BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149129.7 + phase: 0
(726 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN18203.1| At2g44720/F16B22.21 [Arabidopsis thaliana] gi|201... 716 0.0
emb|CAE04337.2| OSJNBb0038F03.1 [Oryza sativa (japonica cultivar... 677 0.0
gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein ... 433 e-120
gb|AAN04093.1| water-stress protein [Zea mays] 427 e-118
gb|AAC27474.1| unknown protein [Arabidopsis thaliana] gi|7485543... 259 2e-67
ref|XP_477932.1| water-stress protein-like protein [Oryza sativa... 237 1e-60
ref|XP_476864.1| putative RRM RNA binding protein NSAP1 [Oryza s... 210 1e-52
gb|AAC27473.1| putative heterogeneous nuclear ribonucleoprotein ... 186 2e-45
emb|CAB89227.1| putative RNA binding protein [Arabidopsis thalia... 130 2e-28
gb|AAM47474.1| AT4g00830/A_TM018A10_14 [Arabidopsis thaliana] gi... 122 3e-26
gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP d... 121 7e-26
gb|AAP52145.1| putative RNA-binding protein [Oryza sativa (japon... 120 2e-25
gb|AAO72701.1| putative RNA-binding protein [Oryza sativa (japon... 119 3e-25
emb|CAB80892.1| putative protein [Arabidopsis thaliana] gi|22528... 109 3e-22
gb|AAP52302.1| hypothetical protein [Oryza sativa (japonica cult... 102 4e-20
gb|AAH50079.1| Syncrip protein [Mus musculus] 98 8e-19
gb|AAD38198.1| NSAP1 protein [Homo sapiens] 97 2e-18
ref|XP_532223.1| PREDICTED: similar to NS1-associated protein 1 ... 96 3e-18
gb|AAH40844.1| SYNCRIP protein [Homo sapiens] 96 3e-18
gb|AAH15575.1| SYNCRIP protein [Homo sapiens] 96 3e-18
>gb|AAN18203.1| At2g44720/F16B22.21 [Arabidopsis thaliana]
gi|20147226|gb|AAM10328.1| At2g44720/F16B22.21
[Arabidopsis thaliana] gi|30689808|ref|NP_850422.1| RNA
recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 809
Score = 716 bits (1848), Expect = 0.0
Identities = 408/745 (54%), Positives = 506/745 (67%), Gaps = 64/745 (8%)
Query: 14 EVKESIDEYEKDEHLDFEDNYHEYDPEEYVGDDDYDERGIEQDEGQ---EAGDEVEEEPE 70
EV+ES+D++ KDE LD +DN EY+ EEY G ++++ER + Q++ + E G+E+EEE E
Sbjct: 97 EVEESVDDFGKDERLDLDDNEPEYEAEEY-GGEEFEERELGQEDHELVNEEGEELEEEIE 155
Query: 71 ENVDEEEGDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEEQVEVI 130
V+EE G+ DE + E +++ +DDD D+HA EE H DV+EEE +V+
Sbjct: 156 --VEEEAGEFADEIGDGAE----DLDSEDDD----DDHAIEEVKHGETVDVEEEEHHDVL 205
Query: 131 KETQKQKELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETV 190
E +K+KE E+FVG LDK A+E DL+KVF VGE+TEVR+ NPQTK++KG A LRF TV
Sbjct: 206 HERRKRKEFEIFVGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATV 265
Query: 191 EHVKRALAELKNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFK 250
E KRA+ ELK+P+INGK+CG+T + QD+DTL++ NICK W EAL+EKLKHYGVE+
Sbjct: 266 EQAKRAVKELKSPMINGKKCGVTAS--QDNDTLFVGNICKIWTPEALREKLKHYGVENMD 323
Query: 251 DLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDKPAEVSFANSFIDLG 310
D+TL+ED NN N G AFLEFSS SD+ DA+KRL K DV+FGV+KPA+VSF +SF+DL
Sbjct: 324 DITLVEDSNNVNMNRGYAFLEFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLE 383
Query: 311 DDIMAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHA 370
D+IMAQVKT+FID L PSW+E+ VR LLK YG +EKVELA+NMP ARRK++GFVTF TH
Sbjct: 384 DEIMAQVKTIFIDGLLPSWNEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHE 443
Query: 371 AAVECAESITSAGLGEGNKKAKVRARLSRPLPKV-RGKHVPHRDISGRK-IGRLERPSRS 428
AAV CA+ I ++ LGEG KAKVRARLSRPL K +G+ D R GR R S +
Sbjct: 444 AAVSCAKFINNSELGEGEDKAKVRARLSRPLQKAGKGRQSSRSDQRSRHGAGRSGRSSFA 503
Query: 429 RPAPRSRPAPQSRPAHVFRRLGSRIPPA---RPSSARNRRPVTSI--------------- 470
R PRS + +S R GSR P + R S +R RRP +
Sbjct: 504 RLPPRSLASSRSA-----RGAGSRAPSSSAKRASGSRGRRPRPPLPPPARARPLPPPARA 558
Query: 471 -----PVRARPASPPARSYRRL--AAAYPKSSMKRDYGRPVDLPPPRSRVSADYGSQVVS 523
P RARP PPARSY R YPK+S+KRDY R +LPPPRSR + Y S++
Sbjct: 559 RPMPPPARARPLPPPARSYDRRPPVPLYPKASLKRDYDRRDELPPPRSRPAVSYSSRLSP 618
Query: 524 QRGPSYR-DYPARDSGYPDLHRDTSRTAPRRGYLDDGYDRRLERPPSPSPRLSYREGRPR 582
+R SYR DYP R SGY DL R +SR+ RR ++DD Y R ERPP SY EGRPR
Sbjct: 619 ERHLSYRDDYPPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFERPP------SYSEGRPR 672
Query: 583 DYDALSGSKRPYAAIDDISPRYADAGARQSRSRLDYDYGGSASRYREAYGDRLERSSLGY 642
Y+ L GSKRPYAA+DD+ PRYAD R SR RLDYD G S+Y E+YGDR+ RSSLGY
Sbjct: 673 AYEPLPGSKRPYAALDDLPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDRIPRSSLGY 730
Query: 643 SGSRSSLSNQNSHGAYSSRQDPSYGRGSLGGSD-GGIYSSSYGGDYLSRGSDVGGSSYSS 701
SR+S+SN +S G YSSRQ YG GS GSD GG+YSSSYGGD R D GGSSYSS
Sbjct: 731 GSSRNSMSNHDSRGPYSSRQGMDYGGGSYSGSDVGGMYSSSYGGDLPRR--DGGGSSYSS 788
Query: 702 MYSSRGMNGSSSYMSGSGGGSRSYY 726
+YSSRG+ GSS SGGG SYY
Sbjct: 789 IYSSRGLGGSSY----SGGGPGSYY 809
