BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148486.12 + phase: 0 /partial
(391 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO14624.1| hypothetical protein [Prunus persica] 335 1e-90
dbj|BAD95060.1| hypothetical protein [Arabidopsis thaliana] gi|1... 278 3e-73
pir||H86331 F6F9.9 protein - Arabidopsis thaliana gi|10086485|gb... 278 3e-73
ref|XP_474231.1| OSJNBa0084K01.15 [Oryza sativa (japonica cultiv... 221 3e-56
dbj|BAB10706.1| unnamed protein product [Arabidopsis thaliana] g... 111 3e-23
emb|CAB62640.1| hypothetical protein [Arabidopsis thaliana] gi|1... 105 3e-21
gb|AAN18081.1| At3g51180/F24M12_220 [Arabidopsis thaliana] gi|14... 105 3e-21
gb|AAD51942.1| flowering-time protein isoform alpha [Zea mays] 63 2e-08
ref|NP_914932.1| putative flowering-time protein isoform alpha [... 59 3e-07
gb|AAX51265.1| luminidependens [Arabidopsis thaliana] 50 9e-05
emb|CAB80749.1| LUMINIDEPENDENS protein [Arabidopsis thaliana] g... 50 9e-05
sp|Q38796|LUMI_ARATH Homeobox protein LUMINIDEPENDENS gi|424106|... 50 1e-04
gb|AAF54383.1| CG16779-PA [Drosophila melanogaster] gi|24645378|... 44 0.011
gb|AAC47851.1| CG1 [Plasmodium falciparum] gi|7494270|pir||T0907... 43 0.019
emb|CAH00517.1| unnamed protein product [Kluyveromyces lactis NR... 42 0.042
gb|AAC47850.1| CG1 [Plasmodium falciparum] 41 0.055
emb|CAA09717.1| Muf1 protein [Kluyveromyces lactis] 41 0.072
gb|AAC47840.1| CG1 [Plasmodium falciparum] 41 0.072
gb|AAK01470.1| floral homeotic protein HUA1 [Arabidopsis thalian... 40 0.094
ref|XP_489144.1| PREDICTED: hypothetical protein XP_489144 [Mus ... 40 0.094
>gb|AAO14624.1| hypothetical protein [Prunus persica]
Length = 446
Score = 335 bits (860), Expect = 1e-90
Identities = 196/430 (45%), Positives = 257/430 (59%), Gaps = 49/430 (11%)
Query: 1 VRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDILPPGFEGTHTSSQFDIKLSDI 60
V+LFL EESPSQVGL++QDHLQ K S L GSDDILPPGFEG ++++Q I +S I
Sbjct: 26 VKLFLLEESPSQVGLSAQDHLQAKASWLSHSSGTGSDDILPPGFEGAYSANQLQINVSQI 85
Query: 61 PVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSIPPNP-ISVDVD 119
P+I W PP++VL+ TWQVV GEESKE+ Q+QRE+RVLEA+YPR S+IP NP + DV+
Sbjct: 86 PLIKWRCPPRVVLNFTWQVVCGEESKEVEIQNQREIRVLEAVYPRPSAIPLNPSVLADVE 145
Query: 120 DSHYIDGHIVVIPITPVEDGDVGADTLSPGILDGSNTVTTMSMVS--------------- 164
DS + D VIPIT +ED DVG DT S + + +T S +S
Sbjct: 146 DSGHNDVQPPVIPITSIEDEDVGVDTSSASMAPFNIHTSTQSFLSVQGIAAPSQSVVPNN 205
Query: 165 --------------------DVAAASVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKL 204
VAAAS A ++V S+EHGN+ID ELL IL+NP++IEKL
Sbjct: 206 RNHPTSNKPVAGIPVGVEPDVVAAASAAFGAIVNSNEHGNMIDHELLIKILSNPKMIEKL 265
Query: 205 VRNYNVQNAQYAQNTGSSSNVFSHPPNPFNQVE-TTTSSSNAFSSTSSY--THTTGGQMA 261
V++ ++ PP N+ E ++T SS A SS Y + G
Sbjct: 266 VKD------PQPMTRPPQMSIADPPPVHINRTESSSTPSSTALSSGHFYPQPNVAGMGRF 319
Query: 262 PTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQP 321
P H + S A P P KD+NYYKSLIQQHGGD+ ++ P NR +
Sbjct: 320 PDARPPPHAAISVPSPPAVGP---PPAKDINYYKSLIQQHGGDRHDSFP-PFGNRHSDHS 375
Query: 322 LSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMHSS 381
N ++ + ++++ SKPKI KPCI+FNSSRGCR+GANC +QHDASFQP+ + + +HS+
Sbjct: 376 AINQESNNGYKSRDSKPKIMKPCIYFNSSRGCRHGANCAYQHDASFQPRGSSSAPEVHST 435
Query: 382 KRMKMDNEIS 391
KRMKMD EIS
Sbjct: 436 KRMKMDREIS 445
>dbj|BAD95060.1| hypothetical protein [Arabidopsis thaliana]
gi|18394792|ref|NP_564096.1| zinc finger (CCCH-type)
