BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148406.1 + phase: 0 
         (114 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_974233.1| expressed protein [Arabidopsis thaliana]              81  5e-15
gb|AAM64547.1| unknown [Arabidopsis thaliana]                          78  4e-14
gb|AAM98314.1| At5g26741/At5g26741 [Arabidopsis thaliana] gi|184...    78  4e-14
ref|NP_910007.1| hypothetical protein [Oryza sativa] gi|18855055...    45  3e-04
gb|EAA22635.1| hypothetical protein [Plasmodium yoelii yoelii]         35  0.33
emb|CAH97309.1| Pb-fam-2 protein [Plasmodium berghei]                  33  1.6
ref|NP_110751.1| NADH:flavin oxidoreductase [Thermoplasma volcan...    32  3.7
emb|CAH75981.1| conserved hypothetical protein [Plasmodium chaba...    32  4.8
ref|ZP_00371962.1| conserved hypothetical protein [Campylobacter...    31  8.1

>ref|NP_974233.1| expressed protein [Arabidopsis thaliana]
          Length = 205

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 48/99 (48%), Positives = 69/99 (69%), Gaps = 4/99 (4%)

Query: 7   NPLFRTESFGYYNFPDQNYTMIEKRQLFLRSYQFCRKKSLTERIKGSLVR-AKKVVWLKL 65
           N ++++ S GYY++       +EKRQLFL+SYQF RK+S TE+IK S+ R  KKVV ++L
Sbjct: 107 NGVWQSNSNGYYSY-GYGGGYVEKRQLFLKSYQFSRKQSFTEKIKISMKRVVKKVVCMRL 165

Query: 66  RYARGLRRKLVFFPRFKCGFYYRRRRFSQLLNNSGSSHH 104
           + AR L+R  V + R K  F+YRRRRF +LL+ + SS +
Sbjct: 166 KSARRLKR--VVWSRLKTAFFYRRRRFLRLLHPNKSSSY 202


>gb|AAM64547.1| unknown [Arabidopsis thaliana]
          Length = 99

 Score = 78.2 bits (191), Expect = 4e-14
 Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 5/90 (5%)

Query: 9  LFRTESFG-YYNFPDQNYTMIEKRQLFLRSYQFCRKKSLTERIKGSLVRAKKVVWLKLRY 67
          +FR+ S G YY  P   Y  +EKRQLFLRSYQF RK+S  E++  S+ R K+VV  +LR 
Sbjct: 6  VFRSTSGGDYYGAPYGEY--MEKRQLFLRSYQFSRKQSFAEKVSRSVTRVKRVVLTRLRS 63

Query: 68 ARGLRRKLVFFPRFKCGFYYRRRRFSQLLN 97
          A  L+R  V + R +  FYYRRRRF +LL+
Sbjct: 64 APKLKR--VVWSRLRSAFYYRRRRFFRLLH 91


>gb|AAM98314.1| At5g26741/At5g26741 [Arabidopsis thaliana]
          gi|18421036|ref|NP_568485.1| expressed protein
          [Arabidopsis thaliana] gi|14488090|gb|AAK63865.1|
          AT5g26741 [Arabidopsis thaliana]
          Length = 99

 Score = 78.2 bits (191), Expect = 4e-14
 Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 5/90 (5%)

Query: 9  LFRTESFG-YYNFPDQNYTMIEKRQLFLRSYQFCRKKSLTERIKGSLVRAKKVVWLKLRY 67
          +FR+ S G YY  P   Y  +EKRQLFLRSYQF RK+S  E++  S+ R K+VV  +LR 
Sbjct: 6  VFRSTSGGDYYGAPYGEY--MEKRQLFLRSYQFSRKQSFAEKVSRSVTRVKRVVLTRLRS 63

Query: 68 ARGLRRKLVFFPRFKCGFYYRRRRFSQLLN 97
          A  L+R  V + R +  FYYRRRRF +LL+
Sbjct: 64 APKLKR--VVWSRLRSAFYYRRRRFFRLLH 91


>ref|NP_910007.1| hypothetical protein [Oryza sativa] gi|18855055|gb|AAL79747.1|
           hypothetical protein [Oryza sativa]
          Length = 125

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 37/101 (36%), Positives = 49/101 (47%), Gaps = 19/101 (18%)

