BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148360.15 - phase: 0
(422 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178053.3| DNA-binding protein, putative [Arabidopsis thal... 532 e-150
gb|AAC17076.1| Similar to D. melanogaster sno gene gb|U95760. E... 532 e-150
ref|XP_480755.1| putative sno protein [Oryza sativa (japonica cu... 480 e-134
ref|XP_395494.2| PREDICTED: similar to ENSANGP00000026085 [Apis ... 331 3e-89
ref|XP_309441.2| ENSANGP00000010592 [Anopheles gambiae str. PEST... 326 7e-88
ref|XP_564303.1| ENSANGP00000026085 [Anopheles gambiae str. PEST... 326 7e-88
emb|CAH65413.1| hypothetical protein [Gallus gallus] 325 2e-87
ref|XP_425268.1| PREDICTED: similar to sno, strawberry notch hom... 325 2e-87
ref|XP_355637.3| PREDICTED: sno, strawberry notch homolog 1 [Mus... 322 2e-86
dbj|BAC36636.1| unnamed protein product [Mus musculus] 322 2e-86
ref|XP_222152.3| PREDICTED: similar to strawberry notch homolog ... 321 2e-86
ref|NP_511144.2| CG1903-PB, isoform B [Drosophila melanogaster] ... 321 2e-86
gb|AAB54001.1| Sno [Drosophila melanogaster] gi|7512031|pir||T13... 321 2e-86
dbj|BAA91842.1| unnamed protein product [Homo sapiens] 321 3e-86
ref|NP_060653.2| sno, strawberry notch homolog 1 [Homo sapiens] ... 321 3e-86
dbj|BAD38625.1| strawberry notch homolog 1 [Mus musculus] 320 7e-86
gb|AAD34660.1| Notch signaling pathway homolog protein 1 [Caenor... 312 1e-83
pir||D88486 protein F20H11.2 [imported] - Caenorhabditis elegans 312 1e-83
emb|CAE69179.1| Hypothetical protein CBG15212 [Caenorhabditis br... 311 2e-83
ref|XP_534649.1| PREDICTED: similar to sno, strawberry notch hom... 306 6e-82
>ref|NP_178053.3| DNA-binding protein, putative [Arabidopsis thaliana]
Length = 1299
Score = 532 bits (1371), Expect = e-150
Identities = 267/473 (56%), Positives = 328/473 (68%), Gaps = 71/473 (15%)
Query: 1 MNRQP-QPPPPSTAR--------------ARCAGCRTYFSAAQGVAELPCPNCQMPHVF- 44
M + P QPPPP A+ RCAGCR GV E CP CQ+P +
Sbjct: 1 MTQSPVQPPPPLPAQPHSAAGGVIRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQMLP 60
Query: 45 ----------------------------------------------FVDSSAVKIRCSSC 58
+D + +++ C++C
Sbjct: 61 PELLSRARPQFPQSPQQPPQPIQTLPPPIQQQLKPLNLPRPPVPAHGIDPTKMQLPCANC 120
Query: 59 KAVVNAPSNLSKFPCPQCHVRIDVHADVEEVNEKIDSEPVISCFHKFSQTVSQELDMLQN 118
+A++N P L++F CPQCHV + V DV ++N + + S H T +
Sbjct: 121 QAILNVPHGLTRFSCPQCHVELAV--DVSKLNRSLTA----SQSHSNPPTPAAPTVPPPP 174
Query: 119 PRETVGKQSVLVNEVEQEEGDGGIAGETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPE 178
P E V ++++ EVE+EE +GG AGETF DYRP KLSIG PHPDPIVETSSLSAVQPPE
Sbjct: 175 PPEEVNEEAI---EVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPE 231
Query: 179 PTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAG 238
PTYD KIK +LERSKALSCLQIETLVYACQRHLQH+ G RAGFF+GDGAGVGKGRT+AG
Sbjct: 232 PTYDLKIKEELERSKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAG 291
Query: 239 LIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDTKSVGVRE 298
LIWENW HGRRK LWIS+GSDLK+DARRDLDD+GA+C+ V+ LNKLPY+KLD+K+VG++E
Sbjct: 292 LIWENWKHGRRKALWISIGSDLKYDARRDLDDVGATCVGVNPLNKLPYSKLDSKNVGIKE 351
Query: 299 GVIFSTYSSLIASSDRGRTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQ 358
GV+F TY+SLIASS++GR+R+QQLVQWCGP+FDGL+IFDECHKAKNLVPE +PT+ GQ
Sbjct: 352 GVVFLTYNSLIASSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQ 411
Query: 359 AVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
AV+DIQ ++P+ARV+YCSATGASEPRNM YMVRLGLWGAGT F DF +FLG++
Sbjct: 412 AVVDIQDKIPQARVIYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGAL 464
>gb|AAC17076.1| Similar to D. melanogaster sno gene gb|U95760. EST gb|N97148 and
gb|Z26221 come from this gene. [Arabidopsis thaliana]
gi|7487906|pir||T01020 hypothetical protein YUP8H12R.3 -
Arabidopsis thaliana
Length = 1257
