BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148996.16 - phase: 0 /pseudo
(332 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM65204.1| unknown [Arabidopsis thaliana] gi|26450050|dbj|BA... 159 1e-37
pir||T02314 hypothetical protein At2g34260 [imported] - Arabidop... 159 1e-37
ref|NP_973596.1| transducin family protein / WD-40 repeat family... 141 2e-32
ref|NP_910903.1| putative transducin / WD-40 repeat protein [Ory... 137 4e-31
ref|NP_001014873.1| hypothetical protein LOC508709 [Bos taurus] ... 110 4e-23
gb|AAF54692.2| CG14722-PA [Drosophila melanogaster] gi|17862296|... 87 9e-16
gb|EAL28825.1| GA13204-PA [Drosophila pseudoobscura] 86 2e-15
gb|AAW40894.1| protein monoubiquitination-related protein, putat... 83 1e-14
gb|EAL23242.1| hypothetical protein CNBA3580 [Cryptococcus neofo... 83 1e-14
emb|CAF87493.1| unnamed protein product [Tetraodon nigroviridis] 82 2e-14
ref|XP_535212.1| PREDICTED: similar to hypothetical protein FLJ2... 79 2e-13
gb|AAT68118.1| AK025355-like [Danio rerio] gi|51467990|ref|NP_00... 78 4e-13
gb|AAH95552.1| Flj20195l protein [Danio rerio] 78 4e-13
ref|XP_640134.1| hypothetical protein DDB0204846 [Dictyostelium ... 77 5e-13
dbj|BAB15118.1| unnamed protein product [Homo sapiens] gi|462497... 74 6e-12
ref|XP_623745.1| PREDICTED: similar to CG14722-PA [Apis mellifera] 74 6e-12
gb|AAS66224.1| LRRG00133 [Rattus norvegicus] 74 8e-12
ref|NP_001017932.1| WD repeat domain 55 [Rattus norvegicus] 74 8e-12
emb|CAH91474.1| hypothetical protein [Pongo pygmaeus] 73 1e-11
ref|NP_080740.2| WD repeat domain 55 [Mus musculus] gi|26344866|... 72 2e-11
>gb|AAM65204.1| unknown [Arabidopsis thaliana] gi|26450050|dbj|BAC42145.1| unknown
protein [Arabidopsis thaliana]
gi|28973067|gb|AAO63858.1| putative G-protein
beta-subunit (transducin) [Arabidopsis thaliana]
gi|20197166|gb|AAC27402.2| expressed protein
[Arabidopsis thaliana] gi|18403495|ref|NP_565782.1|
transducin family protein / WD-40 repeat family protein
[Arabidopsis thaliana]
Length = 353
Score = 159 bits (401), Expect = 1e-37
Identities = 81/121 (66%), Positives = 95/121 (77%), Gaps = 3/121 (2%)
Query: 1 MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60
MEI+LG AF IDFHPS NLVA+GLIDG LHLYRY SD S VR +V AH ESCRA
Sbjct: 1 MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSD---SSLVRERKVRAHKESCRAV 57
Query: 61 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120
RFI+ G+ ++T S D SILATDVETG+ +A L+NAHE AVN LIN+TE+T+ASGDD GC+
Sbjct: 58 RFIDDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCV 117
Query: 121 K 121
K
Sbjct: 118 K 118
Score = 141 bits (356), Expect = 2e-32
Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Query: 211 RIITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLD 270
R+ITG +NG+I+LVGILPNRII+PI H +YP+E LA SHD+KFLGS HD MLKLW+L+
Sbjct: 234 RLITGCDNGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKLWNLE 292
Query: 271 NILQGSRSTQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNGHAVGDSNNFF 330
IL+GS N +G A D DSD+ D MD+DN SK SKG+KRK S + + +NNFF
Sbjct: 293 EILEGSNVNSGNASG-AAEDSDSDN-DGMDLDNDPSKSSKGSKRKTKSKANTLNATNNFF 350
Query: 331 AD 332
AD
