BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148342.20 - phase: 0
(129 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN32889.1| ubiquitin extension protein [Heterodera glycines] 96 2e-19
gb|AAP30081.1| ubiquitin extension protein [Heterodera schachtii] 94 6e-19
pir||S42643 ubiquitin / ribosomal protein S27a - potato (fragment) 94 6e-19
gb|AAO38879.1| ubiquitin/ribosomal fusion protein [Malus x domes... 92 2e-18
emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3] 92 4e-18
emb|CAA11269.1| polyubiquitin [Nicotiana tabacum] 92 4e-18
gb|AAA82978.1| polyubiquitin [Filobasidiella neoformans] 92 4e-18
pir||S55244 polyubiquitin 4 - Arabidopsis thaliana 92 4e-18
emb|CAA53293.1| ubiquitin-fusion protein [Acanthamoeba castellan... 91 5e-18
emb|CAA31530.1| ubiquitin [Neurospora crassa] gi|32410739|ref|XP... 91 5e-18
emb|CAA82268.1| polyubiquitin [Acetabularia peniculus] 91 5e-18
gb|AAO43310.1| putative polyubiquitin [Arabidopsis thaliana] 91 5e-18
gb|AAO43303.1| putative polyubiquitin [Arabidopsis thaliana] 91 5e-18
dbj|BAB08310.1| polyubiquitin [Arabidopsis thaliana] gi|18421671... 91 5e-18
gb|AAL09741.1| AT4g05320/C17L7_240 [Arabidopsis thaliana] 91 5e-18
sp|P49634|UBIQ_ACACA Ubiquitin 91 5e-18
gb|AAB68045.1| polyubiquitin [Fragaria x ananassa] 91 5e-18
ref|NP_064949.1| ubiquitin/ribosomal protein [Amsacta moorei ent... 91 5e-18
ref|NP_062613.2| ubiquitin C [Mus musculus] gi|9837286|gb|AAG005... 91 6e-18
emb|CAA66667.1| polyubiquitin [Pinus sylvestris] 91 6e-18
>gb|AAN32889.1| ubiquitin extension protein [Heterodera glycines]
Length = 119
Score = 95.9 bits (237), Expect = 2e-19
Identities = 55/99 (55%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 33 INSLNISLKFCCIVLLAIVVQ---MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGI 89
+N ++ F + LL I MQIFVK L GKT TL+V+SS + VKE I E +GI
Sbjct: 1 MNHFGLTFLFVAVSLLVIAPGCDGMQIFVKTLTGKTITLEVESSDTVDNVKEKIQEKEGI 60
Query: 90 PVQDQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
P QRLIFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 61 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 99
>gb|AAP30081.1| ubiquitin extension protein [Heterodera schachtii]
Length = 122
Score = 94.4 bits (233), Expect = 6e-19
Identities = 55/99 (55%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 33 INSLNISLKFCCIVLLAIVVQ---MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGI 89
+N ++ F I LL I MQIFVK L GKT TL+V+SS + VKE I + +GI
Sbjct: 1 MNHFGLTFLFVVISLLLIAPGCDGMQIFVKTLTGKTITLEVESSDTVDNVKEKIQDKEGI 60
Query: 90 PVQDQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
P QRLIFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 61 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 99
>pir||S42643 ubiquitin / ribosomal protein S27a - potato (fragment)
Length = 126
Score = 94.4 bits (233), Expect = 6e-19
Identities = 59/116 (50%), Positives = 74/116 (62%), Gaps = 1/116 (0%)
Query: 14 ITISNAKKVLLLFSIFLLLINSLNI-SLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKS 72
IT A K L+ + L +S+N +LK ++ + +MQIFVK L GKT TL+V+S
Sbjct: 5 ITKKRACKTLIKWHWQSLHSHSINKETLKAAAPLISLLQAKMQIFVKTLTGKTITLEVES 64
Query: 73 SYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
S I VK I + +GIP QRLIFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 65 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 120
>gb|AAO38879.1| ubiquitin/ribosomal fusion protein [Malus x domestica]
Length = 156
Score = 92.4 bits (228), Expect = 2e-18
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ NRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3]
Length = 172
Score = 91.7 bits (226), Expect = 4e-18
Identities = 52/92 (56%), Positives = 63/92 (67%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151
Score = 91.3 bits (225), Expect = 5e-18
Identities = 49/75 (65%), Positives = 56/75 (74%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 30.4 bits (67), Expect = 10.0
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSS 73
NI + ++L + MQIFVK L GKT TL+V+SS
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172
>emb|CAA11269.1| polyubiquitin [Nicotiana tabacum]
Length = 381
Score = 91.7 bits (226), Expect = 4e-18
Identities = 52/92 (56%), Positives = 63/92 (67%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRL
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 347
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379
Score = 91.7 bits (226), Expect = 4e-18
Identities = 52/92 (56%), Positives = 63/92 (67%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRL
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 271
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303
