BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148485.5 + phase: 0
(102 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 130 6e-30
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 130 6e-30
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 130 6e-30
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 128 3e-29
ref|NP_176623.2| hypothetical protein [Arabidopsis thaliana] 128 3e-29
ref|XP_463203.1| putative helicase [Oryza sativa (japonica culti... 127 5e-29
dbj|BAD35649.1| helicase-like protein [Oryza sativa (japonica cu... 127 5e-29
ref|XP_467173.1| helicase-like protein [Oryza sativa (japonica c... 126 1e-28
gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cult... 126 1e-28
ref|XP_550305.1| helicase-like protein [Oryza sativa (japonica c... 126 1e-28
ref|NP_916487.1| helicase-like protein [Oryza sativa (japonica c... 126 1e-28
gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultiva... 126 1e-28
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 125 2e-28
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 125 2e-28
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 125 3e-28
emb|CAB81576.1| putative protein [Arabidopsis thaliana] gi|15229... 124 6e-28
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 124 7e-28
gb|AAP52578.1| putative helicase [Oryza sativa (japonica cultiva... 123 1e-27
gb|AAP52492.1| putative DNA helicase homolog [Oryza sativa (japo... 123 1e-27
gb|AAN09850.1| putative helicase, 3'-partial [Oryza sativa (japo... 123 1e-27
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 130 bits (328), Expect = 6e-30
Identities = 62/102 (60%), Positives = 79/102 (76%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
ML+RN+DQ GLCNGTRL + LG VI A+V+ G++AG VY+PR+ L P+ + F
Sbjct: 1162 MLIRNLDQKYGLCNGTRLQVTQLGDRVIEAKVLTGSNAGNKVYLPRLVLTPADFRIPFRF 1221
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
+RRQFP+V F MTINKSQGQ+L+ VG+YLPRPVF+HGQLYV
Sbjct: 1222 QRRQFPVVPCFGMTINKSQGQSLSHVGIYLPRPVFSHGQLYV 1263
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 130 bits (328), Expect = 6e-30
Identities = 63/102 (61%), Positives = 78/102 (75%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN++Q+SGLCNGTR+ I LGK I A++I G H GE VYIPR+ + P+ +
Sbjct: 1498 MLLRNINQSSGLCNGTRMTITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLL 1557
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
+RRQ+PL + FAMTINKSQGQ+L VGLYLP+ VFTHGQLYV
Sbjct: 1558 KRRQYPLSVCFAMTINKSQGQSLNMVGLYLPKQVFTHGQLYV 1599
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 130 bits (328), Expect = 6e-30
Identities = 63/102 (61%), Positives = 78/102 (75%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN++Q+SGLCNGTR+ I LGK I A++I G H GE VYIPR+ + P+ +
Sbjct: 1389 MLLRNINQSSGLCNGTRMTITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLL 1448
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
+RRQ+PL + FAMTINKSQGQ+L VGLYLP+ VFTHGQLYV
Sbjct: 1449 KRRQYPLSVCFAMTINKSQGQSLNMVGLYLPKQVFTHGQLYV 1490
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 128 bits (322), Expect = 3e-29
Identities = 64/102 (62%), Positives = 74/102 (71%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN+D GLCNGTRL + + VI AR I G G++V IPRM + PS +
Sbjct: 881 MLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTRLPFKM 940
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
RRQFPL ++FAMTINKSQGQTL SVGLYLPRPVF+HGQLYV
Sbjct: 941 RRRQFPLSVAFAMTINKSQGQTLESVGLYLPRPVFSHGQLYV 982
>ref|NP_176623.2| hypothetical protein [Arabidopsis thaliana]