Sbjct: 351 AD 352
>pir||T02314 hypothetical protein At2g34260 [imported] - Arabidopsis thaliana
Length = 236
Score = 159 bits (401), Expect = 1e-37
Identities = 81/121 (66%), Positives = 95/121 (77%), Gaps = 3/121 (2%)
Query: 1 MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60
MEI+LG AF IDFHPS NLVA+GLIDG LHLYRY SD S VR +V AH ESCRA
Sbjct: 1 MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSD---SSLVRERKVRAHKESCRAV 57
Query: 61 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120
RFI+ G+ ++T S D SILATDVETG+ +A L+NAHE AVN LIN+TE+T+ASGDD GC+
Sbjct: 58 RFIDDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCV 117
Query: 121 K 121
K
Sbjct: 118 K 118
Score = 70.9 bits (172), Expect = 5e-11
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 261 DQMLKLWDLDNILQGSRSTQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNG 320
D +LKLW+L+ IL+GS N +G A D DSD+ D MD+DN SK SKG+KRK S
Sbjct: 166 DALLKLWNLEEILEGSNVNSGNASGA-AEDSDSDN-DGMDLDNDPSKSSKGSKRKTKSKA 223
Query: 321 HAVGDSNNFFAD 332
+ + +NNFFAD
Sbjct: 224 NTLNATNNFFAD 235
>ref|NP_973596.1| transducin family protein / WD-40 repeat family protein
[Arabidopsis thaliana]
Length = 296
Score = 141 bits (356), Expect = 2e-32
Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Query: 211 RIITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLD 270
R+ITG +NG+I+LVGILPNRII+PI H +YP+E LA SHD+KFLGS HD MLKLW+L+
Sbjct: 177 RLITGCDNGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKLWNLE 235
Query: 271 NILQGSRSTQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNGHAVGDSNNFF 330
IL+GS N +G A D DSD+ D MD+DN SK SKG+KRK S + + +NNFF
Sbjct: 236 EILEGSNVNSGNASG-AAEDSDSDN-DGMDLDNDPSKSSKGSKRKTKSKANTLNATNNFF 293
Query: 331 AD 332
AD
Sbjct: 294 AD 295
Score = 78.6 bits (192), Expect = 2e-13
Identities = 36/53 (67%), Positives = 45/53 (83%)
Query: 69 VLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
++T S D SILATDVETG+ +A L+NAHE AVN LIN+TE+T+ASGDD GC+K
Sbjct: 9 IVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVK 61
>ref|NP_910903.1| putative transducin / WD-40 repeat protein [Oryza sativa (japonica
cultivar-group)] gi|22831203|dbj|BAC16061.1| putative
transducin / WD-40 repeat protein [Oryza sativa
(japonica cultivar-group)]
Length = 353
Score = 137 bits (345), Expect = 4e-31
Identities = 68/121 (56%), Positives = 89/121 (73%), Gaps = 3/121 (2%)
Query: 1 MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60
ME ++ FD+ FHPS LVA+ LI G+L+L+RY+++ S P R+ +H ESCRA
Sbjct: 1 MEALHEEMPFDLAFHPSSPLVATSLITGELYLFRYAAE---SQPERLFAAKSHKESCRAV 57
Query: 61 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120
RF+ G +LTGS D SILA+DVETG IARL++AHE +NRL+ LTE+TVASGDD+GCI
Sbjct: 58 RFVESGNVILTGSADCSILASDVETGKPIARLEDAHENGINRLVCLTETTVASGDDEGCI 117
Query: 121 K 121
K
Sbjct: 118 K 118
Score = 123 bits (308), Expect = 9e-27
Identities = 59/121 (48%), Positives = 86/121 (70%), Gaps = 2/121 (1%)
Query: 212 IITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDN 271
+I+G+ +G+I LVGILPNRII+P+AEHSEYP+E LAFS+DR +LGSI HD+MLKLWDL +
Sbjct: 234 LISGASDGVIRLVGILPNRIIQPLAEHSEYPIEALAFSNDRNYLGSISHDKMLKLWDLQD 293