Score = 91.7 bits (226), Expect = 4e-18
Identities = 52/92 (56%), Positives = 63/92 (67%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 91.7 bits (226), Expect = 4e-18
Identities = 52/92 (56%), Positives = 63/92 (67%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151
Score = 91.3 bits (225), Expect = 5e-18
Identities = 49/75 (65%), Positives = 56/75 (74%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>gb|AAA82978.1| polyubiquitin [Filobasidiella neoformans]
Length = 381
Score = 91.7 bits (226), Expect = 4e-18
Identities = 52/96 (54%), Positives = 64/96 (66%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 191
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QLD RTL+DYN+ KESTLHLVLRL G
Sbjct: 192 QQRLIFAGKQLDDGRTLSDYNIQKESTLHLVLRLRG 227
Score = 90.1 bits (222), Expect = 1e-17
Identities = 51/96 (53%), Positives = 64/96 (66%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 267
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 268 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 303
Score = 90.1 bits (222), Expect = 1e-17
Identities = 51/96 (53%), Positives = 64/96 (66%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP
Sbjct: 56 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 115
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 151
Score = 90.1 bits (222), Expect = 1e-17
Identities = 51/96 (53%), Positives = 64/96 (66%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 343
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 379
Score = 89.0 bits (219), Expect = 2e-17
Identities = 48/75 (64%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>pir||S55244 polyubiquitin 4 - Arabidopsis thaliana
Length = 320
Score = 91.7 bits (226), Expect = 4e-18
Identities = 50/75 (66%), Positives = 55/75 (72%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QLD RTLADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 136
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 137 IQKESTLHLVLRLRG 151
Score = 82.8 bits (203), Expect = 2e-15
Identities = 48/92 (52%), Positives = 59/92 (63%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFV+ L KT L+V+SS VK I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLCG 227
Score = 79.0 bits (193), Expect = 2e-14
Identities = 50/93 (53%), Positives = 59/93 (62%), Gaps = 1/93 (1%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFV L GKT TL+V+SS I VK I + + I QRL
Sbjct: 212 NIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRL 271
Query: 97 IFARMQL-DGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL DG TLADYN+ KESTLHLVLRL G
Sbjct: 272 IFAGEQLEDGYYTLADYNIQKESTLHLVLRLRG 304
Score = 70.5 bits (171), Expect = 9e-12
Identities = 40/75 (53%), Positives = 48/75 (63%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQI K L KT T+ V SS I VK I + +GIP+ QRLIF+ LD RTLADY+
Sbjct: 1 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 60
Query: 114 VTKESTLHLVLRLLG 128
+ K+S LHL LRL G
Sbjct: 61 IQKDSILHLALRLRG 75
>emb|CAA53293.1| ubiquitin-fusion protein [Acanthamoeba castellanii]
gi|630455|pir||S45304 ubiquitin / ribosomal protein
CEP52 - Acanthamoeba castellanii
Length = 128
Score = 91.3 bits (225), Expect = 5e-18
Identities = 49/75 (65%), Positives = 56/75 (74%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>emb|CAA31530.1| ubiquitin [Neurospora crassa] gi|32410739|ref|XP_325850.1|
hypothetical protein ( (X74405) polyubiquitin [Artemia
franciscana] ) [Neurospora crassa]
gi|28920189|gb|EAA29567.1| hypothetical protein (
(X74405) polyubiquitin [Artemia franciscana] )
[Neurospora crassa]
Length = 305
Score = 91.3 bits (225), Expect = 5e-18
Identities = 51/96 (53%), Positives = 65/96 (67%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+SS I VK+ I + +GIP
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPD 267
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 268 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 303
Score = 91.3 bits (225), Expect = 5e-18
Identities = 51/96 (53%), Positives = 65/96 (67%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+SS I VK+ I + +GIP
Sbjct: 56 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPD 115
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 151
Score = 91.3 bits (225), Expect = 5e-18
Identities = 51/96 (53%), Positives = 65/96 (67%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+SS I VK+ I + +GIP
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPD 191
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 227
Score = 90.1 bits (222), Expect = 1e-17
Identities = 48/75 (64%), Positives = 56/75 (74%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>emb|CAA82268.1| polyubiquitin [Acetabularia peniculus]
