BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148532.15 + phase: 1 /partial
(178 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB87707.1| putative protein [Arabidopsis thaliana] gi|15239... 173 2e-42
ref|NP_917625.1| P0410E03.16 [Oryza sativa (japonica cultivar-gr... 166 2e-40
dbj|BAD52530.1| unknown protein [Oryza sativa (japonica cultivar... 166 2e-40
ref|NP_188181.1| hypothetical protein [Arabidopsis thaliana] 105 7e-22
ref|XP_625055.1| PREDICTED: similar to ENSANGP00000004174 [Apis ... 44 0.002
pir||E84644 hypothetical protein At2g25120 [imported] - Arabidop... 44 0.003
emb|CAA97057.1| unnamed protein product [Saccharomyces cerevisia... 42 0.006
ref|XP_540480.1| PREDICTED: similar to Hypothetical protein B930... 40 0.022
ref|NP_013461.1| One of 15 subunits of the 'Remodel the Structur... 40 0.022
gb|AAH57623.1| BC060615 protein [Mus musculus] 40 0.029
ref|NP_940815.2| hypothetical protein LOC268515 [Mus musculus] g... 40 0.029
ref|XP_340948.2| PREDICTED: similar to Hypothetical protein B930... 40 0.029
gb|AAH60615.1| BC060615 protein [Mus musculus] 40 0.029
gb|AAH44873.1| BC060615 protein [Mus musculus] 40 0.029
ref|XP_310389.2| ENSANGP00000005615 [Anopheles gambiae str. PEST... 40 0.038
emb|CAG81276.1| unnamed protein product [Yarrowia lipolytica CLI... 40 0.038
ref|XP_591789.1| PREDICTED: similar to BC060615 protein, partial... 40 0.038
emb|CAG85771.1| unnamed protein product [Debaryomyces hansenii C... 39 0.050
emb|CAB79267.1| putative protein [Arabidopsis thaliana] gi|32928... 39 0.050
emb|CAA19283.1| SPBC4B4.03 [Schizosaccharomyces pombe] gi|191132... 39 0.050
>emb|CAB87707.1| putative protein [Arabidopsis thaliana]
gi|15239055|ref|NP_196708.1| bromo-adjacent homology
(BAH) domain-containing protein [Arabidopsis thaliana]
gi|11281140|pir||T48506 hypothetical protein F15N18.60 -
Arabidopsis thaliana
Length = 691
Score = 173 bits (438), Expect = 2e-42
Identities = 90/174 (51%), Positives = 119/174 (67%), Gaps = 7/174 (4%)
Query: 9 SPESETLEFKWGQKRGKGGKKRDIQFYQSFTLRGVDYSLFDNVYVKN----DFAEPRIGK 64
S SE LEFKWG+K+G GGKK+D+QFY+SFT G +Y L+D V V N D EP IG
Sbjct: 4 SVASEGLEFKWGKKKGVGGKKKDVQFYESFTYDGDEYRLYDCVLVGNASEPDSTEPFIGM 63
Query: 65 IIKIWETPT--LERKIKVQWFFRPIEVSKCLTWI-KIYFNELFFACGDGDGLATIHPLES 121
IIKIWE + +K+K+ WFF+P E++ L + + NE+F A G+G GLA + LE+
Sbjct: 64 IIKIWEHANKHIPKKVKLLWFFKPSEIAPYLEGVPNVLANEVFLASGEGLGLANTNQLEA 123
Query: 122 IAGKCNIVCISKDSRNPQLSDKVTWSAAFVFYRYFDVGQRKIVEEVDDKSIGIE 175
I GKC+++CISKD RNPQ SD+ SA FVF R FDVG K+V+ +DDK G++
Sbjct: 124 IGGKCSVLCISKDKRNPQPSDEKFNSADFVFCRAFDVGSCKVVDTIDDKIAGVD 177
>ref|NP_917625.1| P0410E03.16 [Oryza sativa (japonica cultivar-group)]
Length = 507
Score = 166 bits (421), Expect = 2e-40
Identities = 83/166 (50%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
