BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148291.4 + phase: 0 /pseudo
(659 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC44142.1| putative polyprotein [Cicer arietinum] 879 0.0
emb|CAA73042.1| polyprotein [Ananas comosus] gi|7489851|pir||T07... 801 0.0
gb|AAP52480.1| putative polyprotein [Oryza sativa (japonica cult... 785 0.0
gb|AAP52185.1| putative polyprotein [Oryza sativa (japonica cult... 784 0.0
gb|AAV31378.1| putative polyprotein [Oryza sativa (japonica cult... 783 0.0
gb|AAP52586.1| putative polyprotein [Oryza sativa (japonica cult... 782 0.0
gb|AAP52698.1| putative polyprotein [Oryza sativa (japonica cult... 782 0.0
gb|AAP52558.1| putative polyprotein [Oryza sativa (japonica cult... 781 0.0
ref|XP_472517.1| OSJNBa0011E07.12 [Oryza sativa (japonica cultiv... 781 0.0
ref|XP_471545.1| OSJNBa0019J05.6 [Oryza sativa (japonica cultiva... 781 0.0
ref|NP_917371.1| Putative polyprotein [Oryza sativa (japonica cu... 781 0.0
gb|AAP53043.1| putative retroelement [Oryza sativa (japonica cul... 781 0.0
gb|AAP51922.1| putative polyprotein [Oryza sativa (japonica cult... 781 0.0
emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa (japonica cultivar... 781 0.0
emb|CAE05388.1| OSJNBa0022F16.12 [Oryza sativa (japonica cultiva... 780 0.0
ref|NP_917895.1| putative polyprotein [Oryza sativa (japonica cu... 780 0.0
gb|AAV31278.1| putative polyprotein [Oryza sativa (japonica cult... 780 0.0
emb|CAE04932.2| OSJNBa0017P10.9 [Oryza sativa (japonica cultivar... 779 0.0
ref|XP_475750.1| putative polyprotein [Oryza sativa (japonica cu... 778 0.0
ref|XP_475728.1| putative polyprotein [Oryza sativa (japonica cu... 778 0.0
>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
Length = 655
Score = 879 bits (2272), Expect = 0.0
Identities = 425/656 (64%), Positives = 524/656 (79%), Gaps = 11/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYA LSKCEFWL +V+FLGH+I IAVDP+K++AV W+ ++VT+IRS +GLAGYY
Sbjct: 1 QLYANLSKCEFWLEKVNFLGHVITKEGIAVDPAKIEAVLAWKQPQTVTDIRSLVGLAGYY 60
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIEGF+K+ P TQLT K + F W +CE +F LKR+LT +PVL+LP+ EEP VYC
Sbjct: 61 RRFIEGFAKIVAPLTQLTRKDQPFAWTEKCEENFQLLKRKLTTSPVLVLPQSEEPHEVYC 120
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DAS GLG VLMQ KVVAYASRQL++HE+NYPTHDLELAAVVF LKIWRHYLYG F V
Sbjct: 121 DASHQGLGCVLMQHKKVVAYASRQLKIHERNYPTHDLELAAVVFALKIWRHYLYGCTFTV 180
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
F SDHKSLKYLFDQKELNMRQRRW+E LKD+DF L YHPG ANVVADALSR+++ +
Sbjct: 181 F-----SDHKSLKYLFDQKELNMRQRRWIETLKDFDFTLQYHPGKANVVADALSRRSVSV 235
Query: 241 SAL-MVKEFELLEHFRDMSLVCELSFQSIHLGMLKIDSDFLNSIREAQKVDL--KFVDLM 297
S+L M ++ EL E FRD+ L E + + GM+KI S L I +Q L + +L+
Sbjct: 236 SSLIMARQQELWEAFRDLHLNVEFAPGILKFGMIKISSGLLEDIANSQDDVLIQEKRNLI 295
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
G TE FK+ VLR G++C+P+ ++K ILEE+HKS+LSIHPGATKMY DL+
Sbjct: 296 VQGKTTE---FKIGADNVLRCNGRICVPEITAMRKTILEEAHKSKLSIHPGATKMYQDLR 352
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ +WW G+K+ VA++V CL CQK+KVEHQ+PAG+L PLD+PEWKWDSISMDF+T LP T
Sbjct: 353 QNYWWPGMKKHVAEYVSTCLTCQKAKVEHQRPAGMLQPLDIPEWKWDSISMDFITGLPKT 412
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
R +D+IWV+VDRLTKSAHF+P+ Y V QL EIYI +V+LHGVP+SIVSDRDP+FTS
Sbjct: 413 RRKNDSIWVIVDRLTKSAHFLPVRTTYKVDQLTEIYIAEIVRLHGVPSSIVSDRDPKFTS 472
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FW L +ALG+KLRLSSAYHPQTDGQ+ERT QSLEDLLR CVL+ G+WD LPLIEFT
Sbjct: 473 HFWGALHEALGTKLRLSSAYHPQTDGQTERTNQSLEDLLRACVLDDRGSWDHVLPLIEFT 532
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNS+H+SIGMAP++ALYGR+C+TPLCW++ GE++++GP++V +TT KV+ I+E+MK SQ
Sbjct: 533 YNNSFHTSIGMAPYQALYGRKCQTPLCWYKDGENMIVGPEMVQQTTAKVKKIKEKMKTSQ 592
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
RQKSY DKRR+ LEF++GDHVFLRVTP TGVGRALKS+KLTPKFIGPYQI R+G
Sbjct: 593 DRQKSYADKRRRLLEFEQGDHVFLRVTPTTGVGRALKSKKLTPKFIGPYQIYARIG 648
>emb|CAA73042.1| polyprotein [Ananas comosus] gi|7489851|pir||T07863 probable
polyprotein - pineapple retrotransposon dea1 (fragment)
Length = 871
Score = 801 bits (2069), Expect = 0.0
Identities = 392/666 (58%), Positives = 494/666 (73%), Gaps = 13/666 (1%)
Query: 2 LYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYYR 61
LY KL KCEFWL EV+FLGH+I GS IAVDP K++A+ W L SVTEIRSFLGLAGYYR
Sbjct: 199 LYVKLKKCEFWLREVAFLGHLISGSGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLAGYYR 258
Query: 62 RFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYCD 121
RF+E F+KL+ P T+LT KG F+W+ CERSF ELK+RLT AP+L LP +VVY D
Sbjct: 259 RFVERFAKLSTPLTRLTHKGVKFIWNDACERSFQELKQRLTTAPILTLPVAGAGYVVYSD 318
Query: 122 ASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEVF 181
AS GLG VLMQD KV+AYASRQL+ +EKNYPTHDLELAAVVF LK+WRHYLYG R EV+
Sbjct: 319 ASLNGLGCVLMQDDKVIAYASRQLKEYEKNYPTHDLELAAVVFALKLWRHYLYGERCEVY 378
Query: 182 RFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHMS 241
+DHKSLKYLF QKELN+RQRRWLELLKDYD + YHPG ANVVADALSRK++
Sbjct: 379 -----TDHKSLKYLFTQKELNLRQRRWLELLKDYDLTILYHPGKANVVADALSRKSMENL 433
Query: 242 AL-MVKEFELLEHFRDMSLVCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLMTSG 300
A+ +V + L+E + + L + L L + L+ I+E Q D++ +
Sbjct: 434 AMHVVTQPRLIEQMKRLELEIVTPDTPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKM 493
Query: 301 NDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLKKLF 360
D DF +D G++RFRG++C+P + +K+ IL+E+H++ +IHPG TKMY DLK L+
Sbjct: 494 VDGCTGDFTLDGDGLMRFRGRICVPADSGIKEDILQEAHRAPYAIHPGGTKMYKDLKLLY 553
Query: 361 WWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNTPRG 420
