BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148483.13 + phase: 0
(63 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAW39027.1| putative zinc finger protein [Oryza sativa (japon... 120 9e-27
gb|AAO66537.1| putative zinc finger protein [Oryza sativa (japon... 120 9e-27
gb|AAM91272.1| zinc finger protein Glo3-like [Arabidopsis thalia... 119 3e-26
gb|AAN41368.1| unknown protein [Arabidopsis thaliana] gi|6232009... 116 1e-25
emb|CAB78791.1| putative protein [Arabidopsis thaliana] gi|28945... 116 1e-25
gb|AAM62820.1| zinc finger protein Glo3-like [Arabidopsis thalia... 116 1e-25
gb|AAK25887.1| unknown protein [Arabidopsis thaliana] 116 1e-25
ref|NP_973603.1| human Rev interacting-like family protein / hRI... 116 1e-25
dbj|BAD43015.1| unknown protein [Arabidopsis thaliana] 116 1e-25
gb|AAP55136.1| unknown protein [Oryza sativa (japonica cultivar-... 114 5e-25
ref|XP_315621.2| ENSANGP00000007262 [Anopheles gambiae str. PEST... 97 1e-19
ref|XP_421112.1| PREDICTED: similar to zinc finger protein 289, ... 96 2e-19
dbj|BAB26362.1| unnamed protein product [Mus musculus] 95 6e-19
ref|NP_076343.1| zinc finger protein 289 [Mus musculus] gi|96517... 95 6e-19
gb|AAH05495.1| Zinc finger protein 289 [Mus musculus] 95 6e-19
emb|CAG02441.1| unnamed protein product [Tetraodon nigroviridis] 95 6e-19
ref|NP_001016210.1| hypothetical protein LOC548964 [Xenopus trop... 94 7e-19
ref|XP_393119.2| PREDICTED: similar to ENSANGP00000007262 [Apis ... 94 9e-19
gb|AAH30148.1| Zinc finger protein 289, ID1 regulated [Homo sapi... 94 1e-18
gb|AAH90141.1| MGC97866 protein [Xenopus tropicalis] gi|62752016... 94 1e-18
>gb|AAW39027.1| putative zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 384
Score = 120 bits (301), Expect = 9e-27
Identities = 54/63 (85%), Positives = 59/63 (92%)
Query: 1 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
MA D+FTDKNAVFR+LK K ENK CFDC+AKNPTWASVTYGIFLC+DCSAVHRSLGVHI+
Sbjct: 1 MAFDAFTDKNAVFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHIT 60
Query: 61 FVR 63
FVR
Sbjct: 61 FVR 63
>gb|AAO66537.1| putative zinc finger protein [Oryza sativa (japonica
cultivar-group)] gi|50920175|ref|XP_470448.1| putative
zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 412
Score = 120 bits (301), Expect = 9e-27
Identities = 54/63 (85%), Positives = 59/63 (92%)
Query: 1 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
MA D+FTDKNAVFR+LK K ENK CFDC+AKNPTWASVTYGIFLC+DCSAVHRSLGVHI+
Sbjct: 1 MAFDAFTDKNAVFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHIT 60
Query: 61 FVR 63
FVR
Sbjct: 61 FVR 63
>gb|AAM91272.1| zinc finger protein Glo3-like [Arabidopsis thaliana]
gi|9758511|dbj|BAB08919.1| zinc finger protein
Glo3-like [Arabidopsis thaliana]
gi|20466454|gb|AAM20544.1| zinc finger protein
Glo3-like [Arabidopsis thaliana]
gi|15237500|ref|NP_199487.1| human Rev interacting-like
family protein / hRIP family protein [Arabidopsis
thaliana]
Length = 402
Score = 119 bits (297), Expect = 3e-26
Identities = 54/63 (85%), Positives = 59/63 (92%)
Query: 1 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
MA+++ TDKN VFRKLK+KSENK CFDC+AKNPTWASV YGIFLCIDCSAVHRSLGVHIS
Sbjct: 1 MATENLTDKNVVFRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHIS 60
Query: 61 FVR 63
FVR
Sbjct: 61 FVR 63
>gb|AAN41368.1| unknown protein [Arabidopsis thaliana]
gi|62320091|dbj|BAD94263.1| hypothetical protein
[Arabidopsis thaliana] gi|62319827|dbj|BAD93852.1|
hypothetical protein [Arabidopsis thaliana]
gi|18414983|ref|NP_567543.1| human Rev interacting-like
family protein / hRIP family protein [Arabidopsis
thaliana] gi|51971433|dbj|BAD44381.1| unknown protein
[Arabidopsis thaliana] gi|51970716|dbj|BAD44050.1|
unknown protein [Arabidopsis thaliana]
Length = 413
Score = 116 bits (291), Expect = 1e-25
Identities = 52/62 (83%), Positives = 58/62 (92%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
++D+ TDKN VFRKLK+KSENK CFDC+AKNPTWASVTYGIFLCIDCSA HR+LGVHISF
