK L+L V F+ + +L CP+L+ L GT + V++P +
Sbjct: 139 LCIKVVPAWFRLPSLKTLHLLSVKFSSDGFVASILRICPVLERLVVDGTKGVNVKIPNMD 198
Query: 129 RP 130
P
Sbjct: 199 VP 200
Score = 39.7 bits (91), Expect = 0.029
Identities = 28/79 (35%), Positives = 46/79 (57%), Gaps = 5/79 (6%)
Query: 38 VENLNIDFSHSLFSQMTLPSFVFSSKTLSILKLKQITLNEVP-FVNLPSLKALYLDVVTF 96
+ +L+I S L ++L +F +TL L L ++++ VP +LPSL+AL+L V F
Sbjct: 296 LRSLSIRSSRELRIDLSLKTF----RTLKELILHELSIKVVPPSFSLPSLEALHLLSVKF 351
Query: 97 TYYELILKLLSGCPILQYL 115
E + LL CP+L++L
Sbjct: 352 FGDESVASLLKICPVLEHL 370
>ref|NP_192778.2| F-box family protein [Arabidopsis thaliana]
Length = 409
Score = 54.3 bits (129), Expect = 1e-06
Identities = 37/95 (38%), Positives = 52/95 (53%), Gaps = 1/95 (1%)
Query: 25 DIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSILKLKQITLNEVP-FVNL 83
DI ++ +A+ R + L I SH Q LPS +++ K+L ILKL L +VP V L
Sbjct: 91 DIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCL 150
Query: 84 PSLKALYLDVVTFTYYELILKLLSGCPILQYLGTN 118
PSLK L L V + + +LL CP+L+ L N
Sbjct: 151 PSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVN 185
>gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|18414142|ref|NP_567422.1|
F-box family protein [Arabidopsis thaliana]
Length = 381
Score = 53.9 bits (128), Expect = 1e-06
Identities = 39/110 (35%), Positives = 62/110 (55%), Gaps = 5/110 (4%)
Query: 9 PILSFHLQCWNDYDCRDIYNFLYIAIQRGVENLNIDFSHSLFSQMTLPSFVFSSKTLSIL 68
P+ F L+ + D I ++ ++RGV +L++ + L S+ LPS V+ KTL L
Sbjct: 85 PLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLN--LESEFLLPSQVYLCKTLVWL 142
Query: 69 KLK--QITLNEVPFVNLPSLKALYLDVVTFTYYEL-ILKLLSGCPILQYL 115
KL+ +V V+LP LK LY++ F + + + KLLSGCP+L+ L
Sbjct: 143 KLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLSGCPMLEDL 192
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.327 0.142 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 255,651,866
Number of Sequences: 2540612
Number of extensions: 9836057
Number of successful extensions: 30070
Number of sequences better than 10.0: 267
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 29839
Number of HSP's gapped (non-prelim): 296
length of query: 163
length of database: 863,360,394
effective HSP length: 118
effective length of query: 45
effective length of database: 563,568,178
effective search space: 25360568010
effective search space used: 25360568010
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 70 (31.6 bits)
Medicago: description of AC149134.13