BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148404.4 - phase: 0
(385 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD29616.1| auxin response factor 36 [Arabidopsis thaliana] 151 3e-35
emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana] gi|4... 126 1e-27
ref|XP_463207.1| putative auxin response factor [Oryza sativa (j... 96 2e-18
emb|CAB80157.1| putative protein [Arabidopsis thaliana] gi|44551... 91 8e-17
gb|AAF30315.1| hypothetical protein [Arabidopsis thaliana] gi|15... 77 9e-13
dbj|BAA96942.1| unnamed protein product [Arabidopsis thaliana] 74 6e-12
dbj|BAB08937.1| unnamed protein product [Arabidopsis thaliana] g... 73 1e-11
gb|AAF30309.1| hypothetical protein [Arabidopsis thaliana] gi|15... 72 2e-11
ref|XP_463206.1| putative auxin response factor [Oryza sativa (j... 72 3e-11
ref|NP_916714.1| P0022F10.13 [Oryza sativa (japonica cultivar-gr... 72 3e-11
gb|AAY78874.1| transcriptional factor B3 family protein [Arabido... 69 2e-10
gb|AAT77042.1| putative transcription factor(auxin response fact... 69 2e-10
ref|XP_463202.1| putative auxin response factor [Oryza sativa (j... 69 3e-10
emb|CAB67638.1| putative protein [Arabidopsis thaliana] gi|11357... 68 5e-10
ref|NP_200822.1| transcriptional factor B3 family protein [Arabi... 67 7e-10
gb|AAM65128.1| unknown [Arabidopsis thaliana] gi|18409814|ref|NP... 67 1e-09
emb|CAB51188.1| putative protein [Arabidopsis thaliana] gi|15232... 65 3e-09
gb|AAM76973.1| reduced vernalization response 1 [Arabidopsis tha... 64 6e-09
ref|XP_481619.1| hypothetical protein [Oryza sativa (japonica cu... 63 1e-08
gb|AAX23816.1| hypothetical protein At2g16210 [Arabidopsis thali... 62 2e-08
>emb|CAD29616.1| auxin response factor 36 [Arabidopsis thaliana]
Length = 337
Score = 151 bits (382), Expect = 3e-35
Identities = 70/148 (47%), Positives = 98/148 (65%), Gaps = 2/148 (1%)
Query: 145 WEEDIYWTHFQFIHFTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLI 204
WEE++YWTHFQ +HFTQLL F +L +P+ FS + +KLP+ VTLK P GV + +G+
Sbjct: 11 WEEELYWTHFQTLHFTQLLLPGFHNRLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVE 70
Query: 205 TRDD-TVYFLNGWQRFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYFVGKC 263
D+ T+ F GW +FV DHSL++ND LVF ++G S F+VL+FDG++ CEK SYFV KC
Sbjct: 71 EDDEKTMAFRFGWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKC 130
Query: 264 SHTQTELGGSKANETNNSI-EEVNTASS 290
H + E I +++TAS+
Sbjct: 131 GHAEKTKASHTGYEQEEHINSDIDTASA 158
Score = 123 bits (309), Expect = 8e-27
Identities = 97/283 (34%), Positives = 134/283 (47%), Gaps = 49/283 (17%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDD-TIYFTNGWQRFVKDHSLKENDFL 74
+P+ FS + K+KLP VTLK PSGV +NVG+ D+ T+ F GW +FVKDHSL+END L
Sbjct: 39 IPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLL 98
Query: 75 VFKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQVCNKGKSSNNSV-EEVSTPSN 133
VFK++G S FEVL+F G + CEK SYFV KCG A + + G + ++ T S
Sbjct: 99 VFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTGYEQEEHINSDIDTASA 158
Query: 134 GSVECSLPEKSWEEDIYWTHFQFIHFTQLLPEDFKQQLALPKTFSDNLNKKL-------- 185
S + + F + L D Q A + S NKK
Sbjct: 159 QLPVISPTSTVRVSEGKYPLSGFKKMRRELSNDNLDQKADVEMISAGSNKKALSLAKRAI 218
Query: 186 -PEN--VTLKGPGGVA---------W--KIGLITRDDTVYFLN----------------- 214
P+ V +K V+ W K LITR + V ++
Sbjct: 219 SPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSG 278
Query: 215 ----GWQRFVNDHSLKDNDFLVFN-YNGES---HFDVLIFDGE 249
GW++FV D++L++ D VF N E+ H +V IF GE
Sbjct: 279 GISTGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321
>emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana]
gi|4490295|emb|CAB38786.1| hypothetical protein
[Arabidopsis thaliana] gi|15234131|ref|NP_195054.1|
transcriptional factor B3 family protein [Arabidopsis
thaliana] gi|7485659|pir||T05979 hypothetical protein
F17M5.40 - Arabidopsis thaliana
Length = 461
Score = 126 bits (317), Expect = 1e-27
Identities = 70/147 (47%), Positives = 94/147 (63%), Gaps = 8/147 (5%)
Query: 11 NLLQALPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDD-TIYFTNGWQRFVKDHSLK 69
NLLQ +P+ FS + K+KLP VTLK PSGV +NVG+ D+ T+ F GW +FVKDHSL+
Sbjct: 103 NLLQVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLE 162