Query: 12 SETLEFKWGQKRGKGGKKRDIQFYQSFTLRGVDYSLFDNVYV-KNDFAEPRIGKIIKIWE 70
+E ++F WG+KR KGG K D QFY SFT V YSL+DNVY+ K+ +EP IGKIIKIW+
Sbjct: 5 NENIQFSWGKKRAKGGIKMDTQFYDSFTFDNVKYSLYDNVYLFKSGESEPYIGKIIKIWQ 64
Query: 71 TPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCNIVC 130
+K+K+ WFF P E+ K L+ + E+F ACG+G GLA I+PLE+I GKC ++C
Sbjct: 65 Q-NQAKKVKILWFFLPDEIRKHLSG-PVMEKEIFLACGEGVGLADINPLEAIGGKCTVLC 122
Query: 131 ISKDSRNPQLSDKVTWSAAFVFYRYFDVGQRKIVEEVDDKSIGIEG 176
ISKD RN Q S + A ++FYR+FDV + E++ +K G+EG
Sbjct: 123 ISKDERNRQPSPRELAMADYIFYRFFDVNSCTLSEQLPEKIAGVEG 168
>dbj|BAD52530.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 501
Score = 166 bits (421), Expect = 2e-40
Identities = 83/166 (50%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
Query: 12 SETLEFKWGQKRGKGGKKRDIQFYQSFTLRGVDYSLFDNVYV-KNDFAEPRIGKIIKIWE 70
+E ++F WG+KR KGG K D QFY SFT V YSL+DNVY+ K+ +EP IGKIIKIW+
Sbjct: 5 NENIQFSWGKKRAKGGIKMDTQFYDSFTFDNVKYSLYDNVYLFKSGESEPYIGKIIKIWQ 64
Query: 71 TPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCNIVC 130
+K+K+ WFF P E+ K L+ + E+F ACG+G GLA I+PLE+I GKC ++C
Sbjct: 65 Q-NQAKKVKILWFFLPDEIRKHLSG-PVMEKEIFLACGEGVGLADINPLEAIGGKCTVLC 122
Query: 131 ISKDSRNPQLSDKVTWSAAFVFYRYFDVGQRKIVEEVDDKSIGIEG 176
ISKD RN Q S + A ++FYR+FDV + E++ +K G+EG
Sbjct: 123 ISKDERNRQPSPRELAMADYIFYRFFDVNSCTLSEQLPEKIAGVEG 168
>ref|NP_188181.1| hypothetical protein [Arabidopsis thaliana]
Length = 543
Score = 105 bits (261), Expect = 7e-22
Identities = 63/163 (38%), Positives = 87/163 (52%), Gaps = 24/163 (14%)
Query: 16 EFKWGQKRGKGGKKRDIQFYQSFTLRGVDYSLFDNVYVK-NDFAEPRIGKIIKIWETPTL 74
+FKWG KRG G K ++FY+SFTL G++Y LFD Y + +E IGK++ T
Sbjct: 56 DFKWGAKRGVGRKDNKVRFYESFTLEGIEYRLFDCAYFYVHGQSETSIGKLVTF--TRHQ 113
Query: 75 ER---KIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCNIVCI 131
+R + + QW +ELF ACGD G++ I+ +E+I GKCN+VC
Sbjct: 114 QRFLGEYEPQW------------------DELFLACGDEKGVSNINDVETIMGKCNVVCT 155
Query: 132 SKDSRNPQLSDKVTWSAAFVFYRYFDVGQRKIVEEVDDKSIGI 174
S D RNP+ K A ++F R FD R I E+ D GI
Sbjct: 156 SDDRRNPRPGTKELRRAKYIFSRTFDTRLRIISEDFADAIAGI 198
>ref|XP_625055.1| PREDICTED: similar to ENSANGP00000004174 [Apis mellifera]
Length = 1622
Score = 44.3 bits (103), Expect = 0.002
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 34 FYQSFTLRGVDYSLFDNVYVKNDFAEPRIGKIIKIWETPTLERKIKVQWFFRPIEVSKCL 93
+Y+ + D VYV D +I +I IW T + K W P EV
Sbjct: 1101 YYEQYNTCAGSVKTGDFVYVATDGGRQQIAQIDAIWSTKDGKCYFKGPWLLMPAEVPHTP 1160
Query: 94 TWIKIYFNELFFACGDGDGLATIHPLESIAGKCNIV 129
T + Y ELF + DG HP+ +I GKC ++
Sbjct: 1161 TKL-FYKQELFLSTVDG-----THPIVAIVGKCAVL 1190
>pir||E84644 hypothetical protein At2g25120 [imported] - Arabidopsis thaliana
gi|15224682|ref|NP_180084.1| bromo-adjacent homology
(BAH) domain-containing protein [Arabidopsis thaliana]
Length = 380