>emb|CAE04337.2| OSJNBb0038F03.1 [Oryza sativa (japonica cultivar-group)]
gi|38345947|emb|CAE04271.2| OSJNBb0103I08.18 [Oryza
sativa (japonica cultivar-group)]
gi|50927259|ref|XP_473377.1| OSJNBb0103I08.18 [Oryza
sativa (japonica cultivar-group)]
Length = 774
Score = 677 bits (1746), Expect = 0.0
Identities = 386/734 (52%), Positives = 487/734 (65%), Gaps = 51/734 (6%)
Query: 9 ADNGEEVKESIDEYEKD--EHLDFEDNYHEYDPEEYVGDDDYDERGIEQDEGQ-EAGDEV 65
A +GE+ + + YE+D E L+FED EY+ E V DYDE+ +EQ E Q E GDEV
Sbjct: 76 ASHGEDEGTTKETYEEDKGERLEFEDE-PEYEEEAAV---DYDEKDLEQYEEQYEDGDEV 131
Query: 66 EEEPEENVDEEEGDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEE 125
E E+ ++EE + V EE++G DD E+A EE H DV++EE
Sbjct: 132 VEYTEDVIEEE-----------TDMVDEELDGGDDGEGEGYENAEEE----HNVDVEDEE 176
Query: 126 QVEVIKETQKQKELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALL 185
E++KE +K+KE EVFVGGLDK+ATE DLRKVF +VGEITEVR+ +NP TK+NKGFA L
Sbjct: 177 HHEMVKEHRKRKEFEVFVGGLDKDATESDLRKVFGEVGEITEVRLMMNPVTKKNKGFAFL 236
Query: 186 RFETVEHVKRALAELKNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYG 245
R+ TVE +RA++ELKNP + GKQCG+ + D+DTL++ NICK+W KE LKEKLK YG
Sbjct: 237 RYATVEQARRAVSELKNPSVRGKQCGVAPS--HDNDTLFVGNICKTWTKEHLKEKLKSYG 294
Query: 246 VESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDKPAEVSFANS 305
VE+F DL L+ED NN G N G A LEFS+ ++ DA++RLQK DVVFGVD+ A+VSFA+S
Sbjct: 295 VENFDDLLLVEDSNNPGMNRGYALLEFSTRPEAMDAFRRLQKRDVVFGVDRSAKVSFADS 354
Query: 306 FIDLGDDIMAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVT 365
+ ++ D+IMAQV+TVFID LPPSWDED V+ LKKYGA+EKVELA+NMP A+RK++GFVT
Sbjct: 355 YPEVDDEIMAQVRTVFIDGLPPSWDEDRVKKYLKKYGAIEKVELARNMPAAKRKDFGFVT 414
Query: 366 FGTHAAAVECAESITSAGLGEGNKKAKVRARLSRPLPK-VRGKHVPHRDIS-GRKIGRLE 423
F TH AV CA+ IT++ +GEG+ KAKVRARLSRPL + R KH + G+ R
Sbjct: 415 FDTHDNAVACADGITNSEIGEGDSKAKVRARLSRPLQRPPRMKHGLRGNFRVGQGAPRGG 474
Query: 424 RPSRSRPAPRSRPAPQSRPAHVFRRLGSRIPP-------ARPSSARNRRPVTSIPVRARP 476
R + RP P RP P+ + R SR+PP RP R+RRPV SIP R R
Sbjct: 475 RFAYDRPPPLRRPPPR-----LLRPDVSRLPPPVRSRPLKRPVDIRDRRPVMSIPDRVRR 529
Query: 477 ASPPARSYRRL--AAAYPKSSMKRDYGRPVDLPPPRSRVS-ADYGSQVVSQRGPSYRDYP 533
PP RSY R A YPK S +R+YGR +LPPPRSR + DY S+V R P DY
Sbjct: 530 LPPPERSYDRRPPAPVYPKRSPRREYGRRDELPPPRSRATFGDYSSRVPVDRRPYRDDYS 589
Query: 534 ARDSGYPDL-HRDTSRTAPRRGYLDDGYDRRLERPPSPSPRLSYREGRPRDYDALSGSKR 592
R S Y DL R R + RR Y+DDGY +++RP +YREGR RDYD +SGSKR
Sbjct: 590 PRGSAYSDLGPRSAPRLSDRRAYIDDGYGGKIDRPLP-----TYREGRGRDYDTMSGSKR 644
Query: 593 PYAAIDDISPRYADAGARQSRSRLDYDYGGSASRYREAYGDRLERSSLGYSGSRSSLSNQ 652
YA +DD+ PRY D RQS++RLDYD GGS++RY + Y +RL RS GYSG RS +
Sbjct: 645 SYAEMDDVPPRYHDISVRQSKARLDYDVGGSSARYADTYSERLGRSHAGYSGGRSVSGHD 704
Query: 653 NSHGAYSSRQDPSYGRGSLGGSDGGIYSSSYGGDYLSRGSDVGGSSYSSMYSSRGMNGSS 712
+ S R SYG + GG+YSS++ G Y+SRGSDVGGSSYSS+YS R + SS
Sbjct: 705 PVYS--SGRHGMSYGGSASSNDAGGMYSSNFSGSYMSRGSDVGGSSYSSLYSGRNVGSSS 762
Query: 713 SYMSGSGGGSRSYY 726
Y GS GS SYY
Sbjct: 763 GYYGGS--GSSSYY 774
>gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera]
Length = 342
Score = 433 bits (1114), Expect = e-120
Identities = 222/342 (64%), Positives = 265/342 (76%), Gaps = 6/342 (1%)
Query: 115 HEHLADVKEEEQVEVIKETQKQKELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNP 174
H + D ++EE EV KE +K+KE EVFVGGLDK+ATE DL+KVFS+VGE+TEVR+ +NP
Sbjct: 7 HAEMVDAEDEEHHEVFKERRKRKEFEVFVGGLDKDATEDDLKKVFSQVGEVTEVRLMMNP 66
Query: 175 QTKRNKGFALLRFETVEHVKRALAELKNPVINGKQCGITITTCQDSDTLYLDNICKSWKK 234
QTK+NKGFA LRF TVE KRA+ ELKNPV+NGKQCG+T + QDSDTL+L NICK+W K
Sbjct: 67 QTKKNKGFAFLRFATVEQAKRAVTELKNPVVNGKQCGVTPS--QDSDTLFLGNICKTWTK 124
Query: 235 EALKEKLKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGV 294
EALKEKLKHYGVE+ +DLTL+ED NNEG N G AFLEFS SD+ DA+KRLQ+ VFGV
Sbjct: 125 EALKEKLKHYGVENVEDLTLVEDSNNEGMNRGFAFLEFSFRSDAMDAFKRLQEERCVFGV 184
Query: 295 DKPAEVSFANSFIDLGDDIMAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMP 354
D+ A+VSF +SFID GD+IMAQVKTVFID LP SWDED VR LLKKYG +EK+ELA+NMP
Sbjct: 185 DRTAKVSFTDSFIDPGDEIMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMP 244
Query: 355 GARRKNYGFVTFGTHAAAVECAESITSAGLGEGNKKAKVRARLSRPLPKVRGKHVPHRDI 414
A+RK++GFVTF TH AAV CA+SI +A LGEG KAKVRARLSRPL + +GKH+ D
Sbjct: 245 SAKRKDFGFVTFDTHDAAVTCAKSINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDF 304
Query: 415 SGRKIGRLERPSRSRPAPRSRPAPQSRPAHVFRRLGSRIPPA 456
+ G P R +RPA +S P R LG R+PPA
Sbjct: 305 RPGRGG----PVRGVRGSWARPALRSFPGRGARGLGPRLPPA 342
>gb|AAN04093.1| water-stress protein [Zea mays]
Length = 480
Score = 427 bits (1097), Expect = e-118
Identities = 251/486 (51%), Positives = 311/486 (63%), Gaps = 29/486 (5%)
Query: 254 LLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDKPAEVSFANSFIDLGDDI 313
LL NN G N G A LEFS+ ++ DA++ LQK DVVFGVD+ A+VSFA+S+ + D+I
Sbjct: 11 LLRTPNNPGMNRGYALLEFSTRPEAMDAFRTLQKRDVVFGVDRSAKVSFADSYPQVDDEI 70
Query: 314 MAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAV 373
MAQV+TVF+D LPPSWDED V+ LKKYGA+EKVELA+NMP A+RK++GFVTF TH AV
Sbjct: 71 MAQVRTVFLDGLPPSWDEDRVKKYLKKYGAIEKVELARNMPAAKRKDFGFVTFDTHDNAV 130
Query: 374 ECAESITSAGLGEGNKKAKVRARLSRPLPK-VRGKH-------VPHRDISGRKIGRLERP 425
C E ++++ +GEG KAKVRARLSRPL + R KH V H G ++ P
Sbjct: 131 ACTEGMSNSEIGEGEHKAKVRARLSRPLQRPPRMKHGLRGNFRVGHGAPRGGRLPYSRAP 190
Query: 426 SRSRPAPR-SRPAPQSRPAHVFRRLGSRIPPARPSSARNRRPVTSIPVRARPASPPARSY 484
RP PR RPA P+ + S P RP R+RRP S+P RAR PP RSY
Sbjct: 191 PPRRPPPRLIRPAVSRLPS-----IRSH-PLKRPIDIRDRRPAMSMPDRAR-RFPPERSY 243
Query: 485 RRL--AAAYPKSSMKRDYGRPVDLPPPRSRVSADYGSQVVSQRGPSYR-DYPARDSGYPD 541
R A Y K S +R+YGR +LPPPRSR + DY ++V R PS R DY R SGY D
Sbjct: 244 DRRPPAPVYLKRSPRREYGRRDELPPPRSRATTDYITRVPVDRRPSLRDDYSPRGSGYSD 303
Query: 542 L-HRDTSRTAPRRGYLDDGYDRRLERPPSPSPRLSYREGRPRDYDALSGSKRPYAAIDDI 600
L R R + RR Y DD Y + +R P ++YREGR RDYD +SGSKRPYA +DD+
Sbjct: 304 LGPRSAPRLSDRRAYADDSYGEKFDR-----PLVAYREGRGRDYDTISGSKRPYADMDDV 358
Query: 601 SPRYADAGARQSRSRLDYDYGGSASRYREAYGDRLERSSLGYSGSRSSLSNQNSHGAYSS 660
PRY + G RQS++RLDYD GGS++RY + Y +R R GYS SRS + +++G SS
Sbjct: 359 -PRYQEIGVRQSKARLDYDIGGSSARYGDTYSERSGRPHAGYSSSRSIPVHDSAYG--SS 415
Query: 661 RQDPSYGRGSLGGSDGGIYSSSYGGDYLSRGSDVGGSSYSSMYSSRGMNGSSSYMSGSGG 720
R SYG + GG+Y SY G Y SRGSDVGGSSYSS+YS R + SS G G
Sbjct: 416 RHGMSYGGSASSADAGGMYPPSYSGSYGSRGSDVGGSSYSSLYSGRNLGTSSGGYYG-GS 474
Query: 721 GSRSYY 726
GS SYY
Sbjct: 475 GSSSYY 480
>gb|AAC27474.1| unknown protein [Arabidopsis thaliana] gi|7485543|pir||T01599
hypothetical protein At2g44720 [imported] - Arabidopsis
thaliana
Length = 239
Score = 259 bits (662), Expect = 2e-67
Identities = 143/238 (60%), Positives = 166/238 (69%), Gaps = 16/238 (6%)
Query: 491 YPKSSMKRDYGRPVDLPPPRSRVSADYGSQVVSQRGPSYRD-YPARDSGYPDLHRDTSRT 549
YPK+S+KRDY R +LPPPRSR + Y S++ +R SYRD YP R SGY DL R +SR+
Sbjct: 16 YPKASLKRDYDRRDELPPPRSRPAVSYSSRLSPERHLSYRDDYPPRGSGYSDLPRSSSRS 75
Query: 550 APRRGYLDDGYDRRLERPPSPSPRLSYREGRPRDYDALSGSKRPYAAIDDISPRYADAGA 609
RR ++DD Y R ERPPS Y EGRPR Y+ L GSKRPYAA+DD+ PRYAD
Sbjct: 76 EIRRPFVDDLYSPRFERPPS------YSEGRPRAYEPLPGSKRPYAALDDLPPRYADVDV 129
Query: 610 RQSRSRLDYDYGGSASRYREAYGDRLERSSLGYSGSRSSLSNQNSHGAYSSRQDPSYGRG 669
R SR RLDYD G S+Y E+YGDR+ RSSLGY SR+S+SN +S G YSSRQ YG G
Sbjct: 130 RHSRPRLDYDVG--PSQYGESYGDRIPRSSLGYGSSRNSMSNHDSRGPYSSRQGMDYGGG 187
Query: 670 SLGGSD-GGIYSSSYGGDYLSRGSDVGGSSYSSMYSSRGMNGSSSYMSGSGGGSRSYY 726
S GSD GG+YSSSYGGD R D GGSSYSS+YSSRG+ GSS SGGG SYY
Sbjct: 188 SYSGSDVGGMYSSSYGGDLPRR--DGGGSSYSSIYSSRGLGGSSY----SGGGPGSYY 239
>ref|XP_477932.1| water-stress protein-like protein [Oryza sativa (japonica
cultivar-group)] gi|34395354|dbj|BAC84424.1|
water-stress protein-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 465
Score = 237 bits (604), Expect = 1e-60
Identities = 142/369 (38%), Positives = 223/369 (59%), Gaps = 27/369 (7%)
Query: 43 VGDDDYDERGIEQDEGQEAGDEVEEEPEENVDEEEGDTGDEEVEEVEYVYEEVEGDDDDV 102
V +D+D ++G+EA E EEEPEE V+E G +EV +E EE E ++
Sbjct: 12 VAHEDWD-----WEKGEEAEAE-EEEPEEVVEE-----GKKEVVVLE---EEEEEEEPHE 57
Query: 103 AGDDEHASEENVHEHLADVKEEEQVEVIKETQKQKELEVFVGGLDKEATEHDLRKVFSKV 162
+E EE V E A V EE EV +K+K+ EV VGGL ++A E D+ + +
Sbjct: 58 VIMEEEVVEEVVEEEAA-VAEEVDGEV---RRKRKDCEVLVGGLPRDAAEEDVARALADA 113
Query: 163 GEITEVRMTVNPQTKR-NKGFALLRFETVEHVKRALAELKNPVINGKQCGITITTCQD-- 219
G++ EVR+ +P R NKGFA +RF + A +++ ++ G+ C I C++
Sbjct: 114 GDVEEVRLVRDPADPRSNKGFAFVRFAAAWQARWAADDVRTAMVKGEACMI----CKNDA 169
Query: 220 SDTLYLDNICKSWKKEALKEKLKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSK 279
++TL+L NIC W K+ L E+LK Y +E+ +D+ L+ED +G N G AFL+F ++ D
Sbjct: 170 NETLHLRNICFDWTKDDLAEELKTYKLENLEDINLVEDPERKGKNRGYAFLDFRTNVDGV 229
Query: 280 DAYKRLQKTDVVFGVDKPAEVSFANSFIDLGDDIMAQVKTVFIDLLPPSWDEDYVRALLK 339
DA+ +LQ D+ G D A+VSF+ + + L D IM +VK+VF+D LPP WDED VR +
Sbjct: 230 DAFFKLQNRDIYLGTDVRAQVSFSKT-LSLDDKIMEKVKSVFLDGLPPHWDEDKVREVFG 288
Query: 340 KYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVECAESITSAGLGEGNKKAKVRARLSR 399
K+G ++ + LA+NM A+RK++GF+ F + +A++C +++ G+ EG+ K +++A L R
Sbjct: 289 KFGEIDSIHLARNMFKAKRKDFGFIGFTSRQSALDCISTVSKGGIVEGSGKVRIKASLQR 348
Query: 400 PLPKVRGKH 408
P P ++ KH
Sbjct: 349 PRPTLK-KH 356
>ref|XP_476864.1| putative RRM RNA binding protein NSAP1 [Oryza sativa (japonica
cultivar-group)] gi|34393486|dbj|BAC83046.1| putative
RRM RNA binding protein NSAP1 [Oryza sativa (japonica
cultivar-group)]
Length = 613
Score = 210 bits (535), Expect = 1e-52