Query: 70 ENDFLVFKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAH-TEQVCNKGKSSNNS---- 124
END LVFK++G S FEVL+F G + CEK SYFV KCG A T+ + + +S+ S
Sbjct: 163 ENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKGIIDFNATSSRSPKRH 222
Query: 125 --VEEVSTPSNGSVECSLPEKSWEEDI 149
++V T N + S P + ED+
Sbjct: 223 FNPDDVETTPNQQLVISPPVDNELEDL 249
Score = 113 bits (283), Expect = 9e-24
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 173 LPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDD-TVYFLNGWQRFVNDHSLKDNDFL 231
+P+ FS + +KLP+ VTLK P GV + +G+ D+ T+ F GW +FV DHSL++ND L
Sbjct: 108 IPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLL 167
Query: 232 VFNYNGESHFDVLIFDGESFCEKEASYFVGKCSHTQTELG-------GSKANETNNSIEE 284
VF ++G S F+VL+FDG++ CEK SYFV KC H + G S++ + + + ++
Sbjct: 168 VFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKGIIDFNATSSRSPKRHFNPDD 227
Query: 285 VNTASS-----DGGVECGLYEKFQ-----DLNNIGTPLAVPVET--TNEKTFNAGVESDS 332
V T + V+ L + D++ I PL V T E+ N+ +++ S
Sbjct: 228 VETTPNQQLVISPPVDNELEDLIDIDLDFDIDKILNPLLVASHTGYEQEEHINSDIDTAS 287
Query: 333 PELLIADTVTKTTAIQFPYQPTGKRSKRRRSS 364
+L + + + Y +G + RR S
Sbjct: 288 AQLPVISPTSTVRVSEGKYPLSGFKKMRRELS 319
Score = 44.7 bits (104), Expect = 0.005
Identities = 17/27 (62%), Positives = 21/27 (76%)
Query: 145 WEEDIYWTHFQFIHFTQLLPEDFKQQL 171
WEE++YWTHFQ +HFTQLL F +L
Sbjct: 11 WEEELYWTHFQTLHFTQLLLPGFHNRL 37
>ref|XP_463207.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)] gi|28201564|gb|AAO34502.1| putative
auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 750
Score = 95.5 bits (236), Expect = 2e-18
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 143 KSWEEDIYWTHF--QFIHFTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWK 200
K W+E YW+H HF + DF + + +P F++N N + E V LK P G W
Sbjct: 14 KEWQEHCYWSHMADDCKHFLTYMVGDFTESMIVPSRFANNFNGHISEVVNLKSPSGKTWS 73
Query: 201 IGLITRDDTVYFL-NGWQRFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYF 259
IG+ D L +GW+ FV+ + +++ND L+F Y+G S FDVLIFD S CEK + +F
Sbjct: 74 IGVAYSDTGELVLRSGWKEFVDANGVQENDCLLFRYSGVSSFDVLIFD-PSGCEKASPHF 132
Query: 260 V 260
V
Sbjct: 133 V 133
Score = 72.8 bits (177), Expect = 2e-11
Identities = 44/138 (31%), Positives = 70/138 (49%), Gaps = 9/138 (6%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDD-TIYFTNGWQRFVKDHSLKENDFL 74
+P F++N + V LK PSG W++G+ D + +GW+ FV + ++END L
Sbjct: 46 VPSRFANNFNGHISEVVNLKSPSGKTWSIGVAYSDTGELVLRSGWKEFVDANGVQENDCL 105
Query: 75 VFKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQVC-------NKGKSSNNSVEE 127
+F+Y+G S F+VLIF S CEKA+ +FV G E+ + K+ ++ +
Sbjct: 106 LFRYSGVSSFDVLIF-DPSGCEKASPHFVENRGFGREEKSAGAEGGGRDGDKNGHHQHQL 164
Query: 128 VSTPSNGSVECSLPEKSW 145
TP S + E W
Sbjct: 165 EMTPHKNSSSPCIIEMKW 182
Score = 71.6 bits (174), Expect = 4e-11
Identities = 38/91 (41%), Positives = 54/91 (58%), Gaps = 3/91 (3%)
Query: 173 LPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLN-GWQRFVNDHSLKDNDFL 231
+P F++N N + E V L+ P G W IG+ D L GW+ FV+ + +++ D L
Sbjct: 424 VPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCL 483
Query: 232 VFNYNG-ESHFDVLIFDGESFCEKEASYFVG 261
+F Y+G S FDVLIFD S CEK + +FVG
Sbjct: 484 LFRYSGVSSSFDVLIFD-PSGCEKASPHFVG 513
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARD-DTIYFTNGWQRFVKDHSLKENDFL 74
+P F++N + V L+ PSG W++G+ D + GW+ FV + ++E D L
Sbjct: 424 VPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCL 483
Query: 75 VFKYNG-ESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQVCNKGKSSNN 123
+F+Y+G S F+VLIF S CEKA+ +FVG G E + N
Sbjct: 484 LFRYSGVSSSFDVLIFD-PSGCEKASPHFVGSHGFGRAENSAGAEQGGRN 532
>emb|CAB80157.1| putative protein [Arabidopsis thaliana] gi|4455185|emb|CAB36717.1|
putative protein [Arabidopsis thaliana]
gi|15235362|ref|NP_195166.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
gi|7485318|pir||T04786 hypothetical protein F10M10.170 -
Arabidopsis thaliana
Length = 389
Score = 90.5 bits (223), Expect = 8e-17
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 13/203 (6%)
Query: 159 FTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQR 218
FT + + + +P ++ D++ + P+ V L+GPGG +WK+ +DD V F GW +
Sbjct: 17 FTVFVSHFSSEFMVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVLFSQGWPK 76
Query: 219 FVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYFVGKCSHTQTELGGSKANET 278
FV D++L D DFL F YNG F+V IF G C KE S TEL E
Sbjct: 77 FVRDNTLNDGDFLTFAYNGAHIFEVSIFRGYDAC-KEIS--------EVTEL----EEEE 123
Query: 279 NNSIEEVNTASSDGGVECGLYEKFQDLNNIGTPLAVPVETTNEKTFNAGVESDSPELLIA 338
+S+ +++ +D G + + + + G VE +++ V S+S E
Sbjct: 124 EDSVISLSSEDTDTGAKSEMKNTVPEGRDKGKSKVEVVEDSDDDEEEDSVYSESSEETET 183
Query: 339 DTVTKTTAIQFPYQPTGKRSKRR 361
DT ++ + + K+ K++
Sbjct: 184 DTDSEFKVAKPTIPKSQKKGKKK 206
Score = 82.0 bits (201), Expect = 3e-14
Identities = 33/82 (40%), Positives = 51/82 (61%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+P ++ D++ + P V L+GP G W V +DD + F+ GW +FV+D++L + DFL
Sbjct: 31 IPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVLFSQGWPKFVRDNTLNDGDFLT 90
Query: 76 FKYNGESLFEVLIFHGDSFCEK 97
F YNG +FEV IF G C++
Sbjct: 91 FAYNGAHIFEVSIFRGYDACKE 112
>gb|AAF30315.1| hypothetical protein [Arabidopsis thaliana]
gi|15230669|ref|NP_187273.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 175
Score = 77.0 bits (188), Expect = 9e-13
Identities = 36/121 (29%), Positives = 69/121 (56%), Gaps = 8/121 (6%)
Query: 5 LNWKSINLLQALPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVK 64
L+ S N L+ +P+++ ++L ++LP L G G VW V + ++ + +Y GW+ FV
Sbjct: 15 LSCVSSNSLKLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKREQVYLARGWENFVA 74
Query: 65 DHSLKENDFLVFKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQVCNKGKSSNNS 124
D+ LK+ +FL F ++G +EV I+ G C++ + H E++ ++ +S N+S
Sbjct: 75 DNELKDGEFLTFVFDGYKSYEVSIY-GRGSCKETRAV-------VHVEEISDESESDNDS 126
Query: 125 V 125
+
Sbjct: 127 L 127
Score = 71.6 bits (174), Expect = 4e-11
Identities = 38/123 (30%), Positives = 68/123 (54%), Gaps = 4/123 (3%)
Query: 173 LPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQRFVNDHSLKDNDFLV 232
+P+++ ++L ++LP+ L G GG WK+ ++++ + VY GW+ FV D+ LKD +FL
Sbjct: 26 IPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKREQVYLARGWENFVADNELKDGEFLT 85
Query: 233 FNYNGESHFDVLIFDGESFCEKEASYFVGKC---SHTQTELGGSKANETNNSIEEVNTAS 289
F ++G ++V I+ S E A V + S + + GS + T EE N+
Sbjct: 86 FVFDGYKSYEVSIYGRGSCKETRAVVHVEEISDESESDNDSLGSLVDVTPMPAEE-NSDD 144
Query: 290 SDG 292
++G
Sbjct: 145 TEG 147
>dbj|BAA96942.1| unnamed protein product [Arabidopsis thaliana]
Length = 326
Score = 74.3 bits (181), Expect = 6e-12
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 159 FTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGL---ITRDDTVYFL-- 213
F LP++ + LP +F+ L K LPE VT++ G WK+ L DDT F+
Sbjct: 15 FKVYLPDESGDDMVLPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEKFVMV 74
Query: 214 NGWQRFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYFVGKCSHTQTELGGS 273
NGW+R V D LK DFL F ++G S F I++ + C K+ + + E
Sbjct: 75 NGWKRIVKDEDLKGGDFLEFEFDGSSCFHFCIYEHRTMC-KKIRRSSDQSEEIKVESDSD 133
Query: 274 KANETNNSIEEVNTASSDGGVECG 297
+ N+ ++ + ++ D CG
Sbjct: 134 EQNQASDDVLSLDEDDDDSDYNCG 157
Score = 65.1 bits (157), Expect = 3e-09
Identities = 36/87 (41%), Positives = 49/87 (55%), Gaps = 5/87 (5%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLT---ARDDTIYFT--NGWQRFVKDHSLKE 70
LP +F+ L K LP VT++ SG +W + L DDT F NGW+R VKD LK
Sbjct: 29 LPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEKFVMVNGWKRIVKDEDLKG 88
Query: 71 NDFLVFKYNGESLFEVLIFHGDSFCEK 97
DFL F+++G S F I+ + C+K
Sbjct: 89 GDFLEFEFDGSSCFHFCIYEHRTMCKK 115
>dbj|BAB08937.1| unnamed protein product [Arabidopsis thaliana]
gi|15240157|ref|NP_201499.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 334
Score = 73.2 bits (178), Expect = 1e-11
Identities = 41/101 (40%), Positives = 53/101 (51%), Gaps = 5/101 (4%)
Query: 159 FTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDT----VYFLN 214
F LPE +L +P F D L K LP+ L G W + T D V+F
Sbjct: 11 FKVFLPEFGSHELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVFFTK 70
Query: 215 GWQRFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKE 255
GWQ F ND SL+ DFLVF+Y+G+S F V IF + C+K+
Sbjct: 71 GWQSFANDQSLEFGDFLVFSYDGDSRFSVTIFANDG-CKKD 110
Score = 70.5 bits (171), Expect = 8e-11
Identities = 70/268 (26%), Positives = 100/268 (37%), Gaps = 62/268 (23%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDT-----IYFTNGWQRFVKDHSLKE 70
+P F D L+K LP L G +W V T +DT ++FT GWQ F D SL+
Sbjct: 25 IPPAFIDMLEKPLPKEAFLVDEIGRLWCVE-TKTEDTEERFCVFFTKGWQSFANDQSLEF 83