WW G+K+DV +FV CL CQ+ K EH+ PAG L L +P WKW+ I+MDFVT LP + G
Sbjct: 554 WWPGIKKDVGEFVAKCLTCQQVKAEHRVPAGKLQSLPIPVWKWEKITMDFVTGLPRSQAG 613
Query: 421 HDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTSRFW 480
HDAIWV+VDRLTKSAHFIPI+ + +LA++Y+ +V+LHGVP SIVSDRD RF S FW
Sbjct: 614 HDAIWVIVDRLTKSAHFIPIHTTWTGERLAQVYLDEIVRLHGVPTSIVSDRDTRFVSHFW 673
Query: 481 KRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFTYNN 540
+ LQDALG++L S+A+HPQ+DGQSERTIQ+LED+LR CV++ G W HLP+ EF YNN
Sbjct: 674 RSLQDALGTRLDFSTAFHPQSDGQSERTIQTLEDMLRACVIDFQGGWSQHLPMAEFAYNN 733
Query: 541 SYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQSRQ 600
SY +SI MAPFEALYGR+CR+PL W E GES+ LGPD++ E KVR+ RER+ +QSRQ
Sbjct: 734 SYQASIKMAPFEALYGRKCRSPLHWSEVGESLALGPDVLQEAEVKVRIARERLLTAQSRQ 793
Query: 601 KSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG------- 653
+SY D+RR++LEFQ GDHVFL+V+P G+ R KL+P+FIGPY+I +RVG
Sbjct: 794 RSYADRRRRDLEFQVGDHVFLKVSPTRGIKRFGIRGKLSPRFIGPYEILERVGPVAYRLA 853
Query: 654 LPPHLS 659
LPP+LS
Sbjct: 854 LPPNLS 859
>gb|AAP52480.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531782|ref|NP_920193.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|18657010|gb|AAL78097.1| Putative polyprotein [Oryza
sativa]
Length = 1473
Score = 785 bits (2026), Expect = 0.0
Identities = 380/656 (57%), Positives = 487/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 717 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 776
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 777 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLVSAPILILPDPKKGFQVYC 836
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHDL+LAAVV LKIWRHYL+G+R EV
Sbjct: 837 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLKLAAVVHALKIWRHYLFGTRTEV 896
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 897 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 950
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 951 NATEGRQLPLELCKEFERLNLGIVSRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 1006
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+ G + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 1007 KNRRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLK 1066
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
K FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1067 KRFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 1126
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1127 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1186
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1187 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1246
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1247 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 1306
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 1307 SRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRG 1362
>gb|AAP52185.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531192|ref|NP_919898.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|20177640|gb|AAM14695.1| Putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1680
Score = 784 bits (2024), Expect = 0.0
Identities = 379/656 (57%), Positives = 488/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 924 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 983
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
R+FIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 984 RKFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYC 1043
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHDLELAAVV LKIWRHYL+G+R EV
Sbjct: 1044 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEV 1103
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 1104 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 1157
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + + F + L+ ++ +REAQ D ++
Sbjct: 1158 NATEGRQLPLELCKEFERLNLGIVSIGF----VAALEAKPTLIDQVREAQTNDPDIQEIK 1213
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+ G + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 1214 KNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLK 1273
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1274 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPKT 1333
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1334 SLGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1393
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1394 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1453
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1454 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 1513
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 1514 SRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLVPRFVGPYKIVSRRG 1569
>gb|AAV31378.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|54287530|gb|AAV31274.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1400
Score = 783 bits (2023), Expect = 0.0
Identities = 380/656 (57%), Positives = 487/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 717 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 776
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 777 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYC 836
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHDLELAAVV LKIWRHYL+G+R EV
Sbjct: 837 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEV 896
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 897 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 950