Identities = 143/458 (31%), Positives = 230/458 (49%), Gaps = 16/458 (3%)
Query: 60 EAGDEVEEEPEENVDEEEGDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLA 119
EAG E + E +++G G+E+ + + D + VA +E +E L
Sbjct: 162 EAGGEAPTD--EPASDQDGGVGNEQKLDES----KPATDCNAVAVVEESVCKEEEEVALV 215
Query: 120 DVKEEEQVEV-IKETQKQKELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKR 178
K E+ E + E +K+ +EVFVGGL ++A E D+R VF+K GEITEVRM +NP +
Sbjct: 216 VGKGVEEEEAGMSERRKRMTMEVFVGGLHRDAKEDDVRAVFAKAGEITEVRMIMNPLAGK 275
Query: 179 NKGFALLRFETVEHVKRALAELKNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALK 238
NKG+ +R+ K+A+AE N I GK C + +D ++L NI K WKKE +
Sbjct: 276 NKGYCFVRYRHAAQAKKAIAEFGNVKICGKLCRAAVPV--GNDRIFLGNINKKWKKEDVI 333
Query: 239 EKLKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDKPA 298
++LK G+E+ +TL D NN N G AFLE + D++ AYK+L + + FG
Sbjct: 334 KQLKKIGIENIDSVTLKSDSNNPVCNRGFAFLELETSRDARMAYKKLSQKN-AFGKGLNI 392
Query: 299 EVSFANSFIDLGDDIMAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARR 358
V++A D D+ QVK++F+D +P SWD ++ + KK+G +E V L+++MP A+R
Sbjct: 393 RVAWAEPLND-PDEKDMQVKSIFVDGIPTSWDHAQLKEIFKKHGKIESVVLSRDMPSAKR 451
Query: 359 KNYGFVTFGTHAAAVECAESITSAGLGEGNKKAKVRARLSRPLPKVRGKHVPHR-DISGR 417
+++ F+ + T AA+ C ES + K ++ L++P + + H+ I+G
Sbjct: 452 RDFAFINYITREAAISCLESFDKEEFSKNGSKVNIKVSLAKPAQQSKQTKEDHKSSITGE 511
Query: 418 KIGRLERPSRSRPAPRSRPAPQSRPAHVFRRLGSRIPPARPSSARNRRPVT-SIPVRARP 476
G++ + S+ R + S F LG P R S R T + +
Sbjct: 512 --GKM-KTSKIRYPVQDYTHIYSGEKRPFSTLGDPYYPLRGHSCRRHEGSTYTTAASSYG 568
Query: 477 ASPPARSYRRLAAAYPKSSMKRDYGRPVDLPPPRSRVS 514
A PPA + L + + G + P + +S
Sbjct: 569 ALPPATAESSLPHYHDSNRYPPHLGEAIKFSPTSAVLS 606
>gb|AAC27473.1| putative heterogeneous nuclear ribonucleoprotein [Arabidopsis
thaliana] gi|7485542|pir||T01598 hypothetical protein
At2g44710 [imported] - Arabidopsis thaliana
Length = 300
Score = 186 bits (473), Expect = 2e-45
Identities = 116/299 (38%), Positives = 172/299 (56%), Gaps = 30/299 (10%)
Query: 14 EVKESIDEYEKDEHLDFEDNYHEYDPEEYVGDDDYDERGIEQDEGQ---EAGDEVEEEPE 70
EV+ES+D++ KDE LD +DN EY+ EEY G ++++ER + Q++ + E G+E+EEE E
Sbjct: 12 EVEESVDDFGKDERLDLDDNEPEYEAEEY-GGEEFEERELGQEDHELVNEEGEELEEEIE 70
Query: 71 ENVDEEEGDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEEQVEVI 130
V+EE G+ DE + E +++ +DDD D+HA EE H DV+EEE +V+
Sbjct: 71 --VEEEAGEFADEIGDGAE----DLDSEDDD----DDHAIEEVKHGETVDVEEEEHHDVL 120
Query: 131 KETQKQKELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETV 190
E +K+KE E+FVG LDK A+E DL+KVF VGE+TEVR+ NPQTK++KG A LRF TV
Sbjct: 121 HERRKRKEFEIFVGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATV 180
Query: 191 EHVKRALAELKNP--VINGKQ-----------CGITITTCQDSDTLYLDNICKSWKKEAL 237
E KRA+ ELKN +I G+ I T+++D + SW +E +
Sbjct: 181 EQAKRAVKELKNTELLIVGESIISNLSILLIVISFMIFLVLQVKTIFIDGLLPSWNEERV 240
Query: 238 KEKLKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDK 296
++ LK YG + L + F+ F +H + K + +++ G DK
Sbjct: 241 RDLLKPYGK---LEKVELARNMPSARRKDFGFVTFDTHEAAVSCAKFINNSELGEGEDK 296
>emb|CAB89227.1| putative RNA binding protein [Arabidopsis thaliana]
gi|15231284|ref|NP_190834.1| RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
gi|51971921|dbj|BAD44625.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|51970792|dbj|BAD44088.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|11358672|pir||T49019 probable RNA binding protein -
Arabidopsis thaliana
Length = 471
Score = 130 bits (326), Expect = 2e-28
Identities = 97/335 (28%), Positives = 167/335 (48%), Gaps = 32/335 (9%)
Query: 60 EAGDEVEEEPEENVDEEEGDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLA 119
EA D +E E ++D GD EE+ E E YEEVE ++++ +E EE
Sbjct: 10 EAHDSMESEERVDLD---GDNDPEEILEEEVEYEEVE--EEEIEEIEEEIEEE------V 58
Query: 120 DVKEEEQVEVIKETQKQKEL--------------EVFVGGLDKEATEHDLRKVFSKVGEI 165
+V+EEE+ E T++++E EV++GG+ +ATE DL+ +GE+
Sbjct: 59 EVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKGFCGSIGEV 118
Query: 166 TEVRMTVNPQTKRNKGFALLRFETVEHVKRALAELKNPVINGKQCGITITTCQDSDTLYL 225
TEVR+ + KG+A + F + + A+ L N GK+ I +T Q L+L
Sbjct: 119 TEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKR--IKCSTTQAKHRLFL 176
Query: 226 DNICKSWKKEALKEKLKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRL 285
N+ ++W + +K+ G + + L ++ N G N G AF+E+ +H+ ++ Y +
Sbjct: 177 GNVPRNWMESDIKKAANRIG-PGVQIVELPKEPQNMGRNRGFAFIEYYNHACAE--YSKQ 233
Query: 286 QKTDVVFGVDKPA-EVSFANSFIDLGDDIMA-QVKTVFIDLLPPSWDEDYVRALLKKYGA 343
+ ++ F +D A VS+A S G D A QVK ++I LP ++ ++AL + +G
Sbjct: 234 KMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALFEHHGK 293
Query: 344 VEKVELAKNMPGARRKNYGFVTFGTHAAAVECAES 378
+ KV + PG YGFV + + + ++