Query: 71 NDFLVFKYNGESLFEVLIFHGDSFCEKAASYFVG-------------------------- 104
DFLVF Y+G+S F V IF D C+K
Sbjct: 84 GDFLVFSYDGDSRFSVTIFANDG-CKKDVGVVSTTDRSRVSLDEEEPDDIFTKPDRMRDC 142
Query: 105 KCGQA--------------------HTEQVCNKGKSSNNSVEEVSTPSNGSVECSL---P 141
CGQ+ E V +S + T + C + P
Sbjct: 143 DCGQSINRKRKRDSVNEDPHVLVDDKPEYVSTYKTKPEHSEKTQRTVNRAGDTCDISWFP 202
Query: 142 EK---SWEEDIYWTHFQFIHFTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVA 198
EK +EE +Y + HF + + Q+L LP TF + +L E++ L G
Sbjct: 203 EKKHNGFEESVYKP--KHPHFVRNITRGSLQKLELPLTFLRSNGIELEEDIELCDESGKK 260
Query: 199 WKIGLITRDDTVYFLN-GWQRFVNDHSL 225
W + ++ D F + W F H +
Sbjct: 261 WPLKILNHDRGFKFSHESWLCFCKSHEM 288
>gb|AAF30309.1| hypothetical protein [Arabidopsis thaliana]
gi|15230649|ref|NP_187267.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 330
Score = 72.4 bits (176), Expect = 2e-11
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
Query: 159 FTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQR 218
FT L + + +P+++ + L + LP+ L G GG WK+ + ++ + VYF GW
Sbjct: 26 FTVFLSHCSSESMVIPRSYYNLLPRPLPKTAILIGTGGRFWKVAMTSKQEQVYFEQGWGN 85
Query: 219 FVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYFVGKCSHTQTELGGSKANET 278
FV D+ LK+ +FL F ++G ++V I+ E A V + S + S + +
Sbjct: 86 FVADNQLKEGEFLTFVFDGHKSYEVSIYGRGDCKETRAVIQVEEISDDTEDDNVSLHSPS 145
Query: 279 NNSIEEVNTASSDGGVECGLYEKFQDLNNIGTPLAVPVETTNEKTFNAGVESDSPELLIA 338
N S++ ++ S L D + + E + E +A + +S E+
Sbjct: 146 NVSLDSLSNDSHHSTSNVSLRSLSNDSLHGDAEIESDSEYSPENLPSASISVESVEV--- 202
Query: 339 DTVTKTTAIQFPYQ 352
V TT+ Q Y+
Sbjct: 203 --VNPTTSRQRSYK 214
Score = 68.2 bits (165), Expect = 4e-10
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+P+++ + L + LP L G G W V +T++ + +YF GW FV D+ LKE +FL
Sbjct: 40 IPRSYYNLLPRPLPKTAILIGTGGRFWKVAMTSKQEQVYFEQGWGNFVADNQLKEGEFLT 99
Query: 76 FKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQVCNKGKSSNNSVEEVSTPSNGS 135
F ++G +EV I+ E A V + + + SN S++ +S S+ S
Sbjct: 100 FVFDGHKSYEVSIYGRGDCKETRAVIQVEEISDDTEDDNVSLHSPSNVSLDSLSNDSHHS 159
>ref|XP_463206.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)] gi|28201561|gb|AAO34499.1| putative
auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 306
Score = 72.0 bits (175), Expect = 3e-11
Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 42/254 (16%)
Query: 14 QALPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDF 73
+ +P F N K+P ++ L+ SG+ ++V +T + +GW +V H LK DF
Sbjct: 44 KTIPNEFLHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAHDLKIGDF 103
Query: 74 LVFKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQVCN------KGKSSNNSVEE 127
LVFKY+G+S + LIF S CEK V G+++ + N K K + S +
Sbjct: 104 LVFKYSGDSQLKTLIF-DSSGCEKVCEKPVDMSGRSYDIAMRNSQDEKKKRKQRDISRQG 162
Query: 128 VSTPSNGSVE------CSLPEKS----WEEDI----------------YWTHFQFIHFTQ 161
PS ++ C LP ++ +++I Y + IH
Sbjct: 163 TVKPSEEGLKAELVPGCILPSRTDLTRLQKNILIEKVKAINSETPIYGYVMNNSSIHGIP 222
Query: 162 LLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIG-LITRDDTVYFLNGWQRFV 220
E K+ + F D V L+ G +W + +T+ ++ FL GW++F
Sbjct: 223 CTVEISKKYADVYLPFEDG-------TVVLQ-HHGKSWNVRCCLTKQNSKRFLKGWRQFA 274
Query: 221 NDHSLKDNDFLVFN 234
D+ L D +F+
Sbjct: 275 GDNKLHLGDICLFD 288
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 173 LPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQRFVNDHSLKDNDFLV 232
+P F N K+P+++ L+ G+ + + + V +GW +V+ H LK DFLV
Sbjct: 46 IPNEFLHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAHDLKIGDFLV 105
Query: 233 FNYNGESHFDVLIFDG---ESFCEK 254
F Y+G+S LIFD E CEK
Sbjct: 106 FKYSGDSQLKTLIFDSSGCEKVCEK 130
>ref|NP_916714.1| P0022F10.13 [Oryza sativa (japonica cultivar-group)]
gi|20160548|dbj|BAB89497.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 402
Score = 72.0 bits (175), Expect = 3e-11
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 158 HFTQLLPEDFKQQLALPKTFSDNLN----------KKLPENVTLKGPGGVAWKIGLITRD 207
HF ++L DFKQ+L +P F ++ K+ TL+GP G W + +
Sbjct: 20 HFFKVLVGDFKQRLKIPPNFCKHIPWEESRKAKGLKEASMAATLEGPSGRTWLVVIRRTA 79
Query: 208 DTVYFLNGWQRFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKE 255
+ +F +GW +FV D +L++ +F+VF Y+G + F ++FD + CE+E
Sbjct: 80 EGTFFTSGWPKFVQDQALRELEFVVFRYDGNTRFTAMVFD-RTACERE 126
Score = 60.5 bits (145), Expect = 9e-08