Score = 43.5 bits (101), Expect = 0.003
Identities = 43/156 (27%), Positives = 71/156 (44%), Gaps = 17/156 (10%)
Query: 24 GKGGKKRDIQFYQSFTLRGVDYSLFDNV-YVKNDFAEPRIGKIIKIWETPTLER--KIKV 80
GKG KK+ +++FT RG Y+L D+V V +D IIK P E+ K+ V
Sbjct: 77 GKGKKKKS--HFKTFTFRGNQYALEDSVQLVPDDPNSKPYCAIIKDIYIPNKEKYVKLAV 134
Query: 81 QWFFRPIEVSK--CLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCNIVCISKDSRNP 138
WF+RP +V K W LF++ + A ES+ KC + + ++ + P
Sbjct: 135 HWFYRPEDVDKKHVGKWESKDSRNLFYSFHRDEVFA-----ESVKHKCVVNFVPENKQIP 189
Query: 139 QLSDKVTWSAAFVFYRYFDVGQRKIVEEVDDKSIGI 174
+ F+ +D ++K V + DK+ +
Sbjct: 190 NRRE----HPCFIVQNVYDFVKKK-VRKFTDKNFDV 220
>emb|CAA97057.1| unnamed protein product [Saccharomyces cerevisiae]
gi|6321493|ref|NP_011570.1| One of 15 subunits of the
'Remodel the Structure of Chromatin' (RSC) complex;
required for expression of mid-late sporulation-specific
genes; contains two essential bromodomains, a
bromo-adjacent homology (BAH) domain, and an AT hook;
Rsc1p [Saccharomyces cerevisiae]
gi|1723670|sp|P53236|RSC1_YEAST Chromatin structure
remodeling complex protein RSC1 (Remodel the structure
of chromatin complex subunit RSC1)
Length = 928
Score = 42.4 bits (98), Expect = 0.006
Identities = 27/101 (26%), Positives = 46/101 (44%), Gaps = 7/101 (6%)
Query: 55 NDFAEPRIGKIIKIWETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLA 114
ND +P +G+I ++W T + + W+FRP + + + Y NE+ G
Sbjct: 382 NDINKPIVGQIFRLWSTTDGNKWLNACWYFRPEQTVHRVDRL-FYKNEVM-----KTGQY 435
Query: 115 TIHPLESIAGKCNIVCISKDSRNPQLSDKVTWSAAFVFYRY 155
HP++ I GKC ++ ++ R S KV +RY
Sbjct: 436 RDHPIQDIKGKCYVIHFTRFQRGDP-STKVNGPQFVCEFRY 475
>ref|XP_540480.1| PREDICTED: similar to Hypothetical protein B930044J06 [Canis
familiaris]
Length = 2666
Score = 40.4 bits (93), Expect = 0.022
Identities = 36/122 (29%), Positives = 61/122 (49%), Gaps = 19/122 (15%)
Query: 17 FKWG----QKRGKGGKKRDIQFYQSF-----TLRGVDYSLFDNVYVKNDFAEPRIGKIIK 67
+KW Q+RG GK R + FY++ TLR D ++F + N P IG+I
Sbjct: 2511 WKWSGNPTQRRGMKGKARKL-FYKAIVRGKETLRIGDCAVFLSAGRPN---LPYIGRIES 2566
Query: 68 IWETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCN 127
+WE+ +KV+WF+ P E +K N L+ +C + + + +++I+ KC
Sbjct: 2567 MWESWASNMVVKVKWFYHP-EETKLGKRQSDGKNALYQSCHEDE-----NDVQTISHKCQ 2620
Query: 128 IV 129
+V
Sbjct: 2621 VV 2622
>ref|NP_013461.1| One of 15 subunits of the 'Remodel the Structure of Chromatin'
(RSC) complex; required for expression of mid-late
sporulation-specific genes; contains two essential
bromodomains, a bromo-adjacent homology (BAH) domain,
and an AT hook; Rsc2p [Saccharomyces cerevisiae]
gi|12230583|sp|Q06488|RSC2_YEAST Chromatin structure
remodeling complex protein RSC2 (Remodel the structure
of chromatin complex subunit RSC2)
gi|609397|gb|AAB67747.1| Ylr357wp [Saccharomyces
cerevisiae]
Length = 889