Sbjct: 294 ILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKN 328
>gb|AAM47474.1| AT4g00830/A_TM018A10_14 [Arabidopsis thaliana]
gi|13605916|gb|AAK32943.1| AT4g00830/A_TM018A10_14
[Arabidopsis thaliana] gi|18411454|ref|NP_567192.1| RNA
recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 495
Score = 122 bits (307), Expect = 3e-26
Identities = 94/362 (25%), Positives = 189/362 (51%), Gaps = 19/362 (5%)
Query: 20 DEYEKDEHLDFED-NYHEYDPE-EYVGDDDYDERGIEQDEGQEAGDEVEEEPEENVDEEE 77
D + D+ +DFE+ +Y E + E E ++Y+E E D+ + G++ EE E E+
Sbjct: 3 DARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREV---EDY 59
Query: 78 GDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEEQVEVIKETQKQK 137
GDT ++E+V+ EE+ DDD+ D E A ++ D ++ E+ +
Sbjct: 60 GDTKGGDMEDVQ---EEIAEDDDNHI-DIETADDDEKPPSPIDDEDREKYSHLLSLPPHG 115
Query: 138 ELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRAL 197
EVF+GGL ++ E DLR + ++GEI EVR+ + + +KG+A + F+T + ++A+
Sbjct: 116 S-EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAI 174
Query: 198 AELKNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFKDLTLLED 257
EL + GK I + + + L++ NI K+W ++ ++ ++ G +++ L++D
Sbjct: 175 EELHSKEFKGKT--IRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKD 231
Query: 258 DNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDKPA-EVSFAN-SFIDLGDDIMA 315
N N G AF+ + ++++ Y R + D F ++ A V++A+ A
Sbjct: 232 PTNTTRNRGFAFVLY--YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAA 289
Query: 316 QVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVEC 375
QVK +++ +P + + ++ L +++G V K+ G ++++GFV + ++A++
Sbjct: 290 QVKALYVKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKA 347
Query: 376 AE 377
+
Sbjct: 348 VK 349
Score = 36.6 bits (83), Expect = 3.0
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 14/159 (8%)
Query: 237 LKEKLKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDK 296
++++++ VE +++ +DD+++ N E + D+K + ++ D
Sbjct: 21 MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGGDMEDVQEEIAEDDDN 80
Query: 297 PAEVSFAN------SFIDLGD--------DIMAQVKTVFIDLLPPSWDEDYVRALLKKYG 342
++ A+ S ID D + VFI LP E+ +R L ++ G
Sbjct: 81 HIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEEIG 140
Query: 343 AVEKVELAKNMPGARRKNYGFVTFGTHAAAVECAESITS 381
+ +V L K+ K Y FV F T A + E + S
Sbjct: 141 EIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 179
>gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa (japonica cultivar-group)]
Length = 465
Score = 121 bits (304), Expect = 7e-26
Identities = 104/364 (28%), Positives = 173/364 (46%), Gaps = 46/364 (12%)
Query: 32 DNYHEYDPEEYV---GDDDYDERGIEQD--------EGQEAGDEVEEEPEENVDEEEGDT 80
D +PEE V GDDD D ++D E + D+ EE+PE D GD
Sbjct: 3 DRQQSEEPEEQVDLEGDDDNDVMDDDEDGYRRRRRREDSDEPDDDEEDPEVEGDGH-GDA 61
Query: 81 GDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEEQVEVIKETQKQKELE 140
G E + ++ G D DD+ E+ + L + + E
Sbjct: 62 GTAAGEGGAHEMDKAAGGGGDGPEDDD---EKRKWDELLALPPQGS-------------E 105
Query: 141 VFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRALAEL 200
VF+GGL ++ TE DLR++ GEI EVR+ + +TK NKGFA + F E +RA+ EL
Sbjct: 106 VFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKEAAQRAIEEL 165
Query: 201 KNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYG-----VESFKDLTLL 255
+ G+ +++ Q L++ N+ K +E L++ ++ G +E FKDL
Sbjct: 166 HDKEHKGRTLRCSLS--QAKHRLFVGNVPKGLGEEELRKIIQGKGPGVVNIEMFKDL--- 220
Query: 256 EDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVD-KPAEVSFAN-SFIDLGDDI 313
++ N G F+E+ +H+ + A ++L + F VD VS+A
Sbjct: 221 ---HDPSRNRGFLFVEYYNHACADYARQKLSAPN--FKVDGSQLTVSWAEPKGSSDSSSA 275
Query: 314 MAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAV 373
AQVKT+++ LP + ++ ++ + +K+G V KV L G +R ++GFV F ++A+
Sbjct: 276 AAQVKTIYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHKR-DFGFVHFAERSSAL 334
Query: 374 ECAE 377
+ +
Sbjct: 335 KAVK 338
>gb|AAP52145.1| putative RNA-binding protein [Oryza sativa (japonica
cultivar-group)] gi|37531112|ref|NP_919858.1| putative
RNA-binding protein [Oryza sativa (japonica
cultivar-group)] gi|18425248|gb|AAL69426.1| Putative
RNA-binding protein [Oryza sativa]
Length = 472
Score = 120 bits (300), Expect = 2e-25
Identities = 104/368 (28%), Positives = 177/368 (47%), Gaps = 47/368 (12%)
Query: 32 DNYHEYDPEEYV---GDDDY--DERGIEQDEGQEAGDEVEEEPEENVDEEEGDTGDEEVE 86
D +PEE V GDDD D+ G + +++ D EE+P+E E +G
Sbjct: 3 DRQQSEEPEEQVDLEGDDDIMDDDDGYRRHRREDSDDPEEEDPDERQGEGDGRR------ 56
Query: 87 EVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEEQVEVIKETQKQKEL------- 139
E+ EG AG D A E + + V + E +E +K EL
Sbjct: 57 ------EDAEGPGG--AGGDPAAGGEGGADVMDKVGGDAGPEDEEEKRKWDELLALPPQG 108
