BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149131.10 - phase: 0 /pseudo
(188 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana] gi|7... 79 5e-14
gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|1841414... 73 4e-12
ref|NP_173137.1| F-box family protein [Arabidopsis thaliana] gi|... 72 1e-11
dbj|BAB02027.1| unnamed protein product [Arabidopsis thaliana] 70 2e-11
ref|NP_974590.1| F-box family protein [Arabidopsis thaliana] 70 3e-11
ref|NP_193959.2| F-box family protein [Arabidopsis thaliana] 70 3e-11
gb|AAM62493.1| unknown [Arabidopsis thaliana] gi|9759325|dbj|BAB... 68 1e-10
ref|NP_563769.1| F-box family protein [Arabidopsis thaliana] 68 1e-10
pir||D86201 protein F12K11.6 [imported] - Arabidopsis thaliana g... 68 1e-10
ref|NP_175384.1| F-box family protein [Arabidopsis thaliana] 67 2e-10
emb|CAB86047.1| putative protein [Arabidopsis thaliana] gi|15242... 67 3e-10
dbj|BAB10543.1| unnamed protein product [Arabidopsis thaliana] 66 6e-10
ref|NP_178162.1| F-box family protein [Arabidopsis thaliana] gi|... 66 6e-10
ref|NP_200059.2| F-box family protein [Arabidopsis thaliana] 66 6e-10
emb|CAB88414.1| putative protein [Arabidopsis thaliana] gi|15229... 65 1e-09
dbj|BAB11272.1| unnamed protein product [Arabidopsis thaliana] g... 65 1e-09
pir||G96532 hypothetical protein F14J22.15 [imported] - Arabidop... 65 1e-09
emb|CAB88310.1| putative protein [Arabidopsis thaliana] gi|11358... 64 2e-09
dbj|BAB11265.1| unnamed protein product [Arabidopsis thaliana] g... 64 2e-09
dbj|BAB11672.1| unnamed protein product [Arabidopsis thaliana] 64 2e-09
>emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana]
gi|7268114|emb|CAB78451.1| hypothetical protein
[Arabidopsis thaliana] gi|7485037|pir||B71402
hypothetical protein - Arabidopsis thaliana
Length = 1047
Score = 79.3 bits (194), Expect = 5e-14
Identities = 49/130 (37%), Positives = 76/130 (57%), Gaps = 15/130 (11%)
Query: 17 DKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIIL----NDTDST 72
D I+SLPD+I S ILS +P +EAA+TS+LSK+W +L+ F +D D + N+T+ +
Sbjct: 694 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 753
Query: 73 YSFNDSMSSILLSRYHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAYVDIPILPVSIL 132
SF D + +L + I WIN V++ G+ L LH+++E + +LP +
Sbjct: 754 TSFMDFVDRVLALQV-RIIPWINNVLERGVS--DLDLHLNLESEF--------LLPSQVY 802
Query: 133 TCRTLVSLDL 142
C+TLV L L
Sbjct: 803 LCKTLVWLKL 812
Score = 60.8 bits (146), Expect = 2e-08
Identities = 45/147 (30%), Positives = 71/147 (47%), Gaps = 31/147 (21%)
Query: 17 DKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIIL----NDTDST 72
D I+SLP+ I ILS +P +EAA+TS+LSK+W +L+ F +D + + N+T+ +
Sbjct: 263 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 322
Query: 73 YSFNDSMSSILL----SRYH-------------NINKWINFVVQHGLKYLRLGLHISVED 115
SF D + +L S H I WIN V++ G+ L L +++ E
Sbjct: 323 SSFMDFVDRVLALQGNSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYMETEF 382
Query: 116 DDDDAYVDIPILPVSILTCRTLVSLDL 142
+ P + +TLV L L
Sbjct: 383 ----------VFPSEMFLSKTLVRLKL 399
>gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|18414142|ref|NP_567422.1|
F-box family protein [Arabidopsis thaliana]
Length = 381
Score = 73.2 bits (178), Expect = 4e-12
Identities = 51/147 (34%), Positives = 77/147 (51%), Gaps = 31/147 (21%)
Query: 17 DKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIIL----NDTDST 72
D I+SLPD+I S ILS +P +EAA+TS+LSK+W +L+ F +D D + N+T+ +
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 67
Query: 73 YSFNDSMSSILL----SRYH-------------NINKWINFVVQHGLKYLRLGLHISVED 115
SF D + +L S H I WIN V++ G+ L LH+++E
Sbjct: 68 TSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVS--DLDLHLNLES 125
Query: 116 DDDDAYVDIPILPVSILTCRTLVSLDL 142
+ +LP + C+TLV L L
Sbjct: 126 EF--------LLPSQVYLCKTLVWLKL 144
>ref|NP_173137.1| F-box family protein [Arabidopsis thaliana] gi|25518753|pir||H86304
hypothetical protein F6I1.6 - Arabidopsis thaliana
gi|9802769|gb|AAF99838.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 449
Score = 71.6 bits (174), Expect = 1e-11
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 22/146 (15%)
Query: 17 DKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIILNDTDSTYSFN 76
D+I++LPD +L QILS + +E+ TS+LSKRW +LW +D D D SF
Sbjct: 15 DRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDVFVSFV 74
Query: 77 D----SMSSILLSRY---HNINK--------WINFVVQHGLKYLRLGLHISVEDDDDDAY 121
+ S + L R+ + +N+ WIN V++ + +H V+DDD
Sbjct: 75 NRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKR--RVCHFNVHNEVDDDD---- 128
Query: 122 VDIPILPVSILTCRTLVSLDLWRVLI 147
++ +P+S+ +C LV+L L+RV +
Sbjct: 129 -ELVKMPLSLYSCERLVNLQLYRVAL 153
>dbj|BAB02027.1| unnamed protein product [Arabidopsis thaliana]
Length = 340
Score = 70.5 bits (171), Expect = 2e-11
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 4 RRRISEAATPPAVDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTD 63
RR+I EA VD I+SLPD IL ILS IP + A TS+LSKRW H+W T + F D
Sbjct: 23 RRKIKEA-----VDSISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVWCDTPSLSFND 77
Query: 64 I-----ILNDTDSTYSFNDSM----SSILLSRYHNINKWINFVVQHGLKYLRLGLHISVE 114
+++T + Y+ + M + L++ ++ WI F + + +L L L V
Sbjct: 78 YRLEAPFIDETLTRYTASKMMRFHLHTSLINNVPHLESWIKFAMSRNVDHLSLDLWNQVA 137
Query: 115 DDDDDAYVDIPILPVSILTCRTLVSLDLWRVLIFLLL 151
+ D + + L + I + + D +V + +L
Sbjct: 138 NLVDVSSLKEAKLNICIDSFSKTIKADFLQVTLLKML 174
>ref|NP_974590.1| F-box family protein [Arabidopsis thaliana]
Length = 332
Score = 70.1 bits (170), Expect = 3e-11
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 23/143 (16%)
Query: 16 VDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKF--------------TDCIDF 61
+D+IN L D+I+ ILSL+ +EA +TS+LS RW +L+ F IDF
Sbjct: 1 MDRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDF 60
Query: 62 TDIILNDTDSTYSFNDSMSSILLSRYHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAY 121
D +L T + S+ + ++ +W+ V++HG+ YL + + + +D
Sbjct: 61 VDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDI---ISED----- 112
Query: 122 VDIPILPVSILTCRTLVSLDLWR 144
DI +P+ I TC+TLV L L R
Sbjct: 113 -DIGFVPLEIFTCKTLVELKLAR 134
>ref|NP_193959.2| F-box family protein [Arabidopsis thaliana]
Length = 415
