BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148528.11 - phase: 0
(143 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF34799.1| 40S ribosomal protein S16 [Euphorbia esula] 265 2e-70
gb|AAM63947.1| 40S ribosomal protein S16 [Arabidopsis thaliana] ... 258 2e-68
gb|AAL15244.1| putative 40S ribosomal protein S16 [Arabidopsis t... 258 2e-68
emb|CAA53567.1| RS16 protein, 40S subunit [Gossypium hirsutum] g... 257 5e-68
gb|AAB86856.1| ribosomal protein S16 [Fritillaria agrestis] gi|3... 256 8e-68
gb|AAF26790.1| putative 40S ribosomal protein S16 [Arabidopsis t... 247 4e-65
gb|AAD23965.1| ribosomal protein S16 [Tortula ruralis] gi|173698... 246 1e-64
pir||T04083 probable ribosomal protein S16 - rice gi|1172818|sp|... 233 1e-60
ref|XP_397146.2| PREDICTED: similar to venom chitinase [Apis mel... 232 2e-60
gb|AAR87752.1| small subunit ribosomal protein S16 [Capsicum ann... 231 3e-60
gb|AAX62440.1| ribosomal protein S16 [Lysiphlebus testaceipes] 231 4e-60
ref|XP_512651.1| PREDICTED: similar to ribosomal protein S16; 40... 228 2e-59
ref|XP_341816.2| PREDICTED: similar to 40S ribosomal protein S16... 228 2e-59
ref|XP_533674.1| PREDICTED: similar to ribosomal protein S16 [Ca... 228 2e-59
gb|AAH64030.1| Rps16 protein [Rattus norvegicus] 228 2e-59
gb|AAX29081.1| ribosomal protein S16 [synthetic construct] 228 2e-59
gb|AAH82286.1| Rps16 protein [Mus musculus] 228 2e-59
gb|AAH90618.1| Rps16 protein [Mus musculus] 228 2e-59
gb|AAH84715.1| Rps16 protein [Rattus norvegicus] 228 2e-59
gb|EAL25384.1| GA17915-PA [Drosophila pseudoobscura] 228 2e-59
>gb|AAF34799.1| 40S ribosomal protein S16 [Euphorbia esula]
Length = 144
Score = 265 bits (677), Expect = 2e-70
Identities = 130/139 (93%), Positives = 135/139 (96%)
Query: 5 EQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGVD 64
E VQCFGRKK AVAVT+CKRGRGLIKING PIELVEPEILRFKA+EPILLLG+HRFAGVD
Sbjct: 6 ESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVD 65
Query: 65 MRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 124
MRIRV GGGHT+QIYAIRQSIAKALVAYYQK+VDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 66 MRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVADPRRC 125
Query: 125 EPKKFGGRGARARFQKSYR 143
EPKKFGGRGARARFQKSYR
Sbjct: 126 EPKKFGGRGARARFQKSYR 144
>gb|AAM63947.1| 40S ribosomal protein S16 [Arabidopsis thaliana]
gi|4558679|gb|AAD22696.1| 40S ribosomal protein S16
[Arabidopsis thaliana] gi|13926208|gb|AAK49582.1| 40S
ribosomal protein S16 [Arabidopsis thaliana]
gi|15226676|ref|NP_178826.1| 40S ribosomal protein S16
(RPS16A) [Arabidopsis thaliana] gi|25294609|pir||E84489
40S ribosomal protein S16 [imported] - Arabidopsis
thaliana
Length = 146
Score = 258 bits (660), Expect = 2e-68
Identities = 125/139 (89%), Positives = 133/139 (94%)
Query: 5 EQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGVD 64
E VQCFGRKK AVAVT+CKRG GLIK+NG PIEL +PEILRFK FEPILLLGKHRFAGV+
Sbjct: 8 ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVN 67
Query: 65 MRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 124