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 951 NATEGRQLPLELCQEFERLNLGIVSRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 1006
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+QG + ++C+PDN++LK +IL+E+H + SIHPG+TKMY DLK
Sbjct: 1007 KNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDVILKEAHDTLYSIHPGSTKMYQDLK 1066
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1067 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 1126
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V HGVP IVSDR +FTS
Sbjct: 1127 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCSHGVPKKIVSDRGSQFTS 1186
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1187 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1246
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +SI MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1247 YNNSYQASIQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 1306
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTP GV R KL P+F+GPY+I R G
Sbjct: 1307 SRHKSYADNRRRDLSFEEGDYVYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRG 1362
>gb|AAP52586.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531994|ref|NP_920299.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|22857578|gb|AAN09852.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1715
Score = 782 bits (2020), Expect = 0.0
Identities = 380/656 (57%), Positives = 487/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGHII +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 959 QLYAKFSKCEFWLSEVKFLGHIISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 1018
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 1019 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQVYC 1078
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHD+ELAAVV LKIWRHYL+G+R EV
Sbjct: 1079 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEV 1138
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 1139 Y-----TDHKSLKYIFTQSDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 1192
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 1193 NATEGRQLPLELCKEFERLNLGIVGRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 1248
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+ G + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 1249 KNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLK 1308
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1309 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 1368
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1369 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1428
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1429 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1488
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1489 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 1548
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 1549 SRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRG 1604
>gb|AAP52698.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37532218|ref|NP_920411.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|19225021|gb|AAL86497.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1722
Score = 782 bits (2019), Expect = 0.0
Identities = 379/656 (57%), Positives = 487/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 966 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 1025
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 1026 RRFIENFSKIARPRTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYC 1085
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHDLELAAVV LKIWRHYL+G+R EV
Sbjct: 1086 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEV 1145
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+K+YD G++YHPG ANVVADALSRK +
Sbjct: 1146 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKEYDMGIHYHPGKANVVADALSRKG-YC 1199
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 1200 NATEGRQLPLELCKEFERLNLGIVSRGF----VATLEAKPTLIDQVREAQINDPDIQEIK 1255
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+ G + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 1256 KNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLK 1315
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1316 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 1375
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1376 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1435
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1436 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1495
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1496 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAKEKVKIIQERLRVAQ 1555
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 1556 SRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRG 1611
>gb|AAP52558.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531938|ref|NP_920271.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|22138474|gb|AAM93458.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1406
Score = 781 bits (2018), Expect = 0.0
Identities = 379/656 (57%), Positives = 487/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 650 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 709
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CERSF ELK RL AP+LILP P++ F VYC
Sbjct: 710 RRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQELKSRLISAPILILPDPKKGFQVYC 769
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHD+ELAAVV LKIWRHYL+G+R EV
Sbjct: 770 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEV 829