Score = 532 bits (1371), Expect = e-150
Identities = 267/473 (56%), Positives = 328/473 (68%), Gaps = 71/473 (15%)
Query: 1 MNRQP-QPPPPSTAR--------------ARCAGCRTYFSAAQGVAELPCPNCQMPHVF- 44
M + P QPPPP A+ RCAGCR GV E CP CQ+P +
Sbjct: 1 MTQSPVQPPPPLPAQPHSAAGGVIRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQMLP 60
Query: 45 ----------------------------------------------FVDSSAVKIRCSSC 58
+D + +++ C++C
Sbjct: 61 PELLSRARPQFPQSPQQPPQPIQTLPPPIQQQLKPLNLPRPPVPAHGIDPTKMQLPCANC 120
Query: 59 KAVVNAPSNLSKFPCPQCHVRIDVHADVEEVNEKIDSEPVISCFHKFSQTVSQELDMLQN 118
+A++N P L++F CPQCHV + V DV ++N + + S H T +
Sbjct: 121 QAILNVPHGLTRFSCPQCHVELAV--DVSKLNRSLTA----SQSHSNPPTPAAPTVPPPP 174
Query: 119 PRETVGKQSVLVNEVEQEEGDGGIAGETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPE 178
P E V ++++ EVE+EE +GG AGETF DYRP KLSIG PHPDPIVETSSLSAVQPPE
Sbjct: 175 PPEEVNEEAI---EVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPE 231
Query: 179 PTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAG 238
PTYD KIK +LERSKALSCLQIETLVYACQRHLQH+ G RAGFF+GDGAGVGKGRT+AG
Sbjct: 232 PTYDLKIKEELERSKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAG 291
Query: 239 LIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDTKSVGVRE 298
LIWENW HGRRK LWIS+GSDLK+DARRDLDD+GA+C+ V+ LNKLPY+KLD+K+VG++E
Sbjct: 292 LIWENWKHGRRKALWISIGSDLKYDARRDLDDVGATCVGVNPLNKLPYSKLDSKNVGIKE 351
Query: 299 GVIFSTYSSLIASSDRGRTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQ 358
GV+F TY+SLIASS++GR+R+QQLVQWCGP+FDGL+IFDECHKAKNLVPE +PT+ GQ
Sbjct: 352 GVVFLTYNSLIASSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQ 411
Query: 359 AVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
AV+DIQ ++P+ARV+YCSATGASEPRNM YMVRLGLWGAGT F DF +FLG++
Sbjct: 412 AVVDIQDKIPQARVIYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGAL 464
>ref|XP_480755.1| putative sno protein [Oryza sativa (japonica cultivar-group)]
gi|38636663|dbj|BAD02983.1| putative sno protein [Oryza
sativa (japonica cultivar-group)]
Length = 1398
Score = 480 bits (1236), Expect = e-134
Identities = 245/478 (51%), Positives = 311/478 (64%), Gaps = 73/478 (15%)
Query: 5 PQPPPPSTA--RARCAGCRTYFSAAQGVAELPCPNCQM---------------------- 40
P P S A + RCAGCR + A G+ E CP C+M
Sbjct: 11 PSPVAASAAPVQVRCAGCRGVLAVAPGMTEFICPKCRMAQRLPPELMPPSPPKASPTPPP 70
Query: 41 -------------------------PHVFFVDSSAVKIRCSSCKAVVNAPSNLSKFPCPQ 75
P VD + +++ C+ CKA++N P L++F CPQ
Sbjct: 71 QPQPHPQLQPPPPPAPLPPPSRRSAPRAQGVDPTKIQLPCARCKAILNVPHGLARFRCPQ 130
Query: 76 CHVRIDVHADVEEVNEKIDSE------------------PVISCFH----KFSQTVSQEL 113
C V D+ D+ ++ + + P I H V +
Sbjct: 131 CDV--DLAVDLSKLRNFLATAGPGFAPPLPLPPPPPPPMPPIPLPHMPFLPMMPHVPVPM 188
Query: 114 DMLQNPRETVGKQSVLVNEVEQEEGDGGIAGETFTDYRPSKLSIGSPHPDPIVETSSLSA 173
+ +P E + + + +VE+EE +GG GETF DYRP KLS+G PHPDP+VETSSLSA
Sbjct: 189 PPMASPAELPEEINEVAVDVEREEDEGGTVGETFMDYRPPKLSLGLPHPDPVVETSSLSA 248
Query: 174 VQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKG 233
VQPPEPTYD I ++L+ +K LSCLQIET+VYA QRHL H+P+G RAGFFIGDGAGVGKG
Sbjct: 249 VQPPEPTYDLTIMDELDETKVLSCLQIETIVYASQRHLYHLPTGARAGFFIGDGAGVGKG 308
Query: 234 RTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDTKS 293
RT+AGLIWENW GR K LWIS+GSDLK+DARRDLDD+GA + VHALNKLPY+K+D+K+
Sbjct: 309 RTIAGLIWENWKQGRHKALWISIGSDLKYDARRDLDDVGAKYVEVHALNKLPYSKIDSKA 368
Query: 294 VGVREGVIFSTYSSLIASSDRGRTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKP 353
VG+ GVIF TYSSLIASS++GR+R+QQL++WCG +FDGL++FDECHKAKNL+PE +P
Sbjct: 369 VGITTGVIFVTYSSLIASSEKGRSRLQQLIEWCGSEFDGLLVFDECHKAKNLIPEAGSQP 428
Query: 354 TKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
T+TG+AVL+IQ LPEARVVYCSATGASEPRN+ YMVRLGLWG GT F +F +FLG++
Sbjct: 429 TRTGKAVLEIQEMLPEARVVYCSATGASEPRNLGYMVRLGLWGDGTSFQNFQKFLGAL 486
>ref|XP_395494.2| PREDICTED: similar to ENSANGP00000026085 [Apis mellifera]
