BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148532.2 - phase: 0
(356 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_470269.1| Hypothetical protein [Oryza sativa (japonica cu... 201 2e-50
gb|AAC02749.1| hypothetical protein [Arabidopsis thaliana] gi|15... 84 8e-15
ref|NP_171708.1| pentatricopeptide (PPR) repeat-containing prote... 83 1e-14
emb|CAB80625.1| putative protein [Arabidopsis thaliana] gi|50421... 78 4e-13
gb|AAO64144.1| unknown protein [Arabidopsis thaliana] gi|4056478... 77 1e-12
ref|NP_913476.1| Ipomoea nil leaf protein like protein [Oryza sa... 76 1e-12
gb|AAM97065.1| putative membrane-associated salt-inducible prote... 76 1e-12
dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thalian... 76 1e-12
ref|NP_176447.1| pentatricopeptide (PPR) repeat-containing prote... 76 1e-12
gb|AAP04079.1| unknown protein [Arabidopsis thaliana] gi|9759377... 76 2e-12
dbj|BAD08214.1| fertility restorer [Oryza sativa (indica cultiva... 76 2e-12
dbj|BAD08213.1| hypothetical protein [Oryza sativa (indica culti... 75 2e-12
dbj|BAD20284.1| hypotetical protein [Oryza sativa (indica cultiv... 75 2e-12
gb|AAM93691.1| hypothetical protein [Oryza sativa (japonica cult... 75 4e-12
gb|AAD56322.1| hypothetical protein [Arabidopsis thaliana] gi|15... 75 4e-12
ref|NP_909693.1| putative pentatricopeptide repeat protein [Oryz... 75 4e-12
gb|AAF19704.1| F2K11.22 [Arabidopsis thaliana] gi|15222409|ref|N... 75 4e-12
gb|AAF75803.1| Contains weak similarity to leaf protein from Ipo... 75 4e-12
ref|NP_176481.1| pentatricopeptide (PPR) repeat-containing prote... 75 4e-12
emb|CAB86023.1| putative protein [Arabidopsis thaliana] gi|11358... 74 5e-12
>ref|XP_470269.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|22773243|gb|AAN06849.1| Hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 409
Score = 201 bits (512), Expect = 2e-50
Identities = 110/278 (39%), Positives = 168/278 (59%), Gaps = 2/278 (0%)
Query: 18 VLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLIS 77
VLEW LEKL+KE ++D +S +I C + KN + + VF +E +G++ + +FN+LI+
Sbjct: 80 VLEWKLEKLIKEGIRDCEPYSVIIRFCRETKNAEFAMKVFEFVEELGIQLNTGIFNALIN 139
Query: 78 ACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLG 137
A LS D++ A +L+E ME E+ KP+ TY+ FISAFS+ G+ AM++WY A K G
Sbjct: 140 AFLSVGDLLAAMTLYEAMEDIEDCKPNSATYDAFISAFSRLGSGHAMMSWYLASKDAGFT 199
Query: 138 PDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEF 197
P ++ FE +I+G V + A+ VFEEM E+ PN ILE+ L+ +K R F
Sbjct: 200 PSIKAFEYLITGFVKLDRLDDAEVVFEEMICFEIKPNFAILEAKLELLSRRKDPNRVKVF 259
Query: 198 FKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPIDSGVLSQIHCGIVTMY 257
+ V D ++SE L L + ++ ++++LL + S L+++HCGI+ Y
Sbjct: 260 LELVSDGNQELSEATVERLTRLCLYEDKIGELDQLLSLVQGMHTSS--LTKLHCGIIRFY 317
Query: 258 AMLDRLDEVELSVGRMLKQGMSFTSSDDVEKVICSYFR 295
A DRL ++E ++ +ML GM F S+DVE VICSYFR
Sbjct: 318 ANADRLSDMEHAIFQMLDNGMVFAHSEDVEAVICSYFR 355
>gb|AAC02749.1| hypothetical protein [Arabidopsis thaliana]
gi|15224571|ref|NP_180636.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|25370680|pir||F84712 hypothetical protein At2g30780
[imported] - Arabidopsis thaliana
Length = 452
Score = 83.6 bits (205), Expect = 8e-15
Identities = 64/291 (21%), Positives = 135/291 (45%), Gaps = 20/291 (6%)
Query: 14 ILIQVLEWILEKLLKENVKDH------GRFSELIFLCGKLKNVQLGINVFTSMEGVGVKP 67
+ +QVLEW + KD+ +++ I + G+ +++ L + +F ++
Sbjct: 84 LALQVLEW------RRGQKDYCIPLTSEEYAKGIKIAGRARDINLAVYLFDEAAKKRMQ- 136
Query: 68 TSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAW 127
T+ V+NSL+S + + SLF+ + P TYN +S + + V M A
Sbjct: 137 TASVYNSLMSVYMWNGLAEECQSLFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAA 196
Query: 128 YSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCS 187
+ + L P+ T+ +I+G + + N++ + F+EMK + P+ + ML+G+ +
Sbjct: 197 FEELQKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMKRGPVEPDTDTYQLMLRGYAN 256
Query: 188 QKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHE---QGQVEKMEELLETITSYPIDSG 244
+L R E ++ + D S + ++ Y + + +V+K+E LL ++
Sbjct: 257 SGNLNRMEEMYEVIKDQVGVNSGPLVRAMICAYCKKAVEDRVQKIENLLSLLSG----EE 312
Query: 245 VLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGMSFTSSDDVEKVICSYFR 295
L ++ ++ +YA D ++ +E + +Q S + +I +YFR
Sbjct: 313 YLPWLNVLLIRLYAQEDFVEAMESKINEAFEQKTCVNKSSIMRAIIAAYFR 363
Score = 42.0 bits (97), Expect = 0.028
Identities = 52/279 (18%), Positives = 114/279 (40%), Gaps = 40/279 (14%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
++ L+ + G+L V+ F ++ V + P S+ +N LI+ +++ + + F+ M+
Sbjct: 177 YNILVSVYGRLLMVKNMEAAFEELQKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMK 236
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVD----------------------AMLAWYSAKKAT 134
+PD TY + ++ SGN++ AM+ Y K
Sbjct: 237 RGP-VEPDTDTYQLMLRGYANSGNLNRMEEMYEVIKDQVGVNSGPLVRAMICAYCKKAVE 295
Query: 135 GLGPDLQTFESVISG--------CVNSKNYEIADRVFE-EMKISEMIPNVT------ILE 179
++ S++SG + + Y D V E KI+E T I+
Sbjct: 296 DRVQKIENLLSLLSGEEYLPWLNVLLIRLYAQEDFVEAMESKINEAFEQKTCVNKSSIMR 355
Query: 180 SMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSY 239
+++ + + F K W++ ++ +++Y Q + E+ME ++ +
Sbjct: 356 AIIAAYFRCNEVDNLANFVKRAESAGWKLCRSLYHCKIMMYGSQKRFEEMEGVVNEMAE- 414
Query: 240 PIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGM 278
+ G++++ ++ Y + E G+MLK+G+
Sbjct: 415 -TNYGLVTKTFAIMIKAYKNHGMESDAEKVKGKMLKRGL 452
>ref|NP_171708.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 710
Score = 83.2 bits (204), Expect = 1e-14
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 9/224 (4%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
F+ LI G Q + +F +M+ +G+ P+ L FNSL+S L A+ LF+ M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
+ PD +T+N I+ F K+ VD + + PD+ T+ ++I G +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 157 EIADRVFEEM--KISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAA 214
+IA V M K +++ PNV ++++G+C ++ + A F +L + +
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 215 MLVVLYHEQGQVEKMEELL----ETITSYPIDS---GVLSQIHC 251
L+ E + ++++++L + T++ D+ +L + HC
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHC 364
Score = 48.5 bits (114), Expect = 3e-04
Identities = 57/272 (20%), Positives = 108/272 (38%), Gaps = 28/272 (10%)
Query: 50 VQLGINVFTSM--EGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHT 107
V++ NV + M + V P + + +L+ +I A +F M S KP+ T
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM-LSRGLKPNAVT 318
Query: 108 YNNFISAFSKSGNVDAM--LAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEE 165
YN I S++ D + + T PD TF +I ++ + + A +VF+E
Sbjct: 319 YNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378
Query: 166 MKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYH---- 221
M ++ P+ +++ C + RA F + + + + L Y+
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438
Query: 222 ------EQGQVEKM-EELLETITSYPIDSGVLSQIHC-------GIVTMYAMLDR----- 262
+ Q EK+ +L++ P L HC + ML R
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPD 498
Query: 263 LDEVELSVGRMLKQGMSFTSSDDVEKVICSYF 294
L+ EL + +LK G + + D +++++ S +
Sbjct: 499 LETYELLIDGLLKIGEALLAHDTLQRMLRSSY 530
Score = 36.2 bits (82), Expect = 1.5
Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 26/188 (13%)
Query: 66 KPTSLVFNSLISACLSSHDIVTAYSLF-EIMESSENYKPDFHTYNNFISAFSKSGNVDAM 124
KP + +N + ++ A +F ++M+ P +Y I+ + G
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP---SYKTLITGHCREGKFKPA 483
Query: 125 LAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKG 184
PDL+T+E +I G + +A + M S +P T S+L
Sbjct: 484 YELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAE 543
Query: 185 FCSQKSLCRANEFFKFV-----------LDNRWQI--------SETMAAMLVVLYHEQGQ 225
+K ANE F V +D Q+ + A ++V L ++ G
Sbjct: 544 LAKRKF---ANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGY 600
Query: 226 VEKMEELL 233
+ KMEELL
Sbjct: 601 LVKMEELL 608
>emb|CAB80625.1| putative protein [Arabidopsis thaliana] gi|5042178|emb|CAB44697.1|
putative protein [Arabidopsis thaliana]
gi|15235161|ref|NP_195672.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective
2453 [Arabidopsis thaliana] gi|7486051|pir||T09378
hypothetical protein F23K16.250 - Arabidopsis thaliana
Length = 563
Score = 78.2 bits (191), Expect = 4e-13
Identities = 48/219 (21%), Positives = 110/219 (49%), Gaps = 6/219 (2%)
Query: 16 IQVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSL 75
++V W+ ++ + + D+G +S+LI + GK ++ + +F+ M+ G +P + V+N+L
Sbjct: 117 LEVFRWMQKQ--RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNAL 174
Query: 76 ISACLSSHDIVTAYS----LFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAK 131
I+A L + D A + M+ E +P+ TYN + AF++SG VD + A +
Sbjct: 175 ITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL 234
Query: 132 KATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSL 191
+ + PD+ TF V+ + + + V M+ +E P++ ++ + ++
Sbjct: 235 DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEF 294
Query: 192 CRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKME 230
+ + FK ++ ++ + + +++ Y + ++K E
Sbjct: 295 EKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Score = 57.8 bits (138), Expect = 5e-07
Identities = 55/226 (24%), Positives = 104/226 (45%), Gaps = 9/226 (3%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
+F ++ V P FN ++ A + I ++ M S+E KPD T+N I ++
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE-CKPDIITFNVLIDSY 288
Query: 116 SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNV 175
K + M + + + P L TF S+I ++ + A+ VF++M IP+
Sbjct: 289 GKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF 348
Query: 176 TILESMLK--GFCSQKSLCRANEFFKFVLD-NRWQISETMAAMLVVLYHEQGQVEKMEEL 232
E M+ G+C S+ RA E F+ V + +R + T+ AML V Y G + ++L
Sbjct: 349 ITYECMIMMYGYCG--SVSRAREIFEEVGESDRVLKASTLNAMLEV-YCRNGLYIEADKL 405
Query: 233 LETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGM 278
+++ + + + + Y D ++V++ + +M K G+
Sbjct: 406 FHNASAFRVHPD--ASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
>gb|AAO64144.1| unknown protein [Arabidopsis thaliana] gi|4056478|gb|AAC98044.1|
unknown protein [Arabidopsis thaliana]
gi|25408538|pir||B84790 hypothetical protein At2g37230