Sbjct: 5 SADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISF 64
Query: 62 VR 63
VR
Sbjct: 65 VR 66
>emb|CAB78791.1| putative protein [Arabidopsis thaliana]
gi|2894598|emb|CAA17132.1| putative protein
[Arabidopsis thaliana] gi|7487780|pir||T05075
hypothetical protein T6K21.70 - Arabidopsis thaliana
Length = 1082
Score = 116 bits (291), Expect = 1e-25
Identities = 52/62 (83%), Positives = 58/62 (92%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
++D+ TDKN VFRKLK+KSENK CFDC+AKNPTWASVTYGIFLCIDCSA HR+LGVHISF
Sbjct: 5 SADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISF 64
Query: 62 VR 63
VR
Sbjct: 65 VR 66
>gb|AAM62820.1| zinc finger protein Glo3-like [Arabidopsis thaliana]
gi|3668084|gb|AAC61816.1| expressed protein
[Arabidopsis thaliana] gi|25408361|pir||H84765
hypothetical protein At2g35210 [imported] - Arabidopsis
thaliana gi|18403775|ref|NP_565801.1| human Rev
interacting-like family protein / hRIP family protein
[Arabidopsis thaliana]
Length = 395
Score = 116 bits (291), Expect = 1e-25
Identities = 53/63 (84%), Positives = 58/63 (91%)
Query: 1 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
MAS++ DK +VF+KLK KS+NK CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS
Sbjct: 1 MASENLNDKISVFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
Query: 61 FVR 63
FVR
Sbjct: 61 FVR 63
>gb|AAK25887.1| unknown protein [Arabidopsis thaliana]
Length = 413
Score = 116 bits (291), Expect = 1e-25
Identities = 52/62 (83%), Positives = 58/62 (92%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
++D+ TDKN VFRKLK+KSENK CFDC+AKNPTWASVTYGIFLCIDCSA HR+LGVHISF
Sbjct: 5 SADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISF 64
Query: 62 VR 63
VR
Sbjct: 65 VR 66
>ref|NP_973603.1| human Rev interacting-like family protein / hRIP family protein
[Arabidopsis thaliana]
Length = 371
Score = 116 bits (291), Expect = 1e-25
Identities = 53/63 (84%), Positives = 58/63 (91%)
Query: 1 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
MAS++ DK +VF+KLK KS+NK CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS
Sbjct: 1 MASENLNDKISVFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
Query: 61 FVR 63
FVR
Sbjct: 61 FVR 63
>dbj|BAD43015.1| unknown protein [Arabidopsis thaliana]
Length = 413
Score = 116 bits (291), Expect = 1e-25
Identities = 52/62 (83%), Positives = 58/62 (92%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
++D+ TDKN VFRKLK+KSENK CFDC+AKNPTWASVTYGIFLCIDCSA HR+LGVHISF
Sbjct: 5 SADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISF 64
Query: 62 VR 63
VR
Sbjct: 65 VR 66
>gb|AAP55136.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|37537094|ref|NP_922849.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|12643061|gb|AAK00450.1| unknown protein [Oryza
sativa]
Length = 407
Score = 114 bits (286), Expect = 5e-25
Identities = 50/62 (80%), Positives = 56/62 (89%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
+S + DKN VFRKL+ KS+NK CFDCNAKNPTWASVTYG+FLCIDCSAVHRSLGVH+SF
Sbjct: 6 SSSAAADKNTVFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSF 65
Query: 62 VR 63
VR
Sbjct: 66 VR 67
>ref|XP_315621.2| ENSANGP00000007262 [Anopheles gambiae str. PEST]
gi|55238411|gb|EAA11857.2| ENSANGP00000007262
[Anopheles gambiae str. PEST]
Length = 519
Score = 97.1 bits (240), Expect = 1e-19
Identities = 39/62 (62%), Positives = 55/62 (87%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
+S S D +A+F +L++++ NK+CFDC AKNPTW++VTYG+F+CIDCSAVHR+LGVH++F
Sbjct: 5 SSPSKEDIDAIFHRLRSQATNKTCFDCGAKNPTWSTVTYGVFICIDCSAVHRNLGVHLTF 64
Query: 62 VR 63
VR
Sbjct: 65 VR 66
>ref|XP_421112.1| PREDICTED: similar to zinc finger protein 289, ID1 regulated
[Gallus gallus]
Length = 525
Score = 96.3 bits (238), Expect = 2e-19
Identities = 40/62 (64%), Positives = 50/62 (80%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
A S T+ +F++L+ NKSCFDC AKNP+WAS+TYG+FLCIDCS VHRSLGVH+SF
Sbjct: 4 AEPSKTEIQTLFKRLRAAPANKSCFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSF 63
Query: 62 VR 63
+R