Query: 272 ILQGSRSTQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNGHAVGDSNNFFA 331
+L + Q ++ G +D DDG ++D+D ++SK S+ K + +++FFA
Sbjct: 294 LLNRQQLVQDDKLGEQDSDDSDDDGMDVDMDPNSSKGSRSTKTSKGQSSDR--PTSDFFA 351
Query: 332 D 332
D
Sbjct: 352 D 352
>ref|NP_001014873.1| hypothetical protein LOC508709 [Bos taurus]
gi|61553137|gb|AAX46356.1| hypothetical protein FLJ20195
[Bos taurus]
Length = 382
Score = 110 bits (276), Expect = 4e-23
Identities = 90/302 (29%), Positives = 139/302 (45%), Gaps = 45/302 (14%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L A + FHP+ +L+A+G +DGD+ ++ YS + + H +SCRA
Sbjct: 34 DIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQE--GETKELWSSGHHLKSCRAVV 91
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F G+ ++T S D +I DVE G R+ AH A +N L+ + E+ +A+GDD G I+
Sbjct: 92 FSEDGQKLVTVSKDKAIHFLDVELGRLERRISKAHGAPINSLLLVDENVLATGDDTGGIR 151
Query: 122 TL-------LLHLTQ*KYW-----PQVETGLFLFAIFD-------------EIKSKPNLN 156
L+ + Q + + + L L A D E+ S+P
Sbjct: 152 LWDQRKEGPLMDMRQHEEYIADMALDPDKKLLLTASGDGCLGVFNIKRRRFELLSEPQSG 211
Query: 157 FLKMSCCLWF**RMAGKLFADHKLESCYCIHGD---------ASRIAVIDSLILLQTLLI 207
L + + K+ + Y + D A R ID ++ + L+
Sbjct: 212 DLTSVTLM----KYGRKVACGSSEGTIYLFNWDGFGATSDRFALRAESIDCMVPVTESLL 267
Query: 208 PC*RIITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLW 267
GS +G+I V ILPNR++ + +H+E PVE LA SH FL S GHDQ LK W
Sbjct: 268 -----CAGSTDGVIRAVNILPNRVVGSVGQHAEEPVENLALSHCGCFLASSGHDQRLKFW 322
Query: 268 DL 269
D+
Sbjct: 323 DM 324
>gb|AAF54692.2| CG14722-PA [Drosophila melanogaster] gi|17862296|gb|AAL39625.1|
LD21659p [Drosophila melanogaster]
gi|28571655|ref|NP_650111.3| CG14722-PA [Drosophila
melanogaster]
Length = 498
Score = 86.7 bits (213), Expect = 9e-16
Identities = 49/120 (40%), Positives = 68/120 (55%), Gaps = 4/120 (3%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
EI L DI FHP +++A I GD+HLY Y DN + +R +EVH+ ++CR
Sbjct: 152 EIKLEDFITDICFHPDRDIIALATIIGDVHLYEY--DNEANKLLRTIEVHS--KACRDVE 207
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F GR +LT S D ++ TD+ET + AH+ A+N L L E+ ASGDD G +K
Sbjct: 208 FTEDGRFLLTCSKDKCVMVTDMETEKLKKLYETAHDDAINTLHVLNENLFASGDDAGTVK 267
>gb|EAL28825.1| GA13204-PA [Drosophila pseudoobscura]
Length = 504
Score = 85.5 bits (210), Expect = 2e-15
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
EI L D+ FHP +++A I GD+HLY Y N + +R +EVH+ ++CR
Sbjct: 156 EIKLEDFITDVCFHPDRDIIALATIIGDVHLYEYG--NEGNKLLRTIEVHS--KACRDVE 211
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F GR +LT S D ++ TD+ET + AH+ A+N+L L E+ A+GDD G +K
Sbjct: 212 FTEDGRYLLTASKDKCVMVTDLETEKLKKLYETAHDDAINKLHVLDENLFATGDDAGTVK 271
>gb|AAW40894.1| protein monoubiquitination-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
gi|58258601|ref|XP_566713.1| protein
monoubiquitination-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 374
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 29/145 (20%)
Query: 194 AVIDSLILLQTLLIPC*RIITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRK 253
A ID+++ L +I TGSE+GMI ++ +LP++ + +A H E+PVER+ + K
Sbjct: 252 ASIDAIVALTPDIIA-----TGSEDGMIRVIQVLPHKFLGVVATHEEFPVERIRLDRNNK 306
Query: 254 FLGSIGHDQMLKLWDLDNILQGSRSTQRNETGVVANDGDSDDGDEMDVD------NSASK 307
