BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148404.5 - phase: 0
(192 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana] gi|4... 119 5e-26
emb|CAD29616.1| auxin response factor 36 [Arabidopsis thaliana] 113 2e-24
ref|XP_463207.1| putative auxin response factor [Oryza sativa (j... 77 3e-13
ref|XP_463206.1| putative auxin response factor [Oryza sativa (j... 73 5e-12
emb|CAB80157.1| putative protein [Arabidopsis thaliana] gi|44551... 72 6e-12
ref|XP_463202.1| putative auxin response factor [Oryza sativa (j... 67 2e-10
dbj|BAB08937.1| unnamed protein product [Arabidopsis thaliana] g... 64 2e-09
gb|AAF30315.1| hypothetical protein [Arabidopsis thaliana] gi|15... 64 2e-09
gb|AAF30309.1| hypothetical protein [Arabidopsis thaliana] gi|15... 63 4e-09
dbj|BAA96942.1| unnamed protein product [Arabidopsis thaliana] 62 7e-09
gb|AAY78874.1| transcriptional factor B3 family protein [Arabido... 62 7e-09
emb|CAB67638.1| putative protein [Arabidopsis thaliana] gi|11357... 60 4e-08
gb|AAM65128.1| unknown [Arabidopsis thaliana] gi|18409814|ref|NP... 60 4e-08
gb|AAM76973.1| reduced vernalization response 1 [Arabidopsis tha... 59 7e-08
dbj|BAD87058.1| hypothetical protein [Oryza sativa (japonica cul... 59 7e-08
ref|NP_683415.1| transcriptional factor B3 family protein [Arabi... 58 2e-07
gb|AAX96729.1| B3 DNA binding domain, putative [Oryza sativa (ja... 58 2e-07
ref|XP_481619.1| hypothetical protein [Oryza sativa (japonica cu... 57 2e-07
ref|NP_916714.1| P0022F10.13 [Oryza sativa (japonica cultivar-gr... 57 4e-07
ref|NP_200822.1| transcriptional factor B3 family protein [Arabi... 55 8e-07
>emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana]
gi|4490295|emb|CAB38786.1| hypothetical protein
[Arabidopsis thaliana] gi|15234131|ref|NP_195054.1|
transcriptional factor B3 family protein [Arabidopsis
thaliana] gi|7485659|pir||T05979 hypothetical protein
F17M5.40 - Arabidopsis thaliana
Length = 461
Score = 119 bits (298), Expect = 5e-26
Identities = 62/138 (44%), Positives = 88/138 (62%), Gaps = 8/138 (5%)
Query: 4 ILIWKFILLLQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDG-FVYFVDGWQQF 62
I I F LLQ +P+ FS + +KLP+ VTLK PSGVT+N+ + D + F GW +F
Sbjct: 96 IKITTFCNLLQVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKF 155
Query: 63 MNDHSLKANDFLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQG-------G 115
+ DHSL+ ND LV K++G S FEVL+FDG++ CEK SYFV KCGHA+ +G
Sbjct: 156 VKDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKGIIDFNATS 215
Query: 116 SNASETNNSIEEVDTDSN 133
S + + + + ++V+T N
Sbjct: 216 SRSPKRHFNPDDVETTPN 233
>emb|CAD29616.1| auxin response factor 36 [Arabidopsis thaliana]
Length = 337
Score = 113 bits (283), Expect = 2e-24
Identities = 56/119 (47%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDG-FVYFVDGWQQFMNDHSLKANDFL 74
+P+ FS + +KLP+ VTLK PSGVT+N+ + D + F GW +F+ DHSL+ ND L
Sbjct: 39 IPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLL 98
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSI-EEVDTDS 132
V K++G S FEVL+FDG++ CEK SYFV KCGHA+ + E I ++DT S
Sbjct: 99 VFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTGYEQEEHINSDIDTAS 157
>ref|XP_463207.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)] gi|28201564|gb|AAO34502.1| putative
auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 750
Score = 77.0 bits (188), Expect = 3e-13
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRD-GFVYFVDGWQQFMNDHSLKANDFL 74