family protein [Arabidopsis thaliana]
Length = 413
Score = 278 bits (710), Expect = 3e-73
Identities = 179/418 (42%), Positives = 246/418 (58%), Gaps = 52/418 (12%)
Query: 1 VRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDILPPGFEGTHTSSQFDIKLSDI 60
VRLF+SE+SPSQVG SQDHLQ K P SDD LPPGF G ++++ IKLSDI
Sbjct: 19 VRLFISEDSPSQVGSESQDHLQAKS----PLASHPSDDNLPPGFGGPFSANESQIKLSDI 74
Query: 61 PVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSIPPNP-ISVDVD 119
P+I W +I+LD W+VVAG+ESKE+ Q++RE+RVLEA YP SSIPPNP + DV+
Sbjct: 75 PLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAFYPGASSIPPNPSVPADVE 134
Query: 120 DSHYIDGHIVVIPITPVEDGDVGADTLS-------------PGILD-GSNTVTTMSMVSD 165
DSH+ D +VIPI PVED D+ D+ S P I D ++T +T+ D
Sbjct: 135 DSHHDDQQTIVIPILPVEDDDIAMDSASDFPTQSGVDVGTEPSITDENTSTSSTLPAGPD 194
Query: 166 VAAASVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKLVRNYNVQNAQYAQNTGSSSNV 225
+ A AL+++ S E G++ID +LL IL+NP+++E LV N + ++S++
Sbjct: 195 IMA---ALSAISNSKEQGSMIDQDLLIKILSNPKLVENLVAN----RGSAGSVSSNTSSL 247
Query: 226 FSHPPNPFNQVETTT--SSSNAFSSTSSYTHTTGGQMAPTMSTQWHRRPEISSAIAATPV 283
+S + N V TT SS+ F + TH P M+ H P+ A
Sbjct: 248 YSSSTHEANGVVTTAPISSNGQFYAQPPITH------IPPMAYTPH-APQDQPNYGA--- 297
Query: 284 EVPSTKDVNYYKSLIQQHGGDKQEALPYSS-SNRQNQQPLS--NYDTV----HNFRAKGS 336
P +D +YYK+LIQQHGGD+QE P R N QP N + V +N R + S
Sbjct: 298 --PPARDASYYKNLIQQHGGDRQETPPVQHLGYRYNLQPGGGPNPEMVNSSNNNQRPRDS 355
Query: 337 KPKISKPCIFFNSSRGCRNGANCTFQHDAS-FQPQQGN----PSSGMHSSKRMKMDNE 389
KPKI K C++FNS+RGCR+GANC +QHDA+ +QP+ N +S M ++KRM+ D +
Sbjct: 356 KPKIMKACMYFNSARGCRHGANCMYQHDATPYQPRNLNNGNINTSDMQNAKRMRFDRD 413
>pir||H86331 F6F9.9 protein - Arabidopsis thaliana gi|10086485|gb|AAG12545.1|
Hypothetical Protein [Arabidopsis thaliana]
Length = 420
Score = 278 bits (710), Expect = 3e-73
Identities = 179/418 (42%), Positives = 246/418 (58%), Gaps = 52/418 (12%)
Query: 1 VRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDILPPGFEGTHTSSQFDIKLSDI 60
VRLF+SE+SPSQVG SQDHLQ K P SDD LPPGF G ++++ IKLSDI
Sbjct: 26 VRLFISEDSPSQVGSESQDHLQAKS----PLASHPSDDNLPPGFGGPFSANESQIKLSDI 81
Query: 61 PVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSIPPNP-ISVDVD 119
P+I W +I+LD W+VVAG+ESKE+ Q++RE+RVLEA YP SSIPPNP + DV+
Sbjct: 82 PLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAFYPGASSIPPNPSVPADVE 141
Query: 120 DSHYIDGHIVVIPITPVEDGDVGADTLS-------------PGILD-GSNTVTTMSMVSD 165
DSH+ D +VIPI PVED D+ D+ S P I D ++T +T+ D
Sbjct: 142 DSHHDDQQTIVIPILPVEDDDIAMDSASDFPTQSGVDVGTEPSITDENTSTSSTLPAGPD 201
Query: 166 VAAASVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKLVRNYNVQNAQYAQNTGSSSNV 225
+ A AL+++ S E G++ID +LL IL+NP+++E LV N + ++S++
Sbjct: 202 IMA---ALSAISNSKEQGSMIDQDLLIKILSNPKLVENLVAN----RGSAGSVSSNTSSL 254
Query: 226 FSHPPNPFNQVETTT--SSSNAFSSTSSYTHTTGGQMAPTMSTQWHRRPEISSAIAATPV 283
+S + N V TT SS+ F + TH P M+ H P+ A
Sbjct: 255 YSSSTHEANGVVTTAPISSNGQFYAQPPITH------IPPMAYTPH-APQDQPNYGA--- 304
Query: 284 EVPSTKDVNYYKSLIQQHGGDKQEALPYSS-SNRQNQQPLS--NYDTV----HNFRAKGS 336
P +D +YYK+LIQQHGGD+QE P R N QP N + V +N R + S
Sbjct: 305 --PPARDASYYKNLIQQHGGDRQETPPVQHLGYRYNLQPGGGPNPEMVNSSNNNQRPRDS 362
Query: 337 KPKISKPCIFFNSSRGCRNGANCTFQHDAS-FQPQQGN----PSSGMHSSKRMKMDNE 389
KPKI K C++FNS+RGCR+GANC +QHDA+ +QP+ N +S M ++KRM+ D +
Sbjct: 363 KPKIMKACMYFNSARGCRHGANCMYQHDATPYQPRNLNNGNINTSDMQNAKRMRFDRD 420
>ref|XP_474231.1| OSJNBa0084K01.15 [Oryza sativa (japonica cultivar-group)]