+LGS+ HD+ LKL D++++ + DSD+ DEM+ D + K
Sbjct: 307 WLGSVSHDECLKLTDVEDLFE-----------------DSDEDDEMEEDEPDSDEEKSKK 349
Query: 308 FSKGNKRKNASNGHAVGDSNNFFAD 332
K N K+ S G A D +FFAD
Sbjct: 350 KKKDNGMKDMSRGQAEND-GSFFAD 373
Score = 56.6 bits (135), Expect = 1e-06
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 10 FDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAARFINGGRAV 69
FD+ FHP E +V S L+ G + + Y D+ + V + RA G +
Sbjct: 28 FDVAFHPKEPVVFSSLLTGQVCAWSY--DDATGETSSSWSVRPSKRTARALSIEENGDEI 85
Query: 70 LTGSPDFSILAT---------DVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120
G S+L GS D+AHE +NR+ + + VA+GDDDG I
Sbjct: 86 WMGGKSGSLLCALTPPKVIQLSTRDGSMTRERDSAHECPINRVYCVNRNLVATGDDDGVI 145
Query: 121 K 121
K
Sbjct: 146 K 146
>gb|EAL23242.1| hypothetical protein CNBA3580 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 384
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 29/145 (20%)
Query: 194 AVIDSLILLQTLLIPC*RIITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRK 253
A ID+++ L +I TGSE+GMI ++ +LP++ + +A H E+PVER+ + K
Sbjct: 262 ASIDAIVALTPDIIA-----TGSEDGMIRVIQVLPHKFLGVVATHEEFPVERIRLDRNNK 316
Query: 254 FLGSIGHDQMLKLWDLDNILQGSRSTQRNETGVVANDGDSDDGDEMDVD------NSASK 307
+LGS+ HD+ LKL D++++ + DSD+ DEM+ D + K
Sbjct: 317 WLGSVSHDECLKLTDVEDLFE-----------------DSDEDDEMEEDEPDSDEEKSKK 359
Query: 308 FSKGNKRKNASNGHAVGDSNNFFAD 332
K N K+ S G A D +FFAD
Sbjct: 360 KKKDNGMKDMSRGQAEND-GSFFAD 383
Score = 52.8 bits (125), Expect = 1e-05
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 21/131 (16%)
Query: 10 FDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAARFINGGRAV 69
FD+ FHP E +V S L+ G + + Y D+ + V + RA G +
Sbjct: 28 FDVAFHPKEPVVFSSLLTGQVCAWSY--DDATGETSSSWSVRPSKRTARALSIEENGDEI 85
Query: 70 LTGSPDFSILAT-------------------DVETGSTIARLDNAHEAAVNRLINLTEST 110
G S+L GS D+AHE +NR+ + +
Sbjct: 86 WMGGKSGSLLCALTPPKVMCPILLMSNCSQLSTRDGSMTRERDSAHECPINRVYCVNRNL 145
Query: 111 VASGDDDGCIK 121
VA+GDDDG IK
Sbjct: 146 VATGDDDGVIK 156
>emb|CAF87493.1| unnamed protein product [Tetraodon nigroviridis]
Length = 615
Score = 82.4 bits (202), Expect = 2e-14
Identities = 43/120 (35%), Positives = 71/120 (58%), Gaps = 2/120 (1%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L +A + HPS +++A G +DGD+++Y YS T D + H +SCR R
Sbjct: 19 DIRLEAIANSVALHPSRDILALGDVDGDVYVYSYSC--TEGDNRELWSSGHHVKSCRQVR 76
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F G+ + + S D ++ DVE G ++R+ AH+AA+N L+ + E+ +A+GDD G +K
Sbjct: 77 FSADGQKLYSVSRDKAVHLLDVERGQLLSRIRGAHDAAINSLLLVDENVLATGDDVGGLK 136
>ref|XP_535212.1| PREDICTED: similar to hypothetical protein FLJ20195 [Canis
familiaris]
Length = 953
Score = 79.0 bits (193), Expect = 2e-13
Identities = 72/313 (23%), Positives = 130/313 (41%), Gaps = 61/313 (19%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L A + FHP+ +L+A+G +DGD+ ++ YS + + H +SCRA
Sbjct: 604 DIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQE--GETKELWSSGHHLKSCRAVV 661
Query: 62 FINGGRAVLT-------------------------GSP-------DFSILATDVETGST- 88
F G+ ++T G+P D ++L T +TG
Sbjct: 662 FSEDGQKLVTVSKDKAIHVLDVEQGRLERRISKAHGAPINSLLLVDENVLVTGDDTGGVR 721