+P F++N N + E V LK PSG TW+I + D G + GW++F++ + ++ ND L
Sbjct: 46 VPSRFANNFNGHISEVVNLKSPSGKTWSIGVAYSDTGELVLRSGWKEFVDANGVQENDCL 105
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQT-----AQGGSNASETN 122
+ +Y+G S F+VLIFD S CEK + +FVE G + A+GG + N
Sbjct: 106 LFRYSGVSSFDVLIFD-PSGCEKASPHFVENRGFGREEKSAGAEGGGRDGDKN 157
Score = 70.5 bits (171), Expect = 2e-11
Identities = 42/114 (36%), Positives = 63/114 (54%), Gaps = 9/114 (7%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRD-GFVYFVDGWQQFMNDHSLKANDFL 74
+P F++N N + E V L+ PSG TW+I + D G + GW++F++ + ++ D L
Sbjct: 424 VPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCL 483
Query: 75 VCKYNG-ESHFEVLIFDGESFCEKEASYFVEKCG------HAQTAQGGSNASET 121
+ +Y+G S F+VLIFD S CEK + +FV G A QGG N T
Sbjct: 484 LFRYSGVSSSFDVLIFD-PSGCEKASPHFVGSHGFGRAENSAGAEQGGRNGRRT 536
>ref|XP_463206.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)] gi|28201561|gb|AAO34499.1| putative
auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 306
Score = 72.8 bits (177), Expect = 5e-12
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 14 QALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDF 73
+ +P F N K+P+++ L+ SG+T+++++T G V GW +++ H LK DF
Sbjct: 44 KTIPNEFLHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAHDLKIGDF 103
Query: 74 LVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHA-QTAQGGSNASETNNSIEEVDTDS 132
LV KY+G+S + LIFD S CEK V+ G + A S + ++
Sbjct: 104 LVFKYSGDSQLKTLIFD-SSGCEKVCEKPVDMSGRSYDIAMRNSQDEKKKRKQRDISRQG 162
Query: 133 NGGDSPEQFTDDAVP 147
S E + VP
Sbjct: 163 TVKPSEEGLKAELVP 177
>emb|CAB80157.1| putative protein [Arabidopsis thaliana] gi|4455185|emb|CAB36717.1|
putative protein [Arabidopsis thaliana]
gi|15235362|ref|NP_195166.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
gi|7485318|pir||T04786 hypothetical protein F10M10.170 -
Arabidopsis thaliana
Length = 389
Score = 72.4 bits (176), Expect = 6e-12
Identities = 36/103 (34%), Positives = 53/103 (50%), Gaps = 1/103 (0%)
Query: 2 FLILIWKFILLLQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQ 61
F + + F +P ++ D++ + P+ V L+GP G +W + +D V F GW +
Sbjct: 17 FTVFVSHFSSEFMVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVLFSQGWPK 76
Query: 62 FMNDHSLKANDFLVCKYNGESHFEVLIFDGESFCEKEASYFVE 104
F+ D++L DFL YNG FEV IF G C KE S E
Sbjct: 77 FVRDNTLNDGDFLTFAYNGAHIFEVSIFRGYDAC-KEISEVTE 118
>ref|XP_463202.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)] gi|28201553|gb|AAO34491.1| putative
auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 1029
Score = 67.4 bits (163), Expect = 2e-10
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F++N ++ + LK +G T ++ + + GW +F N H +K DFLV
Sbjct: 164 IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFANSHDIKMGDFLV 223
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCG-HAQTAQG 114
+Y G S FEV IFD S C K AS+ G HAQ QG
Sbjct: 224 FRYTGNSQFEVKIFD-PSGCVKAASHNAVNIGQHAQNMQG 262
Score = 64.3 bits (155), Expect = 2e-09
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F+ + + + + L+ SG T+++++T + + GW+ F+N H L DFLV
Sbjct: 467 IPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLV 526
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKC---------GHAQTAQGGSNASETNNSIE 126
KYNG+ +VLIFD S CEK S +E H + + + N
Sbjct: 527 FKYNGDFLLQVLIFD-PSGCEKSTSCSMENAIDHVGQGWKEHNDISTSYHDQPKGNKHWM 585
Query: 127 EVDTDSNG--------GDSPEQFTDDAVPKTTAI 152
+ D+ S G ++P +F+ +P+ T +