gi|38346075|emb|CAE04843.2| OSJNBa0084K01.15 [Oryza
sativa (japonica cultivar-group)]
Length = 451
Score = 221 bits (563), Expect = 3e-56
Identities = 154/450 (34%), Positives = 223/450 (49%), Gaps = 69/450 (15%)
Query: 1 VRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDILPPGFEGTHTSSQFDIKLSDI 60
VRLFLSE+SPSQ GL QD+LQ K S LL SDD LPPGFE S+ I +S I
Sbjct: 3 VRLFLSEDSPSQAGLRPQDNLQAKGSWLLHAAGPSSDDSLPPGFESLPPSNDLKIDMSQI 62
Query: 61 PVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSIPPNP-ISVDVD 119
P+I W PP IVL+ W +VAGEES+EI Q++R LEAIYPR S+IPPNP +S+DV
Sbjct: 63 PLIRWKCPPHIVLEQDWHIVAGEESREIEIQNERINGALEAIYPRPSNIPPNPFLSLDVK 122
Query: 120 DSHYIDGHIVVIPITPVEDGDVGADTLSP--------GILDGSNT-------------VT 158
D+HY D +++P+ P+ED D P I SNT ++
Sbjct: 123 DAHYDDSKTLLVPLIPLEDDDASDQLEGPTLDLPSHYNITGVSNTPVSAEQQPPCGGAIS 182
Query: 159 TMSMVSDVAAASVALTSLVK----------SSEHGNLIDPELLNDILNNPEVIEKLVRNY 208
+ + AA S +T++++ + ++G+ ID ELL IL++P +++L++
Sbjct: 183 SGFTIEPQAAVSATVTAIMQTIQSNQNGSMADQNGSTIDQELLFKILSDPSQLQRLMKEC 242
Query: 209 NVQNAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAP------ 262
+ + ++ + + S PP + T SS FS H + P
Sbjct: 243 GPVRHEQSASSSVVAPLVSIPP-----PQITASSPAPFSDHVGTFHGMNPTLPPPPPMMN 297
Query: 263 -----TMSTQWHRRPEISSAI---AATPVEVPST-------KDVNYYKSLIQQHGGDK-- 305
S + P S A+ +A P PS + V YYK+LI QHGG++
Sbjct: 298 RPPSTIPSVAMNHPPSSSPAMNFGSALPSSSPSVNFGSVPGRGVGYYKTLIHQHGGERLE 357
Query: 306 ----QEALPYSSSNRQNQQPLSNYDTVHNFRA---KGSKPKISKPCIFFNSSRGCRNGAN 358
Q + + + D ++ A + K + KPC +FNS +GCRNGA+
Sbjct: 358 QPFEQHGMQFGMYRQPGPPQNGGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCRNGAS 417
Query: 359 CTFQHDASFQPQQGNPSSGMHSSKRMKMDN 388
CTF HDAS ++ + SKR+K+DN
Sbjct: 418 CTFLHDASAPTRKDHQK--QKGSKRIKLDN 445
>dbj|BAB10706.1| unnamed protein product [Arabidopsis thaliana]
gi|26450354|dbj|BAC42293.1| unknown protein [Arabidopsis
thaliana] gi|28827720|gb|AAO50704.1| unknown protein
[Arabidopsis thaliana] gi|15239332|ref|NP_201428.1| zinc
finger (CCCH-type) family protein [Arabidopsis thaliana]
Length = 449
Score = 111 bits (278), Expect = 3e-23
Identities = 118/442 (26%), Positives = 190/442 (42%), Gaps = 111/442 (25%)
Query: 1 VRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDILPPGFEGTHTSSQFDIKLSDI 60
V+LFLS++ P +V N LPPGFE T +++ I S I
Sbjct: 21 VKLFLSDDCPVKVASN-----------------------LPPGFEATDYATKRII--SHI 55
Query: 61 PVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSIPPNP-ISVDVD 119
P I W +PP VLD V +G +S E ++ R +VLEA YP S IP P +++ V+
Sbjct: 56 PRIKWKRPPLFVLDDALLVGSGGKSIETRSENLRISKVLEAFYPHRSVIPSRPSLTLAVE 115
Query: 120 DSHYIDGHIVVIPITPVED-GDVGADTL----SPGILDGSNTVTTMSMVSDVAAASVALT 174
+ HY DG IP+T VED D A++ +P + G ++ AS AL+
Sbjct: 116 EEHYDDGKTPNIPLTHVEDERDAAAESSHSFEAPAAVSGLGPELSL-------LASAALS 168
Query: 175 SLVKSSEHGNLIDPELLNDILNNPEVIEKLVR--------------NYNVQNAQYA-QNT 219
+L K E G+ +DP+LL +L++P+++E L+ N ++ + A Q+
Sbjct: 169 ALTK--EQGSQVDPDLLVKLLSDPKIVENLINGMKGKPLETANNSLNTDITEPRLAPQHV 226
Query: 220 GSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPTMSTQW---------HR 270
S++ + PP P N S S+T M+ +S H
Sbjct: 227 TSTTMDRNPPPMPGNVAPHNVPVSVQSSATDPPLPKPNQPMSSALSMNLTLQKPTPVVHN 286
Query: 271 RP-----EISSAIAATPVEVPSTKD---VNYYKSLI-------------QQHGGDKQEAL 309
P ++ + A P++ PST D V+ K+ + + + +
Sbjct: 287 YPLSSGIKVEDSYTAAPLK-PSTGDDVVVSEQKTQLLFPCSSWNMNKVPESARTETDPQI 345