Query: 140 -EVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRALA 198
EVF+GGL ++ TE DL ++ GEI+EVR+ + +TK NKGFA + F + +RA+
Sbjct: 109 SEVFIGGLPRDTTEDDLHELCEAFGEISEVRLMKDKETKENKGFAFVTFTGKDGAQRAIE 168
Query: 199 ELKNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYG-----VESFKDLT 253
+L + G+ +++ Q L++ N+ K ++ L+ ++ G +E FKDL
Sbjct: 169 DLHDKEHKGRTLRCSLS--QAKHRLFVGNVPKGLSEDELRNIIQGKGPGVVNIEMFKDL- 225
Query: 254 LLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVD-KPAEVSFA---NSFIDL 309
++ N G F+E+ +H+ + A ++L + F VD VS+A S
Sbjct: 226 -----HDPSRNRGFLFVEYYNHACADYAKQKLSAPN--FKVDGSQLTVSWAEPKGSSSSD 278
Query: 310 GDDIMAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTH 369
AQVKT+++ LP + ++ ++ + + +G V KV L G +R ++GFV F
Sbjct: 279 SSSAAAQVKTIYVKNLPENASKEKIKEIFEIHGEVTKVVLPPAKAGNKR-DFGFVHFAER 337
Query: 370 AAAVECAE 377
++A++ +
Sbjct: 338 SSALKAVK 345
>gb|AAO72701.1| putative RNA-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 476
Score = 119 bits (299), Expect = 3e-25
Identities = 100/363 (27%), Positives = 174/363 (47%), Gaps = 36/363 (9%)
Query: 18 SIDEYEKDEHLDFEDNYHEYDPEEYVGDDDYDERGIEQDEGQEAGDEVEEEPEENVDEEE 77
S++ + +E L+F+D D EE V +E IE +E +E +E E E +E+V EE
Sbjct: 25 SVEPEKSEECLEFDD-----DEEEEV-----EEEEIEYEEIEEEIEEEEVEEDEDVVEEV 74
Query: 78 GDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEEQVEVIKETQKQK 137
+ +EE EE E +E EG + +E+ H L +
Sbjct: 75 EEVDEEEDEEEEEESDETEGVSKTKGVHQKDVTEKGKHAELLALPPHGS----------- 123
Query: 138 ELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRAL 197
EV+VGG+ + + DL+++ VGE+ EVRM R G+A + F T +A+
Sbjct: 124 --EVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSR--GYAFVNFRTKGLALKAV 179
Query: 198 AELKNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFK-DLTLLE 256
EL N + GK+ I +++ Q + L++ N+ SW + ++ ++ G K DL +
Sbjct: 180 KELNNAKLKGKR--IRVSSSQAKNKLFIGNVPHSWTDDDFRKVVEEVGPGVLKADLMKVS 237
Query: 257 DDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDKPA-EVSFANSFIDLGDDIMA 315
N N G F+E+ +H+ ++ Y R + + F +D A VS+A+ + +
Sbjct: 238 SANR---NRGYGFVEYYNHACAE--YARQEMSSPTFKLDSNAPTVSWADP-KNNDSASTS 291
Query: 316 QVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVEC 375
QVK+V++ LP + + ++ L + +G +EKV L + G YGFV F + A+
Sbjct: 292 QVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSR-GGHDNRYGFVHFKDRSMAMRA 350
Query: 376 AES 378
++
Sbjct: 351 LQN 353
Score = 48.5 bits (114), Expect = 8e-04
Identities = 77/323 (23%), Positives = 125/323 (37%), Gaps = 81/323 (25%)
Query: 61 AGDEVEEEPEENVDEEEGDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLAD 120
+ + VE E E E + D +EEVEE E YEE+E E EE V E
Sbjct: 22 SANSVEPEKSEECLEFDDDE-EEEVEEEEIEYEEIE----------EEIEEEEVEE---- 66
Query: 121 VKEEEQVEVIKETQKQKELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNK 180
+E+ VE ++E ++++ ++E E D + SK + + +T
Sbjct: 67 --DEDVVEEVEEVDEEED--------EEEEEESDETEGVSKTKGVHQKDVT--------- 107
Query: 181 GFALLRFETVEHVKRALAELKNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALKEK 240
E +H AEL +G + +Y+ I E LK
Sbjct: 108 -------EKGKH-----AELLALPPHGSE-------------VYVGGISSDVSSEDLKRL 142
Query: 241 LKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDKPAEV 300
+ G + +DD+ G AF+ F + + A K L + K +
Sbjct: 143 CEPVGEVVEVRMMRGKDDSR-----GYAFVNFRTKGLALKAVKELNNAKL-----KGKRI 192
Query: 301 SFANSFIDLGDDIMAQVKT-VFIDLLPPSWDEDYVRALLKKYG-AVEKVELAKNMPGARR 358
++S Q K +FI +P SW +D R ++++ G V K +L K R
Sbjct: 193 RVSSS----------QAKNKLFIGNVPHSWTDDDFRKVVEEVGPGVLKADLMKVSSANRN 242
Query: 359 KNYGFVTFGTHAAAVECAESITS 381
+ YGFV + HA A + ++S
Sbjct: 243 RGYGFVEYYNHACAEYARQEMSS 265
>emb|CAB80892.1| putative protein [Arabidopsis thaliana] gi|2252863|gb|AAB62861.1|
similar to nucleolin protein [Arabidopsis thaliana]
gi|7485284|pir||T01563 hypothetical protein
A_TM018A10.14 - Arabidopsis thaliana
Length = 521
Score = 109 bits (273), Expect = 3e-22
Identities = 95/386 (24%), Positives = 192/386 (49%), Gaps = 41/386 (10%)
Query: 20 DEYEKDEHLDFED-NYHEYDPE-EYVGDDDYDERGIEQDEGQEAGDEVEEEPEENVDEEE 77
D + D+ +DFE+ +Y E + E E ++Y+E E D+ + G++ EE E E+
Sbjct: 3 DARDNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREV---EDY 59
Query: 78 GDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEEQVEVIKETQKQK 137
GDT ++E+V+ EE+ DDD+ D E A ++ D ++ E+ +
Sbjct: 60 GDTKGGDMEDVQ---EEIAEDDDNHI-DIETADDDEKPPSPIDDEDREKYSHLLSLPPHG 115
Query: 138 ELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTV--------------NPQTKRNKGFA 183
EVF+GGL ++ E DLR + ++GEI EVR + + + +KG+A
Sbjct: 116 S-EVFIGGLPRDVGEEDLRDLCEEIGEIFEVRTAIIFVFHDILFVRLMKDRDSGDSKGYA 174
Query: 184 LLRFETVEHVKRALAELKNPVINGK---QCGITIT----TCQDSDT---LYLDNICKSWK 233