Length = 1288
Score = 331 bits (848), Expect = 3e-89
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 9/291 (3%)
Query: 126 QSVLVNEVEQEEGDGGIAGETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPEPTYDPKI 185
Q + E E ++ D G+A ET++DY P+KL +G HPDP+VET+SLS+V+P + Y I
Sbjct: 207 QPTIPEEEEVDDEDMGVA-ETYSDYMPTKLKLGRKHPDPVVETASLSSVEPTDVWYKLSI 265
Query: 186 KNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAGLIWENWH 245
+ R+ ALS LQ+E++ YA Q+H +P RAGF IGDGAGVGKGRT+AG+I+EN+
Sbjct: 266 PEETIRTGALSALQLESITYASQQHEHLLPDSTRAGFLIGDGAGVGKGRTIAGIIFENYL 325
Query: 246 HGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDTKSVG-VREGVIFST 304
GR++ +W+SV +DLK+DA RDL+D+GAS I VHALNK Y K+ + G V++GVIFST
Sbjct: 326 KGRKRAIWVSVSNDLKYDAERDLNDIGASKIEVHALNKFKYAKISSAVNGNVKKGVIFST 385
Query: 305 YSSLIASSDRG----RTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQAV 360
YS+LI S + ++R++QL+QWCG FDGLIIFDECH+AKNL P KPTKT V
Sbjct: 386 YSALIGESSQSGGKYKSRLKQLLQWCGEDFDGLIIFDECHRAKNLCPTGSSKPTKT---V 442
Query: 361 LDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
L++Q +LP+ARVVY SATGASEPRNMAYMVRLG+WG GT FP+F +F+ +V
Sbjct: 443 LELQNKLPKARVVYASATGASEPRNMAYMVRLGMWGEGTPFPEFNDFITAV 493
>ref|XP_309441.2| ENSANGP00000010592 [Anopheles gambiae str. PEST]
gi|55244773|gb|EAA05169.2| ENSANGP00000010592 [Anopheles
gambiae str. PEST]
Length = 1216
Score = 326 bits (836), Expect = 7e-88
Identities = 162/285 (56%), Positives = 211/285 (73%), Gaps = 6/285 (2%)
Query: 132 EVEQEEGDGGIAGETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPEPTYDPKIKNDLER 191
E E E+ + G+A ET+ +Y P+KL IG HPDP+VET+SLS+V+P + Y I +
Sbjct: 2 EEEAEDEEMGVA-ETYAEYWPAKLKIGKKHPDPVVETASLSSVEPSDVYYQLSIPPETIN 60
Query: 192 SKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAGLIWENWHHGRRKT 251
LS LQ+E++ YA Q H +P G RAGF IGDGAGVGKGRT+AG+I+EN+ GR+K+
Sbjct: 61 GGLLSALQLESITYASQAHAHLLPDGTRAGFLIGDGAGVGKGRTIAGIIYENYLKGRKKS 120
Query: 252 LWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLD-TKSVGVREGVIFSTYSSLIA 310
+WISV +DL++DA RDL D+GA I V ALNKL Y K++ T + V++GVIF TYS+LI
Sbjct: 121 IWISVSNDLRYDAERDLRDIGAGKIEVLALNKLKYAKINSTVNHNVKKGVIFGTYSALIG 180
Query: 311 SSD----RGRTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQAVLDIQAQ 366
S + ++R++QL+QWCGP FDG+I+FDECHKAKNL P KPTKTG L++Q +
Sbjct: 181 ESQSTAGKYKSRLKQLLQWCGPDFDGVIVFDECHKAKNLCPVGSSKPTKTGLTALELQNK 240
Query: 367 LPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
LP+ARVVY SATGASEPRNMAYMVRLG+WG GT FP F +F+ +V
Sbjct: 241 LPKARVVYASATGASEPRNMAYMVRLGIWGQGTPFPSFNDFIQAV 285
>ref|XP_564303.1| ENSANGP00000026085 [Anopheles gambiae str. PEST]
gi|55244772|gb|EAL41573.1| ENSANGP00000026085 [Anopheles
gambiae str. PEST]
Length = 1054
Score = 326 bits (836), Expect = 7e-88
Identities = 162/285 (56%), Positives = 211/285 (73%), Gaps = 6/285 (2%)
Query: 132 EVEQEEGDGGIAGETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPEPTYDPKIKNDLER 191
E E E+ + G+A ET+ +Y P+KL IG HPDP+VET+SLS+V+P + Y I +
Sbjct: 10 EEEAEDEEMGVA-ETYAEYWPAKLKIGKKHPDPVVETASLSSVEPSDVYYQLSIPPETIN 68
Query: 192 SKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAGLIWENWHHGRRKT 251
LS LQ+E++ YA Q H +P G RAGF IGDGAGVGKGRT+AG+I+EN+ GR+K+
Sbjct: 69 GGLLSALQLESITYASQAHAHLLPDGTRAGFLIGDGAGVGKGRTIAGIIYENYLKGRKKS 128
Query: 252 LWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLD-TKSVGVREGVIFSTYSSLIA 310
+WISV +DL++DA RDL D+GA I V ALNKL Y K++ T + V++GVIF TYS+LI
Sbjct: 129 IWISVSNDLRYDAERDLRDIGAGKIEVLALNKLKYAKINSTVNHNVKKGVIFGTYSALIG 188
Query: 311 SSD----RGRTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQAVLDIQAQ 366
S + ++R++QL+QWCGP FDG+I+FDECHKAKNL P KPTKTG L++Q +
Sbjct: 189 ESQSTAGKYKSRLKQLLQWCGPDFDGVIVFDECHKAKNLCPVGSSKPTKTGLTALELQNK 248
Query: 367 LPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
LP+ARVVY SATGASEPRNMAYMVRLG+WG GT FP F +F+ +V
