BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148404.10 + phase: 0
(400 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM61120.1| unknown [Arabidopsis thaliana] 288 2e-76
gb|AAP21272.1| At1g47310 [Arabidopsis thaliana] gi|18401665|ref|... 286 1e-75
gb|AAP50957.1| hypothetical protein [Oryza sativa (japonica cult... 192 1e-47
gb|AAO50694.1| unknown protein [Arabidopsis thaliana] gi|2839330... 114 7e-24
ref|NP_916280.1| OSJNBb0053G03.14 [Oryza sativa (japonica cultiv... 101 4e-20
dbj|BAB11418.1| unnamed protein product [Arabidopsis thaliana] 64 6e-09
gb|AAC49976.1| ORF; able to induce HR-like lesions [Nicotiana ta... 48 6e-04
emb|CAG04335.1| unnamed protein product [Tetraodon nigroviridis] 40 0.17
ref|YP_173834.1| succinate-semialdehyde dehydrogenase [Bacillus ... 37 0.82
ref|NP_346554.1| choline binding protein PcpA [Streptococcus pne... 37 1.1
ref|ZP_00323712.1| hypothetical protein PpenA01000321 [Pediococc... 37 1.1
ref|NP_359536.1| Choline-binding protein [Streptococcus pneumoni... 37 1.1
ref|YP_179599.1| capsular polysaccharide ABC transporter, peripl... 35 3.1
ref|NP_001009628.1| hypothetical protein LOC288001 [Rattus norve... 35 4.1
gb|AAB61052.1| Hypothetical protein F2P16.15 [Arabidopsis thalia... 35 4.1
dbj|BAB80714.1| conserved hypothetical protein [Clostridium perf... 35 4.1
gb|AAA41570.1| alpha-1 major acute phase protein prepeptide 35 4.1
ref|XP_549828.1| putative protein kinase [Oryza sativa (japonica... 34 9.1
ref|XP_549827.1| putative protein kinase [Oryza sativa (japonica... 34 9.1
>gb|AAM61120.1| unknown [Arabidopsis thaliana]
Length = 395
Score = 288 bits (737), Expect = 2e-76
Identities = 167/387 (43%), Positives = 240/387 (61%), Gaps = 11/387 (2%)
Query: 19 FLQLFTAFSNASSSSSSTHSNITH--IFQDILKAISSRQKWDLNDVRVFNFDVAKIRFGT 76
F+Q+ T + A S SNIT I QD+LK IS +QKW+L +VR +V KIR GT
Sbjct: 15 FIQVLT-LAVALDPSQPDESNITATPILQDVLKEISVKQKWNLEEVRFSKLEVKKIRIGT 73
Query: 77 SQNYLFRIGSSKNNFTVKFSDEISSWNHNKFTTTPKPDLASLVDQLSSIAFLDY-IKLEG 135
S+ + RI K+ F F DE++ W + +L LV +++S LD + L+G
Sbjct: 74 SRRFEIRIRLGKSRFVFIFPDEVTDWRRSGGGRDV--ELQELVREVNSSKVLDPPLVLKG 131
Query: 136 PFELRVHESHHLSLSLPMNVSYNGLKHIIVGKGITVEVRRAREISFYYQSDLDLQRNGSV 195
PFELRV LSLSLPMN+S++GLK ++V +GI+VE+R A+ +S ++ S
Sbjct: 132 PFELRVDGDDRLSLSLPMNISHSGLKRVLVSEGISVEIREAQAVSLFHSSHRRYAATVDP 191
Query: 196 ICSNQKNEFWPFLQSMCVPLIPIRIIGSASLIAYVARNPYVQIGTALISEDAVELLPEKC 255
+ Q + W F S+CVPL PI+IIGSASL+A+ N QI T+ +S++A+ L EKC
Sbjct: 192 VNIKQGSSLWSFWGSVCVPLPPIQIIGSASLVAFRTSNATTQIKTSYLSDEAIHLYAEKC 251
