BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148360.12 + phase: 0 /pseudo
         (102 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAD52985.1| unknown protein [Oryza sativa (japonica cultivar...    48  7e-05
emb|CAB87696.1| putative protein [Arabidopsis thaliana] gi|15239...    47  2e-04
dbj|BAD94549.1| putative protein [Arabidopsis thaliana]                47  2e-04
ref|NP_344144.1| Formate dehydrogenase Alpha subunit (fdhF-2) [S...    32  3.8
ref|NP_828814.1| putative IS116/IS110/IS902-family transposase [...    32  5.0
ref|ZP_00386714.1| COG1574: Predicted metal-dependent hydrolase ...    31  6.5
ref|XP_656334.1| hypothetical protein 14.t00038 [Entamoeba histo...    31  6.5
ref|XP_329926.1| hypothetical protein [Neurospora crassa] gi|289...    31  8.5

>dbj|BAD52985.1| unknown protein [Oryza sativa (japonica cultivar-group)]
           gi|53791397|dbj|BAD53434.1| unknown protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 524

 Score = 47.8 bits (112), Expect = 7e-05
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 20/95 (21%)

Query: 1   MQTKVDPPFDVIWVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASV-GGSKSIAL 59
           + T  DPP + +W +SA+ F       GD+       ++L  L+SA +AS    +K +AL
Sbjct: 56  LNTYPDPPLEAVWFFSALSF---HDNPGDL-------RSLLHLLSAFTASSRSAAKPLAL 105

Query: 60  LAP---------KAMKEVKSLVDMILGFMSICCSK 85
           LAP         K  +E ++LV+ +L ++SIC S+
Sbjct: 106 LAPVVSELYHSAKPRREAEALVEAVLSYISICSSR 140


>emb|CAB87696.1| putative protein [Arabidopsis thaliana]
           gi|15239784|ref|NP_196739.1| expressed protein
           [Arabidopsis thaliana] gi|11281142|pir||T48537
           hypothetical protein T22P22.170 - Arabidopsis thaliana
          Length = 494

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 31/105 (29%), Positives = 53/105 (49%), Gaps = 14/105 (13%)

Query: 7   PPFDVIWVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASVGGSKSIALLAP---- 62
           PP +++W YSAI+F   K    D  + +      FQLI + S S  G K ++LL+P    
Sbjct: 57  PPLELVWFYSAIRFYSSKLAFRD--DSVRLTSCFFQLIVSFSDSFSGVKKVSLLSPVVYQ 114

Query: 63  ------KAMKEVKSLVDMILGFMSICC--SKISEEKDLDLVLSFS 99
                    ++  SL++ I+ ++S+ C     +E+ D+ +V  FS
Sbjct: 115 LSRLVISRRRDALSLLEGIVSYISMYCVDEPGNEDDDVLMVSGFS 159


>dbj|BAD94549.1| putative protein [Arabidopsis thaliana]
          Length = 504

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 31/105 (29%), Positives = 53/105 (49%), Gaps = 14/105 (13%)

Query: 7   PPFDVIWVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASVGGSKSIALLAP---- 62
           PP +++W YSAI+F   K    D  + +      FQLI + S S  G K ++LL+P    
Sbjct: 57  PPLELVWFYSAIRFYSSKLAFRD--DSVRLTSCFFQLIVSFSDSFSGVKKVSLLSPVVYQ 114

Query: 63  ------KAMKEVKSLVDMILGFMSICC--SKISEEKDLDLVLSFS 99
                    ++  SL++ I+ ++S+ C     +E+ D+ +V  FS
Sbjct: 115 LSRLVISRRRDALSLLEGIVSYISMYCVDEPGNEDDDVLMVSGFS 159


