BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148652.15 + phase: 0 /pseudo
(121 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD30579.1| Similar to dTDP-D-glucose 4,6-dehydratase [Arabid... 147 4e-35
gb|AAP93963.1| putative UDP-L-rhamnose synthase MUM4 [Arabidopsi... 147 6e-35
gb|AAM98324.1| At3g14790/T21E2_4 [Arabidopsis thaliana] gi|11994... 146 1e-34
ref|XP_652489.1| dTDP-D-glucose 4,6-dehydratase, putative [Entam... 99 2e-20
ref|XP_656509.1| dTDP-D-glucose 4,6-dehydratase, putative [Entam... 98 5e-20
ref|YP_142495.1| GDP mannose 4,6-dehydratase (hydroxysteorid deh... 87 9e-17
ref|XP_322489.1| hypothetical protein [Neurospora crassa] gi|289... 85 4e-16
gb|EAA56353.1| hypothetical protein MG06324.4 [Magnaporthe grise... 85 4e-16
ref|XP_641641.1| hypothetical protein DDB0205781 [Dictyostelium ... 84 6e-16
gb|EAA75284.1| hypothetical protein FG05467.1 [Gibberella zeae P... 82 2e-15
ref|NP_633191.1| dTDP-glucose 4,6-dehydratase [Methanosarcina ma... 80 1e-14
gb|AAM07130.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acet... 77 1e-13
gb|AAO44127.1| dTDP-glucose 4,6-dehydratase [Tropheryma whipplei... 75 3e-13
gb|AAB52650.1| Hypothetical protein F53B1.4 [Caenorhabditis eleg... 73 1e-12
emb|CAE68352.1| Hypothetical protein CBG14085 [Caenorhabditis br... 73 1e-12
emb|CAE60116.1| Hypothetical protein CBG03656 [Caenorhabditis br... 73 1e-12
ref|XP_522697.1| PREDICTED: hypothetical protein XP_522697 [Pan ... 73 2e-12
ref|NP_391662.1| spore coat polysaccharide synthesis [Bacillus s... 72 2e-12
gb|AAH33675.1| TGDS protein [Homo sapiens] gi|55959285|emb|CAI12... 72 2e-12
emb|CAI12410.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|55... 72 2e-12
>gb|AAD30579.1| Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana]
gi|20148285|gb|AAM10033.1| similar to dTDP-D-glucose
4,6-dehydratase [Arabidopsis thaliana]
gi|15218420|ref|NP_177978.1| NAD-dependent
epimerase/dehydratase family protein [Arabidopsis
thaliana] gi|62901057|sp|Q9SYM5|RHM1_ARATH Probable
rhamnose biosynthetic enzyme 1
gi|14596091|gb|AAK68773.1| Similar to dTDP-D-glucose
4,6-dehydratase [Arabidopsis thaliana]
Length = 669
Score = 147 bits (372), Expect = 4e-35
Identities = 73/106 (68%), Positives = 83/106 (77%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETDENAV 60
MHFAAQTHVDNS+ NSFEFT+ + Q++ FIHVSTD+ YGETDE+A+
Sbjct: 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAL 144
Query: 61 VGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
VGNHEASQLL TNPYSA K GAEMLVM+YGRSYGLPVITTRG+ VY
Sbjct: 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVY 190
>gb|AAP93963.1| putative UDP-L-rhamnose synthase MUM4 [Arabidopsis thaliana]
gi|31559259|emb|CAD92667.1| putative NDP-rhamnose
synthase [Arabidopsis thaliana]
gi|8671876|gb|AAF78439.1| Contains similarity to
dTPD-D-glucose-4,6-dehydratase from Sphingomonas sp.S88
gb|U51197 and contains a NAD dependent
epimerase/dehydratase PF|01370 domain. [Arabidopsis
thaliana] gi|42562732|ref|NP_564633.2| NAD-dependent
epimerase/dehydratase family protein [Arabidopsis