Length = 423
Score = 91.3 bits (225), Expect = 5e-18
Identities = 52/98 (53%), Positives = 64/98 (65%)
Query: 31 LLINSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIP 90
L + NI + ++L + MQIFVK L GKT TL+V+SS + VK I + +GIP
Sbjct: 95 LTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIP 154
Query: 91 VQDQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 155 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 192
Score = 90.5 bits (223), Expect = 8e-18
Identities = 51/92 (55%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS + VK I + +GIP QRL
Sbjct: 177 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRL 236
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 237 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 268
Score = 90.5 bits (223), Expect = 8e-18
Identities = 51/92 (55%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS + VK I + +GIP QRL
Sbjct: 253 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRL 312
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 313 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 344
Score = 89.7 bits (221), Expect = 1e-17
Identities = 50/92 (54%), Positives = 62/92 (67%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS + VK I + +GIP QR+
Sbjct: 329 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRI 388
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 389 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 420
Score = 87.8 bits (216), Expect = 5e-17
Identities = 50/92 (54%), Positives = 61/92 (65%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS + VK I + +GIP QRL
Sbjct: 25 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRL 84
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ TLADYN+ KESTLHLVLRL G
Sbjct: 85 IFAGKQLEDGLTLADYNIQKESTLHLVLRLRG 116
Score = 58.2 bits (139), Expect = 4e-08
Identities = 29/40 (72%), Positives = 31/40 (77%)
Query: 89 IPVQDQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IP QRLIFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 1 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 40
>gb|AAO43310.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 91.3 bits (225), Expect = 5e-18
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+VKSS I +K I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 21 MQIFVKTLTGKTITLEVKSSDTIDNIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 81 IQKESTLHLVLRLRG 95
Score = 87.0 bits (214), Expect = 9e-17
Identities = 51/92 (55%), Positives = 61/92 (65%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 156 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 215
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLA YN+ KESTLHLVLRL G
Sbjct: 216 IFAGKQLEDGRTLAVYNIQKESTLHLVLRLRG 247
Score = 85.1 bits (209), Expect = 3e-16
Identities = 50/92 (54%), Positives = 60/92 (64%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GK TL+V+SS I VK I + + IP QRL
Sbjct: 80 NIQKESTLHLVLRLRGGMQIFVKTLTGKIITLEVESSDTIDNVKAKIQDKEWIPPDQQRL 139
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 140 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 171
Score = 33.9 bits (76), Expect = 0.90
Identities = 15/19 (78%), Positives = 16/19 (83%)
Query: 110 ADYNVTKESTLHLVLRLLG 128
ADYN+ KE TLHLVLRL G
Sbjct: 1 ADYNIQKEPTLHLVLRLRG 19
>gb|AAO43303.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 91.3 bits (225), Expect = 5e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 231 NIQKESTLHLVLRLRGGMQIFVKNLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRL 290
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 291 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 322
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 4 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 63
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 64 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 95
Score = 87.4 bits (215), Expect = 7e-17
Identities = 51/92 (55%), Positives = 61/92 (65%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + + IP QRL
Sbjct: 155 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRL 214
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 215 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 246
Score = 83.2 bits (204), Expect = 1e-15
Identities = 51/92 (55%), Positives = 61/92 (65%), Gaps = 1/92 (1%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 80 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 139
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLAD N+ KESTLHLVLRL G
Sbjct: 140 IFAGKQLEDGRTLAD-NIQKESTLHLVLRLRG 170
Score = 35.8 bits (81), Expect = 0.24
Identities = 16/19 (84%), Positives = 17/19 (89%)