[imported] - Arabidopsis thaliana
gi|15228104|ref|NP_181260.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 76.6 bits (187), Expect = 1e-12
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 33 DHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLF 92
D F LI GK VQ + +F M+ +GV+ T +NSL L + A F
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 93 EIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVN 152
M S E +P HTYN + F S ++ L ++ K G+ PD TF ++I+G
Sbjct: 244 NKMVS-EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 153 SKNYEIADRVFEEMKISEMIPNVTILESMLKGF 185
K + A+++F EMK +++ P+V +M+KG+
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGY 335
>ref|NP_913476.1| Ipomoea nil leaf protein like protein [Oryza sativa (japonica
cultivar-group)] gi|17385740|dbj|BAB78680.1| putative
leaf protein [Oryza sativa (japonica cultivar-group)]
Length = 636
Score = 76.3 bits (186), Expect = 1e-12
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 13/275 (4%)
Query: 21 WILEKLLKENVKDHG-RFSEL---IFLCGKLKNVQLG--INVFTSMEGVGVKPTSLVFNS 74
W E+L+ E + G R SE I + G + +LG + M+ GV P +VFN+
Sbjct: 277 WRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNT 336
Query: 75 LISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKAT 134
L+ L ++D+ + +ME KPD TY++ ++A S G++ + +
Sbjct: 337 LLKGFLDANDMAAVDDVLGLMEQF-GIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEA 395
Query: 135 GLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRA 194
G+ PD Q + + G V ++ E A+ + +M + PNV +++ G+CS + A
Sbjct: 396 GIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNA 455
Query: 195 NEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPIDSGVLSQ--IHCG 252
+ + D + + L+ Y E Q K EE+L+ + D+GV + +C
Sbjct: 456 VRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQ----DAGVRPKQTTYCL 511
Query: 253 IVTMYAMLDRLDEVELSVGRMLKQGMSFTSSDDVE 287
+ + + ++ ++G G + DD E
Sbjct: 512 VADAWKAVGLVENANRALGSSSSSGDLLDADDDEE 546
Score = 48.1 bits (113), Expect = 4e-04
Identities = 44/220 (20%), Positives = 88/220 (40%), Gaps = 42/220 (19%)
Query: 19 LEWILEKLLKENVK-DHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLIS 77
+ W+L ++ ++ D F+ LI + + + N F M G +PT+ FN+LI
Sbjct: 133 IPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIK 192
Query: 78 ACLSSHDIVTAYSLFEIMESS-----ENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKK 132
+ + +F++M S +P+ TYN + A+ +G ++ + +
Sbjct: 193 GYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMR 252
Query: 133 ATGLGPDLQTFESVISG-CVNSKNYEIADRVFE--------------------------- 164
A+G PD+ T+ ++ S N + + + V E
Sbjct: 253 ASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRL 312
Query: 165 --------EMKISEMIPNVTILESMLKGFCSQKSLCRANE 196
+MK S ++PNV + ++LKGF + ++
Sbjct: 313 GEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDD 352
Score = 34.3 bits (77), Expect = 5.9
Identities = 19/87 (21%), Positives = 38/87 (42%)
Query: 99 ENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEI 158
+ ++P TY ++A + D + + + GL PD F ++I+ V ++
Sbjct: 108 DGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGE 167
Query: 159 ADRVFEEMKISEMIPNVTILESMLKGF 185
A F M S P + +++KG+
Sbjct: 168 ATNTFLRMGHSGCRPTASTFNTLIKGY 194
>gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana] gi|62320656|dbj|BAD95323.1| putative
membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 76.3 bits (186), Expect = 1e-12
Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 9/215 (4%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYS--LFEI 94
F+ +I K ++V +N+F ME G++P + ++SLIS CL S+ + S L ++
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS-CLCSYGRWSDASQLLSDM 283
Query: 95 MESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSK 154
+E N P+ T+N I AF K G Y + PD+ T+ S+++G
Sbjct: 284 IEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 341
Query: 155 NYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAA 214
+ A ++FE M + P+V +++KGFC K + E F+ + +R + +T+
Sbjct: 342 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVGDTVTY 400
Query: 215 MLVV--LYHEQGQVEKMEELLETITSYPIDSGVLS 247
++ L+H+ G + +++ + + S + +++
Sbjct: 401 TTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMT 434
Score = 66.6 bits (161), Expect = 1e-09
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 43 LCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYK 102
LC K + L +N+ ME ++ ++FN++I + + A +LF+ ME ++ +
Sbjct: 197 LC-KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME-TKGIR 254
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
P+ TY++ IS G S + P+L TF ++I V + A+++
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVL 202
+++M + P++ S++ GFC L +A + F+F++
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 354
Score = 63.9 bits (154), Expect = 7e-09
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 17 QVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLI 76
Q+L ++EK + N+ + GK + ++ M + P +NSL+
Sbjct: 278 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE---KLYDDMIKRSIDPDIFTYNSLV 334
Query: 77 SACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGL 136
+ + A +FE M S + + PD TYN I F KS V+ + GL
Sbjct: 335 NGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 393
Query: 137 GPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANE 196
D T+ ++I G + + + A +VF++M + P++ +L G C+ L +A E
Sbjct: 394 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 453
Query: 197 FFKFV 201
F ++
Sbjct: 454 VFDYM 458
Score = 63.2 bits (152), Expect = 1e-08
Identities = 50/246 (20%), Positives = 105/246 (42%), Gaps = 11/246 (4%)
Query: 48 KNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHT 107
K + + + M +G +P ++ F +LI + A +L + M +P+ T
Sbjct: 131 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVT 189
Query: 108 YNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMK 167
Y ++ K G+ D L + +A + D+ F ++I ++ + A +F+EM+
Sbjct: 190 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 249
Query: 168 ISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVE 227
+ PNV S++ CS A++ +++ + + L+ + ++G+
Sbjct: 250 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 309
Query: 228 KMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGMSFTSSDDVE 287
+ E+L + + ID + + + +V + M DRLD+ KQ F S D
Sbjct: 310 EAEKLYDDMIKRSIDPDIFT--YNSLVNGFCMHDRLDKA--------KQMFEFMVSKDCF 359
Query: 288 KVICSY 293
+ +Y
Sbjct: 360 PDVVTY 365
Score = 54.7 bits (130), Expect = 4e-06
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
Query: 41 IFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSEN 100
+F G N Q VF M GV P + ++ L+ ++ + A +F+ M+ SE
Sbjct: 407 LFHDGDCDNAQ---KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE- 462
Query: 101 YKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIAD 160
K D + Y I K+G VD + + G+ P++ T+ ++ISG + + + A
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522
Query: 161 RVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLY 220
+ ++MK +PN ++++ + E + + R+ + ++ +
Sbjct: 523 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 582
Query: 221 HEQGQVEK 228
H+ G+++K
Sbjct: 583 HD-GRLDK 589
Score = 53.1 bits (126), Expect = 1e-05
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Query: 46 KLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDF 105
K K V+ G +F M G+ ++ + +LI D A +F+ M S + PD
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS-DGVPPDI 432
Query: 106 HTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEE 165
TY+ + +G ++ L + + + + D+ + ++I G + + +F
Sbjct: 433 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 492
Query: 166 MKISEMIPNVTILESMLKGFCSQKSLCRANEFFK 199
+ + + PNV +M+ G CS++ L A K
Sbjct: 493 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 526
Score = 35.8 bits (81), Expect = 2.0
Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 1/152 (0%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
F++L+ K+K + I++ M+ + + +N LI+ I A +L M
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 109
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
Y+P T ++ ++ + + +A G PD TF ++I G
Sbjct: 110 KL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 168
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQ 188
A + + M PN+ ++ G C +
Sbjct: 169 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 200
>dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|15237375|ref|NP_199422.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 76.3 bits (186), Expect = 1e-12
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 7/252 (2%)
Query: 50 VQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYN 109
+ L + +M +G+ PT N LI A + V A + PD +TY
Sbjct: 137 LNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYG 196
Query: 110 NFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKIS 169
IS + G +D ++ P + T+ S+I+G SKN + A R EEMK
Sbjct: 197 TLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 170 EMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKM 229
+ PNV S++ G C +A E F+ ++ + + L+ ++ ++++
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 230 EELLETITSYPI--DSGVLSQI---HCGIVTMYAMLDRLDEVELS--VGRMLKQGMSFTS 282
ELL+ + + D+G+ ++ C I + LDE+ L L + +
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 283 SDDVEKVICSYF 294
S++V + +C+ +
Sbjct: 377 SNEVVRGLCANY 388
Score = 60.1 bits (144), Expect = 1e-07
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Query: 43 LCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYK 102
LC V G+ +F M G P S + +LIS I A LF M ++
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM-VEKDCA 224
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
P TY + I+ S NVD + + K+ G+ P++ T+ S++ G A +
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRANE 196
FE M PN+ +++ G C ++ + A E
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVE 318
Score = 55.1 bits (131), Expect = 3e-06
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 10/203 (4%)
Query: 43 LCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYK 102
LCG KNV + M+ G++P ++SL+ + A LFE+M + +
Sbjct: 237 LCGS-KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM-MARGCR 294
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