Length = 1231
Score = 128 bits (322), Expect = 3e-29
Identities = 64/102 (62%), Positives = 74/102 (71%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN+D GLCNGTRL + + VI AR I G G++V IPRM + PS +
Sbjct: 1097 MLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTRLPFKM 1156
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
RRQFPL ++FAMTINKSQGQTL SVGLYLPRPVF+HGQLYV
Sbjct: 1157 RRRQFPLSVAFAMTINKSQGQTLESVGLYLPRPVFSHGQLYV 1198
>ref|XP_463203.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|28201555|gb|AAO34493.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1629
Score = 127 bits (320), Expect = 5e-29
Identities = 60/103 (58%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANV-SIT 59
MLLRN+D A+GLCNGTRL++ GKN I A ++ G HAG+ V++PR+ L PS +
Sbjct: 1466 MLLRNIDPANGLCNGTRLVVRQFGKNAIDAEIVVGQHAGKRVFLPRIPLCPSDDEMFPFR 1525
Query: 60 FERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
F+R+QFP+ LSFA+TINK+QGQT+ + G+YLP PVF+HGQLYV
Sbjct: 1526 FKRKQFPVRLSFALTINKAQGQTIPNAGVYLPEPVFSHGQLYV 1568
>dbj|BAD35649.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|51090733|dbj|BAD35213.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 193
Score = 127 bits (320), Expect = 5e-29
Identities = 62/103 (60%), Positives = 83/103 (80%), Gaps = 1/103 (0%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSG-ANVSIT 59
+LLRN+D ++GLCNGTRL+I + N I A ++GG HA + V+IPR++L PS ++S
Sbjct: 53 ILLRNLDPSNGLCNGTRLMIRAFQDNAIDAEIVGGNHARKRVFIPRISLSPSDDISLSFK 112
Query: 60 FERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
F+R+QFP+ LSFAMTINKSQGQT+ +VG+YLP PVF+HGQLYV
Sbjct: 113 FKRKQFPIRLSFAMTINKSQGQTILNVGIYLPEPVFSHGQLYV 155
>ref|XP_467173.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|50251743|dbj|BAD27676.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|49388509|dbj|BAD25633.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 193
Score = 126 bits (317), Expect = 1e-28
Identities = 62/103 (60%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSG-ANVSIT 59
+LLRN+D +GLCNGTRL+I + N I A ++GG HA + V+IPR++L PS ++S
Sbjct: 53 ILLRNLDPNNGLCNGTRLMIRAFQDNAIDAEIVGGHHARKRVFIPRISLSPSDDISLSFK 112
Query: 60 FERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
F+R+QFP+ LSFAMTINKSQGQT+ +VG+YLP PVF+HGQLYV
Sbjct: 113 FKRKQFPIRLSFAMTINKSQGQTIPNVGIYLPEPVFSHGQLYV 155
>gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37535030|ref|NP_921817.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1477
Score = 126 bits (316), Expect = 1e-28
Identities = 61/102 (59%), Positives = 77/102 (74%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN++Q++GLCNGTR+ I LG VI A++I G H+G++V IP++ + P+
Sbjct: 1340 MLLRNINQSAGLCNGTRMTITRLGNKVIEAQIITGTHSGDMVCIPQIIMSPTEPKWPFML 1399
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
R+QFPL + FAMTINKSQGQTL VGLYLPR VFTHGQLYV
Sbjct: 1400 NRKQFPLSVCFAMTINKSQGQTLNKVGLYLPRQVFTHGQLYV 1441
>ref|XP_550305.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|55296801|dbj|BAD68127.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1427
Score = 126 bits (316), Expect = 1e-28
Identities = 62/102 (60%), Positives = 76/102 (73%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
+LLRN++Q GLCNGTRLII +LG N+I +I G H GE YIPR+NL G T
Sbjct: 1286 ILLRNLNQNLGLCNGTRLIITNLGDNIIEGIIITGTHIGEKAYIPRINLTTRGNQWPFTL 1345
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
RR FP+ + ++MTINKSQGQTL++VGLYL +PVFTHGQLYV
Sbjct: 1346 CRRHFPIKVCYSMTINKSQGQTLSNVGLYLKKPVFTHGQLYV 1387