Score = 40.4 bits (93), Expect = 0.022
Identities = 25/98 (25%), Positives = 51/98 (51%), Gaps = 10/98 (10%)
Query: 44 DYSLFDNVYVKNDFAEPRIGKIIKIWETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNEL 103
D++L N +ND +P +G+I ++W+TP ++ + W++RP + + + Y NE+
Sbjct: 414 DWALLRN---QNDPQKPIVGQIFRLWKTPDGKQWLNACWYYRPEQTVHRVDRL-FYKNEV 469
Query: 104 FFACGDGDGLATIHPLESIAGKCNIVCISKDSR-NPQL 140
G H + ++ GKC ++ ++ R NP +
Sbjct: 470 M-----KTGQYRDHLVSNLVGKCYVIHFTRYQRGNPDM 502
>gb|AAH57623.1| BC060615 protein [Mus musculus]
Length = 193
Score = 40.0 bits (92), Expect = 0.029
Identities = 36/122 (29%), Positives = 61/122 (49%), Gaps = 19/122 (15%)
Query: 17 FKWG----QKRGKGGKKRDIQFYQSF-----TLRGVDYSLFDNVYVKNDFAEPRIGKIIK 67
+KW Q+RG GK R + FY++ TLR D ++F + N P IG+I
Sbjct: 38 WKWSGNPTQRRGMKGKARKL-FYKAIVRGKETLRIGDCAVFLSAGRPN---LPYIGRIES 93
Query: 68 IWETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCN 127
+WE+ +KV+WF+ P E +K N L+ +C + + + +++I+ KC
Sbjct: 94 LWESWGSNMVVKVKWFYHP-EETKLGKRQSDGKNALYQSCHEDE-----NDVQTISHKCQ 147
Query: 128 IV 129
+V
Sbjct: 148 VV 149
>ref|NP_940815.2| hypothetical protein LOC268515 [Mus musculus]
gi|49119708|gb|AAH72602.1| Hypothetical protein
B930044J06 [Mus musculus]
Length = 1191
Score = 40.0 bits (92), Expect = 0.029
Identities = 36/122 (29%), Positives = 61/122 (49%), Gaps = 19/122 (15%)
Query: 17 FKWG----QKRGKGGKKRDIQFYQSF-----TLRGVDYSLFDNVYVKNDFAEPRIGKIIK 67
+KW Q+RG GK R + FY++ TLR D ++F + N P IG+I
Sbjct: 1036 WKWSGNPTQRRGMKGKARKL-FYKAIVRGKETLRIGDCAVFLSAGRPN---LPYIGRIES 1091
Query: 68 IWETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCN 127
+WE+ +KV+WF+ P E +K N L+ +C + + + +++I+ KC
Sbjct: 1092 LWESWGSNMVVKVKWFYHP-EETKLGKRQSDGKNALYQSCHEDE-----NDVQTISHKCQ 1145
Query: 128 IV 129
+V
Sbjct: 1146 VV 1147
>ref|XP_340948.2| PREDICTED: similar to Hypothetical protein B930044J06 [Rattus
norvegicus]
Length = 2313
Score = 40.0 bits (92), Expect = 0.029
Identities = 36/122 (29%), Positives = 61/122 (49%), Gaps = 19/122 (15%)
Query: 17 FKWG----QKRGKGGKKRDIQFYQSF-----TLRGVDYSLFDNVYVKNDFAEPRIGKIIK 67
+KW Q+RG GK R + FY++ TLR D ++F + N P IG+I
Sbjct: 2158 WKWSGNPTQRRGMKGKARKL-FYKAIVRGKETLRIGDCAVFLSAGRPN---LPYIGRIES 2213
Query: 68 IWETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCN 127
+WE+ +KV+WF+ P E +K N L+ +C + + + +++I+ KC
Sbjct: 2214 LWESWGSNMVVKVKWFYHP-EETKLGKRQSDGKNALYQSCHEDE-----NDVQTISHKCQ 2267
Query: 128 IV 129
+V
Sbjct: 2268 VV 2269
>gb|AAH60615.1| BC060615 protein [Mus musculus]
Length = 832
Score = 40.0 bits (92), Expect = 0.029
Identities = 36/122 (29%), Positives = 61/122 (49%), Gaps = 19/122 (15%)
Query: 17 FKWG----QKRGKGGKKRDIQFYQSF-----TLRGVDYSLFDNVYVKNDFAEPRIGKIIK 67
+KW Q+RG GK R + FY++ TLR D ++F + N P IG+I
Sbjct: 677 WKWSGNPTQRRGMKGKARKL-FYKAIVRGKETLRIGDCAVFLSAGRPN---LPYIGRIES 732