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 33 TLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLVFKYNGESLFEVLIFHGD 92
TL+GPSG W V + + +FT+GW +FV+D +L+E +F+VF+Y+G + F ++F
Sbjct: 62 TLEGPSGRTWLVVIRRTAEGTFFTSGWPKFVQDQALRELEFVVFRYDGNTRFTAMVFDRT 121
Query: 93 SFCEK 97
+ CE+
Sbjct: 122 A-CER 125
Score = 37.4 bits (85), Expect = 0.78
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 11 NLLQALPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKE 70
+ + P FS + +V L+ P G VW+V L + + GW F + + L+E
Sbjct: 301 SFMMRFPTGFSRQHLPRERTDVVLRDPGGKVWSV-LYIPNTRDRLSRGWCAFARGNCLEE 359
Query: 71 NDFLVFKYNGESLFEVLIF 89
D+ VF+ + F V IF
Sbjct: 360 GDYCVFELVAAAEFRVHIF 378
Score = 35.8 bits (81), Expect = 2.3
Identities = 24/78 (30%), Positives = 34/78 (42%), Gaps = 5/78 (6%)
Query: 171 LALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLI--TRDDTVYFLNGWQRFVNDHSLKDN 228
+ P FS + +V L+ PGG W + I TRD GW F + L++
Sbjct: 304 MRFPTGFSRQHLPRERTDVVLRDPGGKVWSVLYIPNTRD---RLSRGWCAFARGNCLEEG 360
Query: 229 DFLVFNYNGESHFDVLIF 246
D+ VF + F V IF
Sbjct: 361 DYCVFELVAAAEFRVHIF 378
>gb|AAY78874.1| transcriptional factor B3 family protein [Arabidopsis thaliana]
gi|15238622|ref|NP_200821.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 300
Score = 69.3 bits (168), Expect = 2e-10
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 171 LALPKTFSDNLNKKLPENVTLKGPGGVAWKIGL---ITRDDTVYFL--NGWQRFVNDHSL 225
+ LP +F+ L K LPE VT++ G WK+ L DDT F+ NGW+R V D L
Sbjct: 1 MVLPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEKFVMVNGWKRIVKDEDL 60
Query: 226 KDNDFLVFNYNGESHFDVLIFDGESFCEKEASYFVGKCSHTQTELGGSKANETNNSIEEV 285
K DFL F ++G S F I++ + C K+ + + E + N+ ++ + +
Sbjct: 61 KGGDFLEFEFDGSSCFHFCIYEHRTMC-KKIRRSSDQSEEIKVESDSDEQNQASDDVLSL 119
Query: 286 NTASSDGGVECG 297
+ D CG
Sbjct: 120 DEDDDDSDYNCG 131
Score = 65.1 bits (157), Expect = 3e-09
Identities = 36/87 (41%), Positives = 49/87 (55%), Gaps = 5/87 (5%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLT---ARDDTIYFT--NGWQRFVKDHSLKE 70
LP +F+ L K LP VT++ SG +W + L DDT F NGW+R VKD LK
Sbjct: 3 LPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEKFVMVNGWKRIVKDEDLKG 62
Query: 71 NDFLVFKYNGESLFEVLIFHGDSFCEK 97
DFL F+++G S F I+ + C+K
Sbjct: 63 GDFLEFEFDGSSCFHFCIYEHRTMCKK 89
>gb|AAT77042.1| putative transcription factor(auxin response factor) [Oryza sativa
(japonica cultivar-group)]
Length = 536
Score = 69.3 bits (168), Expect = 2e-10
Identities = 45/138 (32%), Positives = 72/138 (51%), Gaps = 7/138 (5%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+P F + K+PG + L+ P+G+++ V +T + GW+ FV H++KE + L+
Sbjct: 43 MPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTLLQCGWEAFVDAHNIKEGESLL 102
Query: 76 FKYNGESLFEVLIFHGDSFCEK---AASYFVGKCGQAHT-EQVCNKGKSSNNSVEEVST- 130
F++ S +EVLI D CEK A G C Q T + V + G SSN++ + +
Sbjct: 103 FRHIENSRYEVLILDSDD-CEKVFSCAGIRNGSCVQDKTVDPVDSSGSSSNDTTQSSRSR 161
Query: 131 -PSNGSVECSLPEKSWEE 147
N + CS EKS E+
Sbjct: 162 NTENLTAMCSSSEKSGED 179
Score = 61.2 bits (147), Expect = 5e-08
Identities = 36/136 (26%), Positives = 64/136 (46%), Gaps = 8/136 (5%)
Query: 159 FTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQR 218
F + + D + +P F + K+P + L+ P G+ + + + + GW+
Sbjct: 29 FLRRMAADSMHSMIMPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTLLQCGWEA 88
Query: 219 FVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKE---ASYFVGKCSHTQT----ELG 271
FV+ H++K+ + L+F + S ++VLI D + CEK A G C +T +
Sbjct: 89 FVDAHNIKEGESLLFRHIENSRYEVLILDSDD-CEKVFSCAGIRNGSCVQDKTVDPVDSS 147
Query: 272 GSKANETNNSIEEVNT 287
GS +N+T S NT
Sbjct: 148 GSSSNDTTQSSRSRNT 163
>ref|XP_463202.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)] gi|28201553|gb|AAO34491.1| putative
auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 1029
Score = 68.6 bits (166), Expect = 3e-10
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 150 YW-THFQFIHFTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDD 208
+W T Q +F +++ F++Q+ +P F++N ++ + LK G + + +
Sbjct: 140 FWDTDDQDTYFFKVMIGGFRRQMTIPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSN 199
Query: 209 TVYFLNGWQRFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYFVGKCSHTQT 268
+ GW F N H +K DFLVF Y G S F+V IFD S C K A SH