Query: 310 PYSSSNRQNQ---QPLSNYDTVHN-FRAKGS---------------------KPKISKPC 344
++NR +Q +P+ + D N R G+ K +I KPC
Sbjct: 346 RNGNTNRDDQVSAKPVKDLDYFKNLIREHGAVKPATTETNNYKGRVDHKKIVKVRIQKPC 405
Query: 345 IFFNSSRGCRNGANCTFQHDAS 366
++FN +GCR G +C + HD+S
Sbjct: 406 MYFNRPKGCRMGESCLYLHDSS 427
>emb|CAB62640.1| hypothetical protein [Arabidopsis thaliana] gi|11357627|pir||T45749
hypothetical protein F24M12.220 - Arabidopsis thaliana
(fragment)
Length = 499
Score = 105 bits (261), Expect = 3e-21
Identities = 82/257 (31%), Positives = 126/257 (48%), Gaps = 38/257 (14%)
Query: 1 VRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDILPPGFEGTHTSSQFDIKLSDI 60
V++F +E+SP+ V Q H S P+G LPPGFEG H + + ++ S+I
Sbjct: 1 VKVFRTEDSPANVASQPQRH---SYPSRKPRGPD-----LPPGFEGNHYAVKPNV--SNI 50
Query: 61 PVISWIKPP-KIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSIPPNP-ISVDV 118
P I W +PP K ++ TW V G S E +++ R +VLEAIYP S+IP P +S V
Sbjct: 51 PRIKWKRPPPKFSVNDTWLVGCGGGSSEWQNENLRISKVLEAIYPHRSAIPSRPSVSPAV 110
Query: 119 DDSHYIDGHIVVIPITPVEDG-------------DVGADTLSPGILDGSNTVTTMSMVSD 165
+ + D I +TP+ED + G G L+ +T VS
Sbjct: 111 EAECFDDSKTPAIRLTPIEDESESSSEESSNSKVESGVTANKQGQLETKPLCSTQEQVSG 170
Query: 166 VA--------AASVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKLV-----RNYNVQN 212
+ AAS ALT+L+K+ E G+L+D ELL L++P++I+ L+ ++ +N
Sbjct: 171 LTGLAPDLSLAASAALTALMKTKEQGSLVDTELLIKFLSDPKLIKNLITDTSGKSSETKN 230
Query: 213 AQYAQNTGSSSNVFSHP 229
N S++ P
Sbjct: 231 QPIVTNINSATRPVPQP 247
Score = 54.3 bits (129), Expect = 6e-06
Identities = 46/167 (27%), Positives = 71/167 (41%), Gaps = 24/167 (14%)
Query: 224 NVFSHP-----PNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPTMSTQWHRRPEISSAI 278
NVFS P P P +Q + +S SS G Q T + + AI
Sbjct: 343 NVFSEPKVIVNPQPQHQPYSAFRTSEMNYVQSSIGLGRGPQ---TGFNSYPMNFSRADAI 399
Query: 279 AATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQPLSNYDTVHNFRAKGSKP 338
+ V K ++Y+K+LI++HG D E Y S + N + +H
Sbjct: 400 GSAKPVVQPMKGLDYFKNLIREHGTDNHETNQYHSQTGIFNGRIDNNNKIH--------- 450
Query: 339 KISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMHSSKRMK 385
+ CI+F ++ GC G +CT+ HD ++P N + +KRMK
Sbjct: 451 ---QQCIYFGTANGCNMGDSCTYVHD-RYRP---NFEAAAPRAKRMK 490
>gb|AAN18081.1| At3g51180/F24M12_220 [Arabidopsis thaliana]
gi|14335012|gb|AAK59770.1| AT3g51180/F24M12_220
[Arabidopsis thaliana] gi|18409281|ref|NP_566947.1| zinc
finger (CCCH-type) family protein [Arabidopsis thaliana]
Length = 521
Score = 105 bits (261), Expect = 3e-21
Identities = 82/257 (31%), Positives = 126/257 (48%), Gaps = 38/257 (14%)
Query: 1 VRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDILPPGFEGTHTSSQFDIKLSDI 60
V++F +E+SP+ V Q H S P+G LPPGFEG H + + ++ S+I
Sbjct: 23 VKVFRTEDSPANVASQPQRH---SYPSRKPRGPD-----LPPGFEGNHYAVKPNV--SNI 72
Query: 61 PVISWIKPP-KIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSIPPNP-ISVDV 118
P I W +PP K ++ TW V G S E +++ R +VLEAIYP S+IP P +S V
Sbjct: 73 PRIKWKRPPPKFSVNDTWLVGCGGGSSEWQNENLRISKVLEAIYPHRSAIPSRPSVSPAV 132
Query: 119 DDSHYIDGHIVVIPITPVEDG-------------DVGADTLSPGILDGSNTVTTMSMVSD 165
+ + D I +TP+ED + G G L+ +T VS
Sbjct: 133 EAECFDDSKTPAIRLTPIEDESESSSEESSNSKVESGVTANKQGQLETKPLCSTQEQVSG 192
Query: 166 VA--------AASVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKLV-----RNYNVQN 212
+ AAS ALT+L+K+ E G+L+D ELL L++P++I+ L+ ++ +N
Sbjct: 193 LTGLAPDLSLAASAALTALMKTKEQGSLVDTELLIKFLSDPKLIKNLITDTSGKSSETKN 252
Query: 213 AQYAQNTGSSSNVFSHP 229
N S++ P