P+ TY I+ K + + GL PD + VISG + A
Sbjct: 295 PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF 354
Query: 163 FEEMKISEMIPN-------VTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAM 215
+EM + + PN V +++G C+ RA + + +
Sbjct: 355 LDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLES 413
Query: 216 LVVLYHEQGQVEKMEELLETITS 238
LV ++G+ +K +L++ I +
Sbjct: 414 LVKCLCKKGEFQKAVQLVDEIVT 436
>ref|NP_176447.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|25404895|pir||F96651 protein T3P18.15
[imported] - Arabidopsis thaliana
gi|5454201|gb|AAD43616.1| T3P18.15 [Arabidopsis
thaliana]
Length = 634
Score = 76.3 bits (186), Expect = 1e-12
Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 9/215 (4%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYS--LFEI 94
F+ +I K ++V +N+F ME G++P + ++SLIS CL S+ + S L ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS-CLCSYGRWSDASQLLSDM 321
Query: 95 MESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSK 154
+E N P+ T+N I AF K G Y + PD+ T+ S+++G
Sbjct: 322 IEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 155 NYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAA 214
+ A ++FE M + P+V +++KGFC K + E F+ + +R + +T+
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVGDTVTY 438
Query: 215 MLVV--LYHEQGQVEKMEELLETITSYPIDSGVLS 247
++ L+H+ G + +++ + + S + +++
Sbjct: 439 TTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMT 472
Score = 66.6 bits (161), Expect = 1e-09
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 43 LCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYK 102
LC K + L +N+ ME ++ ++FN++I + + A +LF+ ME ++ +
Sbjct: 235 LC-KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME-TKGIR 292
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
P+ TY++ IS G S + P+L TF ++I V + A+++
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVL 202
+++M + P++ S++ GFC L +A + F+F++
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Score = 63.9 bits (154), Expect = 7e-09
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 17 QVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLI 76
Q+L ++EK + N+ + GK + ++ M + P +NSL+
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE---KLYDDMIKRSIDPDIFTYNSLV 372
Query: 77 SACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGL 136
+ + A +FE M S + + PD TYN I F KS V+ + GL
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 137 GPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANE 196
D T+ ++I G + + + A +VF++M + P++ +L G C+ L +A E
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 197 FFKFV 201
F ++
Sbjct: 492 VFDYM 496
Score = 63.2 bits (152), Expect = 1e-08
Identities = 50/246 (20%), Positives = 105/246 (42%), Gaps = 11/246 (4%)
Query: 48 KNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHT 107
K + + + M +G +P ++ F +LI + A +L + M +P+ T
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVT 227
Query: 108 YNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMK 167
Y ++ K G+ D L + +A + D+ F ++I ++ + A +F+EM+
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 168 ISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVE 227
+ PNV S++ CS A++ +++ + + L+ + ++G+
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 228 KMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGMSFTSSDDVE 287
+ E+L + + ID + + + +V + M DRLD+ KQ F S D
Sbjct: 348 EAEKLYDDMIKRSIDPDIFT--YNSLVNGFCMHDRLDKA--------KQMFEFMVSKDCF 397
Query: 288 KVICSY 293
+ +Y
Sbjct: 398 PDVVTY 403
Score = 54.7 bits (130), Expect = 4e-06
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
Query: 41 IFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSEN 100
+F G N Q VF M GV P + ++ L+ ++ + A +F+ M+ SE
Sbjct: 445 LFHDGDCDNAQ---KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE- 500
Query: 101 YKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIAD 160
K D + Y I K+G VD + + G+ P++ T+ ++ISG + + + A
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 161 RVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLY 220
+ ++MK +PN ++++ + E + + R+ + ++ +
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Query: 221 HEQGQVEK 228
H+ G+++K
Sbjct: 621 HD-GRLDK 627
Score = 53.1 bits (126), Expect = 1e-05
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Query: 46 KLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDF 105
K K V+ G +F M G+ ++ + +LI D A +F+ M S + PD
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS-DGVPPDI 470
Query: 106 HTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEE 165
TY+ + +G ++ L + + + + D+ + ++I G + + +F
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 166 MKISEMIPNVTILESMLKGFCSQKSLCRANEFFK 199
+ + + PNV +M+ G CS++ L A K
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Score = 35.8 bits (81), Expect = 2.0
Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 1/152 (0%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
F++L+ K+K + I++ M+ + + +N LI+ I A +L M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
Y+P T ++ ++ + + +A G PD TF ++I G
Sbjct: 148 KL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQ 188
A + + M PN+ ++ G C +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
>gb|AAP04079.1| unknown protein [Arabidopsis thaliana] gi|9759377|dbj|BAB10028.1|
unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis
thaliana] gi|15239874|ref|NP_196771.1| pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 75.9 bits (185), Expect = 2e-12
Identities = 65/280 (23%), Positives = 123/280 (43%), Gaps = 10/280 (3%)
Query: 1 MLLRFIIEILIINILIQVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSM 60
+LL +++ + I V ILE + + +G+ I KL +V G+ +F M
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK---AIQAAVKLSDVGKGLELFNRM 205
Query: 61 EGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGN 120
+ + P+ ++N LI + A LF+ M + P TYN I + K+GN
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM-LARRLLPSLITYNTLIDGYCKAGN 264
Query: 121 VDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILES 180
+ KA + P L TF +++ G + E A+ V +EMK +P+
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 181 MLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYP 240
+ G+ S + A ++ +D+ +++ ++L+ ++G++EK EE+L
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL----GRE 380
Query: 241 IDSGVLSQ--IHCGIVTMYAMLDRLDEVELSVGRMLKQGM 278
+ G++ I+ ++ Y L + + M KQGM
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Score = 67.8 bits (164), Expect = 5e-10
Identities = 58/286 (20%), Positives = 132/286 (45%), Gaps = 23/286 (8%)
Query: 11 IINILIQVLEWILEKLLKENVKDHGR------FSELIFLCGKLKNVQLGINVFTSMEGVG 64
+IN L + + + +++K +++D G ++ LI C ++ M G
Sbjct: 500 LINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 65 VKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAM 124
++ + +N+LI + + A L + S + KPD TYN+ IS + +GNV
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLL-LEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 125 LAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKG 184
+A Y K +G+ P L+T+ +IS C + E+ +R+F EM + P++ + +L
Sbjct: 619 IALYEEMKRSGIKPTLKTYHLLISLC-TKEGIELTERLFGEMSLK---PDLLVYNGVLHC 674
Query: 185 FCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPIDS- 243
+ + +A K +++ + +T L++ + G++ ++ L++ + + ++
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 244 ----GVLSQIHCGI---VTMYAMLDRLDE----VELSVGRMLKQGM 278
++ + HC + ++ Y + E +++ +G L G+
Sbjct: 735 ADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 56.2 bits (134), Expect = 1e-06
Identities = 48/212 (22%), Positives = 90/212 (41%), Gaps = 6/212 (2%)
Query: 20 EWILEKLLKENVK-DHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISA 78
E +L ++ ++ +K D ++ LI G NVQ I ++ M+ G+KPT ++ LIS
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643
Query: 79 CLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGP 138
C L E + + KPD YN + ++ G+++ +G
Sbjct: 644 CTKE-----GIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 139 DLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFF 198
D T+ S+I G + + +EM EM P ++KG C K A ++
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWY 758
Query: 199 KFVLDNRWQISETMAAMLVVLYHEQGQVEKME 230
+ + + + + + LV E+ + ++ E
Sbjct: 759 REMQEKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Score = 55.1 bits (131), Expect = 3e-06
Identities = 32/131 (24%), Positives = 59/131 (44%), Gaps = 1/131 (0%)
Query: 64 GVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDA 123
G+ P +++N++I D+V A E ME + KPD YN I F + G ++
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK-QGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 124 MLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLK 183
+ K G+ P ++T+ +I G ++ + +EM+ + +PNV +++
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 184 GFCSQKSLCRA 194
C L A
Sbjct: 503 CLCKGSKLLEA 513
Score = 44.3 bits (103), Expect = 0.006
Identities = 43/180 (23%), Positives = 77/180 (41%), Gaps = 3/180 (1%)
Query: 59 SMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKS 118
+ME G+KP L +N LI ++ A M+ + P TYN I + +
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL-KGVSPSVETYNILIGGYGRK 472
Query: 119 GNVDAMLAWYSAKKATGLGPDLQTFESVISG-CVNSKNYEIADRVFEEMKISEMIPNVTI 177
D + G P++ ++ ++I+ C SK E A V +M+ + P V I
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE-AQIVKRDMEDRGVSPKVRI 531
Query: 178 LESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETIT 237
++ G CS+ + A F K +L +++ L+ G++ + E+LL I+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Score = 38.9 bits (89), Expect = 0.24
Identities = 38/186 (20%), Positives = 73/186 (38%), Gaps = 6/186 (3%)
Query: 24 EKLLKEN-----VKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISA 78
E +LKE V D FS L + + + V+ + GVK + + L++A
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 79 CLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGP 138
I A + E ++ P+ YN I + + G++ A + G+ P
Sbjct: 364 LCKEGKIEKAEEILG-REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 139 DLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFF 198
D + +I E A++ +MK+ + P+V ++ G+ + + +
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 199 KFVLDN 204