Sbjct: 200 KLVLTKGWAEFANSHDIKMGDFLVFRYTGNSQFEVKIFD-PSGCVKAA-------SHNAV 251
Query: 269 ELGGSKANETNNSIE 283
+G N + IE
Sbjct: 252 NIGQHAQNMQGDPIE 266
Score = 67.0 bits (162), Expect = 9e-10
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+P F++N + ++ G + LK +G +V + + + T GW F H +K DFLV
Sbjct: 164 IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFANSHDIKMGDFLV 223
Query: 76 FKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQ 108
F+Y G S FEV IF S C KAAS+ GQ
Sbjct: 224 FRYTGNSQFEVKIF-DPSGCVKAASHNAVNIGQ 255
Score = 64.7 bits (156), Expect = 5e-09
Identities = 47/135 (34%), Positives = 65/135 (47%), Gaps = 12/135 (8%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+P F + K+P + L+ G ++V +T I +GW+ FV H L+ DFLV
Sbjct: 748 IPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLV 807
Query: 76 FKYNGESLFEVLIFHGDSFCEKAASYFVGK----CGQAHTEQVCNKGKSSNNSVEEVSTP 131
F Y+G S +VLIF G S CEK S K CG+ E + SSN+ V +P
Sbjct: 808 FSYDGISKLKVLIF-GPSGCEKVHSRSTLKNATHCGEKWEEPL---HISSNSHDLPVKSP 863
Query: 132 SNGSVECSLPEKSWE 146
N S EK W+
Sbjct: 864 QN----VSKSEKQWD 874
Score = 63.5 bits (153), Expect = 1e-08
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+P F+ + K + + L+ SG ++V +T + + + +GW+ FV H L DFLV
Sbjct: 467 IPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLV 526
Query: 76 FKYNGESLFEVLIFHGDSFCEKAAS 100
FKYNG+ L +VLIF S CEK+ S
Sbjct: 527 FKYNGDFLLQVLIF-DPSGCEKSTS 550
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 158 HFTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQ 217
+F +++ DF +++ +P F+ + + + + L+ G + + + + + + +GW+
Sbjct: 452 YFFKVMIGDFHKRMTIPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWE 511
Query: 218 RFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEAS 257
FVN H L DFLVF YNG+ VLIFD S CEK S
Sbjct: 512 SFVNAHDLNMGDFLVFKYNGDFLLQVLIFD-PSGCEKSTS 550
Score = 61.2 bits (147), Expect = 5e-08
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 155 QFIHFTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLN 214
Q+ +F +++ F++++ +P F K+P + L+ G + + + + +
Sbjct: 730 QYKNFFKVMIGRFRERMIIPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQS 789
Query: 215 GWQRFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEK 254
GW+ FV H L+ DFLVF+Y+G S VLIF G S CEK
Sbjct: 790 GWKAFVTAHDLQMGDFLVFSYDGISKLKVLIF-GPSGCEK 828
>emb|CAB67638.1| putative protein [Arabidopsis thaliana] gi|11357788|pir||T45871
hypothetical protein F4P12.10 - Arabidopsis thaliana
Length = 283
Score = 67.8 bits (164), Expect = 5e-10
Identities = 48/202 (23%), Positives = 85/202 (41%), Gaps = 11/202 (5%)
Query: 159 FTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQR 218
F L E + L +P F L LP+ V L+G GG W + L Y GW +
Sbjct: 12 FKVFLVESASESLMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPK 71
Query: 219 FVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYFVGKCSHTQTELGGSKANET 278
F +H LK+ +F+ F Y+G F+V +FD E A S + ++ ++
Sbjct: 72 FAEEHELKNGEFMTFVYDGHRTFEVSVFDRWGSKEVRAEIQAIPLSDSDSDSVVEDEKDS 131
Query: 279 NNSIEEVNTASSDGGV-ECGLYEKFQDLNNIGTPL----------AVPVETTNEKTFNAG 327
+ +E+ + D + G +++ ++++ P+ + VE F
Sbjct: 132 TDVVEDDDDEDEDEDEDDDGSFDEDEEISQSLYPIDEETATDAAGNLDVEALTNPHFPTT 191
Query: 328 VESDSPELLIADTVTKTTAIQF 349
+++ ELLI V K ++F
Sbjct: 192 LKNRIYELLIPANVVKDNNLEF 213
Score = 63.9 bits (154), Expect = 8e-09
Identities = 35/112 (31%), Positives = 50/112 (44%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+P F L LP V L+G G +W V L Y T GW +F ++H LK +F+
Sbjct: 26 IPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHELKNGEFMT 85
Query: 76 FKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQVCNKGKSSNNSVEE 127
F Y+G FEV +F E A + ++ V K S + VE+
Sbjct: 86 FVYDGHRTFEVSVFDRWGSKEVRAEIQAIPLSDSDSDSVVEDEKDSTDVVED 137
>ref|NP_200822.1| transcriptional factor B3 family protein [Arabidopsis thaliana]
Length = 328
Score = 67.4 bits (163), Expect = 7e-10
Identities = 48/166 (28%), Positives = 75/166 (44%), Gaps = 20/166 (12%)
Query: 150 YWTHFQFIHFTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDT 209
Y F F LP + L LP +F+ L K LP+ VT++ G WK+G
Sbjct: 7 YSNGFTSKFFKPYLPSESGDDLVLPISFNSCLPKSLPKTVTVRSISGNIWKLGFKKCGGE 66
Query: 210 V---YFLNGWQRFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEK-----EASYFVG 261
V ++GW++ V D +L D L F ++G F+ IFD E+ C++ E S +