Sbjct: 249 LPKARVVYASATGASEPRNMAYMVRLGIWGQGTPFPSFNDFIQAV 293
>emb|CAH65413.1| hypothetical protein [Gallus gallus]
Length = 1239
Score = 325 bits (833), Expect = 2e-87
Identities = 166/293 (56%), Positives = 210/293 (71%), Gaps = 6/293 (2%)
Query: 125 KQSVLVNEVEQEEGDGGIAG--ETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPEPTYD 182
K + E E EE D G ET+ +Y P KL IG HPDP+VETSSLS+V PP+ Y
Sbjct: 215 KVPAVKEEEEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQ 274
Query: 183 PKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAGLIWE 242
I + + LS LQ+E + YA Q+H +P+G RAGF IGDGAGVGKGRT+AG+I+E
Sbjct: 275 TSISEETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYE 334
Query: 243 NWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDTKSVG-VREGVI 301
N+ GR++ +W SV +DLK+DA RDL D+GA I VH+LNK Y K+ +K G V++GVI
Sbjct: 335 NYLLGRKRAVWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVI 394
Query: 302 FSTYSSLIASSDRG---RTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQ 358
F+TYSSLI S G +TR++QL+ WCG FDG+I+FDECHKAKNL P KPTKTG
Sbjct: 395 FATYSSLIGESQSGGKYKTRLKQLLHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGL 454
Query: 359 AVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
AVL++Q +LP+ARVVY SATGASEPRNMAYM RLG+WG GT F +F +F+ +V
Sbjct: 455 AVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAV 507
>ref|XP_425268.1| PREDICTED: similar to sno, strawberry notch homolog 1; MOP-3
[Gallus gallus]
Length = 1634
Score = 325 bits (833), Expect = 2e-87
Identities = 166/293 (56%), Positives = 210/293 (71%), Gaps = 6/293 (2%)
Query: 125 KQSVLVNEVEQEEGDGGIAG--ETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPEPTYD 182
K + E E EE D G ET+ +Y P KL IG HPDP+VETSSLS+V PP+ Y
Sbjct: 460 KVPAVKEEEEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQ 519
Query: 183 PKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAGLIWE 242
I + + LS LQ+E + YA Q+H +P+G RAGF IGDGAGVGKGRT+AG+I+E
Sbjct: 520 TSISEETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYE 579
Query: 243 NWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDTKSVG-VREGVI 301
N+ GR++ +W SV +DLK+DA RDL D+GA I VH+LNK Y K+ +K G V++GVI
Sbjct: 580 NYLLGRKRAVWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVI 639
Query: 302 FSTYSSLIASSDRG---RTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQ 358
F+TYSSLI S G +TR++QL+ WCG FDG+I+FDECHKAKNL P KPTKTG
Sbjct: 640 FATYSSLIGESQSGGKYKTRLKQLLHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGL 699
Query: 359 AVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
AVL++Q +LP+ARVVY SATGASEPRNMAYM RLG+WG GT F +F +F+ +V
Sbjct: 700 AVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAV 752
>ref|XP_355637.3| PREDICTED: sno, strawberry notch homolog 1 [Mus musculus]
Length = 1391
Score = 322 bits (824), Expect = 2e-86
Identities = 168/304 (55%), Positives = 211/304 (69%), Gaps = 6/304 (1%)
Query: 114 DMLQNPRETVGKQSVLVNEVEQEEGDGGIAG--ETFTDYRPSKLSIGSPHPDPIVETSSL 171
DM K V+ E E EE D G ET+ +Y P KL IG HPD +VETSSL
Sbjct: 206 DMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSL 265
Query: 172 SAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVG 231
S+V PP+ Y I + + LS LQ+E + YA Q+H +P+G RAGF IGDGAGVG
Sbjct: 266 SSVTPPDVWYKTSISEETIDNGWLSALQLEAVTYAAQQHETFLPNGDRAGFLIGDGAGVG 325
Query: 232 KGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDT 291
KGRT+AG+I+EN+ R++ LW SV +DLK+DA RDL D+GA I VH+LNK Y K+ +
Sbjct: 326 KGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISS 385
Query: 292 KSVG-VREGVIFSTYSSLIASSDRG---RTRMQQLVQWCGPKFDGLIIFDECHKAKNLVP 347
K G V++GVIF+TYSSLI S G +TR++QL+ WCG FDG+I+FDECHKAKNL P
Sbjct: 386 KHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCP 445
Query: 348 EKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEF 407