K + DN
Sbjct: 483 KEMEDN 488
Score = 34.7 bits (78), Expect = 4.5
Identities = 29/121 (23%), Positives = 53/121 (42%), Gaps = 4/121 (3%)
Query: 61 EGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGN 120
+ +G+ T+ +NSLI L + SL + M + E +P+ TYN + + +
Sbjct: 694 KSIGLDKTT--YNSLILGQLKVGKLCEVRSLIDEMNARE-MEPEADTYNIIVKGHCEVKD 750
Query: 121 VDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILES 180
+ WY + G D+ ++SG + A+ V EM M+ +VT+ E
Sbjct: 751 YMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN-GRMLGDVTVDED 809
Query: 181 M 181
+
Sbjct: 810 L 810
>dbj|BAD08214.1| fertility restorer [Oryza sativa (indica cultivar-group)]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa (indica
cultivar-group)] gi|33859440|dbj|BAC77665.2| PPR protein
[Oryza sativa (indica cultivar-group)]
gi|60390261|sp|Q76C99|RF1_ORYSA Rf1 protein,
mitochondrial precursor (PPR protein) (Fertility
restorer) (Restorer for CMS) gi|46091159|dbj|BAD13708.1|
PPR protein [Oryza sativa (indica cultivar-group)]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza
sativa (indica cultivar-group)]
Length = 791
Score = 75.9 bits (185), Expect = 2e-12
Identities = 51/223 (22%), Positives = 103/223 (45%), Gaps = 3/223 (1%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
+F SM G+KP + +L+ + +V + L ++M + PD + ++ I A+
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPDHYVFSILICAY 381
Query: 116 SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNV 175
+K G VD + +S + GL P+ T+ +VI S E A FE+M + P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 176 TILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLET 235
+ S++ G C+ RA E +LD ++ ++ + ++G+V + E+L E
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 236 ITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGM 278
+ + V++ + ++ Y + ++DE + M+ G+
Sbjct: 502 MVRIGVKPNVIT--YNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Score = 63.2 bits (152), Expect = 1e-08
Identities = 41/217 (18%), Positives = 103/217 (46%), Gaps = 5/217 (2%)
Query: 64 GVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDA 123
G+ P + +NS+I+A + + A + M + PD TYN+ + + SG
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKE 284
Query: 124 MLAWYSAKKATGLGPDLQTFESVISG-CVNSKNYEIADRVFEEMKISEMIPNVTILESML 182
+ + ++ G+ PD+ T+ ++ C N + E A ++F+ M + P +T ++L
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME-ARKIFDSMTKRGLKPEITTYGTLL 343
Query: 183 KGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPID 242
+G+ ++ +L + ++ N + ++L+ Y +QG+V++ + + ++
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 403
Query: 243 SGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGMS 279
++ + ++ + R+++ L +M+ +G+S
Sbjct: 404 PNAVT--YGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Score = 61.6 bits (148), Expect = 3e-08
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 64 GVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDA 123
G+ ++ FNS+I + ++ + LFE+M KP+ TYN I+ + +G +D
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI-GVKPNVITYNTLINGYCLAGKMDE 529
Query: 124 MLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLK 183
+ S + GL P+ T+ ++I+G E A +F+EM+ S + P++ +L+
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 184 GFCSQKSLCRANEFFKFVLDNRWQI 208
G + A E + + ++ QI
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQI 614
Score = 52.8 bits (125), Expect = 2e-05
Identities = 33/144 (22%), Positives = 66/144 (44%), Gaps = 1/144 (0%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
+F M +GVKP + +N+LI+ + + A L M S KP+ TY+ I+ +
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV-GLKPNTVTYSTLINGY 556
Query: 116 SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNV 175
K ++ L + +++G+ PD+ T+ ++ G ++ A ++ + S +
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 176 TILESMLKGFCSQKSLCRANEFFK 199
+ +L G C K A + F+
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQ 640
Score = 52.4 bits (124), Expect = 2e-05
Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 10/216 (4%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSEN--YKPDFHTYNNFIS 113
V M +G P +N L+ + A L +M PD +Y I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 114 AFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIP 173
F K G+ D + Y G+ PD+ T+ S+I+ ++ + A V M + ++P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 174 NVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELL 233
+ S+L G+CS A F K + + + ++L+ + G+ + ++
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 234 ETITSYPIDS-----GVLSQIHC---GIVTMYAMLD 261
+++T + G L Q + +V M+ +LD
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Score = 49.3 bits (116), Expect = 2e-04
Identities = 47/225 (20%), Positives = 94/225 (40%), Gaps = 6/225 (2%)
Query: 27 LKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIV 86
+K NV + L GK+ + + + M VG+KP ++ +++LI+ +
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEA---MKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 87 TAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESV 146
A LF+ MESS PD TYN + ++ A Y +G +L T+ +
Sbjct: 564 DALVLFKEMESS-GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Query: 147 ISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRW 206
+ G +K + A ++F+ + + ++ M+ A + F N
Sbjct: 623 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Query: 207 QISETMAAMLVVLYHEQGQVEKMEELLETI--TSYPIDSGVLSQI 249
+ ++ QG +E++++L ++ +DSG+L+ I
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 727
Score = 45.1 bits (105), Expect = 0.003
Identities = 41/201 (20%), Positives = 77/201 (37%), Gaps = 3/201 (1%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLF-EIM 95
+S LI K+ ++ + +F ME GV P + +N ++ + A L+ I
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 96 ESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKN 155
ES + TYN + K+ D L + L + +TF +I +
Sbjct: 609 ESGTQI--ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 156 YEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAM 215
+ A +F + ++PN M + Q L ++ F + DN + M
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 216 LVVLYHEQGQVEKMEELLETI 236
+V ++G++ + L I
Sbjct: 727 IVRELLQRGEITRAGTYLSMI 747
Score = 42.7 bits (99), Expect = 0.017
Identities = 40/167 (23%), Positives = 70/167 (40%), Gaps = 4/167 (2%)
Query: 22 ILEKLLKENVK-DHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACL 80
+L+ +++ + DH FS LI K V + VF+ M G+ P ++ + ++I
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 81 SSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDL 140
S + A FE M E P YN+ I + G+ +
Sbjct: 418 KSGRVEDAMLYFEQM-IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 141 QTFESVI-SGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFC 186
F S+I S C + E ++++FE M + PNV +++ G+C
Sbjct: 477 IFFNSIIDSHCKEGRVIE-SEKLFELMVRIGVKPNVITYNTLINGYC 522
Score = 42.0 bits (97), Expect = 0.028
Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 10/187 (5%)
Query: 98 SENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISG-CVNSKNY 156
++ PD TY I ++G +D A G D F ++ G C + +
Sbjct: 80 ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 139
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAML 216
+ D V M IPNV +LKG C + A E + D+R S
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 217 VVL---YHEQGQVEKMEELLETITSYPIDSGVLSQI--HCGIVTMYAMLDRLDEVELSVG 271
+ + ++G +K + +D G+L + + I+ +D+ +
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEM----LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255
Query: 272 RMLKQGM 278
M+K G+
Sbjct: 256 TMVKNGV 262
>dbj|BAD08213.1| hypothetical protein [Oryza sativa (indica cultivar-group)]
Length = 762
Score = 75.5 bits (184), Expect = 2e-12
Identities = 56/258 (21%), Positives = 122/258 (46%), Gaps = 6/258 (2%)
Query: 23 LEKLLKENVK-DHGRFSELI-FLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACL 80
L+K+ + V+ D ++ L+ +LC ++ + +F SM G++P + +L+
Sbjct: 289 LKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR-KIFDSMTKRGLEPDIATYCTLLQGYA 347
Query: 81 SSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDL 140
+ +V ++L ++M + PD H +N I A++K VD + +S + GL P++
Sbjct: 348 TKGALVEMHALLDLMVRN-GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 141 QTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKF 200
T+ +VI S + + A FE+M + PN+ + S++ C +A E
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILE 466
Query: 201 VLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPIDSGVLSQIHCGIVTMYAML 260
+LD ++ ++ + ++G+V + E+L + + + V++ + ++ Y +
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT--YSTLIDGYCLA 524
Query: 261 DRLDEVELSVGRMLKQGM 278
++DE + M GM
Sbjct: 525 GKMDEATKLLSSMFSVGM 542
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/135 (24%), Positives = 64/135 (46%), Gaps = 1/135 (0%)
Query: 64 GVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDA 123
G+ ++ FNS+I + ++ + LF++M KP+ TY+ I + +G +D
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI-GVKPNVITYSTLIDGYCLAGKMDE 529
Query: 124 MLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLK 183
S+ + G+ PD T+ ++I+G + A +F+EM S + PN+ +L+
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589
Query: 184 GFCSQKSLCRANEFF 198
G + A E +
Sbjct: 590 GLFHTRRTAAAKELY 604
Score = 53.5 bits (127), Expect = 9e-06
Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
PD +Y I+ F K G+ D + Y + PD+ T+ S+I+ + + A V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHE 222
M + ++PN S+L G+CS + A F K + + + L+ +
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313
Query: 223 QGQVEKMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGM 278
G+ + ++ +++T ++ + + +C ++ YA L E+ + M++ G+
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIAT--YCTLLQGYATKGALVEMHALLDLMVRNGI 367
Score = 53.1 bits (126), Expect = 1e-05
Identities = 42/216 (19%), Positives = 96/216 (44%), Gaps = 2/216 (0%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
+F M +GVKP + +++LI + + A L M S KPD TYN I+ +
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM-FSVGMKPDCVTYNTLINGY 556
Query: 116 SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNV 175
+ +D LA + ++G+ P++ T+ ++ G +++ A ++ + S +