Sbjct: 67 VERFVMVSGWKKIVRDENLNGGDLLSFEFDGSHFFNFSIFDHETTCKRLKRSSEQSKDII 126
Query: 262 KCSHTQTE----------LGGSKANETNN--SIEEVNTASSDGGVE 295
K E L +++++N S+E+ N A D G+E
Sbjct: 127 KVGSDCEEESQASDDVIVLNSDDSDDSDNDYSVEDDNVAEDDDGLE 172
Score = 55.5 bits (132), Expect = 3e-06
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLT---ARDDTIYFTNGWQRFVKDHSLKEND 72
LP +F+ L K LP VT++ SG +W +G + +GW++ V+D +L D
Sbjct: 30 LPISFNSCLPKSLPKTVTVRSISGNIWKLGFKKCGGEVERFVMVSGWKKIVRDENLNGGD 89
Query: 73 FLVFKYNGESLFEVLIFHGDSFCEK 97
L F+++G F IF ++ C++
Sbjct: 90 LLSFEFDGSHFFNFSIFDHETTCKR 114
>gb|AAM65128.1| unknown [Arabidopsis thaliana] gi|18409814|ref|NP_566984.1|
transcriptional factor B3 family protein [Arabidopsis
thaliana]
Length = 286
Score = 66.6 bits (161), Expect = 1e-09
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 14/205 (6%)
Query: 159 FTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQR 218
F L E + L +P F L LP+ V L+G GG W + L Y GW +
Sbjct: 12 FKVFLVESASESLMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPK 71
Query: 219 FVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYFVGKCSHTQTELGGSKANET 278
F +H LK+ +F+ F Y+G F+V +FD E A S + ++ ++
Sbjct: 72 FAEEHELKNGEFMTFVYDGHRTFEVSVFDRWGSKEVRAEIQAIPLSDSDSDSVVEDEKDS 131
Query: 279 NNSIEEVNTASSDGGV-ECGLYEKFQDLNNIGTPL-------------AVPVETTNEKTF 324
+ +E+ + D + G +++ ++++ P+ + VE F
Sbjct: 132 TDVVEDDDDEDEDEDEDDDGSFDEDEEISQSLYPIDEETATDAAVFEGNLDVEALTNPHF 191
Query: 325 NAGVESDSPELLIADTVTKTTAIQF 349
+++ ELLI V K ++F
Sbjct: 192 PTTLKNRIYELLIPANVVKDNNLEF 216
Score = 63.9 bits (154), Expect = 8e-09
Identities = 35/112 (31%), Positives = 50/112 (44%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+P F L LP V L+G G +W V L Y T GW +F ++H LK +F+
Sbjct: 26 IPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHELKNGEFMT 85
Query: 76 FKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQVCNKGKSSNNSVEE 127
F Y+G FEV +F E A + ++ V K S + VE+
Sbjct: 86 FVYDGHRTFEVSVFDRWGSKEVRAEIQAIPLSDSDSDSVVEDEKDSTDVVED 137
>emb|CAB51188.1| putative protein [Arabidopsis thaliana]
gi|15232646|ref|NP_190261.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
gi|7487758|pir||T12971 hypothetical protein T6H20.200 -
Arabidopsis thaliana
Length = 276
Score = 65.1 bits (157), Expect = 3e-09
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 5/210 (2%)
Query: 26 KKLPGNVTLKG-PSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLVFKYNGESLF 84
K LP VT+K SG +W + + A +T++ +GW++ VKD ++ E FL F+++G +F
Sbjct: 48 KPLPRKVTVKSVSSGNIWRMEMKANGNTVFLRDGWKKIVKDENVTEPIFLEFEFDGYGVF 107
Query: 85 EVLIFHGDSFCEKAASYFVGKCGQAHTEQVCNKGKSSNNSVEEVSTPSNGSVECSLPEKS 144
++ S C++ S + + +E+ G + E S G+ K+
Sbjct: 108 HFCVYEYGSMCKRMRSPMEKEVIKVDSEEDVLVGNEESTKGLEESPRRGGTSRRRAKLKT 167
Query: 145 WEEDIYWTHFQFIHFTQLLPEDFKQ-QLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGL 203
IY H P D Q + +P + N P V ++ G+ + +
Sbjct: 168 KSHKIY-EHLD-NKLNPSFPVDMTQNRTRIPSLLIKDYNLTFPNMVIMRDKIGILKRRIV 225
Query: 204 ITRDDTVYFLNGWQRFVNDHSLKDNDFLVF 233
I ++ +VY LNG + + +K + +VF
Sbjct: 226 IWKNRSVY-LNGIGSIIRRNHVKPGNEVVF 254
Score = 53.5 bits (127), Expect = 1e-05
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 18/189 (9%)
Query: 159 FTQLLPEDFKQQLALPKTFSDNLNKKLPENVTLKG-PGGVAWKIGLITRDDTVYFLNGWQ 217
F +P + LP K LP VT+K G W++ + +TV+ +GW+
Sbjct: 24 FRVYIPNQTADDMNLPLVSDKISGKPLPRKVTVKSVSSGNIWRMEMKANGNTVFLRDGWK 83
Query: 218 RFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYF---VGKCSHTQTELGGSK 274
+ V D ++ + FL F ++G F +++ S C++ S V K + L G++
Sbjct: 84 KIVKDENVTEPIFLEFEFDGYGVFHFCVYEYGSMCKRMRSPMEKEVIKVDSEEDVLVGNE 143
Query: 275 ANETNNSIEEV----NTASSDGGVECGLYEKFQDLNNIGTPLAVPVETTNEKTFNAGVES 330
E+ +EE T+ ++ ++ ++ L+N P + PV+ T +T
Sbjct: 144 --ESTKGLEESPRRGGTSRRRAKLKTKSHKIYEHLDNKLNP-SFPVDMTQNRT------- 193
Query: 331 DSPELLIAD 339
P LLI D
Sbjct: 194 RIPSLLIKD 202
>gb|AAM76973.1| reduced vernalization response 1 [Arabidopsis thaliana]
gi|21734794|gb|AAM76972.1| reduced vernalization
response 1 [Arabidopsis thaliana]
gi|30685150|ref|NP_188529.2| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 341
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/75 (41%), Positives = 42/75 (55%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+P F K +L V L P G VW VGL D+ I+F +GWQ FV +S++ L+