Sbjct: 253 QPIVTNINSATRPVPQP 269
Score = 54.3 bits (129), Expect = 6e-06
Identities = 46/167 (27%), Positives = 71/167 (41%), Gaps = 24/167 (14%)
Query: 224 NVFSHP-----PNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPTMSTQWHRRPEISSAI 278
NVFS P P P +Q + +S SS G Q T + + AI
Sbjct: 365 NVFSEPKVIVNPQPQHQPYSAFRTSEMNYVQSSIGLGRGPQ---TGFNSYPMNFSRADAI 421
Query: 279 AATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQPLSNYDTVHNFRAKGSKP 338
+ V K ++Y+K+LI++HG D E Y S + N + +H
Sbjct: 422 GSAKPVVQPMKGLDYFKNLIREHGTDNHETNQYHSQTGIFNGRIDNNNKIH--------- 472
Query: 339 KISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMHSSKRMK 385
+ CI+F ++ GC G +CT+ HD ++P N + +KRMK
Sbjct: 473 ---QQCIYFGTANGCNMGDSCTYVHD-RYRP---NFEAAAPRAKRMK 512
>gb|AAD51942.1| flowering-time protein isoform alpha [Zea mays]
Length = 1175
Score = 62.8 bits (151), Expect = 2e-08
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 55 IKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSIPPNP- 113
IK D + W PP + +D +W V AG+ SKE+ Q QR R E Y +P NP
Sbjct: 593 IKKLDCKKVLWQIPPAVWIDPSWSVGAGDNSKELEVQTQRNRREKETFYTSQKDVPMNPK 652
Query: 114 ----ISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLSPGILDGSNTVTTMSMVSDVAAA 169
+ +D DDS + +PI V D D +T S G + ++ V D
Sbjct: 653 DPWDLEMDFDDSLTPE-----VPIDQVPDVD-AMETESVGA-----APSAVAPVKDKQIE 701
Query: 170 SVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKLVRN--YNVQNAQ 214
S + TS + + D ELL +L NPE++ L N N+ N Q
Sbjct: 702 SASSTSGAVADDEEANTDYELLTVLLRNPELVFALTSNKGENMPNEQ 748
>ref|NP_914932.1| putative flowering-time protein isoform alpha [Oryza sativa
(japonica cultivar-group)] gi|15408787|dbj|BAB64183.1|
putative flowering-time protein [Oryza sativa (japonica
cultivar-group)] gi|21104660|dbj|BAB93251.1| putative
flowering-time protein [Oryza sativa (japonica
cultivar-group)]
Length = 1168
Score = 58.9 bits (141), Expect = 3e-07
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 49 TSSQFDIKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISS 108
T+ + I+ D + W PP++ +D W + AGE SKE Q QR R E Y +
Sbjct: 564 TAKENFIEKLDSKRVIWQIPPEVWIDPAWSLGAGENSKEFEVQTQRNRREKETFYASLKD 623
Query: 109 IPPNP-----ISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLSPGILDGSNTVTTMSMV 163
IP NP + +D DDS + P P+E AD + + + + +V
Sbjct: 624 IPLNPKGPWDVEMDFDDS--------LTPEIPIEQ-PPDADAMETDSVSTAPPNIVVPVV 674
Query: 164 SDVAAASVALTSLVKSSEHGNLIDP--ELLNDILNNPEVIEKLVRN 207
++ +++ V + +G +P ELL +L NP+++ L N
Sbjct: 675 DKQIGSTSSVSPAVAAGANGATSEPDLELLAVLLKNPQLVFALTSN 720
>gb|AAX51265.1| luminidependens [Arabidopsis thaliana]
Length = 944
Score = 50.4 bits (119), Expect = 9e-05
Identities = 60/223 (26%), Positives = 85/223 (37%), Gaps = 41/223 (18%)
Query: 50 SSQFDIKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSI 109
SSQ +K I W PP + LD W+V AG SKE Q R R E Y + +I
Sbjct: 563 SSQTILKNCKRKQIDWHVPPGMELDELWRVAAGGNSKEADVQRNRNRRERETTYQSLQTI 622
Query: 110 PPNP-----ISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLSPGILDGSNTVTTMSMVS 164
P NP +D DDS + P P + + T LD
Sbjct: 623 PLNPKEPWDREMDYDDS--------LTPEIPSQQPPEESLTEPQDSLDERR--------- 665
Query: 165 DVAAASVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKLVRNYNVQNAQYAQNTGSSSN 224
+AA + +S + S E D ELL +L NP+++ YA +G SN
Sbjct: 666 -IAAGAATTSSSLSSPEP----DLELLAALLKNPDLV-------------YALTSGKPSN 707
Query: 225 VFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQM-APTMST 266