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616
Query: 176 TILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLET 235
+ +L G C A F+ + Q+ +++ + G+ ++ ++L
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 676
Query: 236 ITSYPIDSGVLS-QIHCGIVTMYAMLDRLDEVELSV 270
+++ + V + + + +L+ LD++ LS+
Sbjct: 677 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 712
Score = 52.0 bits (123), Expect = 3e-05
Identities = 47/244 (19%), Positives = 100/244 (40%), Gaps = 7/244 (2%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
+S +I K + + + V T+M GV P + +NS++ SS A + M
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
S+ +PD TYN+ + K+G + + GL PD+ T+ +++ G
Sbjct: 294 -SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGAL 352
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAML 216
+ + M + + P+ + ++ + Q+ + A F + + + +
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412
Query: 217 VVLYHEQGQVEKMEELLETITSYPIDSGVLSQI--HCGIVTMYAMLDRLDEVELSVGRML 274
+ + + G V+ E + ID G+ I + ++ + D+ D+ E + ML
Sbjct: 413 IGILCKSGSVDDAMLYFEQM----IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEML 468
Query: 275 KQGM 278
+G+
Sbjct: 469 DRGI 472
Score = 52.0 bits (123), Expect = 3e-05
Identities = 36/216 (16%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 65 VKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAM 124
+ P + ++S+I+A + A + M + P+ TYN+ + + S
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN-GVMPNCMTYNSILHGYCSSEQPKEA 285
Query: 125 LAWYSAKKATGLGPDLQTFESVISG-CVNSKNYEIADRVFEEMKISEMIPNVTILESMLK 183
+ + ++ G+ PD+ T+ S++ C N ++ E A ++F+ M + P++ ++L+
Sbjct: 286 IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE-ARKIFDSMTKRGLEPDIATYCTLLQ 344
Query: 184 GFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPIDS 243
G+ ++ +L + ++ N + +L+ Y +Q +V++ + + + ++
Sbjct: 345 GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP 404
Query: 244 GVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGMS 279
V++ + ++ + +D+ L +M+ +G++
Sbjct: 405 NVVT--YGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438
Score = 43.5 bits (101), Expect = 0.010
Identities = 25/110 (22%), Positives = 50/110 (44%)
Query: 107 TYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEM 166
T+N I A K G D ++A A GL PD++T+ + + E D +F M
Sbjct: 653 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 712
Query: 167 KISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAML 216
+ + N +L S+++ + + RA + + + + + + A++L
Sbjct: 713 EENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762
Score = 40.8 bits (94), Expect = 0.063
Identities = 34/181 (18%), Positives = 69/181 (37%), Gaps = 1/181 (0%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
+F M GV P + +N ++ + A L+ + S + + TYN +
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT-QLELSTYNIILHGL 626
Query: 116 SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNV 175
K+ D L + T L + +TF +I + + A +F + + ++P+V
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 686
Query: 176 TILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLET 235
M + Q L ++ F + +N + M +V ++G + + L
Sbjct: 687 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSM 746
Query: 236 I 236
I
Sbjct: 747 I 747
Score = 40.4 bits (93), Expect = 0.082
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 3/131 (2%)
Query: 78 ACLSSHDIVTAYSLFEIMESSENYK--PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATG 135
A ++ H A S + M + K P HTY I ++G +D A G
Sbjct: 58 ADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKG 117
Query: 136 LGPDLQTFESVISG-CVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRA 194
+ TF ++ G C + + + D V M +P+V +LKG C + A
Sbjct: 118 FRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEA 177
Query: 195 NEFFKFVLDNR 205
E + D+R
Sbjct: 178 LELLHMMADDR 188
Score = 34.7 bits (78), Expect = 4.5
Identities = 29/168 (17%), Positives = 66/168 (39%), Gaps = 3/168 (1%)
Query: 40 LIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSE 99
LI C + + LG ++ G + ++ F L+ + A + +
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152
Query: 100 NYKPDFHTYNNFISAF---SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
+ PD + + ++S +L + + G PD+ ++ +VI+G +
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDN 204
+ A + EM + P+V S++ C +++ +A E ++ N
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN 260
>dbj|BAD20284.1| hypotetical protein [Oryza sativa (indica cultivar-group)]
Length = 791
Score = 75.5 bits (184), Expect = 2e-12
Identities = 56/258 (21%), Positives = 122/258 (46%), Gaps = 6/258 (2%)
Query: 23 LEKLLKENVK-DHGRFSELI-FLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACL 80
L+K+ + V+ D ++ L+ +LC ++ + +F SM G++P + +L+
Sbjct: 289 LKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR-KIFDSMTKRGLEPDIATYCTLLQGYA 347
Query: 81 SSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDL 140
+ +V ++L ++M + PD H +N I A++K VD + +S + GL P++
Sbjct: 348 TKGALVEMHALLDLMVRN-GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 141 QTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKF 200
T+ +VI S + + A FE+M + PN+ + S++ C +A E
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILE 466
Query: 201 VLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPIDSGVLSQIHCGIVTMYAML 260
+LD ++ ++ + ++G+V + E+L + + + V++ + ++ Y +
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT--YSTLIDGYCLA 524
Query: 261 DRLDEVELSVGRMLKQGM 278
++DE + M GM
Sbjct: 525 GKMDEATKLLSSMFSVGM 542
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/135 (24%), Positives = 64/135 (46%), Gaps = 1/135 (0%)
Query: 64 GVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDA 123
G+ ++ FNS+I + ++ + LF++M KP+ TY+ I + +G +D
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI-GVKPNVITYSTLIDGYCLAGKMDE 529
Query: 124 MLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLK 183
S+ + G+ PD T+ ++I+G + A +F+EM S + PN+ +L+
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589
Query: 184 GFCSQKSLCRANEFF 198
G + A E +
Sbjct: 590 GLFHTRRTAAAKELY 604
Score = 53.5 bits (127), Expect = 9e-06
Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
PD +Y I+ F K G+ D + Y + PD+ T+ S+I+ + + A V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHE 222
M + ++PN S+L G+CS + A F K + + + L+ +
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313
Query: 223 QGQVEKMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGM 278
G+ + ++ +++T ++ + + +C ++ YA L E+ + M++ G+
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIAT--YCTLLQGYATKGALVEMHALLDLMVRNGI 367
Score = 52.0 bits (123), Expect = 3e-05
Identities = 36/216 (16%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 65 VKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAM 124
+ P + ++S+I+A + A + M + P+ TYN+ + + S
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN-GVMPNCMTYNSILHGYCSSEQPKEA 285
Query: 125 LAWYSAKKATGLGPDLQTFESVISG-CVNSKNYEIADRVFEEMKISEMIPNVTILESMLK 183
+ + ++ G+ PD+ T+ S++ C N ++ E A ++F+ M + P++ ++L+
Sbjct: 286 IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE-ARKIFDSMTKRGLEPDIATYCTLLQ 344
Query: 184 GFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPIDS 243
G+ ++ +L + ++ N + +L+ Y +Q +V++ + + + ++
Sbjct: 345 GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP 404
Query: 244 GVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGMS 279
V++ + ++ + +D+ L +M+ +G++
Sbjct: 405 NVVT--YGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438
Score = 52.0 bits (123), Expect = 3e-05
Identities = 37/183 (20%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
+F M +GVKP + +++LI + + A L M S KPD TYN I+ +
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM-FSVGMKPDCVTYNTLINGY 556
Query: 116 SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNV 175
+ +D LA + ++G+ P++ T+ ++ G +++ A ++ + S +
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616
Query: 176 TILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLET 235
+ +L G C A F+ + Q+ +++ + G+ ++ ++L
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVA 676
Query: 236 ITS 238
+S
Sbjct: 677 FSS 679
Score = 52.0 bits (123), Expect = 3e-05
Identities = 47/244 (19%), Positives = 100/244 (40%), Gaps = 7/244 (2%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
+S +I K + + + V T+M GV P + +NS++ SS A + M
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
S+ +PD TYN+ + K+G + + GL PD+ T+ +++ G
Sbjct: 294 -SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGAL 352
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAML 216
+ + M + + P+ + ++ + Q+ + A F + + + +
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412
Query: 217 VVLYHEQGQVEKMEELLETITSYPIDSGVLSQI--HCGIVTMYAMLDRLDEVELSVGRML 274
+ + + G V+ E + ID G+ I + ++ + D+ D+ E + ML
Sbjct: 413 IGILCKSGSVDDAMLYFEQM----IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEML 468
Query: 275 KQGM 278
+G+
Sbjct: 469 DRGI 472
Score = 41.6 bits (96), Expect = 0.037
Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 1/181 (0%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
+F M GV P + +N ++ + A L+ + S + + TYN +
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT-QLELSTYNIILHGL 626
Query: 116 SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNV 175
K+ D L + T L + +TF +I + + A +F + ++PN
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNY 686
Query: 176 TILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLET 235
M + Q L ++ F + DN + M +V ++G++ + L
Sbjct: 687 WTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 746
Query: 236 I 236
I
Sbjct: 747 I 747
Score = 40.4 bits (93), Expect = 0.082
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 3/131 (2%)
Query: 78 ACLSSHDIVTAYSLFEIMESSENYK--PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATG 135
A ++ H A S + M + K P HTY I ++G +D A G
Sbjct: 58 ADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKG 117
Query: 136 LGPDLQTFESVISG-CVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRA 194
+ TF ++ G C + + + D V M +P+V +LKG C + A
Sbjct: 118 FRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEA 177
Query: 195 NEFFKFVLDNR 205
E + D+R