Score = 70.1 bits (170), Expect = 3e-11
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 23/143 (16%)
Query: 16 VDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKF--------------TDCIDF 61
+D+IN L D+I+ ILSL+ +EA +TS+LS RW +L+ F IDF
Sbjct: 1 MDRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDF 60
Query: 62 TDIILNDTDSTYSFNDSMSSILLSRYHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAY 121
D +L T + S+ + ++ +W+ V++HG+ YL + + + +D
Sbjct: 61 VDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDI---ISED----- 112
Query: 122 VDIPILPVSILTCRTLVSLDLWR 144
DI +P+ I TC+TLV L L R
Sbjct: 113 -DIGFVPLEIFTCKTLVELKLAR 134
>gb|AAM62493.1| unknown [Arabidopsis thaliana] gi|9759325|dbj|BAB09834.1| unnamed
protein product [Arabidopsis thaliana]
gi|15239385|ref|NP_200869.1| F-box family protein
[Arabidopsis thaliana]
Length = 388
Score = 68.2 bits (165), Expect = 1e-10
Identities = 55/173 (31%), Positives = 82/173 (46%), Gaps = 31/173 (17%)
Query: 16 VDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFT-----DCID--FTDIILND 68
+D+I+ LPDE+L +I+S +P + A +TSILSKRW LWK+ DC + D IL +
Sbjct: 1 MDRISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPKLECDCTEPALRDFILKN 60
Query: 69 TDSTYSFNDSM------SSILLSRYHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAYV 122
+S+ S L + +I W + H L+ LR+ + YV
Sbjct: 61 LPLQARIIESLYLRFRRESFL---FQDIKLWGGIAISHCLRELRIDFFSHYA----NPYV 113
Query: 123 DIPILPVSILTCRTLVSLDLWRVLIFLLLGLDFHHSMPFIWTIRSSNTFQILC 175
ILP S+ TC++LV+L LLGL +P + S T + C
Sbjct: 114 ---ILPRSLYTCKSLVTLK--------LLGLGIRVDVPRDVCLPSLKTLLLQC 155
>ref|NP_563769.1| F-box family protein [Arabidopsis thaliana]
Length = 403
Score = 68.2 bits (165), Expect = 1e-10
Identities = 43/150 (28%), Positives = 74/150 (48%), Gaps = 31/150 (20%)
Query: 17 DKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDII--LNDTDSTYS 74
D IN LPDEIL +ILSL+ ++A +TS+LSK+W L+K D ++F D + + + +++Y
Sbjct: 12 DAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASYV 71
Query: 75 FNDSMSSILLSRYHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAYV------------ 122
F +S + +++ + + ++ L L H+ +D+ A V
Sbjct: 72 FPESFKDL-------VDRTVALQCDYPIRKLSLKCHVGRDDEQRKACVGRWISNVVGRGV 124
Query: 123 ----------DIPILPVSILTCRTLVSLDL 142
+ L +LTC+TLV L L
Sbjct: 125 SEVVLRINDRGLHFLSPQLLTCKTLVKLTL 154
>pir||D86201 protein F12K11.6 [imported] - Arabidopsis thaliana
gi|6692693|gb|AAF24827.1| F12K11.6 [Arabidopsis
thaliana]
Length = 2025
Score = 68.2 bits (165), Expect = 1e-10
Identities = 43/150 (28%), Positives = 74/150 (48%), Gaps = 31/150 (20%)
Query: 17 DKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDII--LNDTDSTYS 74
D IN LPDEIL +ILSL+ ++A +TS+LSK+W L+K D ++F D + + + +++Y
Sbjct: 426 DAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASYV 485
Query: 75 FNDSMSSILLSRYHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAYV------------ 122
F +S + +++ + + ++ L L H+ +D+ A V
Sbjct: 486 FPESFKDL-------VDRTVALQCDYPIRKLSLKCHVGRDDEQRKACVGRWISNVVGRGV 538
Query: 123 ----------DIPILPVSILTCRTLVSLDL 142
+ L +LTC+TLV L L
Sbjct: 539 SEVVLRINDRGLHFLSPQLLTCKTLVKLTL 568