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 830 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 883
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 884 NATEGRQLPLELCKEFERLNLGIVGRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 939
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+ G + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 940 KNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLK 999
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1000 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 1059
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1060 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1119
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FW++LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1120 NFWEKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1179
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1180 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 1239
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 1240 SRYKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRG 1295
>ref|XP_472517.1| OSJNBa0011E07.12 [Oryza sativa (japonica cultivar-group)]
gi|38346366|emb|CAE04203.2| OSJNBa0011E07.12 [Oryza
sativa (japonica cultivar-group)]
Length = 1473
Score = 781 bits (2018), Expect = 0.0
Identities = 380/656 (57%), Positives = 487/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 717 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 776
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 777 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQVYC 836
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR EKNYPTHDLELAAVV LKIWRHYL+G+R E+
Sbjct: 837 DASKLGLGCVLMQDGKVVAYASRQLRPQEKNYPTHDLELAAVVHALKIWRHYLFGTRTEM 896
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 897 Y-----PDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 950
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 951 NATEGRQLPLELCKEFERLNLGIVSRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 1006
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+QG + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 1007 KNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLK 1066
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+TSLP T
Sbjct: 1067 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITSLPRT 1126
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1127 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1186
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1187 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1246
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1247 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 1306
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 1307 SRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVRRFHTKGKLAPRFVGPYKIVSRRG 1362
>ref|XP_471545.1| OSJNBa0019J05.6 [Oryza sativa (japonica cultivar-group)]
gi|38346421|emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa
(japonica cultivar-group)]
Length = 1616
Score = 781 bits (2018), Expect = 0.0
Identities = 378/656 (57%), Positives = 488/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 860 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 919
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 920 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQVYC 979
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
D SKLGLG VLMQDGKVVAYASRQLR HEKNYPTHD+ELAAVV LKIWRHYL+G+R EV
Sbjct: 980 DVSKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEV 1039
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 1040 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 1093
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 1094 NATEGRQLPLELCKEFERLNLGIVGRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 1149
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+QG + ++C+PDN++LK IL+E+H + SIHPG+TKMY DL+
Sbjct: 1150 KNMRRGKAIGFLEDEQGTVWLGKRICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLR 1209
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1210 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 1269
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1270 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1329
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1330 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1389
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1390 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKVIQERLRVAQ 1449
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I+ R G
Sbjct: 1450 SRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIASRRG 1505
>ref|NP_917371.1| Putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1475
Score = 781 bits (2018), Expect = 0.0
Identities = 378/655 (57%), Positives = 484/655 (73%), Gaps = 11/655 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV LGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 719 QLYAKFSKCEFWLSEVKLLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 778
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CERSF ELK RL AP+LILP P++ F VYC
Sbjct: 779 RRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQELKSRLISAPILILPDPKKGFQVYC 838
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHD+ELAAVV LKIWRHYL+G+R EV
Sbjct: 839 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEV 898
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTL-H 239
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK+ +
Sbjct: 899 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKSYCN 953