thaliana] gi|62901054|sp|Q9LPG6|RHM2_ARATH Probable
rhamnose biosynthetic enzyme 2 (RHAMNOSE BIOSYNTHESIS 2
protein) (NDP-rhamnose synthase) (MUCILAGE-MODIFIED4
protein) (UDP-L-rhamnose synthase MUM4)
gi|12324032|gb|AAG51981.1| dTDP-D-glucose
4,6-dehydratase, putative; 102946-105028 [Arabidopsis
thaliana]
Length = 667
Score = 147 bits (371), Expect = 6e-35
Identities = 73/106 (68%), Positives = 82/106 (76%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETDENAV 60
MHFAAQTHVDNS+ NSFEFT+ + Q++ FIHVSTD+ YGETDE+A
Sbjct: 87 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAA 146
Query: 61 VGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
VGNHEASQLL TNPYSA K GAEMLVM+YGRSYGLPVITTRG+ VY
Sbjct: 147 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVY 192
>gb|AAM98324.1| At3g14790/T21E2_4 [Arabidopsis thaliana]
gi|11994590|dbj|BAB02645.1| unnamed protein product
[Arabidopsis thaliana] gi|19310443|gb|AAL84958.1|
AT3g14790/T21E2_4 [Arabidopsis thaliana]
gi|62901052|sp|Q9LH76|RHM3_ARATH Probable rhamnose
biosynthetic enzyme 3 gi|15231926|ref|NP_188097.1|
NAD-dependent epimerase/dehydratase family protein
[Arabidopsis thaliana]
Length = 664
Score = 146 bits (369), Expect = 1e-34
Identities = 73/106 (68%), Positives = 82/106 (76%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETDENAV 60
MHFAAQTHVDNS+ NSFEFT+ + Q++ FIHVSTD+ YGETDE+A
Sbjct: 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAS 144
Query: 61 VGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
VGNHEASQLL TNPYSA K GAEMLVM+YGRSYGLPVITTRG+ VY
Sbjct: 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVY 190
>ref|XP_652489.1| dTDP-D-glucose 4,6-dehydratase, putative [Entamoeba histolytica
HM-1:IMSS] gi|56469346|gb|EAL47103.1| dTDP-D-glucose
4,6-dehydratase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 341
Score = 99.4 bits (246), Expect = 2e-20
Identities = 55/107 (51%), Positives = 71/107 (65%), Gaps = 6/107 (5%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSK-NQVKGFIHVSTDKFYGETDENA 59
+HFAAQTHVDNS+ NSF+FT + L+VSK N +K FIHVSTD+ YG+ NA
Sbjct: 86 LHFAAQTHVDNSFGNSFQFTHNNIYGTHVL--LEVSKANHIKRFIHVSTDEVYGQVIGNA 143
Query: 60 VVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
N S L TNPY+A K GAE + S+ +S+GLP+I TRG+ V+
Sbjct: 144 ATEN---SLLNPTNPYAATKAGAEFIARSFYQSFGLPLIITRGNNVF 187
>ref|XP_656509.1| dTDP-D-glucose 4,6-dehydratase, putative [Entamoeba histolytica
HM-1:IMSS] gi|56473710|gb|EAL51122.1| dTDP-D-glucose
4,6-dehydratase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 342
Score = 97.8 bits (242), Expect = 5e-20
Identities = 53/107 (49%), Positives = 71/107 (65%), Gaps = 6/107 (5%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSK-NQVKGFIHVSTDKFYGETDENA 59
+HFAAQTHVDNS+ NSF+FT + L+++K N +K FIHVSTD+ YG+ NA
Sbjct: 84 LHFAAQTHVDNSFGNSFQFTHNNIYGTHVL--LEIAKANHIKRFIHVSTDEVYGQVIGNA 141
Query: 60 VVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
N S L TNPYSA K GAE + ++ +S+GLP+I TRG+ V+
Sbjct: 142 ATEN---SLLNPTNPYSATKAGAEFIARAFYQSFGLPLIITRGNNVF 185
>ref|YP_142495.1| GDP mannose 4,6-dehydratase (hydroxysteorid dehydrogenase?)