Sbjct: 64 IR 65
>dbj|BAB26362.1| unnamed protein product [Mus musculus]
Length = 534
Score = 94.7 bits (234), Expect = 6e-19
Identities = 39/62 (62%), Positives = 51/62 (81%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
AS S T+ +F++L+ NK+CFDC AK+P+WAS+TYG+FLCIDCS VHRSLGVH+SF
Sbjct: 3 ASPSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSF 62
Query: 62 VR 63
+R
Sbjct: 63 IR 64
>ref|NP_076343.1| zinc finger protein 289 [Mus musculus] gi|9651765|gb|AAF91258.1|
zinc finger protein 289 [Mus musculus]
Length = 520
Score = 94.7 bits (234), Expect = 6e-19
Identities = 39/62 (62%), Positives = 51/62 (81%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
AS S T+ +F++L+ NK+CFDC AK+P+WAS+TYG+FLCIDCS VHRSLGVH+SF
Sbjct: 3 ASPSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSF 62
Query: 62 VR 63
+R
Sbjct: 63 IR 64
>gb|AAH05495.1| Zinc finger protein 289 [Mus musculus]
Length = 520
Score = 94.7 bits (234), Expect = 6e-19
Identities = 39/62 (62%), Positives = 51/62 (81%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
AS S T+ +F++L+ NK+CFDC AK+P+WAS+TYG+FLCIDCS VHRSLGVH+SF
Sbjct: 3 ASPSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSF 62
Query: 62 VR 63
+R
Sbjct: 63 IR 64
>emb|CAG02441.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1054
Score = 94.7 bits (234), Expect = 6e-19
Identities = 38/63 (60%), Positives = 52/63 (82%)
Query: 1 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
M+ S D +A+F++L++ NK CFDC+ KNP+WAS+TYG+FLCIDCS +HRSLGVH+S
Sbjct: 1 MSEPSKQDISAIFKRLRSIPTNKICFDCSVKNPSWASITYGVFLCIDCSGIHRSLGVHLS 60
Query: 61 FVR 63
F+R
Sbjct: 61 FIR 63
>ref|NP_001016210.1| hypothetical protein LOC548964 [Xenopus tropicalis]
Length = 535
Score = 94.4 bits (233), Expect = 7e-19
Identities = 40/63 (63%), Positives = 49/63 (77%)
Query: 1 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
MA D A+FR+L++ NK CFDC AKNP+WAS+TYG+FLCIDCS HRSLGVH+S
Sbjct: 1 MAEPHKQDIAAIFRRLRSIPSNKVCFDCGAKNPSWASITYGVFLCIDCSGTHRSLGVHLS 60
Query: 61 FVR 63
F+R
Sbjct: 61 FIR 63
>ref|XP_393119.2| PREDICTED: similar to ENSANGP00000007262 [Apis mellifera]
Length = 741
Score = 94.0 bits (232), Expect = 9e-19
Identities = 39/59 (66%), Positives = 49/59 (82%)
Query: 5 SFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
S +D +F++L+ NK+CFDCNAKNP W+SVTYG+FLCIDCSAVHR LGVH++FVR
Sbjct: 214 SKSDIEEIFKRLRAIPTNKTCFDCNAKNPAWSSVTYGVFLCIDCSAVHRGLGVHLTFVR 272
>gb|AAH30148.1| Zinc finger protein 289, ID1 regulated [Homo sapiens]
gi|31543983|ref|NP_115765.2| zinc finger protein 289,
ID1 regulated [Homo sapiens]
Length = 521
Score = 93.6 bits (231), Expect = 1e-18
Identities = 38/62 (61%), Positives = 50/62 (80%)
Query: 2 ASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
A + T+ +F++L+ NK+CFDC AKNP+WAS+TYG+FLCIDCS VHRSLGVH+SF
Sbjct: 3 AEPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSF 62
Query: 62 VR 63
+R
Sbjct: 63 IR 64
>gb|AAH90141.1| MGC97866 protein [Xenopus tropicalis]
gi|62752016|ref|NP_001015850.1| MGC97866 protein
[Xenopus tropicalis]
Length = 526
Score = 93.6 bits (231), Expect = 1e-18
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 11 AVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
AVF++L+ NKSCFDC AKNP+WAS+ YG+FLCIDCS VHRSLGVH+SF+R
Sbjct: 12 AVFKRLRAAPTNKSCFDCGAKNPSWASIPYGVFLCIDCSGVHRSLGVHLSFIR 64
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.132 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,287,761
Number of Sequences: 2540612
Number of extensions: 2793740
Number of successful extensions: 9734
Number of sequences better than 10.0: 638
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 9098
Number of HSP's gapped (non-prelim): 656
length of query: 63
length of database: 863,360,394
effective HSP length: 39
effective length of query: 24
effective length of database: 764,276,526
effective search space: 18342636624
effective search space used: 18342636624
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)
Medicago: description of AC148483.13