+ F+T + ++A+ EL + C ++++ C S+T L++ NI K+W
Sbjct: 175 FVAFKTKDVAQKAIEELHSKEFKASSTANCSLSLSGKTIRCSLSETKNRLFIGNIPKNWT 234
Query: 234 KEALKEKLKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFG 293
++ ++ ++ G +++ L++D N N G AF+ + ++++ Y R + D F
Sbjct: 235 EDEFRKVIEDVG-PGVENIELIKDPTNTTRNRGFAFVLY--YNNACADYSRQKMIDSNFK 291
Query: 294 VDKPA-EVSFAN-SFIDLGDDIMAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAK 351
++ A V++A+ AQVK +++ +P + + ++ L +++G V K+
Sbjct: 292 LEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTKIVTPP 351
Query: 352 NMPGARRKNYGFVTFGTHAAAVECAE 377
G ++++GFV + ++A++ +
Sbjct: 352 GKGG--KRDFGFVHYAERSSALKAVK 375
>gb|AAP52302.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37531426|ref|NP_920015.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|22655766|gb|AAN04183.1| Hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 728
Score = 102 bits (254), Expect = 4e-20
Identities = 154/645 (23%), Positives = 252/645 (38%), Gaps = 111/645 (17%)
Query: 17 ESIDEYEKDEHLDFEDNYHEYDPEEYVGDDDYDERGIEQDEGQEAGDEVEEEPE-----E 71
E ++E KD E +PEE D++ +E +E+DE E + EEEPE E
Sbjct: 115 EPVEEEPKDV---METGEEAIEPEE---DEEPEEAEVEEDEEPEELEMEEEEPEDADSEE 168
Query: 72 NVDEEEGDTGDEEVEEVEYVYEEVEGDDDDVAGDDEH------------ASEENVHEHLA 119
+++EE G EE + + E + D ++ +D+H +++E+V
Sbjct: 169 SMEEEAGSEVSEEEAAADDMKEIADKDSEEAQDEDKHGDNHKGEVADQLSNDEDVGGREN 228
Query: 120 DVKEEEQVE----VIKETQ--KQKELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVN 173
D ++++ V+ K LE+FVGGL K+ E D+R VFS+ GE+ +R+
Sbjct: 229 DESPNDELDTSLLVLDSVPDGNDKTLELFVGGLPKDCVEEDIRVVFSQCGEVESIRI--- 285
Query: 174 PQTKRNKGFALLRFETVEHVKRALAELKNPV-INGKQCGITIT----------TCQDSDT 222
K+ K A +R+ + K+AL E K+ + +NGK +++ T
Sbjct: 286 --VKKRKRIAFVRYADISATKKALTEFKDGIKVNGKSVRVSVAEPHRKSSEQKALTKVKT 343
Query: 223 LYLDNICKSWKKEALKEKLKHYGVESFKDLTLLEDDNNEGTNCGCAFLEFSSHSDSKDAY 282
+YL++ +SW + ++E + YG + + + +L +F+EFSS +
Sbjct: 344 VYLEHFPRSWDERNIEECCEGYG--NIQKVNILRSKKKV-----VSFVEFSSRKSALACV 396
Query: 283 KRLQKTDV-------VFGVDKP-AEVSFANSFIDLGDDIMAQVKTVFID---LLPPSWDE 331
+ + K + + +P ++V AN G ++ + + D + DE
Sbjct: 397 EGISKAKINDREVKLAASLARPQSKVQLANESSKGGFNVHSGATSKSPDKSKMKKDQTDE 456
Query: 332 DYVR----ALLK----KYGAVEKVELAKNMPGA-------RRKNYGFVTFGTHAAAVECA 376
V+ LLK K + + VE+ + + +R+N + +
Sbjct: 457 TIVKKSQLKLLKGDESKLPSKDDVEVPQTSTHSKGKAKVGKRQNTSIDERPSKKSRESGE 516
Query: 377 ESITSAGLGEGNKKAKVRARLSRPLPKVRGKHVPHRDISGRKIGRLERPSRSRPAPRSRP 436
+TS GE K+K ++ RPL K D+ LE P S + R R
Sbjct: 517 SKLTSQDEGEVG-KSKSKSVNERPLKKASKN---RDDVKLPSQSGLEEPQTSNRSKRKRK 572
Query: 437 APQSRPAHVFRRLGSRIPPARPSSARN-RRPVTSIPVRARPASPPARSYRRLAAAYPKSS 495
++R V R P + RN + P S V + A P + R + P S
Sbjct: 573 VRKNRSTTVNER-----PVEKAWKNRNIKHPAGSRYVTSNQAYPTVGATSR---SKPHS- 623
Query: 496 MKRDYGRPVDLPPPRSRVSADYGSQVVSQRGPSYRDYPARDSGYPDLHRDTSRTAPRRGY 555
D PP SRV QR Y S Y R APR Y
Sbjct: 624 --HDLAPHAGFIPPSSRVQRTPARD--HQRTAPYNIRQISGSPYA-----RERVAPRPAY 674
Query: 556 ---------LDDGYD-RRLERPPSPSPRLSYREGRPRDYDALSGS 590
+ GY L PP P P +SY P GS
Sbjct: 675 SVHTSNAAGYEAGYAYTYLPPPPPPPPSISYHPPPPASISYHPGS 719
>gb|AAH50079.1| Syncrip protein [Mus musculus]
Length = 604
Score = 98.2 bits (243), Expect = 8e-19
Identities = 70/247 (28%), Positives = 124/247 (49%), Gaps = 15/247 (6%)
Query: 140 EVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRALAE 199
E+FVG + ++ E +L +F K G I ++R+T++P T N+G+A + F T E + A+
Sbjct: 205 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLTMDPLTGLNRGYAFVTFCTKEAAQEAVKL 264
Query: 200 LKNPVI-NGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFKDLTLLEDD 258
N I +GK G+ I+ ++ L++ +I KS KE + E+ E D+ L
Sbjct: 265 YNNHEIRSGKHIGVCISVA--NNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQP 321
Query: 259 NNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDV-VFGVDKPAEVSFANSFIDLGDDIMAQV 317
+++ N G FLE+ H + A +RL V V+G V +A+ D ++MA+V
Sbjct: 322 DDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKV 379
Query: 318 KTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVECAE 377
K +F+ L + E+ + ++G +E+V+ + K+Y F+ F AV+ E
Sbjct: 380 KVLFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 431
Query: 378 SITSAGL 384
+ L
Sbjct: 432 EMNGKDL 438
>gb|AAD38198.1| NSAP1 protein [Homo sapiens]
Length = 562
Score = 96.7 bits (239), Expect = 2e-18
Identities = 69/247 (27%), Positives = 123/247 (48%), Gaps = 15/247 (6%)
Query: 140 EVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRALAE 199
E+FVG + ++ E +L +F K G I ++R+ ++P T N+G+A + F T E + A+
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
Query: 200 LKNPVI-NGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFKDLTLLEDD 258
N I +GK G+ I+ ++ L++ +I KS KE + E+ E D+ L