Query: 240 MSALMVKEFELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLMT 298
++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 954 VTEGRQLPLELCKEFERLNLGIVGRGF----IAALEAKPTLIDQVREAQINDPDIQEIKK 1009
Query: 299 SGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLKK 358
+ + F D+ G + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK+
Sbjct: 1010 NMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKE 1069
Query: 359 LFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNTP 418
FWW +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1070 RFWWVSMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTS 1129
Query: 419 RGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTSR 478
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1130 SGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSN 1189
Query: 479 FWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFTY 538
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+Y
Sbjct: 1190 FWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSY 1249
Query: 539 NNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQS 598
NNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +QS
Sbjct: 1250 NNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQS 1309
Query: 599 RQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
R KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 1310 RHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRG 1364
>gb|AAP53043.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37532908|ref|NP_920756.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 1679
Score = 781 bits (2017), Expect = 0.0
Identities = 379/656 (57%), Positives = 486/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 687 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 746
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 747 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYC 806
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHDLELAAVV LKIWRHYL+G+R EV
Sbjct: 807 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEV 866
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 867 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 920
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 921 KATEGRQLPLELCKEFERLNLGIVSRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 976
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+QG + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 977 KNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLK 1036
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1037 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 1096
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK A+FIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1097 SSGHDSIWVIVDRLTKVAYFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1156
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1157 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1216
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1217 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 1276
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTP GV R KL P+F+GPY+I R G
Sbjct: 1277 SRHKSYADNRRRDLSFEEGDYVYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRG 1332
>gb|AAP51922.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37530666|ref|NP_919635.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|20042905|gb|AAM08733.1| Putative polyprotein [Oryza
sativa] gi|18997227|gb|AAL83344.1| Putative polyprotein
[Oryza sativa (japonica cultivar-group)]
Length = 1443
Score = 781 bits (2017), Expect = 0.0
Identities = 378/660 (57%), Positives = 484/660 (73%), Gaps = 21/660 (3%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 687 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 746
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 747 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYC 806
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
D SKLGLG VLMQDGKVVAYASRQLR HEKNYPTHDLELAAVV LKIWRHYL+G+R E+
Sbjct: 807 DTSKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEM 866
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTL-- 238
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK
Sbjct: 867 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCN 921
Query: 239 -----HMSALMVKEFELLEHFRDMSLVCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKF 293
+ + KEFE+L ++ +V + L+ ++ +REAQ D
Sbjct: 922 ATEGRQLPLELCKEFEIL----NLGIVSRG-----FVAALEAKPTLIDQVREAQINDPDI 972
Query: 294 VDLMTSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMY 353
++ + + F D+QG + ++C+PDN++LK IL+E+H + SIHPG+TKMY
Sbjct: 973 QEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMY 1032
Query: 354 HDLKKLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTS 413
DLK+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T
Sbjct: 1033 QDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITG 1092
Query: 414 LPNTPRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDP 473
LP T GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR
Sbjct: 1093 LPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGS 1152
Query: 474 RFTSRFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPL 533
+FTS FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP
Sbjct: 1153 QFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPY 1212
Query: 534 IEFTYNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERM 593
EF+YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER+
Sbjct: 1213 AEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERL 1272