MRIRVNGGGHT+Q+YAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68 MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127
Query: 125 EPKKFGGRGARARFQKSYR 143
EPKKFGGRGAR+R+QKSYR
Sbjct: 128 EPKKFGGRGARSRYQKSYR 146
>gb|AAL15244.1| putative 40S ribosomal protein S16 [Arabidopsis thaliana]
gi|13877831|gb|AAK43993.1| putative 40S ribosomal
protein S16 [Arabidopsis thaliana]
gi|15238809|ref|NP_197339.1| 40S ribosomal protein S16
(RPS16C) [Arabidopsis thaliana]
gi|2500430|sp|Q42340|RS16_ARATH 40S ribosomal protein
S16
Length = 146
Score = 258 bits (659), Expect = 2e-68
Identities = 124/139 (89%), Positives = 133/139 (95%)
Query: 5 EQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGVD 64
E VQCFGRKK AVAVT+CKRG GLIK+NG PIEL +PEILRFK FEP+LLLGKHRFAGV+
Sbjct: 8 ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67
Query: 65 MRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 124
MRIRVNGGGHT+Q+YAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68 MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127
Query: 125 EPKKFGGRGARARFQKSYR 143
EPKKFGGRGAR+R+QKSYR
Sbjct: 128 EPKKFGGRGARSRYQKSYR 146
>emb|CAA53567.1| RS16 protein, 40S subunit [Gossypium hirsutum]
gi|541835|pir||S41193 ribosomal protein S16 protein -
upland cotton gi|1173209|sp|P46293|RS16_GOSHI 40S
ribosomal protein S16
Length = 145
Score = 257 bits (656), Expect = 5e-68
Identities = 127/140 (90%), Positives = 132/140 (93%)
Query: 4 LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 63
+E VQCFGRKK AVAVT+CKRGRGLIKING PIELVEPEILRFKA EPILLLG+ RF GV
Sbjct: 6 IESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRQRFTGV 65
Query: 64 DMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
DMRIRV GGGHT+QIYAIRQSIAKALVA+YQKYVDEQSKKEIKDILV YDRTLLVADPRR
Sbjct: 66 DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVGYDRTLLVADPRR 125
Query: 124 CEPKKFGGRGARARFQKSYR 143
CEPKKFGGRGARARFQKSYR
Sbjct: 126 CEPKKFGGRGARARFQKSYR 145
>gb|AAB86856.1| ribosomal protein S16 [Fritillaria agrestis]
gi|3122800|sp|O22647|RS16_FRIAG 40S ribosomal protein
S16
Length = 145
Score = 256 bits (654), Expect = 8e-68
Identities = 123/139 (88%), Positives = 134/139 (95%)
Query: 5 EQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGVD 64
E VQCFGRKK AVAVT+CKRGRGLIK+NG+PIELV+PEILR+KAFEPILLLG+HRF GVD
Sbjct: 7 ESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRHRFVGVD 66
Query: 65 MRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 124
MRIRV GGG T+QIYAIRQSIAKALVAYYQKYVDEQ+KKE+KDIL+RYDRTLLVADPRRC
Sbjct: 67 MRIRVRGGGKTSQIYAIRQSIAKALVAYYQKYVDEQAKKEVKDILMRYDRTLLVADPRRC 126
Query: 125 EPKKFGGRGARARFQKSYR 143
EPKKFGGRGAR+RFQKSYR
Sbjct: 127 EPKKFGGRGARSRFQKSYR 145
>gb|AAF26790.1| putative 40S ribosomal protein S16 [Arabidopsis thaliana]
gi|28466835|gb|AAO44026.1| At3g04230 [Arabidopsis
thaliana] gi|15229252|ref|NP_187073.1| 40S ribosomal
protein S16 (RPS16B) [Arabidopsis thaliana]
Length = 146
Score = 247 bits (631), Expect = 4e-65
Identities = 119/139 (85%), Positives = 129/139 (92%)