KPTKTG AVL++Q +LP+ARVVY SATGASEPRNMAYM RLG+WG GT F +F +F
Sbjct: 446 VGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDF 505
Query: 408 LGSV 411
+ +V
Sbjct: 506 IQAV 509
>dbj|BAC36636.1| unnamed protein product [Mus musculus]
Length = 785
Score = 322 bits (824), Expect = 2e-86
Identities = 168/304 (55%), Positives = 211/304 (69%), Gaps = 6/304 (1%)
Query: 114 DMLQNPRETVGKQSVLVNEVEQEEGDGGIAG--ETFTDYRPSKLSIGSPHPDPIVETSSL 171
DM K V+ E E EE D G ET+ +Y P KL IG HPD +VETSSL
Sbjct: 206 DMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSL 265
Query: 172 SAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVG 231
S+V PP+ Y I + + LS LQ+E + YA Q+H +P+G RAGF IGDGAGVG
Sbjct: 266 SSVTPPDVWYKTSISEETIDNGWLSALQLEAVTYAAQQHETFLPNGDRAGFLIGDGAGVG 325
Query: 232 KGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDT 291
KGRT+AG+I+EN+ R++ LW SV +DLK+DA RDL D+GA I VH+LNK Y K+ +
Sbjct: 326 KGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISS 385
Query: 292 KSVG-VREGVIFSTYSSLIASSDRG---RTRMQQLVQWCGPKFDGLIIFDECHKAKNLVP 347
K G V++GVIF+TYSSLI S G +TR++QL+ WCG FDG+I+FDECHKAKNL P
Sbjct: 386 KHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCP 445
Query: 348 EKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEF 407
KPTKTG AVL++Q +LP+ARVVY SATGASEPRNMAYM RLG+WG GT F +F +F
Sbjct: 446 VGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDF 505
Query: 408 LGSV 411
+ +V
Sbjct: 506 IQAV 509
>ref|XP_222152.3| PREDICTED: similar to strawberry notch homolog 1 [Rattus
norvegicus]
Length = 1392
Score = 321 bits (823), Expect = 2e-86
Identities = 168/304 (55%), Positives = 211/304 (69%), Gaps = 6/304 (1%)
Query: 114 DMLQNPRETVGKQSVLVNEVEQEEGDGGIAG--ETFTDYRPSKLSIGSPHPDPIVETSSL 171
DM K V+ E E EE D G ET+ +Y P KL IG HPD +VETSSL
Sbjct: 206 DMKMRSFSPTMKVPVVREEDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSL 265
Query: 172 SAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVG 231
S+V PP+ Y I + + LS LQ+E + YA Q+H +P+G RAGF IGDGAGVG
Sbjct: 266 SSVTPPDVWYKTSISEETIDNGWLSALQLEAVTYAAQQHETFLPNGDRAGFLIGDGAGVG 325
Query: 232 KGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDT 291
KGRT+AG+I+EN+ R++ LW SV +DLK+DA RDL D+GA I VH+LNK Y K+ +
Sbjct: 326 KGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISS 385
Query: 292 KSVG-VREGVIFSTYSSLIASSDRG---RTRMQQLVQWCGPKFDGLIIFDECHKAKNLVP 347
K G V++GVIF+TYSSLI S G +TR++QL+ WCG FDG+I+FDECHKAKNL P
Sbjct: 386 KHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCP 445
Query: 348 EKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEF 407
KPTKTG AVL++Q +LP+ARVVY SATGASEPRNMAYM RLG+WG GT F +F +F
Sbjct: 446 VGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDF 505
Query: 408 LGSV 411
+ +V
Sbjct: 506 IQAV 509
>ref|NP_511144.2| CG1903-PB, isoform B [Drosophila melanogaster]
gi|7292847|gb|AAF48240.1| CG1903-PB, isoform B
[Drosophila melanogaster]
Length = 1547
Score = 321 bits (823), Expect = 2e-86
Identities = 165/286 (57%), Positives = 211/286 (73%), Gaps = 8/286 (2%)
Query: 131 NEVEQEEGDGGIAGETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPEPTYDPKIKNDLE 190
+EV+ EE G+A ET+ DY P+KL +G HPD +VET+SLS+V+P + Y + +
Sbjct: 313 DEVDYEEM--GVA-ETYADYWPAKLKLGKKHPDAVVETASLSSVEPCDVYYKLSLPLETI 369
Query: 191 RSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAGLIWENWHHGRRK 250
S LS LQ+E++ YA Q H +P G RAGF IGDGAGVGKGRT+AG+I+EN+ GR+K
Sbjct: 370 NSGHLSALQLESITYASQAHDHLLPDGSRAGFLIGDGAGVGKGRTIAGIIYENYLKGRKK 429
Query: 251 TLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDTK-SVGVREGVIFSTYSSLI 309
LWISV +DLK+DA RDL D+GA+ I VHALNK Y K+ + + + GVIFSTYS+LI
Sbjct: 430 ALWISVSNDLKYDAERDLSDIGATRIEVHALNKFKYAKISSDVNNNCKRGVIFSTYSALI 489
Query: 310 ASSD----RGRTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQAVLDIQA 365
S+ + R+R +QL+QWCG F+GLIIFDECHKAKNL P KPTKTGQ VL++Q