Query: 28  IEKRQLFLRSYQFCRKKSLTERIKGSLVRAKKVVWLKLRYAR-----GLRR-----KLVF 77
           +E+RQLFLRSY F R   L+ R      RA++VVW+ LR  R     GLRR     +L F
Sbjct: 30  VERRQLFLRSYHFSRDVELSPR-----ARARRVVWVGLRRLRRAAATGLRRLRARLRLCF 84

Query: 78  -FPRFKCGFYYRRRRFSQLLNNSGSSHHR---KVDSSSCLW 114
            +   +   + R  RF +    SG + H       SS C W
Sbjct: 85  AWVSRRRNIHRRGARFGRYGRLSGGAAHAPAPAASSSVCFW 125


>gb|EAA22635.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 610

 Score = 35.4 bits (80), Expect = 0.33
 Identities = 16/39 (41%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 49 RIKGSLVRAKKVVWLKLRYARGLRRKLVFFPRFKCGFYY 87
          RIK   +R KK +++K+ + RG+R+KL+ F + K GF++
Sbjct: 44 RIKSKDIRFKKKIFVKVPF-RGIRQKLLLFDKLKNGFFF 81


>emb|CAH97309.1| Pb-fam-2 protein [Plasmodium berghei]
          Length = 162

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 14/39 (35%), Positives = 27/39 (68%), Gaps = 1/39 (2%)

Query: 49 RIKGSLVRAKKVVWLKLRYARGLRRKLVFFPRFKCGFYY 87
          R+K   +R KK +++K+ + RG+R+KL+ F + K G ++
Sbjct: 44 RVKSKDIRFKKNIYVKIPF-RGIRQKLLLFDKLKNGLFF 81


>ref|NP_110751.1| NADH:flavin oxidoreductase [Thermoplasma volcanium GSS1]
           gi|14324447|dbj|BAB59375.1| NADH oxidase [Thermoplasma
           volcanium GSS1]
          Length = 547

 Score = 32.0 bits (71), Expect = 3.7
 Identities = 22/69 (31%), Positives = 34/69 (48%), Gaps = 12/69 (17%)

Query: 16  GYYNFPDQNYTMI-EKRQLFLRS-----------YQFCRKKSLTERIKGSLVRAKKVVWL 63
           G Y  PD+ Y  + EK ++F+ S           Y    K  +T R   SL RA+K  +L
Sbjct: 436 GIYCLPDKTYPDLQEKPEIFIDSNVYMYHDIALKYSSTSKVFVTYRSLSSLDRARKAAFL 495

Query: 64  KLRYARGLR 72
           K+  +RG++
Sbjct: 496 KIAESRGIK 504


>emb|CAH75981.1| conserved hypothetical protein [Plasmodium chabaudi]
          Length = 251

 Score = 31.6 bits (70), Expect = 4.8
 Identities = 14/39 (35%), Positives = 27/39 (68%), Gaps = 1/39 (2%)

Query: 49 RIKGSLVRAKKVVWLKLRYARGLRRKLVFFPRFKCGFYY 87
          RI+ + +R KK +++K+   RG+R+KL+ F + K G ++
Sbjct: 15 RIRNNNIRFKKKIFVKVP-VRGIRQKLLLFDKLKNGLFF 52


>ref|ZP_00371962.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
           gi|57015647|gb|EAL52438.1| conserved hypothetical
           protein [Campylobacter upsaliensis RM3195]
          Length = 365

 Score = 30.8 bits (68), Expect = 8.1
 Identities = 23/64 (35%), Positives = 31/64 (47%), Gaps = 13/64 (20%)

Query: 32  QLFLRSYQFCRKKSLTERIKGSLVRAKKVVWLKLRYARGLRRKLVFFPRFKCGFYYRRRR 91
           +LFLR  +F +              AK+ V+LK+  AR LR KL+ F RF   F Y + R
Sbjct: 259 ELFLREGEFYKS-------------AKEEVFLKVFVARILRLKLIEFKRFYENFSYEKFR 305

Query: 92  FSQL 95
              L
Sbjct: 306 LKCL 309


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.329    0.140    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,309,110
Number of Sequences: 2540612
Number of extensions: 6193179
Number of successful extensions: 13477
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 13465
Number of HSP's gapped (non-prelim): 9
length of query: 114
length of database: 863,360,394
effective HSP length: 90
effective length of query: 24
effective length of database: 634,705,314
effective search space: 15232927536
effective search space used: 15232927536
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 68 (30.8 bits)