Query: 5 EQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGVD 64
E VQCFGRKK A AVTYCKRG G+IK+NG+PIEL +PEILRFK FEP+LLLGKHRFAGVD
Sbjct: 8 ESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGVD 67
Query: 65 MRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 124
MRIR GGG+T+++YAIRQSIAKALVAYYQKYVDEQSKKEIKDIL+RYDRTLLVADPRRC
Sbjct: 68 MRIRATGGGNTSRVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILMRYDRTLLVADPRRC 127
Query: 125 EPKKFGGRGARARFQKSYR 143
E KKFGG GARARFQKSYR
Sbjct: 128 ESKKFGGPGARARFQKSYR 146
>gb|AAD23965.1| ribosomal protein S16 [Tortula ruralis]
gi|17369864|sp|Q9XEK7|RS16_TORRU 40S ribosomal protein
S16
Length = 142
Score = 246 bits (627), Expect = 1e-64
Identities = 120/143 (83%), Positives = 134/143 (92%), Gaps = 1/143 (0%)
Query: 1 MEKLEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRF 60
M +E VQCFGRKK AVAVTYC+RGRGLI++ PIELVEPEILR+KAFEP+LLLG+ +F
Sbjct: 1 MAAVESVQCFGRKKTAVAVTYCRRGRGLIRLT-VPIELVEPEILRYKAFEPVLLLGRSKF 59
Query: 61 AGVDMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVAD 120
AGVDMRIRV GGG+T+QIYAIRQSIAKALVAY+QKYVDEQSKKEIKD+L+RYDRTLLVAD
Sbjct: 60 AGVDMRIRVKGGGNTSQIYAIRQSIAKALVAYFQKYVDEQSKKEIKDVLLRYDRTLLVAD 119
Query: 121 PRRCEPKKFGGRGARARFQKSYR 143
PRRCEPKKFGGRGAR+RFQKSYR
Sbjct: 120 PRRCEPKKFGGRGARSRFQKSYR 142
>pir||T04083 probable ribosomal protein S16 - rice
gi|1172818|sp|P46294|RS16_ORYSA 40S ribosomal protein
S16 gi|538428|gb|AAA33916.1| ribosomal protein S16
gi|1096552|prf||2111468A ribosomal protein S16
Length = 149
Score = 233 bits (593), Expect = 1e-60
Identities = 113/137 (82%), Positives = 122/137 (88%)
Query: 7 VQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGVDMR 66
VQCFGRKK AVAV+YCK GRGLIK+NG PIEL+ PE+LR KAFEPILL G+ RF +DMR
Sbjct: 13 VQCFGRKKAAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMR 72
Query: 67 IRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEP 126
IRV GGG T+QIYAIRQ+IAKALVAYYQKYVDE SKKE+KDI RYDRTLLVADPRRCEP
Sbjct: 73 IRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRRCEP 132
Query: 127 KKFGGRGARARFQKSYR 143
KKFGGR ARARFQKSYR
Sbjct: 133 KKFGGRRARARFQKSYR 149
>ref|XP_397146.2| PREDICTED: similar to venom chitinase [Apis mellifera]
Length = 766
Score = 232 bits (591), Expect = 2e-60
Identities = 108/142 (76%), Positives = 128/142 (90%)
Query: 2 EKLEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFA 61
E ++ VQ FGRKK+A AV YCKRGRG +++NG P+ELVEP +L++K EPILLLGK +F+
Sbjct: 625 EPIQSVQVFGRKKSATAVAYCKRGRGNLRVNGRPLELVEPRVLQYKLQEPILLLGKEKFS 684
Query: 62 GVDMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADP 121
GVD+R+RVNGGGH AQIYAIRQ+I+KALVAYYQKYVDE SKKE+KDIL++YDRTLLVADP
Sbjct: 685 GVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQKYVDEASKKEVKDILIQYDRTLLVADP 744
Query: 122 RRCEPKKFGGRGARARFQKSYR 143
RRCEPKKFGG GARAR+QKSYR
Sbjct: 745 RRCEPKKFGGPGARARYQKSYR 766
>gb|AAR87752.1| small subunit ribosomal protein S16 [Capsicum annuum]
Length = 123
Score = 231 bits (589), Expect = 3e-60
Identities = 111/122 (90%), Positives = 119/122 (96%)