[Acanthamoeba polyphaga mimivirus]
gi|55416766|gb|AAV50416.1| GDP mannose 4,6-dehydratase
(hydroxysteorid dehydrogenase?) [Acanthamoeba polyphaga
mimivirus]
Length = 323
Score = 87.0 bits (214), Expect = 9e-17
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETDENAV 60
+HFAA +HVDNS++NS FT+T+ ++K F H+STD+ YGE D
Sbjct: 77 VHFAAHSHVDNSFKNSLAFTETNVFGTHVLLECSRMYGKLKLFFHMSTDEVYGEIDTTDT 136
Query: 61 VGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
+ E S L TNPY+A K GAE +V SY SY LP+I R + VY
Sbjct: 137 --SREVSLLCPTNPYAATKAGAEHIVKSYFLSYKLPIIIARCNNVY 180
>ref|XP_322489.1| hypothetical protein [Neurospora crassa] gi|28918378|gb|EAA28053.1|
hypothetical protein [Neurospora crassa]
Length = 428
Score = 85.1 bits (209), Expect = 4e-16
Identities = 54/117 (46%), Positives = 68/117 (57%), Gaps = 7/117 (5%)
Query: 2 HFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGET--DENA 59
HFAAQ+HVD S+ N F FT T+ K +K FIHVSTD+ YGE DE+
Sbjct: 121 HFAAQSHVDLSFGNPFGFTHTNVYGTHVLLE-SARKAGIKRFIHVSTDEVYGEVKDDEDD 179
Query: 60 VVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVYPFSHERKESI 116
++ E S L TNPY+A K AEMLV SY +S+ LP+I R + VY H+ E I
Sbjct: 180 LL---ETSILAPTNPYAASKAAAEMLVNSYKKSFKLPIIIVRSNNVYG-PHQYPEKI 232
>gb|EAA56353.1| hypothetical protein MG06324.4 [Magnaporthe grisea 70-15]
gi|39976843|ref|XP_369809.1| hypothetical protein
MG06324.4 [Magnaporthe grisea 70-15]
Length = 343
Score = 85.1 bits (209), Expect = 4e-16
Identities = 53/118 (44%), Positives = 69/118 (57%), Gaps = 9/118 (7%)
Query: 2 HFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGET---DEN 58
HFAAQ+HVD S+ NS+ FT T+ K ++ FIH+STD+ YGE DE+
Sbjct: 44 HFAAQSHVDLSFGNSYSFTHTNVYGTHVLLE-SAKKVGIRRFIHISTDEVYGEVKDDDED 102
Query: 59 AVVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVYPFSHERKESI 116
+ E+S L TNPY+A K AEMLV SY +S+ LPVI R + VY H+ E I
Sbjct: 103 LL----ESSILAPTNPYAASKAAAEMLVHSYQKSFKLPVIIVRSNNVYG-PHQYPEKI 155
>ref|XP_641641.1| hypothetical protein DDB0205781 [Dictyostelium discoideum]
gi|60469683|gb|EAL67671.1| hypothetical protein
DDB0205781 [Dictyostelium discoideum]
Length = 434
Score = 84.3 bits (207), Expect = 6e-16
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 11/115 (9%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKN-QVKGFIHVSTDKFYGE----- 54
+H AA THVDNS++ S +FT+ + L + L+ KN ++K FI+VSTD+ YG
Sbjct: 88 IHLAAYTHVDNSFKQSIKFTENNI--LGTHYLLETCKNYKLKKFIYVSTDEVYGSGLIED 145
Query: 55 -TDENAVVG--NHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
D N + ++E S L TNPYSA K GAE LV SY +S+ LPVI TR + +Y
Sbjct: 146 NDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFKLPVIITRANNIY 200
>gb|EAA75284.1| hypothetical protein FG05467.1 [Gibberella zeae PH-1]
gi|46122179|ref|XP_385643.1| hypothetical protein
FG05467.1 [Gibberella zeae PH-1]
Length = 449
Score = 82.4 bits (202), Expect = 2e-15
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGET--DEN 58
+HFAAQ+HVD S+ NS+ FT T+ K + FIHVSTD+ YGE D++
Sbjct: 128 LHFAAQSHVDLSFGNSYGFTHTNVYGTHVLLE-SAKKVGIGRFIHVSTDEVYGEVKEDDD 186
Query: 59 AVVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVYPFSHERKESI 116
++ E S L TNPY+A K AEMLV SY +S+ LP I R + VY H+ E I
Sbjct: 187 DLL---ETSILAPTNPYAASKAAAEMLVQSYQKSFKLPAIIVRSNNVYG-PHQYPEKI 240
>ref|NP_633191.1| dTDP-glucose 4,6-dehydratase [Methanosarcina mazei Go1]
gi|20905618|gb|AAM30863.1| dTDP-glucose 4,6-dehydratase
[Methanosarcina mazei Goe1]
Length = 321
Score = 79.7 bits (195), Expect = 1e-14
Identities = 42/101 (41%), Positives = 64/101 (62%), Gaps = 4/101 (3%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETDENAV 60
+HFAA++HVD S E+ F +T+ + + ++ N++K FIHVSTD+ YG T E +
Sbjct: 80 VHFAAESHVDRSIEDGSVFVRTNVLGTNTLLQSALA-NKIKKFIHVSTDEVYGSTMEGSF 138
Query: 61 VGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTR 101