Sbjct: 490 GESNNKTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQ 549
Query: 366 QLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
+LP+ARVVY SATGASEP+NMAYMVRLGLWG GT F +F +F+ +V
Sbjct: 550 KLPKARVVYASATGASEPKNMAYMVRLGLWGQGTAFGNFNDFITAV 595
>gb|AAB54001.1| Sno [Drosophila melanogaster] gi|7512031|pir||T13847 sno protein -
fruit fly (Drosophila melanogaster)
Length = 1547
Score = 321 bits (823), Expect = 2e-86
Identities = 165/286 (57%), Positives = 211/286 (73%), Gaps = 8/286 (2%)
Query: 131 NEVEQEEGDGGIAGETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPEPTYDPKIKNDLE 190
+EV+ EE G+A ET+ DY P+KL +G HPD +VET+SLS+V+P + Y + +
Sbjct: 313 DEVDYEEM--GVA-ETYADYWPAKLKLGKKHPDAVVETASLSSVEPCDVYYKLSLPLETI 369
Query: 191 RSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAGLIWENWHHGRRK 250
S LS LQ+E++ YA Q H +P G RAGF IGDGAGVGKGRT+AG+I+EN+ GR+K
Sbjct: 370 NSGHLSALQLESITYASQAHDHLLPDGSRAGFLIGDGAGVGKGRTIAGIIYENYLKGRKK 429
Query: 251 TLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDTK-SVGVREGVIFSTYSSLI 309
LWISV +DLK+DA RDL D+GA+ I VHALNK Y K+ + + + GVIFSTYS+LI
Sbjct: 430 ALWISVSNDLKYDAERDLSDIGATRIEVHALNKFKYAKISSDVNNNCKRGVIFSTYSALI 489
Query: 310 ASSD----RGRTRMQQLVQWCGPKFDGLIIFDECHKAKNLVPEKDKKPTKTGQAVLDIQA 365
S+ + R+R +QL+QWCG F+GLIIFDECHKAKNL P KPTKTGQ VL++Q
Sbjct: 490 GESNNKTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQ 549
Query: 366 QLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEFLGSV 411
+LP+ARVVY SATGASEP+NMAYMVRLGLWG GT F +F +F+ +V
Sbjct: 550 KLPKARVVYASATGASEPKNMAYMVRLGLWGQGTAFGNFNDFITAV 595
>dbj|BAA91842.1| unnamed protein product [Homo sapiens]
Length = 782
Score = 321 bits (822), Expect = 3e-86
Identities = 167/304 (54%), Positives = 211/304 (68%), Gaps = 6/304 (1%)
Query: 114 DMLQNPRETVGKQSVLVNEVEQEEGDGGIAG--ETFTDYRPSKLSIGSPHPDPIVETSSL 171
DM K V+ + E EE D G ET+ +Y P KL IG HPD +VETSSL
Sbjct: 206 DMKMRSFSPTMKVPVVKEDDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSL 265
Query: 172 SAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVG 231
S+V PP+ Y I + + LS LQ+E + YA Q+H +P+G RAGF IGDGAGVG
Sbjct: 266 SSVTPPDVWYKTSISEETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVG 325
Query: 232 KGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDT 291
KGRT+AG+I+EN+ R++ LW SV +DLK+DA RDL D+GA I VH+LNK Y K+ +
Sbjct: 326 KGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISS 385
Query: 292 KSVG-VREGVIFSTYSSLIASSDRG---RTRMQQLVQWCGPKFDGLIIFDECHKAKNLVP 347
K G V++GVIF+TYSSLI S G +TR++QL+ WCG FDG+I+FDECHKAKNL P
Sbjct: 386 KHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCP 445
Query: 348 EKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEF 407
KPTKTG AVL++Q +LP+ARVVY SATGASEPRNMAYM RLG+WG GT F +F +F
Sbjct: 446 VGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDF 505
Query: 408 LGSV 411
+ +V
Sbjct: 506 IQAV 509
>ref|NP_060653.2| sno, strawberry notch homolog 1 [Homo sapiens]
gi|11990420|dbj|BAB19784.1| MOP-3 [Homo sapiens]
Length = 1392
Score = 321 bits (822), Expect = 3e-86
Identities = 167/304 (54%), Positives = 211/304 (68%), Gaps = 6/304 (1%)
Query: 114 DMLQNPRETVGKQSVLVNEVEQEEGDGGIAG--ETFTDYRPSKLSIGSPHPDPIVETSSL 171
DM K V+ + E EE D G ET+ +Y P KL IG HPD +VETSSL
Sbjct: 206 DMKMRSFSPTMKVPVVKEDDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSL 265
Query: 172 SAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVG 231
S+V PP+ Y I + + LS LQ+E + YA Q+H +P+G RAGF IGDGAGVG
Sbjct: 266 SSVTPPDVWYKTSISEETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVG 325
Query: 232 KGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDT 291
KGRT+AG+I+EN+ R++ LW SV +DLK+DA RDL D+GA I VH+LNK Y K+ +
Sbjct: 326 KGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISS 385
Query: 292 KSVG-VREGVIFSTYSSLIASSDRG---RTRMQQLVQWCGPKFDGLIIFDECHKAKNLVP 347