Query: 22 CKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGVDMRIRVNGGGHTAQIYAI 81
CKRGRGLIKING PIELV+PEILR+KAFEPILLLG+HRFAGVDMRIRV GGGHT+QIYAI
Sbjct: 2 CKRGRGLIKINGVPIELVQPEILRYKAFEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAI 61
Query: 82 RQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKS 141
RQSIAKALVA+YQK+VDEQ KKEIKDIL+RYDRTLLVADPRRCEPKKFGGRGAR+RFQKS
Sbjct: 62 RQSIAKALVAFYQKFVDEQQKKEIKDILIRYDRTLLVADPRRCEPKKFGGRGARSRFQKS 121
Query: 142 YR 143
YR
Sbjct: 122 YR 123
>gb|AAX62440.1| ribosomal protein S16 [Lysiphlebus testaceipes]
Length = 148
Score = 231 bits (588), Expect = 4e-60
Identities = 108/142 (76%), Positives = 126/142 (88%)
Query: 2 EKLEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFA 61
E ++ VQ FGRKK A AV YCKRGRGL+K+NG P+E VEP++L++K EPILLLGK +FA
Sbjct: 7 EPIQSVQVFGRKKTATAVAYCKRGRGLLKVNGRPLEQVEPKVLQYKLQEPILLLGKEKFA 66
Query: 62 GVDMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADP 121
GVDMR+R GGGH AQ+YAIRQ+I+KALVAYYQKYVDE SKKE+KDIL++YDRTLLVADP
Sbjct: 67 GVDMRVRCAGGGHVAQVYAIRQAISKALVAYYQKYVDEASKKEVKDILIQYDRTLLVADP 126
Query: 122 RRCEPKKFGGRGARARFQKSYR 143
RRCEPKKFGG GARAR+QKSYR
Sbjct: 127 RRCEPKKFGGPGARARYQKSYR 148
>ref|XP_512651.1| PREDICTED: similar to ribosomal protein S16; 40S ribosomal protein
S16 [Pan troglodytes] gi|60655875|gb|AAX32501.1|
ribosomal protein S16 [synthetic construct]
gi|61834575|ref|XP_582724.1| PREDICTED: similar to 40S
ribosomal protein S16 [Bos taurus]
gi|14044116|gb|AAH07977.1| Ribosomal protein S16 [Homo
sapiens] gi|13279236|gb|AAH04324.1| Ribosomal protein
S16 [Homo sapiens] gi|57714|emb|CAA35662.1| unnamed
protein product [Rattus rattus]
gi|50403607|sp|P62249|RS16_HUMAN 40S ribosomal protein
S16 gi|54039372|sp|P14131|RS16_MOUSE 40S ribosomal
protein S16 gi|54039370|sp|P62250|RS16_RAT 40S ribosomal
protein S16 gi|26353788|dbj|BAC40524.1| unnamed protein
product [Mus musculus] gi|26353422|dbj|BAC40341.1|
unnamed protein product [Mus musculus]
gi|26350881|dbj|BAC39077.1| unnamed protein product [Mus
musculus] gi|60394813|sp|Q29201|RS16_PIG 40S ribosomal
protein S16 gi|338447|gb|AAA60583.1| RPS16
gi|12859587|dbj|BAB31702.1| unnamed protein product [Mus
musculus] gi|17932976|dbj|BAB79479.1| ribosomal protein
S16 [Homo sapiens] gi|12846934|dbj|BAB27368.1| unnamed
protein product [Mus musculus]
gi|12846230|dbj|BAB27083.1| unnamed protein product [Mus
musculus] gi|12846181|dbj|BAB27062.1| unnamed protein
product [Mus musculus] gi|4506691|ref|NP_001011.1|
ribosomal protein S16 [Homo sapiens]
Length = 146
Score = 228 bits (581), Expect = 2e-59
Identities = 108/140 (77%), Positives = 123/140 (87%)
Query: 4 LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 63
L+ VQ FGRKK A AV +CKRG GLIK+NG P+E++EP L++K EP+LLLGK RFAGV
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 66
Query: 64 DMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
D+R+RV GGGH AQIYAIRQSI+KALVAYYQKYVDE SKKEIKDIL++YDRTLLVADPRR
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 126