Query: 110 ADYNVTKESTLHLVLRLLG 128
ADYN+ KESTLHLVLRL G
Sbjct: 1 ADYNIQKESTLHLVLRLRG 19
>dbj|BAB08310.1| polyubiquitin [Arabidopsis thaliana] gi|18421671|ref|NP_568552.1|
polyubiquitin (UBQ9) [Arabidopsis thaliana]
Length = 322
Score = 91.3 bits (225), Expect = 5e-18
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +G+P QRLIFA QLD RTLADYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 139 IQKESTLHLVLRLRG 153
Score = 82.8 bits (203), Expect = 2e-15
Identities = 48/92 (52%), Positives = 59/92 (63%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFV+ L KT L+V+SS VK I + +GIP QRL
Sbjct: 138 NIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRL 197
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 198 IFAGKQLEDGRTLADYNIQKESTLHLVLRLCG 229
Score = 79.0 bits (193), Expect = 2e-14
Identities = 50/93 (53%), Positives = 59/93 (62%), Gaps = 1/93 (1%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFV L GKT TL+V+SS I VK I + + I QRL
Sbjct: 214 NIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRL 273
Query: 97 IFARMQL-DGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL DG TLADYN+ KESTLHLVLRL G
Sbjct: 274 IFAGEQLEDGYYTLADYNIQKESTLHLVLRLRG 306
Score = 70.9 bits (172), Expect = 7e-12
Identities = 40/77 (51%), Positives = 49/77 (62%)
Query: 52 VQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLAD 111
+ MQI K L KT T+ V SS I VK I + +GIP+ QRLIF+ LD RTLAD
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 112 YNVTKESTLHLVLRLLG 128
Y++ K+S LHL LRL G
Sbjct: 61 YSIQKDSILHLALRLRG 77
>gb|AAL09741.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
Length = 381
Score = 91.3 bits (225), Expect = 5e-18
Identities = 52/92 (56%), Positives = 63/92 (67%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L++ MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLSLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379
Score = 90.1 bits (222), Expect = 1e-17
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 88.2 bits (217), Expect = 4e-17
Identities = 51/92 (55%), Positives = 61/92 (65%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVL L G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLSLRG 151
>sp|P49634|UBIQ_ACACA Ubiquitin
Length = 76
Score = 91.3 bits (225), Expect = 5e-18
Identities = 49/75 (65%), Positives = 56/75 (74%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>gb|AAB68045.1| polyubiquitin [Fragaria x ananassa]
Length = 381
Score = 91.3 bits (225), Expect = 5e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIXDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379
Score = 90.1 bits (222), Expect = 1e-17
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>ref|NP_064949.1| ubiquitin/ribosomal protein [Amsacta moorei entomopoxvirus]
gi|9944690|gb|AAG02873.1| AMV167 [Amsacta moorei
entomopoxvirus]
Length = 81
Score = 91.3 bits (225), Expect = 5e-18
Identities = 47/75 (62%), Positives = 57/75 (75%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIF+K L GKT TL+V+SS I +K I + +GIP QRLIFA QLD +RTL+DYN
Sbjct: 1 MQIFIKTLTGKTITLEVESSDTISNIKNKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
++KESTLHLVLRL G
Sbjct: 61 ISKESTLHLVLRLRG 75
>ref|NP_062613.2| ubiquitin C [Mus musculus] gi|9837286|gb|AAG00513.1| polyubiquitin
C [Mus musculus]
Length = 886
Score = 90.9 bits (224), Expect = 6e-18
Identities = 51/96 (53%), Positives = 64/96 (66%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GIP
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 191
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+G RTL+DYN+ KESTLHLVLRL G
Sbjct: 192 QQRLIFAGKQLEGGRTLSDYNIQKESTLHLVLRLRG 227
Score = 88.2 bits (217), Expect = 4e-17
Identities = 50/96 (52%), Positives = 63/96 (65%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GIP
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 343
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 379
Score = 88.2 bits (217), Expect = 4e-17
Identities = 50/96 (52%), Positives = 63/96 (65%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GIP
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 723
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 724 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 759
Score = 88.2 bits (217), Expect = 4e-17
Identities = 50/96 (52%), Positives = 63/96 (65%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GIP
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 571
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 572 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 607
Score = 88.2 bits (217), Expect = 4e-17
Identities = 50/96 (52%), Positives = 63/96 (65%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GIP