>ref|NP_916487.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 1602
Score = 126 bits (316), Expect = 1e-28
Identities = 62/102 (60%), Positives = 76/102 (73%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
+LLRN++Q GLCNGTRLII +LG N+I +I G H GE YIPR+NL G T
Sbjct: 1461 ILLRNLNQNLGLCNGTRLIITNLGDNIIEGIIITGTHIGEKAYIPRINLTTRGNQWPFTL 1520
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
RR FP+ + ++MTINKSQGQTL++VGLYL +PVFTHGQLYV
Sbjct: 1521 CRRHFPIKVCYSMTINKSQGQTLSNVGLYLKKPVFTHGQLYV 1562
>gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1501
Score = 126 bits (316), Expect = 1e-28
Identities = 61/102 (59%), Positives = 77/102 (74%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN++Q++GLCNGTR+ I LG VI A++I G H+G++V IP++ + P+
Sbjct: 1364 MLLRNINQSAGLCNGTRMTITRLGNKVIEAQIITGTHSGDMVCIPQIIMSPTEPKWPFML 1423
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
R+QFPL + FAMTINKSQGQTL VGLYLPR VFTHGQLYV
Sbjct: 1424 NRKQFPLSVCFAMTINKSQGQTLNKVGLYLPRQVFTHGQLYV 1465
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 125 bits (315), Expect = 2e-28
Identities = 60/102 (58%), Positives = 75/102 (72%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN+D GLCNGTRL I L +++ A+VI G G++VYIP +N+ PS +
Sbjct: 1289 MLLRNLDPKGGLCNGTRLQITQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKM 1348
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
RRQFPL ++F MTINKSQGQ+L VGLYLP+PVF+HGQLYV
Sbjct: 1349 RRRQFPLSVAFVMTINKSQGQSLEQVGLYLPKPVFSHGQLYV 1390
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 125 bits (315), Expect = 2e-28
Identities = 60/102 (58%), Positives = 75/102 (72%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN+D GLCNGTRL I L +++ A+VI G G++VYIP +N+ PS +
Sbjct: 1280 MLLRNLDPKGGLCNGTRLQITQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKM 1339
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
RRQFPL ++F MTINKSQGQ+L VGLYLP+PVF+HGQLYV
Sbjct: 1340 RRRQFPLSVAFVMTINKSQGQSLEQVGLYLPKPVFSHGQLYV 1381
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 125 bits (314), Expect = 3e-28
Identities = 62/102 (60%), Positives = 74/102 (71%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN+D GLCNGTRL I L K V+ A+VI G++V IP +NL PS +
Sbjct: 1612 MLLRNLDPKGGLCNGTRLQITQLAKQVVQAKVITRDRIGDIVLIPLINLTPSDTKLPFKM 1671
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
RRQFPL ++FAMTINKSQGQ+L VGLYLP+PVF+HGQLYV
Sbjct: 1672 RRRQFPLSVAFAMTINKSQGQSLEQVGLYLPKPVFSHGQLYV 1713
>emb|CAB81576.1| putative protein [Arabidopsis thaliana]
gi|15229268|ref|NP_189921.1| helicase-related
[Arabidopsis thaliana] gi|11358366|pir||T47377
hypothetical protein T5C2.50 - Arabidopsis thaliana
Length = 830
Score = 124 bits (311), Expect = 6e-28
Identities = 62/102 (60%), Positives = 73/102 (70%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN+D GLCNGTRL + + VI AR I G G++V IPRM + PS +
Sbjct: 599 MLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTRLPFKM 658
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
R+QF L ++FAMTINKSQGQTL SVGLYLPRPVF+HGQLYV
Sbjct: 659 RRKQFALSVAFAMTINKSQGQTLESVGLYLPRPVFSHGQLYV 700
Score = 122 bits (305), Expect = 3e-27
Identities = 61/102 (59%), Positives = 72/102 (69%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN+D GLCNGTRL + + VI AR I G G++V IPRM + P +
Sbjct: 715 MLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPLDTRLPFKM 774
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
R+QF L ++FAMTINKSQGQTL SVGLYLPRPVF+HGQLYV
Sbjct: 775 RRKQFALSVAFAMTINKSQGQTLESVGLYLPRPVFSHGQLYV 816