Sbjct: 586 QKDSSSKGNKIGNTRSSNTPSKFSGCILPRGTCL 619
Score = 62.4 bits (150), Expect = 7e-09
Identities = 46/145 (31%), Positives = 67/145 (45%), Gaps = 8/145 (5%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F K+P + L+ G T+++++T G + GW+ F+ H L+ DFLV
Sbjct: 748 IPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLV 807
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEK----CGH--AQTAQGGSNASETN-NSIEEV 128
Y+G S +VLIF G S CEK S K CG + SN+ + S + V
Sbjct: 808 FSYDGISKLKVLIF-GPSGCEKVHSRSTLKNATHCGEKWEEPLHISSNSHDLPVKSPQNV 866
Query: 129 DTDSNGGDSPEQFTDDAVPKTTAIQ 153
DS EQ D A + A+Q
Sbjct: 867 SKSEKQWDSSEQENDTANIEEVALQ 891
>dbj|BAB08937.1| unnamed protein product [Arabidopsis thaliana]
gi|15240157|ref|NP_201499.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 334
Score = 64.3 bits (155), Expect = 2e-09
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDG----FVYFVDGWQQFMNDHSLKAN 71
+P F D L K LP+ L G W + T D V+F GWQ F ND SL+
Sbjct: 25 IPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVFFTKGWQSFANDQSLEFG 84
Query: 72 DFLVCKYNGESHFEVLIFDGESFCEKE 98
DFLV Y+G+S F V IF + C+K+
Sbjct: 85 DFLVFSYDGDSRFSVTIFANDG-CKKD 110
>gb|AAF30315.1| hypothetical protein [Arabidopsis thaliana]
gi|15230669|ref|NP_187273.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 175
Score = 63.9 bits (154), Expect = 2e-09
Identities = 37/138 (26%), Positives = 63/138 (44%), Gaps = 3/138 (2%)
Query: 13 LQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKAND 72
L+ +P+++ ++L ++LP+ L G G W + + ++ VY GW+ F+ D+ LK +
Sbjct: 23 LKLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKREQVYLARGWENFVADNELKDGE 82
Query: 73 FLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQG---GSNASETNNSIEEVD 129
FL ++G +EV I+ S E A VE+ + GS T EE
Sbjct: 83 FLTFVFDGYKSYEVSIYGRGSCKETRAVVHVEEISDESESDNDSLGSLVDVTPMPAEENS 142
Query: 130 TDSNGGDSPEQFTDDAVP 147
D+ G + D P
Sbjct: 143 DDTEGDNDSCDSVVDVTP 160
>gb|AAF30309.1| hypothetical protein [Arabidopsis thaliana]
gi|15230649|ref|NP_187267.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 330
Score = 63.2 bits (152), Expect = 4e-09
Identities = 35/122 (28%), Positives = 59/122 (47%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P+++ + L + LP+ L G G W + +T++ VYF GW F+ D+ LK +FL
Sbjct: 40 IPRSYYNLLPRPLPKTAILIGTGGRFWKVAMTSKQEQVYFEQGWGNFVADNQLKEGEFLT 99
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGG 135
++G +EV I+ E A VE+ S S +N S++ + DS+
Sbjct: 100 FVFDGHKSYEVSIYGRGDCKETRAVIQVEEISDDTEDDNVSLHSPSNVSLDSLSNDSHHS 159
Query: 136 DS 137
S
Sbjct: 160 TS 161
>dbj|BAA96942.1| unnamed protein product [Arabidopsis thaliana]
Length = 326
Score = 62.4 bits (150), Expect = 7e-09
Identities = 43/137 (31%), Positives = 69/137 (49%), Gaps = 9/137 (6%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDG------FVYFVDGWQQFMNDHSLK 69
LP +F+ L K LPE VT++ SG W + L G FV V+GW++ + D LK
Sbjct: 29 LPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEKFV-MVNGWKRIVKDEDLK 87
Query: 70 ANDFLVCKYNGESHFEVLIFDGESFCEK--EASYFVEKCGHAQTAQGGSNASETNNSIEE 127
DFL +++G S F I++ + C+K +S E+ + + AS+ S++E
Sbjct: 88 GGDFLEFEFDGSSCFHFCIYEHRTMCKKIRRSSDQSEEIKVESDSDEQNQASDDVLSLDE 147
Query: 128 VDTDSNGGDSPEQFTDD 144
D DS+ + +DD
Sbjct: 148 DDDDSDYNCGEDNDSDD 164
>gb|AAY78874.1| transcriptional factor B3 family protein [Arabidopsis thaliana]
gi|15238622|ref|NP_200821.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 300
Score = 62.4 bits (150), Expect = 7e-09