Query: 594 KASQSRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
+ +QSR KSY D RR++L F+EGD+V+LRVTP GV R KL P+F+GPY+I R G
Sbjct: 1273 RVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRG 1332
>emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa (japonica cultivar-group)]
gi|50930145|ref|XP_474600.1| OSJNBb0115I21.3 [Oryza
sativa (japonica cultivar-group)]
Length = 1779
Score = 781 bits (2017), Expect = 0.0
Identities = 378/656 (57%), Positives = 487/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 1023 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 1082
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 1083 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQVYC 1142
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHD+ELAAVV LKIWRHYL+G+R EV
Sbjct: 1143 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEV 1202
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVV DALSRK +
Sbjct: 1203 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVVDALSRKG-YC 1256
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 1257 NATEGRQLPLELCKEFERLNLGIVGRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 1312
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+QG + ++C+PDN++LK +L+E+H + SIHPG+TKMY DLK
Sbjct: 1313 KNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAVLKEAHDTLYSIHPGSTKMYQDLK 1372
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1373 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 1432
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1433 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1492
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1493 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1552
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1553 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKVIQERLRVAQ 1612
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 1613 SRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRG 1668
>emb|CAE05388.1| OSJNBa0022F16.12 [Oryza sativa (japonica cultivar-group)]
gi|50930021|ref|XP_474538.1| OSJNBa0022F16.12 [Oryza
sativa (japonica cultivar-group)]
Length = 1138
Score = 780 bits (2015), Expect = 0.0
Identities = 379/656 (57%), Positives = 486/656 (73%), Gaps = 13/656 (1%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 382 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 441
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 442 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLITAPILILPDPKKGFQVYC 501
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHDLELAAVV LKIWRHYL+G+R EV
Sbjct: 502 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEV 561
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 562 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 615
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 616 NATEGRQLPLELCKEFERLNLGIVSRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 671
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+QG + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 672 KNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLK 731
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 732 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 791
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y + LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 792 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSHLAELYMARIVCLHGVPKKIVSDRGSQFTS 851
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 852 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 911
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYG++C TPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 912 YNNSYQASLQMAPYEALYGQKCCTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 971
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 972 SRHKSYVDNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRG 1027
>ref|NP_917895.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1455
Score = 780 bits (2013), Expect = 0.0
Identities = 378/661 (57%), Positives = 482/661 (72%), Gaps = 23/661 (3%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 717 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 776
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P TQL K + W +CERSF ELK RL AP+LILP P++ F VYC
Sbjct: 777 RRFIENFSKIAKPMTQLLQKDVKYKWSKECERSFQELKSRLISAPILILPDPKKGFQVYC 836
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHD+ELAAVV LKIWRHYL+G+R EV
Sbjct: 837 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEV 896
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG NVVADALSRK
Sbjct: 897 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKTNVVADALSRKGYCN 951
Query: 241 SALMVKEFELLEHFRDMSLVCELSFQSIHLGM--------LKIDSDFLNSIREAQKVDLK 292
+ R + L F+ ++LG+ L+ ++ +REAQ D
Sbjct: 952 AT----------EGRQLPLDLCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQINDPD 1001
Query: 293 FVDLMTSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKM 352
++ + + F D+QG + ++C+PDN++LK IL+E+H + SIHPG+TK+
Sbjct: 1002 IQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKI 1061
Query: 353 YHDLKKLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVT 412
Y DLK+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +P WKW+ I MDF+T
Sbjct: 1062 YQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPGWKWEEIGMDFIT 1121
Query: 413 SLPNTPRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRD 472
LP T GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR
Sbjct: 1122 GLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRG 1181