Score = 80.9 bits (198), Expect = 7e-15
Identities = 48/102 (47%), Positives = 54/102 (52%), Gaps = 35/102 (34%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN+D GLCNGTRL + + +I AR I
Sbjct: 518 MLLRNMDPNKGLCNGTRLQVTQMTDTIIQARFI--------------------------- 550
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
+FAMTINKSQGQTL SVGLYLPRPVF+HGQLYV
Sbjct: 551 --------TAFAMTINKSQGQTLESVGLYLPRPVFSHGQLYV 584
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 124 bits (310), Expect = 7e-28
Identities = 61/102 (59%), Positives = 74/102 (71%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANVSITF 60
MLLRN++Q +GLCNGTR+ I GK VI A +I G H G++V IP++ + P+
Sbjct: 1436 MLLRNINQNAGLCNGTRMRITRFGKRVIEAEIITGTHIGDMVCIPQIIMSPNERKWPFVL 1495
Query: 61 ERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
R+QFPL + FAMTINKSQGQTL VGLYLPR VFTHGQLYV
Sbjct: 1496 NRKQFPLSVCFAMTINKSQGQTLNKVGLYLPRQVFTHGQLYV 1537
>gb|AAP52578.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37531978|ref|NP_920291.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1443
Score = 123 bits (309), Expect = 1e-27
Identities = 59/103 (57%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANV-SIT 59
+LLRN+D A+GLCNGTRL++ +N I A ++ G HAG+ V++PR+ L PS +
Sbjct: 1298 ILLRNIDPANGLCNGTRLVVRGFQRNTIDAEIVLGQHAGKRVFLPRIPLCPSDDEMFPFR 1357
Query: 60 FERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
F+R+QFP+ LSFAMTINK+QGQT+ +VG+YLP PVF+HGQLYV
Sbjct: 1358 FKRKQFPVRLSFAMTINKAQGQTIPNVGVYLPDPVFSHGQLYV 1400
>gb|AAP52492.1| putative DNA helicase homolog [Oryza sativa (japonica
cultivar-group)] gi|37531806|ref|NP_920205.1| putative
DNA helicase homolog [Oryza sativa (japonica
cultivar-group)] gi|22128687|gb|AAM92800.1| putative DNA
helicase homolog [Oryza sativa (japonica cultivar-group)]
Length = 1443
Score = 123 bits (309), Expect = 1e-27
Identities = 59/103 (57%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANV-SIT 59
+LLRN+D A+GLCNGTRL++ +N I A ++ G HAG+ V++PR+ L PS +
Sbjct: 1298 ILLRNIDPANGLCNGTRLVVRGFQRNTIDAEIVLGQHAGKRVFLPRIPLCPSDDEMFPFR 1357
Query: 60 FERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
F+R+QFP+ LSFAMTINK+QGQT+ +VG+YLP PVF+HGQLYV
Sbjct: 1358 FKRKQFPVRLSFAMTINKAQGQTIPNVGVYLPDPVFSHGQLYV 1400
>gb|AAN09850.1| putative helicase, 3'-partial [Oryza sativa (japonica
cultivar-group)]
Length = 1415
Score = 123 bits (309), Expect = 1e-27
Identities = 59/103 (57%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Query: 1 MLLRNVDQASGLCNGTRLIIVSLGKNVICARVIGGAHAGEVVYIPRMNLIPSGANV-SIT 59
+LLRN+D A+GLCNGTRL++ +N I A ++ G HAG+ V++PR+ L PS +
Sbjct: 1298 ILLRNIDPANGLCNGTRLVVRGFQRNTIDAEIVLGQHAGKRVFLPRIPLCPSDDEMFPFR 1357
Query: 60 FERRQFPLVLSFAMTINKSQGQTLTSVGLYLPRPVFTHGQLYV 102
F+R+QFP+ LSFAMTINK+QGQT+ +VG+YLP PVF+HGQLYV
Sbjct: 1358 FKRKQFPVRLSFAMTINKAQGQTIPNVGVYLPDPVFSHGQLYV 1400
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.141 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,441,273
Number of Sequences: 2540612
Number of extensions: 5636569
Number of successful extensions: 14481
Number of sequences better than 10.0: 208
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 14250
Number of HSP's gapped (non-prelim): 223
length of query: 102
length of database: 863,360,394
effective HSP length: 78
effective length of query: 24
effective length of database: 665,192,658
effective search space: 15964623792
effective search space used: 15964623792
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)
Medicago: description of AC148485.5