Sbjct: 178 LELLHMMADDR 188
Score = 34.7 bits (78), Expect = 4.5
Identities = 29/168 (17%), Positives = 66/168 (39%), Gaps = 3/168 (1%)
Query: 40 LIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSE 99
LI C + + LG ++ G + ++ F L+ + A + +
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152
Query: 100 NYKPDFHTYNNFISAF---SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
+ PD + + ++S +L + + G PD+ ++ +VI+G +
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDN 204
+ A + EM + P+V S++ C +++ +A E ++ N
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN 260
>gb|AAM93691.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|31432889|gb|AAP54465.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|37535752|ref|NP_922178.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 506
Score = 74.7 bits (182), Expect = 4e-12
Identities = 57/217 (26%), Positives = 102/217 (46%), Gaps = 15/217 (6%)
Query: 16 IQVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSL 75
I+ LE + ++ NV + F + + G+ + +F SM G+KP ++SL
Sbjct: 288 IKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEAR---KIFDSMVKRGLKPDITTYSSL 344
Query: 76 ISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATG 135
+ +V + LF++M S+ +PD + +N I A +K G VD + +S + G
Sbjct: 345 LHGYAIEGALVEMHGLFDLMVQSD-MQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQG 403
Query: 136 LGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRAN 195
L P+ T+ ++I+G E A +F+EM + + PN ML+G A
Sbjct: 404 LKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAK 463
Query: 196 EFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEEL 232
EF+ QI ++ L+ EQG +E++++L
Sbjct: 464 EFYV-------QIIKSGKKDLI----EQGLLEELDDL 489
Score = 52.8 bits (125), Expect = 2e-05
Identities = 36/215 (16%), Positives = 93/215 (42%), Gaps = 3/215 (1%)
Query: 65 VKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAM 124
+ P ++++S+I+A + A + + M + P+ TY + + F SG +
Sbjct: 229 ILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKN-GVTPNCFTYTSLVHGFCSSGQLTEA 287
Query: 125 LAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKG 184
+ + + G+ P++ T+ S + + A ++F+ M + P++T S+L G
Sbjct: 288 IKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHG 347
Query: 185 FCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPIDSG 244
+ + +L + F ++ + Q + L+ +QG+V++ + + +
Sbjct: 348 YAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPN 407
Query: 245 VLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGMS 279
++ + ++ Y + R++ M+ G+S
Sbjct: 408 CVT--YSTLINGYCKITRMENALALFQEMVSNGVS 440
Score = 41.6 bits (96), Expect = 0.037
Identities = 25/102 (24%), Positives = 45/102 (43%)
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
P+ +Y+ I K G+ D A Y + P++ + S+I+ + + A V
Sbjct: 196 PNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEV 255
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDN 204
+ M + + PN S++ GFCS L A +F + + N
Sbjct: 256 HDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSN 297
Score = 34.7 bits (78), Expect = 4.5
Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISG-CVNSKNYEIADR 161
P HTY I +G +D A G + F ++ G C + + + D
Sbjct: 88 PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDI 147
Query: 162 VFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDN 204
V M +PNV +LKG C + A E + D+
Sbjct: 148 VLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADD 190
>gb|AAD56322.1| hypothetical protein [Arabidopsis thaliana]
gi|15232008|ref|NP_187518.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 74.7 bits (182), Expect = 4e-12
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Query: 19 LEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISA 78
L+W+ ++ K +V + + GKL + + +F M GV P +N LI
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA---LELFDEMSERGVAPDVTCYNILIDG 228
Query: 79 CLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGP 138
L D TA L++ + + P+ T+N IS SK G VD L + K
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 139 DLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFF 198
DL T+ S+I G ++ N + A+ VF E+ + +V +ML GFC + + E +
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 199 KFVLDNRWQISETMAAMLVVLYHEQGQVEK 228
+ +++++ ++ +L+ E G++++
Sbjct: 349 R-IMEHKNSVNIVSYNILIKGLLENGKIDE 377
Score = 56.6 bits (135), Expect = 1e-06
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 2 LLRFIIEILIINILIQVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSME 61
+LR + E ++N + +++E I + K D +I GK ++VF M
Sbjct: 49 ILRRLSETRMVNHVSRIVELIRSQECK---CDEDVALSVIKTYGKNSMPDQALDVFKRMR 105
Query: 62 GV-GVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGN 120
+ G +P +N+L++A + + V SLF E++ P+ TYN I K
Sbjct: 106 EIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKE 164
Query: 121 VDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILES 180
+ + G PD+ ++ +VI+ + + A +F+EM + P+VT
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNI 224
Query: 181 MLKGFCSQKSLCRANEFFKFVLDN 204
++ GF +K A E + +L++
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLED 248
Score = 45.1 bits (105), Expect = 0.003
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
++ +I K K ++ N+ M GV+ S V N+LI + D + F + E
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI--RDSRLGEASFFLRE 489
Query: 97 SSEN-YKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKN 155
+N +P +YN I K+G A+ G PDL+T+ ++ G +
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 156 YEIADRVFEEMKISEMIPNVTILESMLKGFCS 187
++A ++ + S + +V + ++ G CS
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCS 581
Score = 39.7 bits (91), Expect = 0.14
Identities = 35/156 (22%), Positives = 63/156 (39%), Gaps = 5/156 (3%)
Query: 44 CGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKP 103
CGK+K + V + + +N LI L + I A ++ +M + + Y
Sbjct: 338 CGKIKESLELWRIMEHKNSVNI----VSYNILIKGLLENGKIDEATMIWRLMPA-KGYAA 392
Query: 104 DFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVF 163
D TY FI +G V+ L +++G D+ + S+I K E A +
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 164 EEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFK 199
+EM + N + +++ G L A+ F +
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Score = 39.3 bits (90), Expect = 0.18
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 41 IFLCGKLKN--VQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESS 98
I LCG ++ + L + ++ G++ ++ N LI S + A ++ ME
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH- 597
Query: 99 ENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEI 158
N + TYN + F K G+ + + GL PD+ ++ +++ G +
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 159 ADRVFEEMKISEMIPNV 175
A F++ + + P V
Sbjct: 658 AMEFFDDARNHGIFPTV 674
Score = 37.7 bits (86), Expect = 0.53
Identities = 33/144 (22%), Positives = 60/144 (40%), Gaps = 5/144 (3%)
Query: 45 GKLKNVQLGINVF--TSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSEN-Y 101
G +++ +LG F M G +PT + +N LI + A + + E EN +
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAF--VKEMLENGW 530
Query: 102 KPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADR 161
KPD TY+ + + +D L + +GL D+ +I G + + A
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 162 VFEEMKISEMIPNVTILESMLKGF 185
V M+ N+ ++++GF
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGF 614
>ref|NP_909693.1| putative pentatricopeptide repeat protein [Oryza sativa (japonica
cultivar-group)] gi|28875991|gb|AAO60000.1| putative
pentatricopeptide repeat protein [Oryza sativa (japonica
cultivar-group)]
Length = 742
Score = 74.7 bits (182), Expect = 4e-12
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 2/243 (0%)
Query: 6 IIEILIINILIQVLEWILEKLLKEN-VKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVG 64
++ L N ++ + IL +++ + D F+ LI ++ +++ + G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 65 VKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAM 124
V P FN LI+A D A LFE M++S PD TYN I G +
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNS-GCTPDEVTYNTLIDNLCSLGKLGKA 445
Query: 125 LAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKG 184
L ++TG T+ ++I G E A+ VF++M + + N +++ G
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505
Query: 185 FCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETITSYPIDSG 244
C K + A E ++ Q + ++ Y +QG ++K ++LET+T+ +
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565
Query: 245 VLS 247
V++
Sbjct: 566 VVT 568
Score = 57.0 bits (136), Expect = 8e-07
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 43 LCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYK 102
LC K++ ++ VF M+ G+ ++ FN+LI I A+ L M SE +
Sbjct: 471 LCKKMR-IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM-ISEGLQ 528
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
P+ TYN+ ++ + K G++ A G D+ T+ ++I+G + ++A +V
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFK 199
M+I M P +L+ + ++ A F+
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625
Score = 56.2 bits (134), Expect = 1e-06
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 1/205 (0%)
Query: 13 NILIQVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVF 72
N L + L+ + +K D F+ LI K+ + L + +F M+ G P + +
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429
Query: 73 NSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKK 132
N+LI S + A L + MES+ + TYN I K ++ +
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI-TYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 133 ATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLC 192
G+ + TF ++I G K + A + +M + PN S+L +C Q +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 193 RANEFFKFVLDNRWQISETMAAMLV 217
+A + + + N +++ L+
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLI 573
Score = 51.6 bits (122), Expect = 4e-05
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 4/199 (2%)
Query: 6 IIEILIINILIQVLEWILEKLLKENVKDHG-RFSELIFLCGKLKNVQLGINVFTSMEGVG 64
II+ L + I+ E + +++ + + + F+ LI K K + + M G
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Query: 65 VKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAM 124
++P ++ +NS+++ DI A + E M ++ ++ D TY I+ K+G