Query: 68 IWETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCN 127
+WE+ +KV+WF+ P E +K N L+ +C + + + +++I+ KC
Sbjct: 733 LWESWGSNMVVKVKWFYHP-EETKLGKRQSDGKNALYQSCHEDE-----NDVQTISHKCQ 786
Query: 128 IV 129
+V
Sbjct: 787 VV 788
>gb|AAH44873.1| BC060615 protein [Mus musculus]
Length = 258
Score = 40.0 bits (92), Expect = 0.029
Identities = 36/122 (29%), Positives = 61/122 (49%), Gaps = 19/122 (15%)
Query: 17 FKWG----QKRGKGGKKRDIQFYQSF-----TLRGVDYSLFDNVYVKNDFAEPRIGKIIK 67
+KW Q+RG GK R + FY++ TLR D ++F + N P IG+I
Sbjct: 103 WKWSGNPTQRRGMKGKARKL-FYKAIVRGKETLRIGDCAVFLSAGRPN---LPYIGRIES 158
Query: 68 IWETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCN 127
+WE+ +KV+WF+ P E +K N L+ +C + + + +++I+ KC
Sbjct: 159 LWESWGSNMVVKVKWFYHP-EETKLGKRQSDGKNALYQSCHEDE-----NDVQTISHKCQ 212
Query: 128 IV 129
+V
Sbjct: 213 VV 214
>ref|XP_310389.2| ENSANGP00000005615 [Anopheles gambiae str. PEST]
gi|55243962|gb|EAA05982.3| ENSANGP00000005615 [Anopheles
gambiae str. PEST]
Length = 529
Score = 39.7 bits (91), Expect = 0.038
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 20 GQKRGKGGKKRDIQFYQSFTLRGVDYSLFDN-VYVKNDFAE-PRIGKIIKIWETPTLERK 77
G +R G K+ QFY+S S+ D+ V++ + P IG I +WET T
Sbjct: 360 GYRRSTGRVKK--QFYKSIQRGKETISVGDSAVFLSTGRPDRPYIGHIESMWETSTNNMV 417
Query: 78 IKVQWFFRPIEVSKC 92
++V+WF+ P E C
Sbjct: 418 VRVKWFYHPEETQDC 432
>emb|CAG81276.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50551221|ref|XP_503084.1| hypothetical protein
[Yarrowia lipolytica]
Length = 759
Score = 39.7 bits (91), Expect = 0.038
Identities = 26/98 (26%), Positives = 49/98 (49%), Gaps = 8/98 (8%)
Query: 41 RGVDYSLFDNVYVKN--DFAEPRIGKIIKIWETPTLERKIKVQWFFRPIEVSKCLTWIKI 98
RG Y + D V++ N D ++P IG+I +IW+ P ++ + W++RP + + +
Sbjct: 354 RGDIYRVGDWVHIHNMNDPSKPTIGQIFRIWQAPDGQKWVNACWYYRPEQTVHRVDKV-F 412
Query: 99 YFNELFFACGDGDGLATIHPLESIAGKCNIVCISKDSR 136
Y NE+ G H ++ I KC ++ ++ R
Sbjct: 413 YENEVV-----KSGQYRDHLVDEILEKCFVMFFTRYQR 445
>ref|XP_591789.1| PREDICTED: similar to BC060615 protein, partial [Bos taurus]
Length = 468
Score = 39.7 bits (91), Expect = 0.038
Identities = 36/122 (29%), Positives = 61/122 (49%), Gaps = 19/122 (15%)
Query: 17 FKWG----QKRGKGGKKRDIQFYQSF-----TLRGVDYSLFDNVYVKNDFAEPRIGKIIK 67
+KW Q+RG GK R + FY++ TLR D ++F + N P IG+I
Sbjct: 313 WKWSGNPTQRRGMKGKARKL-FYKAIVRGKETLRIGDCAVFLSAGRPN---LPYIGRIES 368
Query: 68 IWETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCN 127
+WE+ +KV+WF+ P E +K N L+ +C + + + +++I+ KC
Sbjct: 369 MWESWGSNMVVKVKWFYHP-EETKLGKRQSDGKNALYQSCHEDE-----NDVQTISHKCQ 422
Query: 128 IV 129
+V
Sbjct: 423 VV 424
>emb|CAG85771.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50418048|ref|XP_457743.1| unnamed protein product
[Debaryomyces hansenii]
Length = 801
Score = 39.3 bits (90), Expect = 0.050