K G V++GVIF+TYSSLI S G +TR++QL+ WCG FDG+I+FDECHKAKNL P
Sbjct: 386 KHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCP 445
Query: 348 EKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEF 407
KPTKTG AVL++Q +LP+ARVVY SATGASEPRNMAYM RLG+WG GT F +F +F
Sbjct: 446 VGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDF 505
Query: 408 LGSV 411
+ +V
Sbjct: 506 IQAV 509
>dbj|BAD38625.1| strawberry notch homolog 1 [Mus musculus]
Length = 1390
Score = 320 bits (819), Expect = 7e-86
Identities = 167/304 (54%), Positives = 210/304 (68%), Gaps = 6/304 (1%)
Query: 114 DMLQNPRETVGKQSVLVNEVEQEEGDGGIAG--ETFTDYRPSKLSIGSPHPDPIVETSSL 171
DM K V+ E E EE D G ET+ +Y P KL IG HPD +VETSSL
Sbjct: 205 DMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSL 264
Query: 172 SAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVG 231
S+V PP+ Y I + + LS LQ+E + YA Q+H +P+G RAGF IGDGAGVG
Sbjct: 265 SSVTPPDVWYKTSISEETIDNGWLSALQLEAVTYAAQQHETFLPNGDRAGFLIGDGAGVG 324
Query: 232 KGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNKLPYTKLDT 291
KGRT+AG+I+EN+ R++ LW SV +DLK+DA RDL D+GA I VH+LNK Y K+ +
Sbjct: 325 KGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISS 384
Query: 292 KSVG-VREGVIFSTYSSLIASSDRG---RTRMQQLVQWCGPKFDGLIIFDECHKAKNLVP 347
K G V++GVIF+TYSSLI S G +TR++QL+ WCG FDG+I+FDECHKAKNL P
Sbjct: 385 KHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCP 444
Query: 348 EKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGAGTFFPDFGEF 407
KPTKTG AVL++Q +LP+ARVVY SATGASEPRNMAYM RLG+WG G F +F +F
Sbjct: 445 VGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGAPFREFSDF 504
Query: 408 LGSV 411
+ +V
Sbjct: 505 IQAV 508
>gb|AAD34660.1| Notch signaling pathway homolog protein 1 [Caenorhabditis elegans]
gi|17553078|ref|NP_498455.1| notch Signaling pathway
Homolog (nsh-1) [Caenorhabditis elegans]
Length = 1451
Score = 312 bits (799), Expect = 1e-83
Identities = 164/320 (51%), Positives = 219/320 (68%), Gaps = 16/320 (5%)
Query: 107 QTVSQELDMLQNPRET------VGKQSVLV---NEVEQEEGDGGIAGETFTDYRPSKLSI 157
QT Q L Q ++ VG++ L N++E +E + G A ET+++Y P+KL
Sbjct: 173 QTTPQPLTKSQKAKDEMKMAYQVGREEALQQRRNDLEDDEENLGYA-ETYSEYTPAKLRS 231
Query: 158 GSPHPDPIVETSSLSAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSG 217
G HPD +VE++SLS+V PP+ Y I L +S LQ+E ++YACQ H + +PSG
Sbjct: 232 GMAHPDSVVESASLSSVSPPDVKYQISIPEYLIDMGHISALQLEAVIYACQMHERRMPSG 291
Query: 218 PRAGFFIGDGAGVGKGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCIS 277
R G+ IGDGAGVGKGRTVA +I+EN+ GR++ +W+SV SDLKFDA RDL D GA I
Sbjct: 292 ERYGYLIGDGAGVGKGRTVACIIFENYLQGRKRAIWLSVSSDLKFDAERDLRDCGAPNIP 351
Query: 278 VHALNKLPYTKLDTKSVG-VREGVIFSTYSSLI-----ASSDRGRTRMQQLVQWCGPKFD 331
V+ALNK+ Y K+ K G +++GV+F+TY+SLI A S + R+R+ QL+QW G +D
Sbjct: 352 VYALNKMKYAKISGKENGSIKKGVMFATYTSLIGECRGAKSRKYRSRISQLIQWFGQDYD 411
Query: 332 GLIIFDECHKAKNLVPEKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVR 391
G+II DECH+AKNLVP KPTKTG+ VL++Q LP ARVVY SATGA+EPRNMAYM R
Sbjct: 412 GVIILDECHRAKNLVPTAGAKPTKTGRMVLELQKALPNARVVYASATGATEPRNMAYMTR 471
Query: 392 LGLWGAGTFFPDFGEFLGSV 411
LGLWG FP+F +F+ +V
Sbjct: 472 LGLWGERQAFPEFHDFISAV 491
>pir||D88486 protein F20H11.2 [imported] - Caenorhabditis elegans
Length = 1870
Score = 312 bits (799), Expect = 1e-83
Identities = 164/320 (51%), Positives = 219/320 (68%), Gaps = 16/320 (5%)
Query: 107 QTVSQELDMLQNPRET------VGKQSVLV---NEVEQEEGDGGIAGETFTDYRPSKLSI 157
QT Q L Q ++ VG++ L N++E +E + G A ET+++Y P+KL
Sbjct: 592 QTTPQPLTKSQKAKDEMKMAYQVGREEALQQRRNDLEDDEENLGYA-ETYSEYTPAKLRS 650
Query: 158 GSPHPDPIVETSSLSAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSG 217
G HPD +VE++SLS+V PP+ Y I L +S LQ+E ++YACQ H + +PSG
Sbjct: 651 GMAHPDSVVESASLSSVSPPDVKYQISIPEYLIDMGHISALQLEAVIYACQMHERRMPSG 710
Query: 218 PRAGFFIGDGAGVGKGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCIS 277