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 647
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 648 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 683
Score = 88.2 bits (217), Expect = 4e-17
Identities = 50/96 (52%), Positives = 63/96 (65%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GIP
Sbjct: 56 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 115
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 151
Score = 88.2 bits (217), Expect = 4e-17
Identities = 50/96 (52%), Positives = 63/96 (65%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GIP
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 495
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 496 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 531
Score = 88.2 bits (217), Expect = 4e-17
Identities = 50/96 (52%), Positives = 63/96 (65%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GIP
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 267
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 268 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 303
Score = 88.2 bits (217), Expect = 4e-17
Identities = 50/96 (52%), Positives = 63/96 (65%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GIP
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 799
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 800 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 835
Score = 87.0 bits (214), Expect = 9e-17
Identities = 47/75 (62%), Positives = 54/75 (71%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+ S I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 85.1 bits (209), Expect = 3e-16
Identities = 49/96 (51%), Positives = 62/96 (64%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQ 92
++ NI + ++L + MQIFVK L GKT TL+V+ S I VK I + +GI
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPD 419
Query: 93 DQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
QRLIFA QL+ RTL+DYN+ KESTLHLVLRL G
Sbjct: 420 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 455
Score = 33.1 bits (74), Expect = 1.5
Identities = 20/49 (40%), Positives = 28/49 (56%)
Query: 33 INSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKE 81
++ NI + ++L + MQIFVK L GKT TL V+ S KVK+
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 864
>emb|CAA66667.1| polyubiquitin [Pinus sylvestris]
Length = 761
Score = 90.9 bits (224), Expect = 6e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 440 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 531
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 516 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 575
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 576 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 607
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 592 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 651
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 652 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 683
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 90.5 bits (223), Expect = 8e-18
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 364 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 423
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 455
Score = 90.1 bits (222), Expect = 1e-17
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 89.7 bits (221), Expect = 1e-17
Identities = 51/92 (55%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V++S I VK I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151
Score = 88.2 bits (217), Expect = 4e-17
Identities = 51/92 (55%), Positives = 61/92 (65%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L KT TL+V+SS I VK I + +GIP QRL
Sbjct: 668 NIQKESTLHLVLRLRGGMQIFVKTLTAKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 727
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 728 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 759
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.330 0.145 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,661,980
Number of Sequences: 2540612
Number of extensions: 5758474
Number of successful extensions: 23159
Number of sequences better than 10.0: 1193
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 20812
Number of HSP's gapped (non-prelim): 2398
length of query: 129
length of database: 863,360,394
effective HSP length: 105
effective length of query: 24
effective length of database: 596,596,134
effective search space: 14318307216
effective search space used: 14318307216
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 67 (30.4 bits)
Medicago: description of AC148342.20