BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148485.1 - phase: 0
(55 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC19183.2| alpha-expansin [Cicer arietinum] 111 4e-24
gb|AAM89261.1| expansin 3 [Malus x domestica] 108 3e-23
dbj|BAD00013.1| expansin [Malus x domestica] 108 3e-23
dbj|BAD00016.1| expansin [Malus x domestica] 108 5e-23
gb|AAM46999.1| alpha-expansin precursor [Gossypium hirsutum] 106 1e-22
dbj|BAA95756.1| expansin-like protein [Arabidopsis thaliana] gi|... 104 5e-22
gb|AAM22628.1| expansin 14 precursor [Rumex palustris] 98 5e-20
gb|AAM22627.1| expansin 13 precursor [Rumex palustris] 98 5e-20
gb|AAM22632.1| expansin 18 precursor [Rumex palustris] 97 1e-19
gb|AAM47002.1| alpha-expansin precursor [Gossypium hirsutum] 96 3e-19
gb|AAR09170.1| alpha-expansin 3 [Populus tremula x Populus tremu... 96 3e-19
dbj|BAC66694.1| expansin [Vitis labrusca x Vitis vinifera] 96 3e-19
dbj|BAC66786.1| expansin [Prunus persica] 95 4e-19
gb|AAC96080.1| alpha-expansin precursor [Nicotiana tabacum] 95 4e-19
gb|AAU90318.1| alpha-expansin precursor [Solanum demissum] 95 6e-19
gb|AAM12782.1| putative expansin [Capsicum annuum] 95 6e-19
gb|AAD13633.1| expansin precursor [Lycopersicon esculentum] 95 6e-19
gb|AAF35902.1| expansin 3 [Zinnia elegans] 94 7e-19
emb|CAD33924.1| alpha-expansin 4 [Cicer arietinum] 94 1e-18
dbj|BAC67191.1| expansin [Pyrus communis] 94 1e-18
>emb|CAC19183.2| alpha-expansin [Cicer arietinum]
Length = 245
Score = 111 bits (278), Expect = 4e-24
Identities = 50/55 (90%), Positives = 51/55 (91%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQFLY 55
MSRNWGQNWQSNSYLNGQSLSFVVTT NGHS+VSFN AP SWSFGQTYTGRQF Y
Sbjct: 191 MSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSFNAAPSSWSFGQTYTGRQFNY 245
>gb|AAM89261.1| expansin 3 [Malus x domestica]
Length = 241
Score = 108 bits (271), Expect = 3e-23
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQFLY 55
MSRNWGQNWQSNSYLNGQSLSF+VTT +G +VS+NVAPP+WSFGQTYTGRQFLY
Sbjct: 187 MSRNWGQNWQSNSYLNGQSLSFIVTTSDGRRLVSYNVAPPNWSFGQTYTGRQFLY 241
>dbj|BAD00013.1| expansin [Malus x domestica]
Length = 214
Score = 108 bits (271), Expect = 3e-23
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQFLY 55
MSRNWGQNWQSNSYLNGQSLSF+VTT +G +VS+NVAPP+WSFGQTYTGRQFLY
Sbjct: 160 MSRNWGQNWQSNSYLNGQSLSFIVTTSDGRRLVSYNVAPPNWSFGQTYTGRQFLY 214
>dbj|BAD00016.1| expansin [Malus x domestica]
Length = 214
Score = 108 bits (269), Expect = 5e-23
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQFLY 55
MSRNWGQNWQSNSYLNGQSLSF+VTT +G +VS+NVAPP+WSFGQTYTGRQFLY
Sbjct: 160 MSRNWGQNWQSNSYLNGQSLSFLVTTSDGRRLVSYNVAPPNWSFGQTYTGRQFLY 214
>gb|AAM46999.1| alpha-expansin precursor [Gossypium hirsutum]
Length = 244
Score = 106 bits (265), Expect = 1e-22
Identities = 47/53 (88%), Positives = 50/53 (93%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSNSYLNGQSLSF+VTT NGHS+VSF+VAP SWSFGQTYTG QF
Sbjct: 187 MSRNWGQNWQSNSYLNGQSLSFIVTTSNGHSVVSFDVAPSSWSFGQTYTGGQF 239
>dbj|BAA95756.1| expansin-like protein [Arabidopsis thaliana]
gi|1041704|gb|AAB38071.1| expansin At-EXPA5 [Arabidopsis
thaliana] gi|15228564|ref|NP_189545.1| expansin,
putative (EXP5) [Arabidopsis thaliana]
gi|11281295|pir||T50655 expansin EXP5 [imported] -
Arabidopsis thaliana gi|20138196|sp|Q38864|EXP5_ARATH
Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)
(Ath-ExpAlpha-1.4)
Length = 255
Score = 104 bits (260), Expect = 5e-22
Identities = 47/55 (85%), Positives = 50/55 (90%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQFLY 55
MSRNWGQNWQSNSYLNGQSLSFVVTT + S+VSFNVAPP+WSFGQTYTG QF Y
Sbjct: 201 MSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFRY 255
>gb|AAM22628.1| expansin 14 precursor [Rumex palustris]
Length = 250
Score = 98.2 bits (243), Expect = 5e-20
Identities = 43/53 (81%), Positives = 47/53 (88%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSNSY+NGQSLSF VTT +GHS+VS NVAP W+FGQTYTG QF
Sbjct: 197 MSRNWGQNWQSNSYMNGQSLSFKVTTSDGHSVVSNNVAPSGWTFGQTYTGAQF 249
>gb|AAM22627.1| expansin 13 precursor [Rumex palustris]
Length = 250
Score = 98.2 bits (243), Expect = 5e-20
Identities = 43/53 (81%), Positives = 47/53 (88%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSNSY+NGQSLSF VTT +GHS+VS NVAP W+FGQTYTG QF
Sbjct: 197 MSRNWGQNWQSNSYMNGQSLSFKVTTSDGHSVVSNNVAPSGWTFGQTYTGAQF 249