Sbjct: 22 VPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLI 81
Query: 76 FKYNGESLFEVLIFH 90
F+Y G S F V IF+
Sbjct: 82 FRYEGNSAFSVYIFN 96
Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 168 KQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQRFVNDHSLKD 227
+++L +P F +L V L P G W++GL D+ ++F +GWQ FV+ +S++
Sbjct: 17 EKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRI 76
Query: 228 NDFLVFNYNGESHFDVLIFD 247
L+F Y G S F V IF+
Sbjct: 77 GYLLIFRYEGNSAFSVYIFN 96
>ref|XP_481619.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|38636994|dbj|BAD03253.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|38637418|dbj|BAD03676.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 391
Score = 63.2 bits (152), Expect = 1e-08
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 158 HFTQLLPEDFK---------QQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDD 208
HF L+ DF+ +QL +PK F L +PE + L+ ++ + + +
Sbjct: 25 HFLLLMMGDFQHEIRGEQIVEQLTIPKEFVQRLKGDIPEEIQLETHNRNSYTVRVDKSQE 84
Query: 209 TVYFLNGWQRFVNDHSLKDNDFLVFNYNGESHFDVLIFDGESFCEKEASYFVGKCSHTQT 268
V F GW +FV L D ++F + G S FDV+IFD + EK S V
Sbjct: 85 KVIFAAGWAQFVKTFDLHMGDSMMFRFKGNSQFDVIIFD-QVGREKVCSVAVDDYLDPNV 143
Query: 269 ELGGSKANET-NNSIEEVNTASSDGGVECGLYEKFQDLNNI-GTPLAVPVETTNEKTFNA 326
+ G + A ET N+S D V+ G + LN+ +P++T +T N+
Sbjct: 144 QEGRTDATETLNSSRAHSQDDYLDPNVQEGRTNATETLNSSRAHSQPMPMQTPATETLNS 203
Query: 327 GVESDSPELLIADTVTKT 344
+ S ++ + T+T
Sbjct: 204 S-RAHSQDMPMQSPATET 220
Score = 49.7 bits (117), Expect = 2e-04
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 16 LPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLV 75
+PK F LK +P + L+ + + V + + + F GW +FVK L D ++
Sbjct: 49 IPKEFVQRLKGDIPEEIQLETHNRNSYTVRVDKSQEKVIFAAGWAQFVKTFDLHMGDSMM 108
Query: 76 FKYNGESLFEVLIF 89
F++ G S F+V+IF
Sbjct: 109 FRFKGNSQFDVIIF 122
>gb|AAX23816.1| hypothetical protein At2g16210 [Arabidopsis thaliana]
gi|42569068|ref|NP_179217.2| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 291
Score = 62.4 bits (150), Expect = 2e-08
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 156 FIHFTQLLPEDFKQQLALPKTFSDNL-NKKLPENVTLKGPGGVAWKIGLITRDDTVYFL- 213
F Q + + + ALP FS + +K+L + ++ G +W++G I+++ YF+
Sbjct: 19 FFKVVQSINVSSENKRALPHDFSRSFTDKELSRKMKIRAQWGNSWEVG-ISKNPRFYFME 77
Query: 214 -NGWQRFVNDHSLKDNDFLVFNYNGESHFDVLIF--DGESFCE-KEASYFVGKCSHTQTE 269
+GW++FV D++L +++ L F + G+ HF V IF DG+ + ++ F S +TE
Sbjct: 78 KSGWEKFVRDNALGNSELLTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFASSSRIKTE 137
Query: 270 LGGSKANETNNSIEEVNTASSDGGVECGLYEKFQDLN 306
+ N I+E SS+ G K + LN
Sbjct: 138 -------QEENDIKEEVVVSSNRGQTTAAESKGRKLN 167
Score = 50.4 bits (119), Expect = 9e-05
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 38/262 (14%)
Query: 4 SLNWKSINLLQALPKTFSDNLK-KKLPGNVTLKGPSGVVWNVGLTARDDTIYFT--NGWQ 60
S+N S N +ALP FS + K+L + ++ G W VG++ ++ YF +GW+
Sbjct: 25 SINVSSENK-RALPHDFSRSFTDKELSRKMKIRAQWGNSWEVGIS-KNPRFYFMEKSGWE 82
Query: 61 RFVKDHSLKENDFLVFKYNGESLFEVLIFHGDS---FCEKAASYFVGKCGQAHTEQVCNK 117
+FV+D++L ++ L F + G+ F V IF D + F + TEQ N
Sbjct: 83 KFVRDNALGNSELLTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFASSSRIKTEQEEND 142
Query: 118 GKS----SNNSVEEVSTPSNGSVECSLPEKSWEEDIYWTHFQFI---------------- 157
K S+N + + S G + +L +++ +E + +
Sbjct: 143 IKEEVVVSSNRGQTTAAESKGR-KLNLGKRAAKESQSSKRTEKVVRARSDYAGASSSTAA 201
Query: 158 HFTQLLPEDFKQQLALPKTFSDNLNKKLPENVT---LKGPGG-VAWKIGLITRDDTVYFL 213
FT L + + L +P + S + ++P+ T + P G +W + + R F
Sbjct: 202 AFTILFKQGYLVFLRIPNSVSKD---QVPDEKTVFKIHHPNGKKSWNVVYLERFGA--FS 256
Query: 214 NGWQRFVNDHSLKDNDFLVFNY 235
GW+R V ++ L D F +
Sbjct: 257 GGWRRVVKEYPLAVGDTCKFTF 278
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 717,795,215
Number of Sequences: 2540612
Number of extensions: 32420866
Number of successful extensions: 72024
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 71724
Number of HSP's gapped (non-prelim): 271
length of query: 385
length of database: 863,360,394
effective HSP length: 130
effective length of query: 255
effective length of database: 533,080,834
effective search space: 135935612670
effective search space used: 135935612670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)
Medicago: description of AC148404.4