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 37 SFTLRGVDYSLFDNVYVKN--DFAEPRIGKIIKIWETPTLERKIKVQWFFRPIEVSKCLT 94
S + G Y + D V + N D +P +G+I ++W T + V W++RP + C
Sbjct: 380 SIDINGYSYKIGDWVLIDNPSDPNKPTVGQIFRLWSTEDGTKYTNVCWYYRPEQT--CHR 437
Query: 95 WIKIYF-NELFFACGDGDGLATIHPLESIAGKCNIVCISK 133
+ +++F NE+ C G H I G C ++ +++
Sbjct: 438 YDRLFFMNEV---CKTGQ--YRDHLASEIVGPCYVIFLTR 472
>emb|CAB79267.1| putative protein [Arabidopsis thaliana] gi|3292838|emb|CAA19828.1|
putative protein [Arabidopsis thaliana]
gi|3021264|emb|CAA18459.1| putative protein [Arabidopsis
thaliana] gi|15236393|ref|NP_194043.1| bromo-adjacent
homology (BAH) domain-containing protein [Arabidopsis
thaliana] gi|7485941|pir||T04829 hypothetical protein
F21P8.10 - Arabidopsis thaliana
Length = 360
Score = 39.3 bits (90), Expect = 0.050
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 24 GKGGKKRDIQFYQSFTLRGVDYSLFDNVYVKNDFAEPRIGKIIKIWETPTLER--KIKVQ 81
GKG KK+ Y++F Y L D+V + + E IIK T E K++VQ
Sbjct: 40 GKGEKKKC--HYKTFQFHANKYGLEDSVLLVPEDGEKPYVAIIKDIYTQRKEGHVKLEVQ 97
Query: 82 WFFRPIEVSKCL--TWIKIYFNELFFACGDGDGLATIHPLESIAGKCNIVCISKDSRNP- 138
W +RP EV K W +LF++ + A ES+ C + + ++ + P
Sbjct: 98 WLYRPEEVEKKYVGNWKSKGSRDLFYSFHRDEVFA-----ESVKDDCIVHFVQENKQIPN 152
Query: 139 ----------QLSDKVTWSAAFVFYRYFDVGQRKIVEEVDDKSI 172
+ D V + + FD+ Q++ ++ +K+I
Sbjct: 153 RRKHPGFIVQHVYDNVKKKLRKLTFNGFDLQQKREIDHFVEKTI 196
>emb|CAA19283.1| SPBC4B4.03 [Schizosaccharomyces pombe] gi|19113212|ref|NP_596420.1|
hypothetical protein SPBC4B4.03 [Schizosaccharomyces
pombe 972h-] gi|7490162|pir||T40475 bromeodomain protein
- fission yeast (Schizosaccharomyces pombe)
Length = 803
Score = 39.3 bits (90), Expect = 0.050
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 11 ESETLEFKWGQKRGKGGKKRDIQFYQSFTLRGVDYSLFDNVYVKN--DFAEPRIGKIIKI 68
+SE ++ + K DIQ + ++ G ++ D V ++N D ++P + +I +I
Sbjct: 321 DSEFFNYETDSRASPQLPKNDIQ--PAVSIDGTLLNVGDWVLIRNPADSSKPIVSQIYRI 378
Query: 69 WETPTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCNI 128
W++ + V W+ RP + + Y NE+F L HP+ I G+C +
Sbjct: 379 WKSDDDINYVTVCWYLRPEQTVHRADAV-FYENEVF-----KTSLYRDHPVSEIVGRCFV 432
Query: 129 VCISK 133
+ I++
Sbjct: 433 MYITR 437
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.140 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 341,156,105
Number of Sequences: 2540612
Number of extensions: 14045618
Number of successful extensions: 24678
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 24639
Number of HSP's gapped (non-prelim): 74
length of query: 178
length of database: 863,360,394
effective HSP length: 119
effective length of query: 59
effective length of database: 561,027,566
effective search space: 33100626394
effective search space used: 33100626394
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)
Medicago: description of AC148532.15