Query: 473 PRFTSRFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLP 532
+FTS FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP
Sbjct: 1182 SQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLP 1241
Query: 533 LIEFTYNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRER 592
EF+YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER
Sbjct: 1242 YAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQER 1301
Query: 593 MKASQSRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRV 652
++ +QSR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R
Sbjct: 1302 LRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRR 1361
Query: 653 G 653
G
Sbjct: 1362 G 1362
>gb|AAV31278.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1727
Score = 780 bits (2013), Expect = 0.0
Identities = 380/661 (57%), Positives = 487/661 (73%), Gaps = 17/661 (2%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I +AVDPS V++V+ W+ K+V+EIRSFLGLAGYY
Sbjct: 896 QLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYY 955
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 956 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYC 1015
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHDL+LAAVV LKIWRHYL+G+R EV
Sbjct: 1016 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLQLAAVVHALKIWRHYLFGTRTEV 1075
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 1076 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 1129
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D ++
Sbjct: 1130 NATEGRQLPLELCKEFERLNLGIVSRGF----VAALEAKPTLIDQVREAQINDPDIQEIK 1185
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+ G +R ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 1186 KNMRRGKAIGFLEDEHGTVRLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLK 1245
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPA LL PL +PEWKW+ I MDF+T LP T
Sbjct: 1246 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPASLLQPLKIPEWKWEEIGMDFITGLPRT 1305
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1306 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1365
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD LP EF+
Sbjct: 1366 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKSLPYAEFS 1425
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1426 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 1485
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVGLPPH 657
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I P H
Sbjct: 1486 SRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVRRFHIKGKLAPRFVGPYKIP----APSH 1541
Query: 658 L 658
L
Sbjct: 1542 L 1542
>emb|CAE04932.2| OSJNBa0017P10.9 [Oryza sativa (japonica cultivar-group)]
gi|50921971|ref|XP_471346.1| OSJNBa0017P10.9 [Oryza
sativa (japonica cultivar-group)]
Length = 1752
Score = 779 bits (2012), Expect = 0.0
Identities = 379/656 (57%), Positives = 489/656 (73%), Gaps = 14/656 (2%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKCEFWLSEV FLGH+I + +AVDPS V++V+ W+ K+ +EIRSFLGLAGYY
Sbjct: 997 QLYAKFSKCEFWLSEVKFLGHVI-SAGVAVDPSNVESVTNWKQPKTASEIRSFLGLAGYY 1055
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P T+L K + W +CE+SF ELK RL AP+LILP P++ F VYC
Sbjct: 1056 RRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYC 1115
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DASKLGLG VLMQDGKVVAYASRQLR HEKNYPTHDLELAAVV LKIWR+YL+G+R EV
Sbjct: 1116 DASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRYYLFGTRTEV 1175
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LNMRQRRWLEL+KDYD G++YHPG ANVVADALSRK +
Sbjct: 1176 Y-----TDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG-YC 1229
Query: 241 SALMVKEF--ELLEHFRDMSL-VCELSFQSIHLGMLKIDSDFLNSIREAQKVDLKFVDLM 297
+A ++ EL + F ++L + F + L+ ++ +REAQ D +++
Sbjct: 1230 NATEGRQLPLELCKEFERLNLGIVSRGF----VAALEAKPTLIDQVREAQINDPDILEIK 1285
Query: 298 TSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGATKMYHDLK 357
+ + F D+QG + ++C+PDN++LK IL+E+H + SIHPG+TKMY DLK
Sbjct: 1286 KNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKETHDTLYSIHPGSTKMYQDLK 1345
Query: 358 KLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDFVTSLPNT 417
+ FWW+ +KR++A++V C +CQ+ K EHQKPAGLL PL +PEWKW+ I MDF+T LP T
Sbjct: 1346 ERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT 1405
Query: 418 PRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSDRDPRFTS 477
GHD+IWV+VDRLTK AHFIP+ Y ++LAE+Y+ +V LHGVP IVSDR +FTS
Sbjct: 1406 SSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTS 1465
Query: 478 RFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 537
FWK+LQ+ +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+WD +LP EF+
Sbjct: 1466 NFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFS 1525
Query: 538 YNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIRERMKASQ 597
YNNSY +S+ MAP+EALYGR+CRTPL W ++GE V G D++ E EKV++I+ER++ +Q
Sbjct: 1526 YNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQ 1585
Query: 598 SRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISDRVG 653
SR KSY D RR++L F+EGD+V+LRVTPL GV R KL P+F+GPY+I R G
Sbjct: 1586 SRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRG 1641
>ref|XP_475750.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|48843822|gb|AAT47081.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1524
Score = 778 bits (2010), Expect = 0.0
Identities = 378/663 (57%), Positives = 485/663 (73%), Gaps = 27/663 (4%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKC+FWL EV FLGHI+ +AVDP+ V++V++W ++VT++RSFLGLAGYY