>ref|NP_175384.1| F-box family protein [Arabidopsis thaliana]
Length = 354
Score = 67.4 bits (163), Expect = 2e-10
Identities = 44/130 (33%), Positives = 62/130 (46%), Gaps = 18/130 (13%)
Query: 16 VDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIILNDTDSTYSF 75
VD I+SLPD IL + LSLIP + A TS+LSKRW H+W T +DF D D D F
Sbjct: 25 VDSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDFDDCYKLDVD----F 80
Query: 76 NDSMSSILLSR--------------YHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAY 121
D ++ +R I+ WI F + ++ L L + D D Y
Sbjct: 81 IDKTLALYRARKIMTFDLWITNGINLPYIDGWIKFAMSRNVENLFLSFDFRLYDVPDYLY 140
Query: 122 VDIPILPVSI 131
++ + +SI
Sbjct: 141 INSSVKQLSI 150
>emb|CAB86047.1| putative protein [Arabidopsis thaliana]
gi|15242568|ref|NP_195913.1| F-box family protein
[Arabidopsis thaliana] gi|11357913|pir||T48314
hypothetical protein F9G14.240 - Arabidopsis thaliana
Length = 469
Score = 66.6 bits (161), Expect = 3e-10
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 5 RRISEAATPPAVDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDF--- 61
+R + VD I+ LPD +L I S IP E A TS+LSKRW H+W T + F
Sbjct: 16 KRSKNVSVDVGVDSISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSFEWL 75
Query: 62 --TDIILNDTDSTYSFNDSMSSILLSRY------HNINKWINFVVQHGLKYLRL 107
+ ++N T ++Y+ + S L +RY H++N I F + H + L L
Sbjct: 76 KVSPKLINKTLASYTASKIKSFHLCTRYSYEADTHHVNSSIEFAMSHNVDDLSL 129
>dbj|BAB10543.1| unnamed protein product [Arabidopsis thaliana]
Length = 331
Score = 65.9 bits (159), Expect = 6e-10
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 13/140 (9%)
Query: 3 RRRRISEAATPPAVDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFT 62
R +RI E D+I+SLPD++L QIL L+P+++A T ILSKRW ++W ++++
Sbjct: 4 RCQRIDEEVVASR-DEISSLPDDLLIQILLLVPIKDAVGTMILSKRWRYVWTLLPKLEYS 62
Query: 63 DIILNDTDSTYSFNDSMSSILLSRYHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAYV 122
D ++ +S + F + + + L + + +V ++ L L LH + E
Sbjct: 63 D-PGDECESVWKFLEKL--LELHKAPFLETLCIQLVDRFVRKLELELHWTAEPTS----- 114
Query: 123 DIPILPVSILTCRTLVSLDL 142
LP S+ TC+TLV L L
Sbjct: 115 ----LPKSLYTCKTLVELTL 130
>ref|NP_178162.1| F-box family protein [Arabidopsis thaliana] gi|25406666|pir||E96836
hypothetical protein T21F11.20 [imported] - Arabidopsis
thaliana gi|6730732|gb|AAF27122.1| hypothetical protein;
62270-60714 [Arabidopsis thaliana]
Length = 464
Score = 65.9 bits (159), Expect = 6e-10
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 22/145 (15%)
Query: 17 DKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIILNDTDSTYSFN 76
D I+ L D++L QILS +P E+ TS +SKRW +LW+ +D F
Sbjct: 15 DWISGLADDLLLQILSKVPTRESVFTSRMSKRWRNLWRHVPALDLDSSKFPHESDLEDFF 74
Query: 77 DSM----SSILLSRY---HNINKW--------INFVVQHGLKYLRLGLHISVEDDDDDAY 121
DS ++ + R+ +N+ + I+ VV+ GLK L + +++EDD
Sbjct: 75 DSFLQFDGNLKIERFKWIYNVEEHCDPEFVSRIDHVVKRGLKDLTILSKVNIEDDS---- 130
Query: 122 VDIPILPVSILTCRTLVSLDLWRVL 146
+PVS+ +C TLV+L L+ V+
Sbjct: 131 ---VRMPVSLYSCATLVNLTLYSVV 152
>ref|NP_200059.2| F-box family protein [Arabidopsis thaliana]
Length = 369
Score = 65.9 bits (159), Expect = 6e-10