Query: 89 ---------IARLDNAHEAAVNRLINLTESTVASGDDDGCIKTLLLHLTQ*KYWPQVETG 139
+ + E + ++ ++ + + DGC+ + + + + ++G
Sbjct: 722 LWDQRKEGPLMDMRQHEEYIADMALDPSKKLLLTASGDGCLGVFNIRRRRFELLSEPQSG 781
Query: 140 LFLFAIFDEIKSKPNLNFLKMSCCLWF**RMAGKLFADHKLESCYCIHGDASRIAVIDSL 199
++ S + + K C G ++ + A R ID +
Sbjct: 782 --------DLTSVTLMKYGKKVACG----SSEGTIYLFNWNGFGATSDRFALRAESIDCM 829
Query: 200 ILLQTLLIPC*RIITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIG 259
+ + L+ TGS +G+I V ILPNR++ + +H+ PVE+LA SH FL S G
Sbjct: 830 VPVTESLL-----CTGSTDGVIRAVNILPNRVVGSVGQHAGEPVEKLALSHCTHFLASSG 884
Query: 260 HDQMLKLWDLDNI 272
HDQ LK W++ +
Sbjct: 885 HDQRLKFWNMSQL 897
>gb|AAT68118.1| AK025355-like [Danio rerio] gi|51467990|ref|NP_001003871.1|
hypothetical protein FLJ20195-like [Danio rerio]
Length = 386
Score = 77.8 bits (190), Expect = 4e-13
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L + I FHP ++++A+G IDGD++L+ YS T + + H +SCR
Sbjct: 31 DIKLEAIVNTIAFHPKQDILAAGDIDGDIYLFSYSC--TEGENKELWSSGHHLKSCRKVL 88
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F + G+ + + S D +I DVE G R+ AH+ +N ++ + E+ A+GDD+G +K
Sbjct: 89 FSSDGQKLFSVSKDKAIHIMDVEAGKLETRIPKAHKVPINAMLLIDENIFATGDDEGTLK 148
Score = 53.9 bits (128), Expect = 6e-06
Identities = 21/61 (34%), Positives = 36/61 (58%)
Query: 212 IITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDN 271
+ S +G+I + ILPNR++ I +H +E +A D FL S HD+++K WD+ +
Sbjct: 264 LCAASTDGVIRAINILPNRVVGSIGQHVGEAIEEIARCRDTHFLASCAHDELIKFWDISS 323
Query: 272 I 272
+
Sbjct: 324 L 324
>gb|AAH95552.1| Flj20195l protein [Danio rerio]
Length = 387
Score = 77.8 bits (190), Expect = 4e-13
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L + I FHP ++++A+G IDGD++L+ YS T + + H +SCR
Sbjct: 31 DIKLEAIVNTIAFHPKQDILAAGDIDGDIYLFSYSC--TEGENKELWSSGHHLKSCRKVL 88
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F + G+ + + S D +I DVE G R+ AH+ +N ++ + E+ A+GDD+G +K
Sbjct: 89 FSSDGQKLFSVSKDKAIHIMDVEAGKLETRIPKAHKVPINAMLLIDENIFATGDDEGTLK 148
Score = 53.9 bits (128), Expect = 6e-06
Identities = 21/61 (34%), Positives = 36/61 (58%)
Query: 212 IITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDN 271
+ S +G+I + ILPNR++ I +H +E +A D FL S HD+++K WD+ +
Sbjct: 264 LCAASTDGVIRAINILPNRVVGSIGQHVGEAIEEIARCRDTHFLASCAHDELIKFWDISS 323
Query: 272 I 272
+
Sbjct: 324 L 324
>ref|XP_640134.1| hypothetical protein DDB0204846 [Dictyostelium discoideum]
gi|60468136|gb|EAL66146.1| hypothetical protein
DDB0204846 [Dictyostelium discoideum]
Length = 408
Score = 77.4 bits (189), Expect = 5e-13
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 214 TGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNIL 273
+GS +G+I +G+ P +++ + EHS +P+ER+A S D ++LGSI HD LK W++ +
Sbjct: 245 SGSSDGIIRFIGLRPKKLLGVVGEHSTFPIERMAISRDNRYLGSISHDFSLKFWNVASFY 304
Query: 274 QGSRSTQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNGHAVGDSNN 328
+ S + AN+ ++DD D+ D D+ K + S G +GD ++
Sbjct: 305 EEDESEDADSANANANEIENDDDDD-DDDDEIEDIENATKVDDDS-GSEMGDDDD 357
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/120 (33%), Positives = 65/120 (53%), Gaps = 5/120 (4%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I+ + F ++FHP+E+L+ +G L L++YS D L + H CR A