Query: 256 YHGC-VFRKQACPVASLNLRLILLEKILRSLLGHKILQDRLSGLIKANIKAYAGVKFPLE 314
Y+ +R+ P L L++ LEK+L S LG+ Q S + A +KA V+F LE
Sbjct: 252 YYKAHTYRQHRFPNDLLGLKIHKLEKVLNS-LGNGTRQTVSS--VTAKLKASGMVRFQLE 308
Query: 315 LERDVG-NNATLSTLPDWRTRPSVERVWFEVMARVEDSRLKPLSIKKVKPFIESDSVSWA 373
+ER +G N + +S WRT+P +ERVWFEV A++E +LK + ++KV PFIE D+ +W+
Sbjct: 309 IERSIGKNESVISKKVAWRTKPKIERVWFEVTAKIEGDKLKAVRLRKVVPFIEVDTEAWS 368
Query: 374 NLMSNLSYTKLRPVLLPPEALTLDVKW 400
+LMSN+S+TK +L+P EALTLDVKW
Sbjct: 369 SLMSNMSFTKFPSLLVPQEALTLDVKW 395
>gb|AAP21272.1| At1g47310 [Arabidopsis thaliana] gi|18401665|ref|NP_564503.1|
expressed protein [Arabidopsis thaliana]
gi|25373240|pir||H96513 hypothetical protein T3F24.7
[imported] - Arabidopsis thaliana
gi|9993349|gb|AAG11422.1| Unknown protein [Arabidopsis
thaliana]
Length = 395
Score = 286 bits (731), Expect = 1e-75
Identities = 166/387 (42%), Positives = 241/387 (61%), Gaps = 11/387 (2%)
Query: 19 FLQLFTAFSNASSSSSSTHSNITH--IFQDILKAISSRQKWDLNDVRVFNFDVAKIRFGT 76
F+Q+ T + A S SNIT I QD+LK IS +QKW+L +VR +V KIR GT
Sbjct: 15 FIQVLT-LAVALDPSQPDESNITATPILQDVLKEISVKQKWNLEEVRFSKLEVKKIRIGT 73
Query: 77 SQNYLFRIGSSKNNFTVKFSDEISSWNHNKFTTTPKPDLASLVDQLSSIAFLDY-IKLEG 135
S+ + RI K+ F F DEI+ W + + +L LV +++S LD + L+G
Sbjct: 74 SRRFEIRIRLGKSRFVFIFPDEITDWRRSGGGSDV--ELQELVREVNSSKVLDPPLVLKG 131
Query: 136 PFELRVHESHHLSLSLPMNVSYNGLKHIIVGKGITVEVRRAREISFYYQSDLDLQRNGSV 195
PFEL V + LSLSLPMN+S++GLK ++V +GI+VE+R A+ +S ++ S
Sbjct: 132 PFELLVDGNDRLSLSLPMNISHSGLKRVLVSEGISVEIREAQAVSLFHSSHRRYAATVDP 191
Query: 196 ICSNQKNEFWPFLQSMCVPLIPIRIIGSASLIAYVARNPYVQIGTALISEDAVELLPEKC 255
+ + + W F S+CVPL PI+IIGSASL+A+ N QI T+ +S++A+ L EKC
Sbjct: 192 VNIKEGSSLWSFWGSVCVPLPPIQIIGSASLVAFRTSNATTQIKTSYLSDEAIHLYAEKC 251
Query: 256 YHGC-VFRKQACPVASLNLRLILLEKILRSLLGHKILQDRLSGLIKANIKAYAGVKFPLE 314
Y+ +R+ P L L++ LEK+L S LG+ Q S + A +KA V+F LE
Sbjct: 252 YYKAHTYRQHRFPNDLLGLKIHKLEKVLNS-LGNGTRQTVSS--VTAKLKASGMVRFQLE 308
Query: 315 LERDVG-NNATLSTLPDWRTRPSVERVWFEVMARVEDSRLKPLSIKKVKPFIESDSVSWA 373
+ER +G N + +S WRT+P +ERVWFEV A++E +LK + ++KV PFIE D+ +W+
Sbjct: 309 IERSIGKNESVISKKVAWRTKPKIERVWFEVTAKIEGDKLKAVRLRKVVPFIEVDTEAWS 368
Query: 374 NLMSNLSYTKLRPVLLPPEALTLDVKW 400
+LMSN+S+TK +L+P EALTLDVKW
Sbjct: 369 SLMSNMSFTKFPSLLVPQEALTLDVKW 395
>gb|AAP50957.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50918989|ref|XP_469891.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 425
Score = 192 bits (489), Expect = 1e-47
Identities = 132/399 (33%), Positives = 206/399 (51%), Gaps = 27/399 (6%)
Query: 24 TAFSNASSSSSSTHSNITHI------FQDILKAISSRQKWDLN-DVRVFNFDVAKIRFGT 76