E +L ++PYS+ K G+++L MSY +YGLPV TR
Sbjct: 139 T---ETDKLNPSSPYSSSKAGSDLLAMSYHTTYGLPVCITR 176
>gb|AAM07130.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans str. C2A]
gi|20092575|ref|NP_618650.1| dTDP-glucose
4,6-dehydratase [Methanosarcina acetivorans C2A]
Length = 318
Score = 76.6 bits (187), Expect = 1e-13
Identities = 39/101 (38%), Positives = 62/101 (60%), Gaps = 4/101 (3%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETDENAV 60
+HFAA++HVD S E+ F +T+ + + ++ N +K F+H+STD+ YG E +
Sbjct: 77 VHFAAESHVDRSIEDGSVFVRTNVLGTNTLLQSALANN-IKKFVHISTDEVYGSIKEGSF 135
Query: 61 VGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTR 101
E +L ++PYS+ K G+++L MSY +YGLPV TR
Sbjct: 136 T---ETDKLNPSSPYSSSKAGSDLLAMSYYTTYGLPVCITR 173
>gb|AAO44127.1| dTDP-glucose 4,6-dehydratase [Tropheryma whipplei str. Twist]
gi|28572207|ref|NP_788987.1| putative dehydratase
[Tropheryma whipplei TW08/27]
gi|28410338|emb|CAD66724.1| putative dehydratase
[Tropheryma whipplei TW08/27]
gi|28492997|ref|NP_787158.1| dTDP-glucose
4,6-dehydratase [Tropheryma whipplei str. Twist]
Length = 327
Score = 75.5 bits (184), Expect = 3e-13
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVS-KNQVKGFIHVSTDKFYGETDENA 59
+HFAA+THVD S +N+ F +T+ L + R L+ + +N + FIH+STD+ YG + +
Sbjct: 82 VHFAAETHVDRSIKNASAFVETNV--LGTGRLLEAAARNNIDRFIHISTDEVYGSIESGS 139
Query: 60 VVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY-PFSHERK 113
E LL +PYSA K +++LV SY ++Y LPV TR Y P+ K
Sbjct: 140 W---DENQPLLPNSPYSASKAASDLLVRSYHKTYDLPVCITRCSNNYGPYQFPEK 191
>gb|AAB52650.1| Hypothetical protein F53B1.4 [Caenorhabditis elegans]
gi|17568069|ref|NP_508390.1| dTDP-glucose (XC730)
[Caenorhabditis elegans] gi|7437263|pir||T16444
hypothetical protein F53B1.4 - Caenorhabditis elegans
Length = 342
Score = 73.2 bits (178), Expect = 1e-12
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSK--NQVKGFIHVSTDKFYGETDEN 58
+HFAA THVD SY + Q + + + V+ VK +H+STD+ YG++ E+
Sbjct: 88 IHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYKGVKKLVHISTDEVYGDSFED 147
Query: 59 AVVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
+ AS TNPY+A K EM++ SY SY LP + R + VY
Sbjct: 148 TTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYVMVRMNNVY 195
>emb|CAE68352.1| Hypothetical protein CBG14085 [Caenorhabditis briggsae]
Length = 342
Score = 73.2 bits (178), Expect = 1e-12
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSK--NQVKGFIHVSTDKFYGETDEN 58
+HFAA THVD SY + Q + + + V+ VK +H+STD+ YG++ E+
Sbjct: 88 IHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYKGVKKLVHISTDEVYGDSFED 147
Query: 59 AVVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
+ AS TNPY+A K EM++ SY SY LP + R + VY
Sbjct: 148 TTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYVMVRMNNVY 195
>emb|CAE60116.1| Hypothetical protein CBG03656 [Caenorhabditis briggsae]
Length = 631
Score = 73.2 bits (178), Expect = 1e-12
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETD--EN 58
+HFAA Y + E Q + + + F +++ F+H+STD+ YG++D EN
Sbjct: 87 IHFAADCTSTRCYNETAEAVQNNILSFIQFLDTVRHYGKIQRFVHISTDEVYGDSDLSEN 146
Query: 59 AVVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
G E+S+L+ NPY+A KI E V +Y + Y LP++T R + +Y
Sbjct: 147 EQ-GKVESSRLMPGNPYAATKIAGEAYVRAYQKQYNLPIVTARMNNIY 193
>ref|XP_522697.1| PREDICTED: hypothetical protein XP_522697 [Pan troglodytes]
Length = 472
Score = 72.8 bits (177), Expect = 2e-12
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETDENAV 60
+HFAAQTHVD S+ ++FEFT + S + +V+ FI+VSTD+ YG + +
Sbjct: 218 LHFAAQTHVDLSFVHAFEFTYVNVYGTHVLVSA-AHEARVEKFIYVSTDEVYGGSLDKEF 276
Query: 61 VGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
E+S TNPY++ K AE V SY Y PV+ TR VY
Sbjct: 277 ---DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVY 319
>ref|NP_391662.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp.