Identities = 43/137 (31%), Positives = 69/137 (49%), Gaps = 9/137 (6%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDG------FVYFVDGWQQFMNDHSLK 69
LP +F+ L K LPE VT++ SG W + L G FV V+GW++ + D LK
Sbjct: 3 LPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEKFV-MVNGWKRIVKDEDLK 61
Query: 70 ANDFLVCKYNGESHFEVLIFDGESFCEK--EASYFVEKCGHAQTAQGGSNASETNNSIEE 127
DFL +++G S F I++ + C+K +S E+ + + AS+ S++E
Sbjct: 62 GGDFLEFEFDGSSCFHFCIYEHRTMCKKIRRSSDQSEEIKVESDSDEQNQASDDVLSLDE 121
Query: 128 VDTDSNGGDSPEQFTDD 144
D DS+ + +DD
Sbjct: 122 DDDDSDYNCGEDNDSDD 138
>emb|CAB67638.1| putative protein [Arabidopsis thaliana] gi|11357788|pir||T45871
hypothetical protein F4P12.10 - Arabidopsis thaliana
Length = 283
Score = 59.7 bits (143), Expect = 4e-08
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F L LP+ V L+G G W + L G Y GW +F +H LK +F+
Sbjct: 26 IPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHELKNGEFMT 85
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGG 135
Y+G FEV +FD E A + + S + +S + V+ D +
Sbjct: 86 FVYDGHRTFEVSVFDRWGSKEVRAEI---QAIPLSDSDSDSVVEDEKDSTDVVEDDDDED 142
Query: 136 DSPEQFTDDAVPKTTAIQSPFIPTGKRT 163
+ ++ D + + I P + T
Sbjct: 143 EDEDEDDDGSFDEDEEISQSLYPIDEET 170
>gb|AAM65128.1| unknown [Arabidopsis thaliana] gi|18409814|ref|NP_566984.1|
transcriptional factor B3 family protein [Arabidopsis
thaliana]
Length = 286
Score = 59.7 bits (143), Expect = 4e-08
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F L LP+ V L+G G W + L G Y GW +F +H LK +F+
Sbjct: 26 IPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHELKNGEFMT 85
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGG 135
Y+G FEV +FD E A + + S + +S + V+ D +
Sbjct: 86 FVYDGHRTFEVSVFDRWGSKEVRAEI---QAIPLSDSDSDSVVEDEKDSTDVVEDDDDED 142
Query: 136 DSPEQFTDDAVPKTTAIQSPFIPTGKRT 163
+ ++ D + + I P + T
Sbjct: 143 EDEDEDDDGSFDEDEEISQSLYPIDEET 170
>gb|AAM76973.1| reduced vernalization response 1 [Arabidopsis thaliana]
gi|21734794|gb|AAM76972.1| reduced vernalization
response 1 [Arabidopsis thaliana]
gi|30685150|ref|NP_188529.2| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 341
Score = 58.9 bits (141), Expect = 7e-08
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F +L V L P G W + L D ++F DGWQ+F++ +S++ L+
Sbjct: 22 VPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLI 81
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGG 135
+Y G S F V IF + E +Y G +A + +E+ D +
Sbjct: 82 FRYEGNSAFSVYIF---NLSHSEINY--HSTGLMDSAHNHFKRARLFEDLEDEDAEVIFP 136
Query: 136 DS--PEQFTDDAVP-----KTTAIQSPF---------IPTGKRTKRRRRSPKAA 173
S P + VP ++AIQ+ F PT K K+R R K A
Sbjct: 137 SSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNA 190
>dbj|BAD87058.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 719
Score = 58.9 bits (141), Expect = 7e-08
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 16 LPKTFSDNLNKKLPENV--TLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDF 73
+P+ + LP + TL+ G TW + L DG V+ GW +F+ D+SL+ +F
Sbjct: 32 IPEVDHSTFDASLPSSAKGTLQNSEGKTWPVELEKLDGHVFLTTGWAKFVEDNSLREYEF 91
Query: 74 LVCKYNGESHFEVLIFDGESFCEK 97
L+ +Y+ HF VL F G + CEK
Sbjct: 92 LLFRYDDNMHFMVLPF-GLNACEK 114
>ref|NP_683415.1| transcriptional factor B3 family protein [Arabidopsis thaliana]
Length = 250
Score = 57.8 bits (138), Expect = 2e-07
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 19/142 (13%)
Query: 3 LILIWKFILLLQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQF 62
+IL+ + I + +P F KL +NVTL+ P G +IR+ V+F GW +F