TA SNAS S+ S + ++++ A+S + WD + +VRV+ D R G
Sbjct: 32 TASSNASLSTFSDSDPEPELAREPTFLEEVIDAVSEKYDWDPDAEVRVWPLDADAARVGA 91
Query: 77 SQNYLFRIGSSKNNFTVKFSDEISSWNHNKFTTTPKPDLASLVDQLSSIAFLDY------ 130
Q Y FR + + V+ +DE W H + D +D + L +
Sbjct: 92 VQRYEFRARAGSASALVRLADESVEWRHPAAPAVEEVDGPDGLDVVPGDGALGFRPGVRD 151
Query: 131 IKLEGPFELRVH---ESHHLSLSLPM-NVSYNGLKHIIVGKGITVEVRRAREISFYYQSD 186
+ L GP E+RV + + L LP N +Y GLK +IV G+ ++V A+++ F +
Sbjct: 152 VDLVGPVEVRVASGGDGGSIELQLPSRNATYAGLKRVIVAAGVALKVIGAQKVIFTHPHS 211
Query: 187 LDLQRNGSVICSNQK-NEFWPFLQSMCVPLIPIRIIGSASLIAYVARNPYVQIGTALISE 245
+ L NGS++ SN + WP + C P++ + ++GS ++ N +G S
Sbjct: 212 IGLLTNGSLLASNNDPSRIWPLSYATCAPILQVSVVGSVMIVV----NESNVLGRRR-SH 266
Query: 246 DAVELLPEKCYHGCVFRK-QACPVASLNLRLILLEKILRSLLGHKILQDRLSGLIKANIK 304
D VELL EKC R C S++ RL L+KIL++ +K + I+A +
Sbjct: 267 DTVELLSEKCEVDVANRLISVCVFCSISSRLPRLDKILKTWFSNKTQDSKSMQFIQAKVT 326
Query: 305 AYAGVKFPLELERDVGNNATL-STLPDWRTRPSVERVWFEVMARVEDS-RLKPLSIKKVK 362
+ +KF LELERD+ + + W+T P V+RV +V+A+VE+ RLK +S+KKVK
Sbjct: 327 SIPLIKFRLELERDITEEDGIWENISKWKTVPMVQRVALDVVAKVEEEGRLKAMSVKKVK 386
Query: 363 -PFIESDSVSWANLMSNLSYTKLRPVLLPPEALTLDVKW 400
P+ D+ SW++L SN+S+TK +LPPE LTLDVKW
Sbjct: 387 KPYPVVDASSWSSLTSNISFTKFMSFVLPPEPLTLDVKW 425
>gb|AAO50694.1| unknown protein [Arabidopsis thaliana] gi|28393303|gb|AAO42078.1|
unknown protein [Arabidopsis thaliana]
gi|42568768|ref|NP_201256.2| expressed protein
[Arabidopsis thaliana]
Length = 424
Score = 114 bits (284), Expect = 7e-24
Identities = 104/419 (24%), Positives = 188/419 (44%), Gaps = 48/419 (11%)
Query: 19 FLQLFTAFSNASSSSSSTHSNITH--IFQDILKAISSRQKWDLNDVRVFNFDVAKIRFGT 76
FL LFT F ++S+ SS +N + D+ ++I + +V+V FD+ G
Sbjct: 13 FLILFTIFPSSSALISSPDANPPYPKAISDLKESIVKGLGFQSEEVKVSGFDIRDALVGH 72
Query: 77 SQNYLFRIGSSKNNFTVKFSDEISSWNHNKFTT--TPKPDLASLVDQLSSIAFLDYI--- 131
S +Y F + K ++++ W + +P LV + D +
Sbjct: 73 SVSYEFDLEIDNKVLPFKLLEDVNRWEYVDLPIFQVEQPSENGLVPMRNKKTSSDDVLPV 132
Query: 132 ----KLEGPFELRVHESHHLSLSLPMNVSYNGLKHIIVGKGITVEVRRAREISFYYQSDL 187
+L GP EL + +++++ LSLP +V LK +I+ G V V+ AR +S + DL
Sbjct: 133 LAPFQLSGPMELWIQDANNMRLSLPYDVDAGVLKKVILADGAVVTVKGARSVSLRHPIDL 192
Query: 188 DLQRNGSVICSNQKNEFWPFLQSMC-----------VPLIPIRIIGSASLIAYVARNPYV 236
L N S NEF L S+ P++ +RI+G SL A +++P
Sbjct: 193 PLPLNQS------SNEFASGLLSLAEQLRRASTDQESPVLSLRIVGPTSL-ASTSQSPDN 245
Query: 237 QIGTALISEDAVEL------------LPEKCYHGCVFRKQ---ACPVASL---NLRLILL 278
++ ++ VEL + + ++ P+ S+ N L+
Sbjct: 246 KLKLKRLAPGLVELSSMSKDKRSLSTIGANAMTTVLTPREFTTMWPITSINGSNANLLGF 305