>gb|AAM22632.1| expansin 18 precursor [Rumex palustris]
Length = 250
Score = 97.1 bits (240), Expect = 1e-19
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSN+Y+NGQSLSF VTT +GHS+VS NVAP W+FGQTYTG QF
Sbjct: 197 MSRNWGQNWQSNTYMNGQSLSFKVTTSDGHSVVSNNVAPSGWTFGQTYTGAQF 249
>gb|AAM47002.1| alpha-expansin precursor [Gossypium hirsutum]
Length = 248
Score = 95.9 bits (237), Expect = 3e-19
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSN+YLNGQSLSF VTT +G ++VS NVAP WSFGQT+TGRQF
Sbjct: 195 MSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVVSSNVAPAGWSFGQTFTGRQF 247
>gb|AAR09170.1| alpha-expansin 3 [Populus tremula x Populus tremuloides]
Length = 249
Score = 95.5 bits (236), Expect = 3e-19
Identities = 41/53 (77%), Positives = 48/53 (90%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSN+YLNGQSLSF VTT +G ++VS+NVAP SWSFGQT++G QF
Sbjct: 196 MSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFGQTFSGAQF 248
>dbj|BAC66694.1| expansin [Vitis labrusca x Vitis vinifera]
Length = 246
Score = 95.5 bits (236), Expect = 3e-19
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSN+YLNGQSLSF VTT NGH+IVS+N P WSFGQT++G QF
Sbjct: 193 MSRNWGQNWQSNTYLNGQSLSFKVTTSNGHTIVSYNCVPAHWSFGQTFSGAQF 245
>dbj|BAC66786.1| expansin [Prunus persica]
Length = 252
Score = 95.1 bits (235), Expect = 4e-19
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSNSYLNGQSLSF VTT +G ++VS+N AP WSFGQTY+G QF
Sbjct: 199 MSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGWSFGQTYSGAQF 251
>gb|AAC96080.1| alpha-expansin precursor [Nicotiana tabacum]
Length = 249
Score = 95.1 bits (235), Expect = 4e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQ+N+YLNGQ+LSF VTTG+G S++S+NVAP WSFG TYTG QF
Sbjct: 196 MSRNWGQNWQNNNYLNGQTLSFKVTTGDGRSLISYNVAPAHWSFGHTYTGAQF 248
>gb|AAU90318.1| alpha-expansin precursor [Solanum demissum]
Length = 249
Score = 94.7 bits (234), Expect = 6e-19
Identities = 41/53 (77%), Positives = 47/53 (88%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSN+ LNGQ+LSF VTTG+G S++S+NVAP WSFGQTYTG QF
Sbjct: 196 MSRNWGQNWQSNNNLNGQTLSFKVTTGDGRSLISYNVAPAHWSFGQTYTGAQF 248
>gb|AAM12782.1| putative expansin [Capsicum annuum]
Length = 239
Score = 94.7 bits (234), Expect = 6e-19
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQ+N+YLNGQSLSF VTTG+G ++VS+N AP SWSFGQT++G QF
Sbjct: 186 MSRNWGQNWQNNAYLNGQSLSFKVTTGDGRTVVSYNAAPSSWSFGQTFSGGQF 238
>gb|AAD13633.1| expansin precursor [Lycopersicon esculentum]
Length = 239
Score = 94.7 bits (234), Expect = 6e-19
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQ+N+YLNGQSLSF VTTG+G ++VS+N AP SWSFGQT++G QF
Sbjct: 186 MSRNWGQNWQNNAYLNGQSLSFKVTTGDGRTVVSYNAAPSSWSFGQTFSGGQF 238
>gb|AAF35902.1| expansin 3 [Zinnia elegans]
Length = 242
Score = 94.4 bits (233), Expect = 7e-19
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSNSYLNGQSLSF VTT +G ++VS+NVAP WSFGQT+ G QF
Sbjct: 189 MSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNVAPSRWSFGQTFAGAQF 241
>emb|CAD33924.1| alpha-expansin 4 [Cicer arietinum]
Length = 248
Score = 94.0 bits (232), Expect = 1e-18
Identities = 42/53 (79%), Positives = 46/53 (86%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSN+YLNGQSLSF VTT +G +IV+ NVAP WSFGQTYTG QF
Sbjct: 195 MSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTIVANNVAPAGWSFGQTYTGAQF 247
>dbj|BAC67191.1| expansin [Pyrus communis]
Length = 252
Score = 94.0 bits (232), Expect = 1e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Query: 1 MSRNWGQNWQSNSYLNGQSLSFVVTTGNGHSIVSFNVAPPSWSFGQTYTGRQF 53
MSRNWGQNWQSNSYLNGQ+LSF VTT +G ++VS+N AP WSFGQTY+G QF
Sbjct: 199 MSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSYNAAPAGWSFGQTYSGAQF 251
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.130 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,004,167
Number of Sequences: 2540612
Number of extensions: 3232733
Number of successful extensions: 7081
Number of sequences better than 10.0: 280
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6794
Number of HSP's gapped (non-prelim): 283
length of query: 55
length of database: 863,360,394
effective HSP length: 31
effective length of query: 24
effective length of database: 784,601,422
effective search space: 18830434128
effective search space used: 18830434128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Medicago: description of AC148485.1