+ V T + +++ SS + +PT ST
Sbjct: 708 LAGQDMVKLLDVIKTGAPNSSSSSNKQVEERVEVSLPSPTPST 750
>emb|CAB80749.1| LUMINIDEPENDENS protein [Arabidopsis thaliana]
gi|2262149|gb|AAC78261.1| LUMINIDEPENDENS protein
[Arabidopsis thaliana] gi|15235405|ref|NP_192165.1|
homeobox protein LUMINIDEPENDENS (LD) [Arabidopsis
thaliana]
Length = 953
Score = 50.4 bits (119), Expect = 9e-05
Identities = 60/223 (26%), Positives = 85/223 (37%), Gaps = 41/223 (18%)
Query: 50 SSQFDIKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSI 109
SSQ +K I W PP + LD W+V AG SKE Q R R E Y + +I
Sbjct: 572 SSQTILKNCKRKQIDWHVPPGMELDELWRVAAGGNSKEADVQRNRNRRERETTYQSLQTI 631
Query: 110 PPNP-----ISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLSPGILDGSNTVTTMSMVS 164
P NP +D DDS + P P + + T LD
Sbjct: 632 PLNPKEPWDREMDYDDS--------LTPEIPSQQPPEESLTEPQDSLDERR--------- 674
Query: 165 DVAAASVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKLVRNYNVQNAQYAQNTGSSSN 224
+AA + +S + S E D ELL +L NP+++ YA +G SN
Sbjct: 675 -IAAGAATTSSSLSSPEP----DLELLAALLKNPDLV-------------YALTSGKPSN 716
Query: 225 VFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQM-APTMST 266
+ V T + +++ SS + +PT ST
Sbjct: 717 LAGQDMVKLLDVIKTGAPNSSSSSNKQVEERVEVSLPSPTPST 759
>sp|Q38796|LUMI_ARATH Homeobox protein LUMINIDEPENDENS gi|424106|gb|AAA19115.1| mutant
phenotype: late flowering
Length = 953
Score = 50.1 bits (118), Expect = 1e-04
Identities = 60/223 (26%), Positives = 85/223 (37%), Gaps = 41/223 (18%)
Query: 50 SSQFDIKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSI 109
SSQ +K I W PP + LD W+V AG SKE Q R R E Y + +I
Sbjct: 572 SSQTILKNCKRKQIDWHVPPGMELDELWRVAAGGNSKEADVQRNRNRRERETTYQSLQTI 631
Query: 110 PPNP-----ISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLSPGILDGSNTVTTMSMVS 164
P NP +D DDS + P P + + T LD
Sbjct: 632 PLNPKEPWDREMDYDDS--------LSPEIPSQQPPEESLTEPQDSLDERR--------- 674
Query: 165 DVAAASVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKLVRNYNVQNAQYAQNTGSSSN 224
+AA + +S + S E D ELL +L NP+++ YA +G SN
Sbjct: 675 -IAAGAATTSSSLSSPEP----DLELLAALLKNPDLV-------------YALTSGKPSN 716
Query: 225 VFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQM-APTMST 266
+ V T + +++ SS + +PT ST
Sbjct: 717 LAGQDMVKLLDVIKTGAPNSSSSSNKQVEERVEVSLPSPTPST 759
>gb|AAF54383.1| CG16779-PA [Drosophila melanogaster] gi|24645378|ref|NP_649896.1|
CG16779-PA [Drosophila melanogaster]
Length = 1980
Score = 43.5 bits (101), Expect = 0.011
Identities = 63/277 (22%), Positives = 107/277 (37%), Gaps = 54/277 (19%)
Query: 138 DGDVGADTLSPGILDGSNTVTTMSMVSDVAAASVALT-----------SLVKSSEHGNLI 186
+G V L+ + T T + + AAA+ T S ++++
Sbjct: 9 EGSVTLQLRDANALEAAATKTATAAAAAAAAAAATSTTSPNGVAGAPASTLENALTIGYP 68
Query: 187 DPELLNDILNNPEVIEKLVRNYNVQNAQYAQNTGSSSNVFSHPPNP---------FNQVE 237
DPE+L D+L + ++N N A + N+ + S +H NP + V
Sbjct: 69 DPEMLADVLGTIQTAS--LKNNNSITAATSSNSSTKSTSSNHLTNPNKITIKRRSVHSVS 126
Query: 238 TTTSSSNAFS-STSSYTHTTGGQMAPTMSTQWHRRPEISSAI--AATPVEVPSTKDVNYY 294
T+T+SS+ S S+SS + +G + R S+ + T ++ S +
Sbjct: 127 TSTNSSSISSCSSSSSSSNSGKSNTSYIKNCLIRSSSCSNTVTNVTTLAQIMSNSSTSSA 186
Query: 295 KSLIQQHGGDKQEALPYSSSNRQNQQPLSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCR 354
SL+ QH ++SN N S +V + + GS +SS C
Sbjct: 187 ASLLNQHN---------NNSNCSNSSNFSTASSVGSSISVGSN----------SSSSNCS 227
Query: 355 NGANCTFQ---------HDASFQPQQGN-PSSGMHSS 381
NG+N H SF+ + P+SG+ SS
Sbjct: 228 NGSNSNSNDSNSSSGGGHRLSFKGTGRHVPASGLSSS 264