Query: 279 EKILRSLLGHKILQDRLSGLIKANIKAYAGVKFPLELERDVGN-NATLSTLPDWRTRPSV 337
EK+L S+LG K + ++KA + A +K +E+ + + + P+WRT+P
Sbjct: 306 EKLLTSVLGPKAQEKGSFKVLKAKVAAQTFMKIGFGIEKKLKEADVEGLSFPEWRTKPET 365
Query: 338 ERVWFEVMARVEDSRLKPLSIKKVKPFIESDSVSWANLMSNLSYTKLRPVLLPPEALTL 396
R+ FEV+A+V+ + P ++ +V P D+++ + N++ +KL + PP TL
Sbjct: 366 MRMHFEVLAKVDGENVIPENVMRVDPIPLEDTIAQNVITGNVTMSKLPIIESPPSPFTL 424
>ref|NP_916280.1| OSJNBb0053G03.14 [Oryza sativa (japonica cultivar-group)]
gi|53793556|dbj|BAD53326.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|22535590|dbj|BAC10765.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 422
Score = 101 bits (252), Expect = 4e-20
Identities = 102/416 (24%), Positives = 179/416 (42%), Gaps = 28/416 (6%)
Query: 8 RLHQLPFFIIFFLQLFTAFSNASSSSSSTHSNITHIFQDILKAISSRQKWDLNDVRVFNF 67
R+ LP ++ + +SSS++ + D+ +AI + +++V F
Sbjct: 8 RILALPLALLLAVGSSPGLVRQASSSAAAKPPVPKAISDLREAIVKGLGFQSEELKVSGF 67
Query: 68 DVAKIRFGTSQNYLFRIGSSKNNFTVKFSDEISSWNHNK---FTTTPKPDLASLVD---- 120
DV G + Y F I + V+ ++++ W+ F + D +L +
Sbjct: 68 DVRDALVGQAVAYEFDIEVGRKVVPVRLLEDVNRWDFVDLPIFRSQADADDTALAEIRRG 127
Query: 121 QLSSIAF---LDYIKLEGPFELRVHESHHLSLSLPMNVSYNGLKHIIVGKGITVEVRRAR 177
+ AF L +L GP EL + + + L+LP +V LK +++ G V V+ A+
Sbjct: 128 KSGKRAFDPTLPPFQLAGPMELWIQDGDDVRLALPHDVEAGTLKKVVLSDGAVVTVKGAK 187
Query: 178 EISFYYQSDLDLQRNGSVICSNQKN------EFWPFLQSMCVPLIPIRIIGSASLIAYVA 231
+S +L L N + + +S PL+ +RI G SL + +
Sbjct: 188 AVSLRLPLELPLPLNRTTYKGRLSSLISIAQTLRGAARSNQKPLLSLRIEGPTSLSSTPS 247
Query: 232 RNPYVQI-------GTALISEDAVELLPEKCYHGCVFRKQACPVASLNLR---LILLEKI 281
+P ++ G +S A+ + + G P+ SLN L E++
Sbjct: 248 MSPNDRLKLKRLAPGQVELSSRAIPAVTDDDGDGS-HAAGLWPLLSLNGSDGSLQGFEEL 306
Query: 282 LRSLLGHKILQDRLSGLIKANIKAYAGVKFPLELERDVGNN-ATLSTLPDWRTRPSVERV 340
L S+LG K + L+KA A VK +E+ + + S P+W+T+P R
Sbjct: 307 LASVLGKKAGEKGTFKLLKARASAQTYVKMGFAVEKRIADGEVNWSNFPEWKTKPKKLRA 366
Query: 341 WFEVMARVEDSRLKPLSIKKVKPFIESDSVSWANLMSNLSYTKLRPVLLPPEALTL 396
+EV+ARVE + P I +V+PF +++S + L N+S +K V PP TL
Sbjct: 367 HYEVLARVEGGQAIPERIAQVQPFEADEAMSESVLTGNVSMSKTEVVHPPPVYFTL 422
>dbj|BAB11418.1| unnamed protein product [Arabidopsis thaliana]
Length = 163
Score = 64.3 bits (155), Expect = 6e-09
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 267 PVASLN---LRLILLEKILRSLLGHKILQDRLSGLIKANIKAYAGVKFPLELERDVGN-N 322
P+ S+N L+ EK+L S+LG K + ++KA + A +K +E+ + +
Sbjct: 30 PITSINGSNANLLGFEKLLTSVLGPKAQEKGSFKVLKAKVAAQTFMKIGFGIEKKLKEAD 89
Query: 323 ATLSTLPDWRTRPSVERVWFEVMARVEDSRLKPLSIKKVKPFIESDSVSWANLMSNLSYT 382
+ P+WRT+P R+ FEV+A+V+ + P ++ +V P D+++ + N++ +