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 3 RRRRISEAATPPAVDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFT 62
R +RI E D+I+SLPD++L QIL L+P+++A T ILSKRW ++W ++++
Sbjct: 4 RCQRIDEEVVASR-DEISSLPDDLLIQILLLVPIKDAVGTMILSKRWRYVWTLLPKLEYS 62
Query: 63 DIILNDTDSTYSFNDSMSSILLSRYHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAYV 122
D D S+ ++ K + V ++ L L LH + E
Sbjct: 63 DP-----------GDECESV------DVGKLVANAVDRFVRKLELELHWTAEPTS----- 100
Query: 123 DIPILPVSILTCRTLVSLDL 142
LP S+ TC+TLV L L
Sbjct: 101 ----LPKSLYTCKTLVELTL 116
>emb|CAB88414.1| putative protein [Arabidopsis thaliana]
gi|15229856|ref|NP_189992.1| F-box family protein
[Arabidopsis thaliana] gi|11357661|pir||T49122
hypothetical protein F26G5.10 - Arabidopsis thaliana
Length = 427
Score = 65.1 bits (157), Expect = 1e-09
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 26/143 (18%)
Query: 19 INSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIIL-NDTDSTYSFND 77
++ LPD++L QIL L+P +EA +TS+LSKRW L+ +D +DF D I D SFND
Sbjct: 1 MDCLPDDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDFHDPISGRPEDILKSFND 60
Query: 78 SMSSILLSR------------------YHNINKWINFVVQHGLKYLRLGLHISVEDDDDD 119
+ S L + YH +++WI ++HG+ L L L +
Sbjct: 61 FVDSSLAFQGGKHIKKFSLHTKIKTFEYHVLDRWICNALEHGVSELHLHLM-------HE 113
Query: 120 AYVDIPILPVSILTCRTLVSLDL 142
++ + +P + TLV L L
Sbjct: 114 SWPWLFSIPSKVFNSSTLVKLSL 136
>dbj|BAB11272.1| unnamed protein product [Arabidopsis thaliana]
gi|15241216|ref|NP_200455.1| F-box family protein
[Arabidopsis thaliana]
Length = 430
Score = 65.1 bits (157), Expect = 1e-09
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 34/176 (19%)
Query: 16 VDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIILNDTD--STY 73
+D+I+ LPD+++ +ILS +P + +T++LSKRW +LWK +D+ D L DT+
Sbjct: 1 MDRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYRDPSLVDTEHWRAS 60
Query: 74 SFNDS---------MSSILLSRYHN-----INKWINFVVQHGLKYLRLGLHISVEDDDDD 119
F D + ++ LS N I WI+ + ++ L + +I
Sbjct: 61 RFVDKFLLLHEAPVLETLHLSLSRNCPPSDIETWISVAISRRVRNLHIYRYIPSTG---- 116
Query: 120 AYVDIPI-LPVSILTCRTLVSLDLWRVLIFLLLGLDFHHSMPFIWTIRSSNTFQIL 174
PI LP S+ TC TLVSL +LLL + PF++ RS +L
Sbjct: 117 -----PIRLPRSLYTCETLVSL-------YLLLDFTVDDA-PFMFCFRSLKVLVLL 159
>pir||G96532 hypothetical protein F14J22.15 [imported] - Arabidopsis thaliana
gi|10120422|gb|AAG13047.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 175
Score = 65.1 bits (157), Expect = 1e-09
Identities = 42/122 (34%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 16 VDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIILNDTDSTYSF 75
VD I+SLPD IL + LSLIP + A TS+LSKRW H+W T +DF D D D F
Sbjct: 25 VDSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDFDDCYKLDVD----F 80
Query: 76 NDSMSSILLSR--------------YHNINKWINFVVQHGLKYLRLGLHISVEDDDDDAY 121
D ++ +R I+ WI F + ++ L L + D D Y
Sbjct: 81 IDKTLALYRARKIMTFDLWITNGINLPYIDGWIKFAMSRNVENLFLSFDFRLYDVPDYLY 140
Query: 122 VD 123
++
Sbjct: 141 IN 142
>emb|CAB88310.1| putative protein [Arabidopsis thaliana] gi|11358158|pir||T49176
hypothetical protein T20N10.280 - Arabidopsis thaliana