>gb|AAC47851.1| CG1 [Plasmodium falciparum] gi|7494270|pir||T09076 hypothetical
protein CG1 (strain HB3) - malaria parasite (Plasmodium
falciparum)
Length = 950
Score = 42.7 bits (99), Expect = 0.019
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 147 SPGILDGSNTVTTMSMVS-DVAAASVALTSLVKSSEHGNLIDPELLN--DILNNPEVIEK 203
SP L NT+++ + +S + ++S L+S S L P L+ + L++P +
Sbjct: 366 SPNTLSSPNTLSSSNTLSPNTLSSSNRLSSPNTLSSPNTLSSPNTLSSPNTLSSPNTLSS 425
Query: 204 LVRNYNVQNAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPT 263
+ N + NT SSN FS PN F SS N SYT ++
Sbjct: 426 -PNTLSSSNRLSSPNTLPSSNTFSSAPNLF------PSSFNV-----SYTPFYITSLSAY 473
Query: 264 MSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDK 305
S+ H P +S+ I P+EV + ++YK+L G K
Sbjct: 474 FSSSAHHMPYVSTYIIDKPLEVLKYGNGSFYKALAFDLKGGK 515
>emb|CAH00517.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
gi|50306891|ref|XP_453421.1| unnamed protein product
[Kluyveromyces lactis]
Length = 554
Score = 41.6 bits (96), Expect = 0.042
Identities = 57/220 (25%), Positives = 94/220 (41%), Gaps = 26/220 (11%)
Query: 146 LSPGILDGSN-------TVTTMSMV---SDVAAASVALTSLVKSSEHGNLIDPELLNDIL 195
L+P ++ N TV T +V ++++A VALTS S P +LN +L
Sbjct: 176 LTPAVMSNGNNNPSNNPTVPTNEIVPGQNNLSAIPVALTS--SSGLTPGRFTP-MLNSLL 232
Query: 196 NNP--EVIEKLVRNYN-VQNAQYAQ---NTGSSSNVFSHPPNPFNQVETTTSSSNAFSST 249
N P E + +V N + NA NT S+N N + SSSN +
Sbjct: 233 NMPSEEPVFPMVNGSNSINNANINSSNVNTIDSNNQAKDESNTSYSNRSPNSSSNNSNIL 292
Query: 250 SSYTHTTGGQMAPTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEAL 309
S++++TT M+ +Q +I PVE+ T N S+ + + + +
Sbjct: 293 STHSNTTHSLMS-NHPSQVILAADIPLDKVKNPVEIMKTVYSNSNSSITYNNSNNSEPSQ 351
Query: 310 PYSSSNRQNQQPLSNYDTVHNFRAK------GSKPKISKP 343
++ Q+Q+ S +T N A+ G+ K+SKP
Sbjct: 352 SKNAITSQSQRKSSTNNTASNEPAESKENVNGTSSKVSKP 391
>gb|AAC47850.1| CG1 [Plasmodium falciparum]
Length = 939
Score = 41.2 bits (95), Expect = 0.055
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 155 NTVTTMSMVSDVAAASVA--------LTSLVKSSEHGNLIDPELLNDI--LNNPEVIEKL 204
N++TT + SD S + L+S + S L P L+ L++P +
Sbjct: 344 NSMTTPNNTSDTKGVSSSNTLSSSNTLSSSNRLSSPNTLSSPNTLSSSNRLSSPNTLSS- 402
Query: 205 VRNYNVQNAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTS--SYTHTTGGQMAP 262
+ N + NT SSSN S P N T +S+ N F S+ SYT ++
Sbjct: 403 PNTLSSPNTLSSPNTLSSSNRLSSP-NTLPSSNTFSSAPNLFPSSFNVSYTPFYITSLSA 461
Query: 263 TMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDK 305
S+ H P +S+ I P+EV + ++YK+L G K
Sbjct: 462 YFSSSAHHMPYVSTYIIDKPLEVLKYGNGSFYKALAFDLKGGK 504
>emb|CAA09717.1| Muf1 protein [Kluyveromyces lactis]
Length = 554
Score = 40.8 bits (94), Expect = 0.072
Identities = 58/220 (26%), Positives = 93/220 (41%), Gaps = 26/220 (11%)
Query: 146 LSPGILDGSN-------TVTTMSMV---SDVAAASVALTSLVKSSEHGNLIDPELLNDIL 195
L+P ++ N TV T +V ++++A VALTS S P +LN +L
Sbjct: 176 LTPAVMSNGNNNPSNNPTVPTNEIVPGQNNLSAIPVALTS--SSGLTPGRFTP-MLNSLL 232
Query: 196 NNP--EVIEKLVRNYN-VQNAQYAQ---NTGSSSNVFSHPPNPFNQVETTTSSSNAFSST 249
N P E + +V N + NA NT S+N N + SSSN +
Sbjct: 233 NMPSEEPVFPMVNGSNSINNANINSSNVNTIDSNNQAKDESNTSYSNRSPNSSSNNSNIL 292
Query: 250 SSYTHTTGGQMAPTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEAL 309
S+++ TT M+ S Q +I PVE+ T N S+ + + + +
Sbjct: 293 STHSSTTHSLMSNHPS-QVILAADIPLDKVKNPVEIMKTVYSNSNSSITYNNSNNSEPSQ 351
Query: 310 PYSSSNRQNQQPLSNYDTVHNFRAK------GSKPKISKP 343
++ Q+Q+ S +T N A+ G+ K+SKP
Sbjct: 352 SKNAITSQSQRKSSTNNTASNEPAESKENVNGTSSKVSKP 391