Query: 124 CEPKKFGGRGARARFQKSYR 143
CE KKFGG GARAR+QKSYR
Sbjct: 127 CESKKFGGPGARARYQKSYR 146
>ref|XP_341816.2| PREDICTED: similar to 40S ribosomal protein S16 [Rattus norvegicus]
Length = 264
Score = 228 bits (581), Expect = 2e-59
Identities = 108/140 (77%), Positives = 123/140 (87%)
Query: 4 LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 63
L+ VQ FGRKK A AV +CKRG GLIK+NG P+E++EP L++K EP+LLLGK RFAGV
Sbjct: 125 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 184
Query: 64 DMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
D+R+RV GGGH AQIYAIRQSI+KALVAYYQKYVDE SKKEIKDIL++YDRTLLVADPRR
Sbjct: 185 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 244
Query: 124 CEPKKFGGRGARARFQKSYR 143
CE KKFGG GARAR+QKSYR
Sbjct: 245 CESKKFGGPGARARYQKSYR 264
>ref|XP_533674.1| PREDICTED: similar to ribosomal protein S16 [Canis familiaris]
Length = 181
Score = 228 bits (581), Expect = 2e-59
Identities = 108/140 (77%), Positives = 123/140 (87%)
Query: 4 LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 63
L+ VQ FGRKK A AV +CKRG GLIK+NG P+E++EP L++K EP+LLLGK RFAGV
Sbjct: 42 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 101
Query: 64 DMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
D+R+RV GGGH AQIYAIRQSI+KALVAYYQKYVDE SKKEIKDIL++YDRTLLVADPRR
Sbjct: 102 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 161
Query: 124 CEPKKFGGRGARARFQKSYR 143
CE KKFGG GARAR+QKSYR
Sbjct: 162 CESKKFGGPGARARYQKSYR 181
>gb|AAH64030.1| Rps16 protein [Rattus norvegicus]
Length = 161
Score = 228 bits (581), Expect = 2e-59
Identities = 108/140 (77%), Positives = 123/140 (87%)
Query: 4 LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 63
L+ VQ FGRKK A AV +CKRG GLIK+NG P+E++EP L++K EP+LLLGK RFAGV
Sbjct: 22 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 81
Query: 64 DMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
D+R+RV GGGH AQIYAIRQSI+KALVAYYQKYVDE SKKEIKDIL++YDRTLLVADPRR
Sbjct: 82 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 141
Query: 124 CEPKKFGGRGARARFQKSYR 143
CE KKFGG GARAR+QKSYR
Sbjct: 142 CESKKFGGPGARARYQKSYR 161
>gb|AAX29081.1| ribosomal protein S16 [synthetic construct]
Length = 147
Score = 228 bits (581), Expect = 2e-59
Identities = 108/140 (77%), Positives = 123/140 (87%)
Query: 4 LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 63
L+ VQ FGRKK A AV +CKRG GLIK+NG P+E++EP L++K EP+LLLGK RFAGV
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 66
Query: 64 DMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
D+R+RV GGGH AQIYAIRQSI+KALVAYYQKYVDE SKKEIKDIL++YDRTLLVADPRR
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 126
Query: 124 CEPKKFGGRGARARFQKSYR 143
CE KKFGG GARAR+QKSYR
Sbjct: 127 CESKKFGGPGARARYQKSYR 146
>gb|AAH82286.1| Rps16 protein [Mus musculus]
Length = 157
Score = 228 bits (581), Expect = 2e-59
Identities = 108/140 (77%), Positives = 123/140 (87%)
Query: 4 LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 63
L+ VQ FGRKK A AV +CKRG GLIK+NG P+E++EP L++K EP+LLLGK RFAGV