Sbjct: 90 VEGLSFPEWRTKPETMRMHFEVLAKVDGENVIPENVMRVDPIPLEDTIAQNVITGNVTMS 149
Query: 383 KLRPVLLPPEALTL 396
KL + PP TL
Sbjct: 150 KLPIIESPPSPFTL 163
>gb|AAC49976.1| ORF; able to induce HR-like lesions [Nicotiana tabacum]
gi|7489145|pir||T03813 hypothetical protein (clone NF24)
- common tobacco
Length = 126
Score = 47.8 bits (112), Expect = 6e-04
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 267 PVASLN---LRLILLEKILRSLLGHKILQDRLSGLIKANIKAYAGVKFPLELERDV--GN 321
PV S+N L+ E +L ++LG K Q L+KA++ A VK +E+ + G+
Sbjct: 27 PVTSVNGSNSNLLGFEALLTNVLGPKASQKGSFKLLKADVSAQTFVKIGFGVEKKLKEGD 86
Query: 322 NATLSTLPDWRTRPSVERVWFEVMARVE 349
P+WRT+P R+ FEV+A+V+
Sbjct: 87 GFNWEGYPEWRTKPESVRMHFEVLAKVD 114
>emb|CAG04335.1| unnamed protein product [Tetraodon nigroviridis]
Length = 569
Score = 39.7 bits (91), Expect = 0.17
Identities = 34/148 (22%), Positives = 63/148 (41%), Gaps = 8/148 (5%)
Query: 29 ASSSSSSTHSNITHIFQDILKAISSRQKWDLNDVRVFNF-DVAKIRFGTSQNYLFRIGSS 87
A+ +S H I QD+L+ S Q+W L D+ + + + L+R+ +
Sbjct: 187 ANKYCTSAHKLIVATAQDVLEVYSDWQRWVLGDLPFSHMVRILDVYLVEGYKVLYRVAIA 246
Query: 88 KNNFTVKFSDEISSWNHNKFTTTPKPDLASLVDQLSSIAFLDYIKLEGPFELRVHESHHL 147
F K + + + T K D+ + V ++S+ D + LE F +R+ +
Sbjct: 247 LLKFYRKHKAGLQGSQQQQDSATVKADIRAFVQDIASVITPDKL-LEKAFSIRLFSRKEI 305
Query: 148 SLSLPMNVSYNGLKHIIVGKGITVEVRR 175
+L N + + KGITV+ +R
Sbjct: 306 TLLQLTN------ERSLQQKGITVKQKR 327
>ref|YP_173834.1| succinate-semialdehyde dehydrogenase [Bacillus clausii KSM-K16]
gi|56908346|dbj|BAD62873.1| succinate-semialdehyde
dehydrogenase [Bacillus clausii KSM-K16]
Length = 472
Score = 37.4 bits (85), Expect = 0.82
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 322 NATLSTLPDWRTRPSVER-----VWFEVMARVEDSRLKPLSIKKVKPFIES-DSVSWAN 374
+A + LP+WR + + ER W+E++ R E+ K +++++ KPF E+ V +AN
Sbjct: 45 DAAAAALPEWRAKTAAERGAYLQKWYELIQREEEEIAKLMTLEQGKPFAEALGEVRYAN 103
>ref|NP_346554.1| choline binding protein PcpA [Streptococcus pneumoniae TIGR4]
gi|14973649|gb|AAK76194.1| choline binding protein PcpA
[Streptococcus pneumoniae TIGR4] gi|25389600|pir||A95250
choline binding protein PcpA [imported] - Streptococcus
pneumoniae (strain TIGR4)
Length = 621
Score = 37.0 bits (84), Expect = 1.1
Identities = 56/229 (24%), Positives = 97/229 (41%), Gaps = 23/229 (10%)
Query: 6 SLRLHQLPFFIIFFLQLFT--AFSNASSSSSST-HSNITHIFQDILKAISSRQKWDLNDV 62
S +L +L F L+L + AF+N S+ T ++ + ++ + +S + D+ +
Sbjct: 186 SQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLFRLTTSLKHVDVEEG 245
Query: 63 RVFNFDVAKIRFGTSQNYLFRIGSSKNNF---TVKFSDEISSWNHNKFTTTPKPDLASLV 119