Sbjct: 15 DISFNTIPFSLNFHPTEDLLVVSDAEGRLKLFKYSLDENEVK----LSLRPHQSGCRQAN 70
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F + G+ + T S D S+ D+ TGS + + AH+ +N L++ E V +GDD+G IK
Sbjct: 71 FSSDGKYIFTASSDCSMKVIDINTGSILYTREEAHDYPINCLVS-KEFMVFTGDDEGTIK 129
>dbj|BAB15118.1| unnamed protein product [Homo sapiens] gi|46249769|gb|AAH68485.1|
WD repeat domain 55 [Homo sapiens]
gi|38327642|ref|NP_060176.2| WD repeat domain 55 [Homo
sapiens]
Length = 383
Score = 73.9 bits (180), Expect = 6e-12
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L A + FHP+ +L+A+G +DGD+ ++ YS + + H ++CRA
Sbjct: 34 DIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQE--GETKELWSSGHHLKACRAVA 91
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F G+ ++T S D +I DVE G R+ AH A +N L+ + E+ +A+GDD G I+
Sbjct: 92 FSEDGQKLITVSKDKAIHVLDVEQGQLERRVSKAHGAPINSLLLVDENVLATGDDTGGIR 151
Score = 68.6 bits (166), Expect = 3e-10
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 212 IITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDL 269
+ TGS +G+I V ILPNR++ + +H+ PVE LA SH +FL S GHDQ LK WD+
Sbjct: 267 LCTGSTDGVIRAVNILPNRVVGSVGQHTGEPVEELALSHCGRFLASSGHDQRLKFWDM 324
>ref|XP_623745.1| PREDICTED: similar to CG14722-PA [Apis mellifera]
Length = 437
Score = 73.9 bits (180), Expect = 6e-12
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 11 DIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAARFINGGRAVL 70
DI FHP+ N++A I GD++LY+YS NT + + LE+H ++CR F G +
Sbjct: 116 DICFHPNLNMIAIADIGGDIYLYKYS--NTKVELISTLELHL--KACRDIEFNENGTILF 171
Query: 71 TGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
+ + D ++ TD+ET I +N HE + + + E A+GDD+G +K
Sbjct: 172 STAKDLCMMLTDLETEKLIRLYENIHEQPIYTMTIIGEHMFATGDDNGVVK 222
Score = 35.0 bits (79), Expect = 3.1
Identities = 15/58 (25%), Positives = 31/58 (52%), Gaps = 1/58 (1%)
Query: 212 IITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDL 269
+ITG E+GM+ + P+ + + +H+ +E L + + + S HD +K W++
Sbjct: 341 VITGGEDGMLRASSLFPHYHLGIVGQHN-LSIETLDINSNGNLIASSSHDNDIKFWNV 397
>gb|AAS66224.1| LRRG00133 [Rattus norvegicus]
Length = 872
Score = 73.6 bits (179), Expect = 8e-12
Identities = 41/120 (34%), Positives = 66/120 (54%), Gaps = 2/120 (1%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L A + FHP+ +L+A+G +DGD+ ++ YS + + H +SCRA
Sbjct: 522 DIVLEAPASGLAFHPTRDLLAAGDVDGDVFVFAYSCQE--GETKELWSSGHHLKSCRAVV 579
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F G+ ++T S D +I DVE G R+ AH A +N L+ + E+ + +GDD G I+
Sbjct: 580 FSEDGQKLVTVSKDKAIHVLDVEQGQLERRISKAHSAPINSLLLVDENVLVTGDDTGGIR 639
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 212 IITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDN 271
+ TGS +G+I V ILPNR++ + +H+ PVE LA SH FL S GHDQ LK WD+
Sbjct: 755 LCTGSTDGIIRAVNILPNRVVGTVGQHAGEPVEELALSHCGHFLASSGHDQRLKFWDMTQ 814
Query: 272 I 272
+
Sbjct: 815 L 815
>ref|NP_001017932.1| WD repeat domain 55 [Rattus norvegicus]
Length = 384
Score = 73.6 bits (179), Expect = 8e-12
Identities = 41/120 (34%), Positives = 66/120 (54%), Gaps = 2/120 (1%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L A + FHP+ +L+A+G +DGD+ ++ YS + + H +SCRA