Sbjct: 37 IILLSRIIEKMMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEF 95
Query: 63 MNDHSLKANDFLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETN 122
HSL FL Y G+S F V+IFD + E Y ++ +T+
Sbjct: 96 AEAHSLSDGHFLFFHYEGDSCFRVVIFDVSA---SEIEYPLD---------------DTD 137
Query: 123 NSIEEVDTDSNGGDSPEQFTDD 144
++ EEV D G + + +DD
Sbjct: 138 DNREEVMDDDEQGFTGFESSDD 159
>gb|AAX96729.1| B3 DNA binding domain, putative [Oryza sativa (japonica
cultivar-group)]
Length = 363
Score = 57.8 bits (138), Expect = 2e-07
Identities = 41/152 (26%), Positives = 73/152 (47%), Gaps = 19/152 (12%)
Query: 13 LQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKAND 72
+Q +P +F+ L + V+L SG W+ LT+ +FV GW++F+ D+S++
Sbjct: 1 MQKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQ 60
Query: 73 FLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDS 132
FLV Y+ S F V +F+ S +K +++ +A + N I + ++D
Sbjct: 61 FLVFTYDKRSQFSVTVFE-PSGIDKISTF---------------SAHPSKNVIIKTESDE 104
Query: 133 NGGDSPEQFTDDAVPKTTAIQSPFIPTGKRTK 164
G + T+ P A++ TGKRT+
Sbjct: 105 GGMVTAAITTEKMAP---ALKENNGITGKRTR 133
>ref|XP_481619.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|38636994|dbj|BAD03253.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|38637418|dbj|BAD03676.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 391
Score = 57.4 bits (137), Expect = 2e-07
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+PK F L +PE + L+ + ++ +R+ V F GW QF+ L D ++
Sbjct: 49 IPKEFVQRLKGDIPEEIQLETHNRNSYTVRVDKSQEKVIFAAGWAQFVKTFDLHMGDSMM 108
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNS 124
++ G S F+V+IFD + EK S V+ +G ++A+ET NS
Sbjct: 109 FRFKGNSQFDVIIFD-QVGREKVCSVAVDDYLDPNVQEGRTDATETLNS 156
>ref|NP_916714.1| P0022F10.13 [Oryza sativa (japonica cultivar-group)]
gi|20160548|dbj|BAB89497.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 402
Score = 56.6 bits (135), Expect = 4e-07
Identities = 24/66 (36%), Positives = 41/66 (61%), Gaps = 1/66 (1%)
Query: 33 TLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLVCKYNGESHFEVLIFDGE 92
TL+GPSG TW + + +F GW +F+ D +L+ +F+V +Y+G + F ++FD
Sbjct: 62 TLEGPSGRTWLVVIRRTAEGTFFTSGWPKFVQDQALRELEFVVFRYDGNTRFTAMVFD-R 120
Query: 93 SFCEKE 98
+ CE+E
Sbjct: 121 TACERE 126
>ref|NP_200822.1| transcriptional factor B3 family protein [Arabidopsis thaliana]
Length = 328
Score = 55.5 bits (132), Expect = 8e-07
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFV---YFVDGWQQFMNDHSLKAND 72
LP +F+ L K LP+ VT++ SG W + G V V GW++ + D +L D
Sbjct: 30 LPISFNSCLPKSLPKTVTVRSISGNIWKLGFKKCGGEVERFVMVSGWKKIVRDENLNGGD 89
Query: 73 FLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEV---- 128
L +++G F IFD E+ C++ + + GS+ E + + ++V
Sbjct: 90 LLSFEFDGSHFFNFSIFDHETTCKRLKRSSEQS---KDIIKVGSDCEEESQASDDVIVLN 146
Query: 129 DTDSNGGDSPEQFTDDAV 146
DS+ D+ DD V
Sbjct: 147 SDDSDDSDNDYSVEDDNV 164
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 362,225,256
Number of Sequences: 2540612
Number of extensions: 15289272
Number of successful extensions: 43926
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 43807
Number of HSP's gapped (non-prelim): 147
length of query: 192
length of database: 863,360,394
effective HSP length: 121
effective length of query: 71
effective length of database: 555,946,342
effective search space: 39472190282
effective search space used: 39472190282
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)
Medicago: description of AC148404.5