V + F + L S KN+ T K + E++S++ NK + K +L +
Sbjct: 246 NESFASVDGVLFSKDKTQLIYYPSQKNDESYKTPKETKELASYSFNKNSYLKKLELNEGL 305
Query: 120 DQLSSIAFLDYIKLEG---PFELRVHES-------HHLSLSLPMNVSYNGLKHIIVG--- 166
+++ + AF D IKLE P L E L LP NV G KH++ G
Sbjct: 306 EKIGTFAFADAIKLEEISLPNSLETIERLAFYGNLELKELILPDNVKNFG-KHVMNGLPK 364
Query: 167 -KGITVEVRRAREISFYYQSDLDLQRNGSVICSNQKNEFWPFLQSMCVP 214
K +T+ SF+ LD + + N+ EF + +P
Sbjct: 365 LKSLTIGNNINSLPSFFLSGVLDSLK--EIHIKNKSTEFSVKKDTFAIP 411
>ref|ZP_00323712.1| hypothetical protein PpenA01000321 [Pediococcus pentosaceus ATCC
25745]
Length = 530
Score = 37.0 bits (84), Expect = 1.1
Identities = 30/94 (31%), Positives = 47/94 (49%), Gaps = 14/94 (14%)
Query: 18 FFLQLFTAFSNASSSSSSTHSN-ITHIFQDILKAISSRQKWDLNDVRVFNFDVAKIRFGT 76
+F+QL+ FSN+ +S +S IT+IF IL S K+++ V F F + G
Sbjct: 10 YFIQLY-GFSNSGRMVTSVYSPLITYIFGGILLICGSFYKFEI--VTRFLFFILS---GL 63
Query: 77 SQNYLFRIGSSKNNFTVK-------FSDEISSWN 103
S NY ++G KN F ++ FS + W+
Sbjct: 64 SMNYALKMGKVKNQFMIQLVCIMYAFSPAVIRWD 97
>ref|NP_359536.1| Choline-binding protein [Streptococcus pneumoniae R6]
gi|15459643|gb|AAL00747.1| Choline-binding protein
[Streptococcus pneumoniae R6] gi|25509365|pir||F98114
choline-binding protein [imported] - Streptococcus
pneumoniae (strain R6)
Length = 690
Score = 37.0 bits (84), Expect = 1.1
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 6 SLRLHQLPFFIIFFLQLFT--AFSNASSSSSST-HSNITHIFQDILKAISSRQKWDLNDV 62
S +L +L F L+L + AF+N S+ T ++ + ++ + +S + D+ +
Sbjct: 196 SQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLFRLTTSLKHVDVEEG 255
Query: 63 RVFNFDVAKIRFGTSQNYLFRIGSSKNNF---TVKFSDEISSWNHNKFTTTPKPDLASLV 119
V + F + L S KN+ T K + E++S++ NK + K +L +
Sbjct: 256 NESFASVDGVLFSKDKTQLIYYPSQKNDESYKTPKETKELASYSFNKNSYLKKLELNEGL 315
Query: 120 DQLSSIAFLDYIKLEG---PFELRVHES-------HHLSLSLPMNVSYNGLKHIIVG--K 167
+++ + AF D IKLE P L E L LP NV G KH++ G K
Sbjct: 316 EKIGTFAFADAIKLEEISLPNSLETIERLAFYGNLELKELILPDNVKNFG-KHVMNGLPK 374
Query: 168 GITVEVRRAREI-SFYYQSDLDLQRNGSVICSNQKNEFWPFLQSMCVP 214
+T+ + SF+ LD + + N+ EF + +P
Sbjct: 375 FLTLSGNNINSLPSFFLSGVLDSLK--EIHIKNKSTEFSVKKDTFAIP 420
>ref|YP_179599.1| capsular polysaccharide ABC transporter, periplasmic
polysaccharide-binding protein [Campylobacter jejuni
RM1221] gi|57167272|gb|AAW36051.1| capsular
polysaccharide ABC transporter, periplasmic
polysaccharide-binding protein [Campylobacter jejuni
RM1221]
Length = 552
Score = 35.4 bits (80), Expect = 3.1
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 72 IRFGTSQNYLFRIGSSKNNFTVKFSDEISSWNHNKFTTTPKPDLAS-LVDQLSSIAFLD- 129