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETM-TANGFEVDVVTYGTLINGLCKAGRTQVA 585
Query: 125 LAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKG 184
L + G+ P + + V+ N A +F EM P+ + + +G
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 645
Query: 185 FCSQKSLCRANEFFKFVLD 203
C + E F F+L+
Sbjct: 646 LCRGGGPIK--EAFDFMLE 662
Score = 50.4 bits (119), Expect = 8e-05
Identities = 42/195 (21%), Positives = 79/195 (39%), Gaps = 5/195 (2%)
Query: 55 NVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISA 114
+V++ M G+KP + FN+L+ A +H + TA + E M SS PD T+ +
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM-SSRGVAPDETTFTTLMQG 225
Query: 115 FSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPN 174
F + G+++A L + G T +I+G E A ++ P+
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285
Query: 175 VTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLE 234
+ + G C + A + ++ ++V + GQ+E+ + +L
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345
Query: 235 TITSYPIDSGVLSQI 249
+ +D G L I
Sbjct: 346 QM----VDRGCLPDI 356
Score = 48.9 bits (115), Expect = 2e-04
Identities = 44/234 (18%), Positives = 94/234 (39%), Gaps = 3/234 (1%)
Query: 46 KLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDF 105
KL V+ + G +P + +N+ ++ + + A + ++M E + PD
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ-EGHDPDV 321
Query: 106 HTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEE 165
TYN ++ K+G ++ + G PD+ TF ++I+ E A + +
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381
Query: 166 MKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQ 225
+ + + P+V ++ C A F+ + ++ E L+ G+
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 226 VEKMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLKQGMS 279
+ K +LL+ + S ++ + I+ R++E E +M QG+S
Sbjct: 442 LGKALDLLKDMESTGCPRSTIT--YNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493
Score = 46.6 bits (109), Expect = 0.001
Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 49 NVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTY 108
+++ + V M +G T + N LI+ + A + E ++ ++PD TY
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ-QEIADGFEPDQITY 289
Query: 109 NNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKI 168
N F++ ++ +V L G PD+ T+ V++ + E A + +M
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVD 349
Query: 169 SEMIPNVTILESMLKGFCSQKSL 191
+P++T +++ C+ L
Sbjct: 350 RGCLPDITTFNTLIAALCTGNRL 372
Score = 45.1 bits (105), Expect = 0.003
Identities = 27/123 (21%), Positives = 54/123 (42%), Gaps = 1/123 (0%)
Query: 64 GVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDA 123
G++ ++V+N L++ + + S++ M + KPD T+N + A ++ V
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEM-GARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 124 MLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLK 183
+ + G+ PD TF +++ G V + E A RV M + ++
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259
Query: 184 GFC 186
G+C
Sbjct: 260 GYC 262
Score = 43.1 bits (100), Expect = 0.013
Identities = 27/124 (21%), Positives = 57/124 (45%)
Query: 104 DFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVF 163
D YN+ ++ + + + + YS A G+ PD+ TF +++ + A +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204
Query: 164 EEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQ 223
EEM + P+ T ++++GF + S+ A +L+ ++ +L+ Y +
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264
Query: 224 GQVE 227
G+VE
Sbjct: 265 GRVE 268
>gb|AAF19704.1| F2K11.22 [Arabidopsis thaliana] gi|15222409|ref|NP_176529.1|
pentatricopeptide (PPR) repeat-containing protein
[Arabidopsis thaliana] gi|25404905|pir||H96659 protein
F2K11.22 [imported] - Arabidopsis thaliana
Length = 577
Score = 74.7 bits (182), Expect = 4e-12
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYS--LFEI 94
+S +I K ++ +N+FT ME GV+P + ++SLIS CL +++ + S L ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS-CLCNYERWSDASRLLSDM 321
Query: 95 MESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSK 154
+E N P+ T+N I AF K G + Y + PD+ T+ S+I+G
Sbjct: 322 IERKIN--PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 155 NYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAA 214
+ A +FE M + PNV +++ GFC K + E F+ + R + T+
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR-EMSQRGLVGNTVT- 437
Query: 215 MLVVLYHEQGQVEKMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRL 263
L H Q + + + + GV H I+T +LD L
Sbjct: 438 -YTTLIHGFFQARDCDN-AQMVFKQMVSDGV----HPNIMTYNTLLDGL 480
Score = 61.2 bits (147), Expect = 4e-08
Identities = 42/185 (22%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 17 QVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLI 76
++L ++E+ + NV + GKL + ++ M + P ++SLI
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE---KLYDEMIKRSIDPDIFTYSSLI 372
Query: 77 SACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGL 136
+ + A +FE+M S + + P+ TYN I+ F K+ +D + + GL
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 137 GPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANE 196
+ T+ ++I G +++ + A VF++M + PN+ ++L G C L +A
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 197 FFKFV 201
F+++
Sbjct: 492 VFEYL 496
Score = 59.7 bits (143), Expect = 1e-07
Identities = 41/220 (18%), Positives = 98/220 (43%), Gaps = 3/220 (1%)
Query: 48 KNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHT 107
K + + + M +G +P ++ F +LI + A +L + M +P+ T
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVT 227
Query: 108 YNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMK 167
Y ++ K G++D + +A + ++ + +VI ++ + A +F EM+
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 168 ISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVE 227
+ PNV S++ C+ + A+ +++ + + L+ + ++G++
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 228 KMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVE 267
+ E+L + + ID + + + ++ + M DRLDE +
Sbjct: 348 EAEKLYDEMIKRSIDPDIFT--YSSLINGFCMHDRLDEAK 385
Score = 59.3 bits (142), Expect = 2e-07
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 46 KLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDF 105
K K + G+ +F M G+ ++ + +LI + D A +F+ M S + P+
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-DGVHPNI 470
Query: 106 HTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEE 165
TYN + K+G ++ + + + + + P + T+ +I G + E +F
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 166 MKISEMIPNVTILESMLKGFCSQKSLCRANEFFK 199
+ + + P+V I +M+ GFC + A+ F+
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Score = 54.3 bits (129), Expect = 5e-06
Identities = 32/119 (26%), Positives = 58/119 (47%), Gaps = 1/119 (0%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
VF M GV P + +N+L+ + + A +FE ++ S+ +P +TYN I
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGM 515
Query: 116 SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPN 174
K+G V+ + + G+ PD+ + ++ISG E AD +F +M+ +P+
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 41.6 bits (96), Expect = 0.037
Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 1/152 (0%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
F++L+ K+K L I++ M+ +G+ +N LI+ I A +L M
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
Y+P T ++ ++ + + +A G PD TF ++I G
Sbjct: 148 KL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQ 188
A + + M PN+ ++ G C +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Score = 36.6 bits (83), Expect = 1.2
Identities = 27/123 (21%), Positives = 51/123 (40%), Gaps = 1/123 (0%)
Query: 72 FNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAK 131
+ ++ L S + A LF M S P +N +SA +K D +++
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 132 KATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSL 191
+ G+ +L T+ +I+ +A + +M P++ L S+L G+C K +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 192 CRA 194
A
Sbjct: 172 SDA 174
Score = 35.0 bits (79), Expect = 3.4
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 45 GKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPD 104
GKL+ + VF ++ ++PT +N +I + + + LF + S + KPD
Sbjct: 484 GKLEKAMV---VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPD 539
Query: 105 FHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQT 142
YN IS F + G + A + + G PD T
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>gb|AAF75803.1| Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats. [Arabidopsis thaliana]
gi|25404380|pir||H96653 hypothetical protein F16P17.7
[imported] - Arabidopsis thaliana
Length = 613
Score = 74.7 bits (182), Expect = 4e-12
Identities = 52/181 (28%), Positives = 90/181 (48%), Gaps = 6/181 (3%)
Query: 22 ILEKLLKENVK-DHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACL 80
+L+K+ K ++ D ++ +I KNV +N+FT M+ G++P + +NSLI CL
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CL 284
Query: 81 SSHDIVTAYS--LFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGP 138
++ + S L +++E N P+ T++ I AF K G + Y + P
Sbjct: 285 CNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342
Query: 139 DLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFF 198
D+ T+ S+I+G + A +FE M + PNV +++KGFC K + E F
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 402
Query: 199 K 199
+
Sbjct: 403 R 403
Score = 68.9 bits (167), Expect = 2e-10
Identities = 45/220 (20%), Positives = 99/220 (44%), Gaps = 3/220 (1%)
Query: 48 KNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHT 107
K + + + M + +P ++ FN+LI + A +L + M + +PD T
Sbjct: 148 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA-RGCQPDLFT 206
Query: 108 YNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMK 167
Y ++ K G++D L+ + + D+ + ++I N KN A +F EM
Sbjct: 207 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 266
Query: 168 ISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVE 227
+ PNV S+++ C+ A+ +++ + + + L+ + ++G++
Sbjct: 267 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 326
Query: 228 KMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVE 267
+ E+L + + ID + + + ++ + M DRLDE +
Sbjct: 327 EAEKLYDEMIKRSIDPDIFT--YSSLINGFCMHDRLDEAK 364
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Query: 46 KLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDF 105