R G+ IGDGAGVGKGRTVA +I+EN+ GR++ +W+SV SDLKFDA RDL D GA I
Sbjct: 711 ERYGYLIGDGAGVGKGRTVACIIFENYLQGRKRAIWLSVSSDLKFDAERDLRDCGAPNIP 770
Query: 278 VHALNKLPYTKLDTKSVG-VREGVIFSTYSSLI-----ASSDRGRTRMQQLVQWCGPKFD 331
V+ALNK+ Y K+ K G +++GV+F+TY+SLI A S + R+R+ QL+QW G +D
Sbjct: 771 VYALNKMKYAKISGKENGSIKKGVMFATYTSLIGECRGAKSRKYRSRISQLIQWFGQDYD 830
Query: 332 GLIIFDECHKAKNLVPEKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVR 391
G+II DECH+AKNLVP KPTKTG+ VL++Q LP ARVVY SATGA+EPRNMAYM R
Sbjct: 831 GVIILDECHRAKNLVPTAGAKPTKTGRMVLELQKALPNARVVYASATGATEPRNMAYMTR 890
Query: 392 LGLWGAGTFFPDFGEFLGSV 411
LGLWG FP+F +F+ +V
Sbjct: 891 LGLWGERQAFPEFHDFISAV 910
>emb|CAE69179.1| Hypothetical protein CBG15212 [Caenorhabditis briggsae]
Length = 1440
Score = 311 bits (798), Expect = 2e-83
Identities = 163/314 (51%), Positives = 216/314 (67%), Gaps = 10/314 (3%)
Query: 107 QTVSQELDMLQNPRETVGKQSVLV---NEVEQEEGDGGIAGETFTDYRPSKLSIGSPHPD 163
QT SQ+ VG+ L N++E +E + G A ET+++Y P+KL G HPD
Sbjct: 180 QTKSQKAKDEMRMAYQVGRDEALQQRKNDLEDDEENLGYA-ETYSEYTPAKLRSGMAHPD 238
Query: 164 PIVETSSLSAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFF 223
+VE++SLS+V PP+ Y I L +S LQ+E ++YACQ H + +PSG R G+
Sbjct: 239 SVVESASLSSVSPPDVKYQISIPEYLIDMGHISALQLEAVIYACQMHERRMPSGERYGYL 298
Query: 224 IGDGAGVGKGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGASCISVHALNK 283
IGDGAGVGKGRTVA +I+EN+ GR++ +W+SV SDLKFDA RDL D GA I V+ALNK
Sbjct: 299 IGDGAGVGKGRTVACIIFENYLQGRKRAIWLSVSSDLKFDAERDLRDCGAPNIPVYALNK 358
Query: 284 LPYTKLDTKSVG-VREGVIFSTYSSLI-----ASSDRGRTRMQQLVQWCGPKFDGLIIFD 337
+ Y K+ K G +++GV+F+TY+SLI A S + R+R+ QL+QW G +DG+II D
Sbjct: 359 MKYAKISGKENGSIKKGVMFATYTSLIGECRGAKSRKYRSRISQLIQWFGQDYDGVIILD 418
Query: 338 ECHKAKNLVPEKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGA 397
ECH+AKNLVP KPTKTG+ VL++Q LP ARVVY SATGA+EPRNMAYM RLGLWG
Sbjct: 419 ECHRAKNLVPTAGAKPTKTGRMVLELQKALPNARVVYASATGATEPRNMAYMTRLGLWGE 478
Query: 398 GTFFPDFGEFLGSV 411
FP+F +F+ +V
Sbjct: 479 RQAFPEFHDFISAV 492
>ref|XP_534649.1| PREDICTED: similar to sno, strawberry notch homolog 1 [Canis
familiaris]
Length = 1469
Score = 306 bits (785), Expect = 6e-82
Identities = 153/262 (58%), Positives = 194/262 (73%), Gaps = 4/262 (1%)
Query: 154 KLSIGSPHPDPIVETSSLSAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQH 213
K+ IG HPD +VETSSLS+V PP+ Y I + + LS LQ+E + YA Q+H
Sbjct: 349 KVKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITYAAQQHETF 408
Query: 214 VPSGPRAGFFIGDGAGVGKGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMGA 273
+P+G RAGF IGDGAGVGKGRT+AG+I+EN+ R++ LW SV +DLK+DA RDL D+GA
Sbjct: 409 LPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGA 468
Query: 274 SCISVHALNKLPYTKLDTKSVG-VREGVIFSTYSSLIASSDRG---RTRMQQLVQWCGPK 329
I VH+LNK Y K+ +K G V++GVIF+TYSSLI S G +TR++QL+ WCG
Sbjct: 469 KNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDD 528
Query: 330 FDGLIIFDECHKAKNLVPEKDKKPTKTGQAVLDIQAQLPEARVVYCSATGASEPRNMAYM 389
FDG+I+FDECHKAKNL P KPTKTG AVL++Q +LP+ARVVY SATGASEPRNMAYM
Sbjct: 529 FDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYM 588
Query: 390 VRLGLWGAGTFFPDFGEFLGSV 411
RLG+WG GT F +F +F+ +V
Sbjct: 589 NRLGIWGEGTPFREFSDFIQAV 610
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 771,829,118
Number of Sequences: 2540612
Number of extensions: 34462198
Number of successful extensions: 110098
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 109765
Number of HSP's gapped (non-prelim): 201
length of query: 422
length of database: 863,360,394
effective HSP length: 131
effective length of query: 291
effective length of database: 530,540,222
effective search space: 154387204602
effective search space used: 154387204602
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)
Medicago: description of AC148360.15