Sbjct: 223 YNNHEIRSGKHIGVCISVA--NNRLFVGSIPKSKTKEQILEEFSQV-TEGLTDVILYHQP 279
Query: 259 NNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDV-VFGVDKPAEVSFANSFIDLGDDIMAQV 317
+++ N G FLE+ H + A +RL V V+G V +A+ D ++MA+V
Sbjct: 280 DDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKV 337
Query: 318 KTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVECAE 377
K +F+ L + E+ + ++G +E+V+ + K+Y F+ F AV+ E
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 389
Query: 378 SITSAGL 384
+ L
Sbjct: 390 EMNGKDL 396
>ref|XP_532223.1| PREDICTED: similar to NS1-associated protein 1 [Canis familiaris]
gi|56204903|emb|CAI20447.1| RP1-3J17.2 [Homo sapiens]
gi|62897111|dbj|BAD96496.1| synaptotagmin binding,
cytoplasmic RNA interacting protein variant [Homo
sapiens]
Length = 623
Score = 96.3 bits (238), Expect = 3e-18
Identities = 69/247 (27%), Positives = 123/247 (48%), Gaps = 15/247 (6%)
Query: 140 EVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRALAE 199
E+FVG + ++ E +L +F K G I ++R+ ++P T N+G+A + F T E + A+
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
Query: 200 LKNPVI-NGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFKDLTLLEDD 258
N I +GK G+ I+ ++ L++ +I KS KE + E+ E D+ L
Sbjct: 223 YNNHEIRSGKHIGVCISVA--NNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQP 279
Query: 259 NNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDV-VFGVDKPAEVSFANSFIDLGDDIMAQV 317
+++ N G FLE+ H + A +RL V V+G V +A+ D ++MA+V
Sbjct: 280 DDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKV 337
Query: 318 KTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVECAE 377
K +F+ L + E+ + ++G +E+V+ + K+Y F+ F AV+ E
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 389
Query: 378 SITSAGL 384
+ L
Sbjct: 390 EMNGKDL 396
>gb|AAH40844.1| SYNCRIP protein [Homo sapiens]
Length = 410
Score = 96.3 bits (238), Expect = 3e-18
Identities = 68/248 (27%), Positives = 124/248 (49%), Gaps = 15/248 (6%)
Query: 139 LEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRALA 198
+++FVG + ++ E +L +F K G I ++R+ ++P T N+G+A + F T E + A+
Sbjct: 10 IQIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 69
Query: 199 ELKNPVI-NGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFKDLTLLED 257
N I +GK G+ I+ ++ L++ +I KS KE + E+ E D+ L
Sbjct: 70 LYNNHEIRSGKHIGVCISVA--NNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQ 126
Query: 258 DNNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDV-VFGVDKPAEVSFANSFIDLGDDIMAQ 316
+++ N G FLE+ H + A +RL V V+G V +A+ D ++MA+
Sbjct: 127 PDDKKKNRGSCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAK 184
Query: 317 VKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVECA 376
VK +F+ L + E+ + ++G +E+V+ + K+Y F+ F AV+
Sbjct: 185 VKVLFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAM 236
Query: 377 ESITSAGL 384
E + L
Sbjct: 237 EEMNGKDL 244
>gb|AAH15575.1| SYNCRIP protein [Homo sapiens]
Length = 417
Score = 96.3 bits (238), Expect = 3e-18
Identities = 69/247 (27%), Positives = 123/247 (48%), Gaps = 15/247 (6%)
Query: 140 EVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRALAE 199
E+FVG + ++ E +L +F K G I ++R+ ++P T N+G+A + F T E + A+
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
Query: 200 LKNPVI-NGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFKDLTLLEDD 258
N I +GK G+ I+ ++ L++ +I KS KE + E+ E D+ L
Sbjct: 223 YNNHEIRSGKHIGVCISVA--NNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQP 279
Query: 259 NNEGTNCGCAFLEFSSHSDSKDAYKRLQKTDV-VFGVDKPAEVSFANSFIDLGDDIMAQV 317
+++ N G FLE+ H + A +RL V V+G V +A+ D ++MA+V
Sbjct: 280 DDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKV 337
Query: 318 KTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVECAE 377
K +F+ L + E+ + ++G +E+V+ + K+Y F+ F AV+ E
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 389
Query: 378 SITSAGL 384
+ L
Sbjct: 390 EMNGKDL 396
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,370,929,363
Number of Sequences: 2540612
Number of extensions: 69334175
Number of successful extensions: 564619
Number of sequences better than 10.0: 13331
Number of HSP's better than 10.0 without gapping: 5438
Number of HSP's successfully gapped in prelim test: 8548
Number of HSP's that attempted gapping in prelim test: 357966
Number of HSP's gapped (non-prelim): 77788
length of query: 726
length of database: 863,360,394
effective HSP length: 136
effective length of query: 590
effective length of database: 517,837,162
effective search space: 305523925580
effective search space used: 305523925580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 79 (35.0 bits)
Medicago: description of AC149129.7