>gb|AAC47840.1| CG1 [Plasmodium falciparum]
Length = 939
Score = 40.8 bits (94), Expect = 0.072
Identities = 45/163 (27%), Positives = 69/163 (41%), Gaps = 14/163 (8%)
Query: 155 NTVTTMSMVSDVAAASVA--------LTSLVKSSEHGNLIDPELLNDI--LNNPEVIEKL 204
N++TT + SD S + L+S + S L P L+ L++P +
Sbjct: 344 NSMTTPNNTSDTKGVSSSNTLSSSNTLSSSNRLSSPNTLSSPNTLSSSNRLSSPNTLSSS 403
Query: 205 VRNYNVQNAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTS--SYTHTTGGQMAP 262
N + NT SSSN S P N T +S+ N F S+ SYT ++
Sbjct: 404 -NTLPSSNTLSSSNTLSSSNRLSSP-NTLPSSNTFSSAPNLFPSSFNVSYTPFYITSLSA 461
Query: 263 TMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDK 305
S+ H P +S+ I P+EV + ++YK+L G K
Sbjct: 462 YFSSSAHHMPYVSTYIIDKPLEVLKYGNGSFYKALAFDLKGGK 504
>gb|AAK01470.1| floral homeotic protein HUA1 [Arabidopsis thaliana]
gi|22331028|ref|NP_187874.2| floral homeotic protein
(HUA1) [Arabidopsis thaliana]
Length = 524
Score = 40.4 bits (93), Expect = 0.094
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 26/174 (14%)
Query: 204 LVRNYNVQNAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPT 263
L R+ + + Y+ SSS+++ H PN TT+S A+ Q+
Sbjct: 59 LARDGSEALSNYSGTLASSSSMYHHLPN-------TTASHLAYP-----------QLLQH 100
Query: 264 MSTQWHRRPEI---SSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQ 320
W E+ +SA+ P V T + YY +L+ H Q Y++ +
Sbjct: 101 QEVAWPPGVEVPGAASAVEPLPPGVKRTSEALYYPTLLGAHNTIGQTEAWYTTDYFTKRP 160
Query: 321 PLSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNP 374
L + + + + + K C + +R C+ G +C F H + P+ G P
Sbjct: 161 KLESTSHLPIYPQRAGE----KDCTHYMQTRTCKFGESCRFDHPI-WVPEGGIP 209
>ref|XP_489144.1| PREDICTED: hypothetical protein XP_489144 [Mus musculus]
Length = 485
Score = 40.4 bits (93), Expect = 0.094
Identities = 63/266 (23%), Positives = 104/266 (38%), Gaps = 39/266 (14%)
Query: 140 DVGADTLSPGILDGSNTVTTMSMVSDVAAASVALTSLVKSSEHGNLIDPELLNDILNNPE 199
+ G+ +LS + S T S S + +S S ++ S G++ + + N+
Sbjct: 117 NTGSSSLSSSSSNSSRPSNTGSSSSSSSNSSNISNSSIRPSNRGSISNYD------NSSN 170
Query: 200 VIEKLVRNYNVQNAQYAQNTGSSSNVFSHPPNPFNQV------------ETTTSSSNAFS 247
+ N+ N + NTGSSSN + P P N V TT+SSN+ S
Sbjct: 171 SSSPQPSSGNISNRR-PSNTGSSSNQVNSGPRPGNTVNISNYSNSGPRPSNTTTSSNSQS 229
Query: 248 STSSYTHTTGG-QMAPTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQ 306
++S G S + R IS+ + ST+ N ++ I +G
Sbjct: 230 NSSPRPSNRGSISNYSNSSLRPSNRGNISN------YDNSSTRPSN--RANISNYGNSSN 281
Query: 307 EALPYSSSNRQNQQPLSNYDTVHNFRAKGSKP----KIS-------KPCIFFNSSRGCRN 355
+ P SS++ + + SN + N G +P IS +P +SS N
Sbjct: 282 SSSPQPSSSKISNRRPSNTGSSSNQVNSGPRPGNTVNISNYSNSGPRPSNTTSSSNSQSN 341
Query: 356 GANCTFQHDASFQPQQGNPSSGMHSS 381
+ + D+S P + SS SS
Sbjct: 342 SSPRSSNTDSSSSPGNSHTSSSSSSS 367
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.128 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 706,308,682
Number of Sequences: 2540612
Number of extensions: 30638471
Number of successful extensions: 85625
Number of sequences better than 10.0: 269
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 84765
Number of HSP's gapped (non-prelim): 673
length of query: 391
length of database: 863,360,394
effective HSP length: 130
effective length of query: 261
effective length of database: 533,080,834
effective search space: 139134097674
effective search space used: 139134097674
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 76 (33.9 bits)
Medicago: description of AC148486.12