>ref|NP_344144.1| Formate dehydrogenase Alpha subunit (fdhF-2) [Sulfolobus
           solfataricus P2] gi|13816176|gb|AAK42934.1| Formate
           dehydrogenase Alpha subunit (fdhF-2) [Sulfolobus
           solfataricus P2] gi|25387635|pir||G90459 formate
           dehydrogenase Alpha subunit (fdhF-2) [imported] -
           Sulfolobus solfataricus
          Length = 979

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 19/55 (34%), Positives = 31/55 (55%), Gaps = 1/55 (1%)

Query: 42  QLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVL 96
           +L+ ACS  V    SI++ + +AM+  K+ +  IL +  + CS I E  + D VL
Sbjct: 59  KLVRACSTRVEDGMSISVNSKRAMEARKTAISRILRYHKLYCS-ICENNNGDCVL 112


>ref|NP_828814.1| putative IS116/IS110/IS902-family transposase [Streptomyces
           avermitilis MA-4680] gi|29611306|dbj|BAC75349.1|
           putative IS116/IS110/IS902-family transposase
           [Streptomyces avermitilis MA-4680]
          Length = 397

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 20/66 (30%), Positives = 30/66 (45%)

Query: 37  AKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVL 96
           AKA  +       +V G K IA +     KEV +L + I G   +   +  E +  D+VL
Sbjct: 212 AKAAVEAAERQHTAVAGEKVIAQMVHTLAKEVMALNEKITGTEKLIEGRFREHELADIVL 271

Query: 97  SFSSLG 102
           S   +G
Sbjct: 272 SMPGMG 277


>ref|ZP_00386714.1| COG1574: Predicted metal-dependent hydrolase with the TIM-barrel
          fold [Lactobacillus delbrueckii subsp. bulgaricus ATCC
          BAA-365]
          Length = 362

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 15/47 (31%), Positives = 25/47 (52%)

Query: 13 WVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASVGGSKSIAL 59
          W +   K    +S   D L+Q+S  + +F   S C +SVG S+++ L
Sbjct: 22 WGFDESKLAEHRSPTRDDLDQVSTTQPIFLYRSDCHSSVGNSRALEL 68


>ref|XP_656334.1| hypothetical protein 14.t00038 [Entamoeba histolytica HM-1:IMSS]
           gi|56473527|gb|EAL50949.1| hypothetical protein
           14.t00038 [Entamoeba histolytica HM-1:IMSS]
          Length = 1194

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 20/77 (25%), Positives = 39/77 (49%), Gaps = 9/77 (11%)

Query: 22  CRKSLKGDILEQISAAKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSI 81
           C+ +LK  +LE IS A+ +  +IS+    +   ++         ++   L+ +I  F++ 
Sbjct: 510 CKNNLKNGLLEDISIAERIGGMISSILGQIDNYEN--------KEQQHELITLIFIFINE 561

Query: 82  CC-SKISEEKDLDLVLS 97
           C   K   EK LD++L+
Sbjct: 562 CIEDKKCREKQLDIILN 578


>ref|XP_329926.1| hypothetical protein [Neurospora crassa] gi|28920925|gb|EAA30256.1|
           hypothetical protein [Neurospora crassa]
          Length = 463

 Score = 30.8 bits (68), Expect = 8.5
 Identities = 13/50 (26%), Positives = 32/50 (64%), Gaps = 4/50 (8%)

Query: 25  SLKGDILEQISAAKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDM 74
           +L+GD +     A+ +F L+ +C+++  G ++++   P+ + E+ SL+D+
Sbjct: 114 ALRGDPV----LARQVFDLVRSCASTESGDEALSSALPQTIPEMLSLIDL 159


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.321    0.135    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,796,119
Number of Sequences: 2540612
Number of extensions: 4116328
Number of successful extensions: 9524
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9520
Number of HSP's gapped (non-prelim): 8
length of query: 102
length of database: 863,360,394
effective HSP length: 78
effective length of query: 24
effective length of database: 665,192,658
effective search space: 15964623792
effective search space used: 15964623792
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)