K K V+ G+ +F M G+ ++ +N+LI + D A +F+ M S + PD
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPDI 449
Query: 106 HTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEE 165
TY+ + K G ++ L + + + + PD+ T+ +I G + E +F
Sbjct: 450 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 509
Query: 166 MKISEMIPNVTILESMLKGFCSQKSLCRANEFFK 199
+ + + PNV I +M+ GFC + A+ F+
Sbjct: 510 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 543
Score = 58.2 bits (139), Expect = 4e-07
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 56 VFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
+F M GV P + ++ L+ + A +FE ++ S+ +PD +TYN I
Sbjct: 436 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMIEGM 494
Query: 116 SKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNV 175
K+G V+ + + G+ P++ + ++ISG E AD +F EMK +PN
Sbjct: 495 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 554
Query: 176 TILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEK 228
++++ + E K + + + +M++ + H+ G++EK
Sbjct: 555 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD-GRLEK 606
Score = 58.2 bits (139), Expect = 4e-07
Identities = 40/191 (20%), Positives = 87/191 (44%), Gaps = 4/191 (2%)
Query: 17 QVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLI 76
++L ++E+ + NV + GKL + ++ M + P ++SLI
Sbjct: 295 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE---KLYDEMIKRSIDPDIFTYSSLI 351
Query: 77 SACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGL 136
+ + A +FE+M S + + P+ TYN I F K+ V+ + + GL
Sbjct: 352 NGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410
Query: 137 GPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANE 196
+ T+ ++I G + + ++A ++F++M + P++ +L G C L +A
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 470
Query: 197 FFKFVLDNRWQ 207
F+++ ++ +
Sbjct: 471 VFEYLQKSKME 481
Score = 48.5 bits (114), Expect = 3e-04
Identities = 32/131 (24%), Positives = 58/131 (43%), Gaps = 1/131 (0%)
Query: 54 INVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFIS 113
+++F M P+ + FN L+SA + SL E M++ D ++YN I+
Sbjct: 49 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYNILIN 107
Query: 114 AFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIP 173
F + + LA G PD+ T S+++G + K A + ++M + E P
Sbjct: 108 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 167
Query: 174 NVTILESMLKG 184
N +++ G
Sbjct: 168 NTVTFNTLIHG 178
Score = 33.9 bits (76), Expect = 7.7
Identities = 20/92 (21%), Positives = 39/92 (41%)
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
P +N +SA +K D +++ + + DL ++ +I+ +A V
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRA 194
+M P++ L S+L G+C K + A
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 153
>ref|NP_176481.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 659
Score = 74.7 bits (182), Expect = 4e-12
Identities = 52/181 (28%), Positives = 90/181 (48%), Gaps = 6/181 (3%)
Query: 22 ILEKLLKENVK-DHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACL 80
+L+K+ K ++ D ++ +I KNV +N+FT M+ G++P + +NSLI CL
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CL 300
Query: 81 SSHDIVTAYS--LFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGP 138
++ + S L +++E N P+ T++ I AF K G + Y + P
Sbjct: 301 CNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 139 DLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFF 198
D+ T+ S+I+G + A +FE M + PNV +++KGFC K + E F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 199 K 199
+
Sbjct: 419 R 419
Score = 68.9 bits (167), Expect = 2e-10
Identities = 45/220 (20%), Positives = 99/220 (44%), Gaps = 3/220 (1%)
Query: 48 KNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHT 107
K + + + M + +P ++ FN+LI + A +L + M + +PD T
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA-RGCQPDLFT 222
Query: 108 YNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMK 167
Y ++ K G++D L+ + + D+ + ++I N KN A +F EM
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 168 ISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVE 227
+ PNV S+++ C+ A+ +++ + + + L+ + ++G++
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 228 KMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVE 267
+ E+L + + ID + + + ++ + M DRLDE +
Sbjct: 343 EAEKLYDEMIKRSIDPDIFT--YSSLINGFCMHDRLDEAK 380
Score = 65.1 bits (157), Expect = 3e-09
Identities = 48/219 (21%), Positives = 97/219 (43%), Gaps = 3/219 (1%)
Query: 46 KLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDF 105
K K V+ G+ +F M G+ ++ +N+LI + D A +F+ M S + PD
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPDI 465
Query: 106 HTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEE 165
TY+ + K G ++ L + + + + PD+ T+ +I G + E +F
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 166 MKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQ 225
+ + + PNV I +M+ GFC + A+ F+ + ++ + L+ G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 226 VEKMEELLETITS--YPIDSGVLSQIHCGIVTMYAMLDR 262
EL++ + S + D+ +S + V ++L++
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMLSGNAVLKQSILEK 624
Score = 58.2 bits (139), Expect = 4e-07
Identities = 40/191 (20%), Positives = 87/191 (44%), Gaps = 4/191 (2%)
Query: 17 QVLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLI 76
++L ++E+ + NV + GKL + ++ M + P ++SLI
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE---KLYDEMIKRSIDPDIFTYSSLI 367
Query: 77 SACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGL 136
+ + A +FE+M S + + P+ TYN I F K+ V+ + + GL
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 137 GPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANE 196
+ T+ ++I G + + ++A ++F++M + P++ +L G C L +A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 197 FFKFVLDNRWQ 207
F+++ ++ +
Sbjct: 487 VFEYLQKSKME 497
Score = 48.5 bits (114), Expect = 3e-04
Identities = 32/131 (24%), Positives = 58/131 (43%), Gaps = 1/131 (0%)
Query: 54 INVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFIS 113
+++F M P+ + FN L+SA + SL E M++ D ++YN I+
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYNILIN 123
Query: 114 AFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIP 173
F + + LA G PD+ T S+++G + K A + ++M + E P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 174 NVTILESMLKG 184
N +++ G
Sbjct: 184 NTVTFNTLIHG 194
Score = 33.9 bits (76), Expect = 7.7
Identities = 20/92 (21%), Positives = 39/92 (41%)
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
P +N +SA +K D +++ + + DL ++ +I+ +A V
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRA 194
+M P++ L S+L G+C K + A
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
>emb|CAB86023.1| putative protein [Arabidopsis thaliana] gi|11358102|pir||T48477
hypothetical protein T1E3.170 - Arabidopsis thaliana
(fragment)
Length = 880
Score = 74.3 bits (181), Expect = 5e-12
Identities = 46/158 (29%), Positives = 76/158 (47%), Gaps = 1/158 (0%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
+ L+ C K +Q + V M + S V+N LI D+ A L + M+
Sbjct: 694 YEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK 753
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
E KPD HTY +FISA SK+G+++ +A G+ P+++T+ ++I G +
Sbjct: 754 K-EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 812
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRA 194
E A +EEMK + P+ + +L S+ S+ A
Sbjct: 813 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 850
Score = 56.2 bits (134), Expect = 1e-06
Identities = 47/239 (19%), Positives = 106/239 (43%), Gaps = 11/239 (4%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
+ ++I+ + N++ + ME G+ ++++++ D +F+ ++
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
+ P TY I+ ++K G + L K G+ +L+T+ +I+G V K++
Sbjct: 477 EC-GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDW 535
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAML 216
A VFE+M M P+V + +++ FC ++ RA + K + R + + +
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPI 595
Query: 217 VVLYHEQGQVEKMEELLETITSYPIDSGVLSQIHC------GIVTMYAMLDRLDEVELS 269
+ Y + G + + E+ + + G + +H G+V ++ LDE+ L+
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRR----CGCVPTVHTFNGLINGLVEKRQAVEILDEMTLA 650
Score = 55.5 bits (132), Expect = 2e-06
Identities = 43/196 (21%), Positives = 82/196 (40%), Gaps = 1/196 (0%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
F ++ G+ ++ F M G+ PTS ++ SLI A D+ A S M+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
E + TY+ + FSK+G+ +A W+ K + + +I + N
Sbjct: 372 E-EGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAML 216
E A+ + EM+ + + I +M+ G+ + FK + + + + L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 217 VVLYHEQGQVEKMEEL 232
+ LY + G++ K E+
Sbjct: 491 INLYTKVGKISKALEV 506
Score = 50.1 bits (118), Expect = 1e-04
Identities = 34/163 (20%), Positives = 66/163 (39%), Gaps = 4/163 (2%)
Query: 37 FSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIME 96
F +I K +++ + VF M G PT FN LI+ + V +
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAG 651
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNY 156
S N HTY + ++ G+ +++ + GL D+ T+E+++ C S
Sbjct: 652 VSANE----HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 707
Query: 157 EIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFK 199
+ A V +EM + N + ++ G+ + + A + +
Sbjct: 708 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 750
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.137 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,254,495
Number of Sequences: 2540612
Number of extensions: 16793655
Number of successful extensions: 53370
Number of sequences better than 10.0: 1104
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 414
Number of HSP's that attempted gapping in prelim test: 45615
Number of HSP's gapped (non-prelim): 4956
length of query: 356
length of database: 863,360,394
effective HSP length: 129
effective length of query: 227
effective length of database: 535,621,446
effective search space: 121586068242
effective search space used: 121586068242
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)
Medicago: description of AC148532.2