I G QNY F G + F + S++I + + KP + + +V LD
Sbjct: 235 ILVGNVQNYAFVDGDVQRPFRFELSNDIKTLADLARVSGAKPIVTNAIVKSYGEDHKLDV 294
Query: 130 --YIKLEGPF-------ELRVHESH-HLSLSLPMNVSYNGLKHIIVGKGITVE 172
Y K++ P E+ H + ++++ +N +NGLK ++VGKG T+E
Sbjct: 295 SAYNKMQFPKVLLRTGDEVEFHPEYVSKNITISVNGEHNGLKTLVVGKGTTLE 347
>ref|NP_001009628.1| hypothetical protein LOC288001 [Rattus norvegicus]
gi|60392583|sp|P08932|KNT2_RAT T-kininogen II precursor
(Major acute phase protein) (Alpha-1-MAP) (Thiostatin)
[Contains: T-kinin] gi|56789155|gb|AAH88161.1| Similar
to alpha-1 major acute phase protein prepeptide [Rattus
norvegicus]
Length = 430
Score = 35.0 bits (79), Expect = 4.1
Identities = 36/126 (28%), Positives = 56/126 (43%), Gaps = 10/126 (7%)
Query: 194 SVICSNQKNEFWPFLQSMCVPLIPIRIIGSASLIAYVARN----PYVQIGTALISEDAVE 249
S++ +N E +PFL+ CVPL P G YV + + Q +D
Sbjct: 199 SIVQTNCSKEDFPFLREDCVPL-PYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFS 257
Query: 250 LLPEKCYHGCVFRKQACPVASLNLRLILLEKILRSLLGHK-ILQDRLSGLIKANIKAYAG 308
LLP+KC+ GC + PV S L+ L I + H + ++ + KA + AG
Sbjct: 258 LLPKKCF-GC---PKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAG 313
Query: 309 VKFPLE 314
K+ +E
Sbjct: 314 TKYVIE 319
>gb|AAB61052.1| Hypothetical protein F2P16.15 [Arabidopsis thaliana]
gi|7485244|pir||T01776 hypothetical protein
A_IG002P16.15 - Arabidopsis thaliana
Length = 559
Score = 35.0 bits (79), Expect = 4.1
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 16 IIFFLQLFTAFSNASSSSSSTHSNITHIFQDILKAISSRQKWDLNDVRVFNFDVAKIRFG 75
+ FL + F++ S + + + FQD L I + Q+ + K F
Sbjct: 286 LTIFLLVLIGFAHVSGILKEIVAVLINCFQDFLPLIHASQR------------INKESFD 333
Query: 76 TSQNYLFRIGSSKNNFTVKFSDEISSWNHNKFTTTPKPDLASLVDQLSSIAFLDYIKLEG 135
++ L IG + +KFS + H K+ +P+ + ++D+ IA + KL G
Sbjct: 334 CIRHILRSIG-----YAIKFSIRRHTQRHTKWLPSPEENTLMILDR--DIASMLSKKLLG 386
Query: 136 PFELRVHESHHLSLSLPMNVSYNGLKHIIVGKGITVEV 173
F L +H + S+ + +++N L ++ G+ E+
Sbjct: 387 SFPL----NHENNFSVEV-MNHNSLLFLLFNNGVLTEI 419
>dbj|BAB80714.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|18309990|ref|NP_561924.1| hypothetical protein
CPE1008 [Clostridium perfringens str. 13]
Length = 287
Score = 35.0 bits (79), Expect = 4.1
Identities = 19/78 (24%), Positives = 36/78 (45%), Gaps = 1/78 (1%)
Query: 93 VKFSDEISSWNHNKFTTTPKPDLASLVDQLSSIAFLDYIKLEGPFELRVHE-SHHLSLSL 151
+K + + WNH + D+ ++++ +I LD E E + +++ L
Sbjct: 61 IKGYETLIRWNHETLGSISASDIVKTLEEIDAIKDLDLYVFESTCEFQSRLIQNNIELQC 120
Query: 152 PMNVSYNGLKHIIVGKGI 169
+N+S N LKH VG +
Sbjct: 121 SVNISINTLKHRGVGSNL 138
>gb|AAA41570.1| alpha-1 major acute phase protein prepeptide