Sbjct: 18 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 77
Query: 64 DMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
D+R+RV GGGH AQIYAIRQSI+KALVAYYQKYVDE SKKEIKDIL++YDRTLLVADPRR
Sbjct: 78 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 137
Query: 124 CEPKKFGGRGARARFQKSYR 143
CE KKFGG GARAR+QKSYR
Sbjct: 138 CESKKFGGPGARARYQKSYR 157
>gb|AAH90618.1| Rps16 protein [Mus musculus]
Length = 172
Score = 228 bits (581), Expect = 2e-59
Identities = 108/140 (77%), Positives = 123/140 (87%)
Query: 4 LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 63
L+ VQ FGRKK A AV +CKRG GLIK+NG P+E++EP L++K EP+LLLGK RFAGV
Sbjct: 33 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 92
Query: 64 DMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
D+R+RV GGGH AQIYAIRQSI+KALVAYYQKYVDE SKKEIKDIL++YDRTLLVADPRR
Sbjct: 93 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 152
Query: 124 CEPKKFGGRGARARFQKSYR 143
CE KKFGG GARAR+QKSYR
Sbjct: 153 CESKKFGGPGARARYQKSYR 172
>gb|AAH84715.1| Rps16 protein [Rattus norvegicus]
Length = 159
Score = 228 bits (581), Expect = 2e-59
Identities = 108/140 (77%), Positives = 123/140 (87%)
Query: 4 LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 63
L+ VQ FGRKK A AV +CKRG GLIK+NG P+E++EP L++K EP+LLLGK RFAGV
Sbjct: 20 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 79
Query: 64 DMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
D+R+RV GGGH AQIYAIRQSI+KALVAYYQKYVDE SKKEIKDIL++YDRTLLVADPRR
Sbjct: 80 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 139
Query: 124 CEPKKFGGRGARARFQKSYR 143
CE KKFGG GARAR+QKSYR
Sbjct: 140 CESKKFGGPGARARYQKSYR 159
>gb|EAL25384.1| GA17915-PA [Drosophila pseudoobscura]
Length = 148
Score = 228 bits (581), Expect = 2e-59
Identities = 107/142 (75%), Positives = 126/142 (88%)
Query: 2 EKLEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFA 61
E ++ VQ FGRKK A AV YCKRG GL+K+NG P+E +EP++L++K EP+LLLGK +FA
Sbjct: 7 EPVQAVQVFGRKKTATAVAYCKRGSGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFA 66
Query: 62 GVDMRIRVNGGGHTAQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADP 121
GVD+R+RVNGGGH AQIYAIRQ+I+KALVA+YQKYVDE SKKEIKDILV+YDRTLLV DP
Sbjct: 67 GVDIRVRVNGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDP 126
Query: 122 RRCEPKKFGGRGARARFQKSYR 143
RRCEPKKFGG GARAR+QKSYR
Sbjct: 127 RRCEPKKFGGPGARARYQKSYR 148
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.142 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,635,954
Number of Sequences: 2540612
Number of extensions: 8652729
Number of successful extensions: 28200
Number of sequences better than 10.0: 450
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 27604
Number of HSP's gapped (non-prelim): 454
length of query: 143
length of database: 863,360,394
effective HSP length: 119
effective length of query: 24
effective length of database: 561,027,566
effective search space: 13464661584
effective search space used: 13464661584
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC148528.11