subtilis str. 168] gi|2636318|emb|CAB15809.1| spsJ
[Bacillus subtilis subsp. subtilis str. 168]
gi|413996|emb|CAA51628.1| ipa-72d [Bacillus subtilis]
gi|730819|sp|P39630|SPSJ_BACSU Spore coat polysaccharide
biosynthesis protein spsJ
Length = 315
Score = 72.4 bits (176), Expect = 2e-12
Identities = 44/116 (37%), Positives = 63/116 (53%), Gaps = 7/116 (6%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGE--TDEN 58
+HFAA++HVD S + F T+ M V K + K IH+STD+ YG+ D+
Sbjct: 79 IHFAAESHVDRSISQAEPFITTNVMGTYRLAEA-VLKGKAKKLIHISTDEVYGDLKADDP 137
Query: 59 AVVGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY-PFSHERK 113
A E + L NPYSA K +++LV+SY +++ LP I TR Y P+ H K
Sbjct: 138 AFT---ETTPLSPNNPYSASKASSDLLVLSYVKTHKLPAIITRCSNNYGPYQHSEK 190
>gb|AAH33675.1| TGDS protein [Homo sapiens] gi|55959285|emb|CAI12411.1| TDP-glucose
4,6-dehydratase [Homo sapiens]
gi|55957296|emb|CAI12084.1| TDP-glucose 4,6-dehydratase
[Homo sapiens] gi|4128133|emb|CAA06840.1| dTDP-D-glucose
4,6-dehydratase [Homo sapiens]
gi|30173226|sp|O95455|TGDS_HUMAN dTDP-D-glucose
4,6-dehydratase gi|5737699|gb|AAD50061.1| dTDP-glucose
4,6-dehydratase like protein [Homo sapiens]
gi|7657641|ref|NP_055120.1| TDP-glucose 4,6-dehydratase
[Homo sapiens]
Length = 350
Score = 72.4 bits (176), Expect = 2e-12
Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETDENAV 60
+HFAAQTHVD S+ +FEFT + S + +V+ FI+VSTD+ YG + +
Sbjct: 96 LHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSA-AHEARVEKFIYVSTDEVYGGSLDKEF 154
Query: 61 VGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
E+S TNPY++ K AE V SY Y PV+ TR VY
Sbjct: 155 ---DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVY 197
>emb|CAI12410.1| TDP-glucose 4,6-dehydratase [Homo sapiens]
gi|55957295|emb|CAI12083.1| TDP-glucose 4,6-dehydratase
[Homo sapiens]
Length = 187
Score = 72.4 bits (176), Expect = 2e-12
Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 1 MHFAAQTHVDNSYENSFEFTQTSFMELMSFRSLQVSKNQVKGFIHVSTDKFYGETDENAV 60
+HFAAQTHVD S+ +FEFT + S + +V+ FI+VSTD+ YG + +
Sbjct: 64 LHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSA-AHEARVEKFIYVSTDEVYGGSLDKEF 122
Query: 61 VGNHEASQLLETNPYSAMKIGAEMLVMSYGRSYGLPVITTRGDRVY 106
E+S TNPY++ K AE V SY Y PV+ TR VY
Sbjct: 123 ---DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVY 165
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.130 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 183,827,177
Number of Sequences: 2540612
Number of extensions: 5894898
Number of successful extensions: 15914
Number of sequences better than 10.0: 843
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 439
Number of HSP's that attempted gapping in prelim test: 14690
Number of HSP's gapped (non-prelim): 849
length of query: 121
length of database: 863,360,394
effective HSP length: 97
effective length of query: 24
effective length of database: 616,921,030
effective search space: 14806104720
effective search space used: 14806104720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC148652.15