Length = 426
Score = 35.0 bits (79), Expect = 4.1
Identities = 36/126 (28%), Positives = 56/126 (43%), Gaps = 10/126 (7%)
Query: 194 SVICSNQKNEFWPFLQSMCVPLIPIRIIGSASLIAYVARN----PYVQIGTALISEDAVE 249
S++ +N E +PFL+ CVPL P G YV + + Q +D
Sbjct: 195 SIVQTNCSKEDFPFLREDCVPL-PYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFS 253
Query: 250 LLPEKCYHGCVFRKQACPVASLNLRLILLEKILRSLLGHK-ILQDRLSGLIKANIKAYAG 308
LLP+KC+ GC + PV S L+ L I + H + ++ + KA + AG
Sbjct: 254 LLPKKCF-GC---PKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAG 309
Query: 309 VKFPLE 314
K+ +E
Sbjct: 310 TKYVIE 315
>ref|XP_549828.1| putative protein kinase [Oryza sativa (japonica cultivar-group)]
gi|52075662|dbj|BAD44832.1| putative protein kinase
[Oryza sativa (japonica cultivar-group)]
Length = 555
Score = 33.9 bits (76), Expect = 9.1
Identities = 33/119 (27%), Positives = 47/119 (38%), Gaps = 22/119 (18%)
Query: 14 FFIIFFLQL---FTAFSNASSSSSSTHSNITHIFQDILKAISSRQKWDLNDVRVFN---- 66
FF FF L TA ++ S+SS IT I + WD ++ N
Sbjct: 9 FFFFFFFILPASLTATASTSTSSCPDGWQITPALDKCFIYIPTPLSWDRSEALCRNNFTA 68
Query: 67 ----------FDVAKIRFGTSQNYLFRIGSSKNN----FTVKFSDEISSWNHNKFTTTP 111
++AK G S + + +G +NN F K+SD+ SSWN F P
Sbjct: 69 HLAALSSLQDLNLAKSLCGPSPSGCW-VGGHRNNTASAFAWKWSDDSSSWNDTAFPADP 126
>ref|XP_549827.1| putative protein kinase [Oryza sativa (japonica cultivar-group)]
gi|52075663|dbj|BAD44833.1| putative protein kinase
[Oryza sativa (japonica cultivar-group)]
Length = 554
Score = 33.9 bits (76), Expect = 9.1
Identities = 33/119 (27%), Positives = 47/119 (38%), Gaps = 22/119 (18%)
Query: 14 FFIIFFLQL---FTAFSNASSSSSSTHSNITHIFQDILKAISSRQKWDLNDVRVFN---- 66
FF FF L TA ++ S+SS IT I + WD ++ N
Sbjct: 9 FFFFFFFILPASLTATASTSTSSCPDGWQITPALDKCFIYIPTPLSWDRSEALCRNNFTA 68
Query: 67 ----------FDVAKIRFGTSQNYLFRIGSSKNN----FTVKFSDEISSWNHNKFTTTP 111
++AK G S + + +G +NN F K+SD+ SSWN F P
Sbjct: 69 HLAALSSLQDLNLAKSLCGPSPSGCW-VGGHRNNTASAFAWKWSDDSSSWNDTAFPADP 126
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 643,971,760
Number of Sequences: 2540612
Number of extensions: 25833407
Number of successful extensions: 57268
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 57235
Number of HSP's gapped (non-prelim): 24
length of query: 400
length of database: 863,360,394
effective HSP length: 130
effective length of query: 270
effective length of database: 533,080,834
effective search space: 143931825180
effective search space used: 143931825180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)
Medicago: description of AC148404.10