Sbjct: 34 DIVLEAPASGLAFHPTRDLLAAGDVDGDVFVFAYSCQE--GETKELWSSGHHLKSCRAVV 91
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F G+ ++T S D +I DVE G R+ AH A +N L+ + E+ + +GDD G I+
Sbjct: 92 FSEDGQKLVTVSKDKAIHVLDVEQGQLERRISKAHSAPINSLLLVDENVLVTGDDTGGIR 151
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 212 IITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDN 271
+ TGS +G+I V ILPNR++ + +H+ PVE LA SH FL S GHDQ LK WD+
Sbjct: 267 LCTGSTDGIIRAVNILPNRVVGTVGQHAGEPVEELALSHCGHFLASSGHDQRLKFWDMTQ 326
Query: 272 I 272
+
Sbjct: 327 L 327
>emb|CAH91474.1| hypothetical protein [Pongo pygmaeus]
Length = 383
Score = 72.8 bits (177), Expect = 1e-11
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L A + FHP+ +L+A+G +DGD+ ++ YS + + H ++CRA
Sbjct: 34 DIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQE--GETKELWSSGHHLKACRAVA 91
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F G+ ++T S D +I DVE G R+ AH A +N L+ + E+ +A+GDD G I+
Sbjct: 92 FSEDGQKLVTVSKDKAIHVLDVEQGRLERRISKAHGAPINSLLLVDENVLATGDDMGGIR 151
Score = 65.9 bits (159), Expect = 2e-09
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 212 IITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDL 269
+ TGS +G+I V ILPNR++ + +H+ PV LA SH +FL S GHDQ LK WD+
Sbjct: 267 LCTGSTDGVIRAVNILPNRVVGSVGQHTGEPVGELALSHCGRFLASSGHDQRLKFWDM 324
>ref|NP_080740.2| WD repeat domain 55 [Mus musculus] gi|26344866|dbj|BAC36082.1|
unnamed protein product [Mus musculus]
gi|26383897|dbj|BAB31225.2| unnamed protein product [Mus
musculus]
Length = 388
Score = 72.0 bits (175), Expect = 2e-11
Identities = 40/120 (33%), Positives = 66/120 (54%), Gaps = 2/120 (1%)
Query: 2 EINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAAR 61
+I L A + FHP+ +L+A+G +DGD+ ++ YS + + H +SCRA
Sbjct: 35 DIVLEAPASGLAFHPTRDLLAAGDVDGDVFVFAYSCQE--GETKELWSSGHHLKSCRAVV 92
Query: 62 FINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCIK 121
F G+ ++T S D +I DVE G R+ AH A +N ++ + E+ + +GDD G I+
Sbjct: 93 FSEDGQKLVTVSKDKAIHILDVEQGQLERRISKAHSAPINSVLLVDENALVTGDDTGGIR 152
Score = 67.4 bits (163), Expect = 6e-10
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 212 IITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDN 271
+ TGS +G+I V ILPNR++ + +H+ PVE LA SH FL S GHDQ LK WD+
Sbjct: 268 LCTGSTDGIIRAVNILPNRVVGTVGQHAGEPVEALALSHCGHFLASSGHDQRLKFWDMTQ 327
Query: 272 I 272
+
Sbjct: 328 L 328
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.326 0.141 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 549,890,271
Number of Sequences: 2540612
Number of extensions: 22322999
Number of successful extensions: 94769
Number of sequences better than 10.0: 695
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 581
Number of HSP's that attempted gapping in prelim test: 92326
Number of HSP's gapped (non-prelim): 3084
length of query: 332
length of database: 863,360,394
effective HSP length: 128
effective length of query: 204
effective length of database: 538,162,058
effective search space: 109785059832
effective search space used: 109785059832
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)
Medicago: description of AC148996.16