Length = 455
Score = 64.3 bits (155), Expect = 2e-09
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 29/152 (19%)
Query: 16 VDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKF-------------------- 55
+D++++LPD + ILS +P + A TS+LSK W +LWK
Sbjct: 1 MDRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAE 60
Query: 56 -----TDCIDFTDIILNDTDSTYSFNDSMSSILLSRYHNINKWINFVVQHGLKYLRLGLH 110
+DF D +L D + S+ I ++N+WI V+Q G+ L L +
Sbjct: 61 RLEIRQSFVDFVDRVLALQDDSPIDRFSLKCITGIHPDHVNRWICNVLQRGVSDLDLFID 120
Query: 111 ISVEDDDDDAYVDIPILPVSILTCRTLVSLDL 142
S ED +D +LP + +TLV L +
Sbjct: 121 FSYEDTQEDE----DMLPQEMFVSKTLVKLKI 148
>dbj|BAB11265.1| unnamed protein product [Arabidopsis thaliana]
gi|15241200|ref|NP_200448.1| F-box family protein
[Arabidopsis thaliana] gi|42573692|ref|NP_974942.1|
F-box family protein [Arabidopsis thaliana]
gi|46518439|gb|AAS99701.1| At5g56370 [Arabidopsis
thaliana] gi|51970526|dbj|BAD43955.1| unknown protein
[Arabidopsis thaliana]
Length = 421
Score = 64.3 bits (155), Expect = 2e-09
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 25/146 (17%)
Query: 16 VDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIILNDTDSTY-- 73
+D I+ LPD+ L +ILSL+P ++ TS+LSKRW +LWK + ++ I N T+
Sbjct: 1 MDSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYSLIDKNADHGTFVR 60
Query: 74 ----SFNDSMSSILLSRYHNINK---------WINFVVQHGLKYLRLGLHISVEDDDDDA 120
S SM+ +L S + + + W+ V+ GL L D D +
Sbjct: 61 FVDRSLLLSMAPVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCEL---------DFDYEH 111
Query: 121 YVDIPI-LPVSILTCRTLVSLDLWRV 145
Y P LP S+ TC TL L L V
Sbjct: 112 YKTEPCRLPQSLFTCGTLTVLKLKNV 137
>dbj|BAB11672.1| unnamed protein product [Arabidopsis thaliana]
Length = 450
Score = 63.9 bits (154), Expect = 2e-09
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 30/149 (20%)
Query: 17 DKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIILNDTDSTY--- 73
D+I+SLPD +LSQILS +P E A TSILS RW LW T +D DI D +T+
Sbjct: 13 DRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLDI-DIDAFDDATTFISF 71
Query: 74 ------SFNDSMSSILLSRYH-------NINKWINFVVQHGLKYLRLGLHISVEDDDDDA 120
SF DS L + I WI V+ +++L + D+
Sbjct: 72 ATRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQHLEV-----------DS 120
Query: 121 YVD--IPILPVSILTCRTLVSLDLWRVLI 147
+D I LP+++ +LVSL L V++
Sbjct: 121 RIDHMIDTLPLTVYLSESLVSLRLHLVML 149
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.327 0.141 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 324,173,263
Number of Sequences: 2540612
Number of extensions: 12857316
Number of successful extensions: 41620
Number of sequences better than 10.0: 495
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 41012
Number of HSP's gapped (non-prelim): 566
length of query: 188
length of database: 863,360,394
effective HSP length: 120
effective length of query: 68
effective length of database: 558,486,954
effective search space: 37977112872
effective search space used: 37977112872
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 71 (32.0 bits)
Medicago: description of AC149131.10