Sbjct: 768 QLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYY 827
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P TQL K + F+W A+C RSF ELKRRL APVLILP + F VYC
Sbjct: 828 RRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQVYC 887
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DAS+ GLG VLMQDGKVV+YASRQLR HE NYPTHDLELAAVV LKIWRHYL G+R EV
Sbjct: 888 DASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEV 947
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LN+RQRRWLEL+KDYD G++YHPG ANVVADALSRK+ H
Sbjct: 948 Y-----TDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKS-HC 1001
Query: 241 SALMVKEFELLEHFRDMSLVCELSFQSIHLGMLKIDSDFL----------NSIREAQKVD 290
+ V+E L CE+ HL + ++ F+ +R AQ D
Sbjct: 1002 NVAWVEE-----------LCCEVQRDLGHLNLGIVEHGFVAALEAQPTLVEQVRIAQASD 1050
Query: 291 LKFVDLMTSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGAT 350
+ +L + + F D+QG + ++C+P+N+ELK LIL E+H+++ SIHPG+T
Sbjct: 1051 PEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGST 1110
Query: 351 KMYHDLKKLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDF 410
KMY DLK+ FWW ++R++A+FV C +CQ+ K EHQ+PAGLL PL +PEWKW+ I MDF
Sbjct: 1111 KMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDF 1170
Query: 411 VTSLPNTPRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSD 470
+T LP T GHD+IWVVVDRLTK AHFIP++ Y +LAE+Y+ ++ LHGVP IVSD
Sbjct: 1171 ITGLPRTSSGHDSIWVVVDRLTKMAHFIPVHTTYSGKKLAELYLARIMCLHGVPKKIVSD 1230
Query: 471 RDPRFTSRFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSH 530
R +FTS+FW++LQ+ LG++L S+AYHPQTDGQ+ER Q LED+LR C L+ GGAWD
Sbjct: 1231 RGSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKS 1290
Query: 531 LPLIEFTYNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIR 590
LP EF+YNNSY +S+ MAPFEALYGRRCRTPL W ++GE + G ++++E EKVR +R
Sbjct: 1291 LPYAEFSYNNSYQASLQMAPFEALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEKVRAVR 1350
Query: 591 ERMKASQSRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISD 650
ER++ +QSRQKSY D RR+EL F+ GD+V+LRVTPL GV R KL P+F+GPY+I +
Sbjct: 1351 ERLRIAQSRQKSYADNRRRELAFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILE 1410
Query: 651 RVG 653
R G
Sbjct: 1411 RRG 1413
>ref|XP_475728.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|50080333|gb|AAT69667.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1524
Score = 778 bits (2010), Expect = 0.0
Identities = 375/663 (56%), Positives = 486/663 (72%), Gaps = 27/663 (4%)
Query: 1 RLYAKLSKCEFWLSEVSFLGHIIFGSDIAVDPSKVDAVSQWETLKSVTEIRSFLGLAGYY 60
+LYAK SKC+FWL EV FLGHI+ +AVDP+ V++V++W ++VT++RSFLGLAGYY
Sbjct: 768 QLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYY 827
Query: 61 RRFIEGFSKLALPSTQLTCKGKSFVWDAQCERSFNELKRRLTIAPVLILPKPEEPFVVYC 120
RRFIE FSK+A P TQL K + F+W A+C RSF ELKRRL APVLILP + F VYC
Sbjct: 828 RRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQVYC 887
Query: 121 DASKLGLGGVLMQDGKVVAYASRQLRVHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEV 180
DAS+ GLG VLMQDGKVV+YASRQLR HE NYPTHDLELAAVV LKIWRHYL G+R EV
Sbjct: 888 DASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEV 947
Query: 181 FRFEVFSDHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPG*ANVVADALSRKTLHM 240
+ +DHKSLKY+F Q +LN+RQRRWLEL+KDYD G++YHPG ANVVADALSRK+ +
Sbjct: 948 Y-----TDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKS-YC 1001
Query: 241 SALMVKEFELLEHFRDMSLVCELSFQSIHLGMLKIDSDFL----------NSIREAQKVD 290
+ V+E L CE+ HL + ++ F+ +R AQ D
Sbjct: 1002 NVAWVEE-----------LCCEVQHDLEHLNLGIVEHGFVAALEAQPTLVEQVRIAQASD 1050
Query: 291 LKFVDLMTSGNDTEDSDFKVDDQGVLRFRGKVCIPDNEELKKLILEESHKSRLSIHPGAT 350
+ +L + + F D+QG + ++C+P+N+ELK LIL E+H+++ SIHPG+T
Sbjct: 1051 PEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGST 1110
Query: 351 KMYHDLKKLFWWSGLKRDVAQFVYACLICQKSKVEHQKPAGLLTPLDVPEWKWDSISMDF 410
KMY DLK+ FWW ++R++A+FV C +CQ+ K EHQ+PAGLL PL +PEWKW+ I MDF
Sbjct: 1111 KMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDF 1170
Query: 411 VTSLPNTPRGHDAIWVVVDRLTKSAHFIPININYPVAQLAEIYIHSVVKLHGVPASIVSD 470
+T LP T GHD+IWVV+DRLTK AHFIP++ Y +LAE+Y+ ++ LHGVP IVSD
Sbjct: 1171 ITGLPRTSSGHDSIWVVIDRLTKVAHFIPVHTTYSGKKLAELYLARIMCLHGVPKKIVSD 1230
Query: 471 RDPRFTSRFWKRLQDALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSH 530
R +FTS+FW++LQ+ LG++L S+AYHPQTDGQ+ER Q LED+LR C L+ GGAWD
Sbjct: 1231 RGSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKS 1290
Query: 531 LPLIEFTYNNSYHSSIGMAPFEALYGRRCRTPLCWFESGESVVLGPDLVHETTEKVRLIR 590
LP EF+YNNSY +S+ MAPFEALYGRRCRTPL W+++GE + G ++++E EKVR +R
Sbjct: 1291 LPYAEFSYNNSYQASLQMAPFEALYGRRCRTPLFWYQTGERQLFGTEVLNEAEEKVRAVR 1350
Query: 591 ERMKASQSRQKSYHDKRRKELEFQEGDHVFLRVTPLTGVGRALKSRKLTPKFIGPYQISD 650
ER++ +QSRQKSY D RR+EL F+ GD+V+LRVTPL GV R KL P+F+GPY++ +
Sbjct: 1351 ERLRIAQSRQKSYADNRRRELAFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRVLE 1410
Query: 651 RVG 653
R G
Sbjct: 1411 RRG 1413
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.323 0.139 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,130,046,203
Number of Sequences: 2540612
Number of extensions: 47751291
Number of successful extensions: 108961
Number of sequences better than 10.0: 2573
Number of HSP's better than 10.0 without gapping: 2167
Number of HSP's successfully gapped in prelim test: 406
Number of HSP's that attempted gapping in prelim test: 101481
Number of HSP's gapped (non-prelim): 4359
length of query: 659
length of database: 863,360,394
effective HSP length: 135
effective length of query: 524
effective length of database: 520,377,774
effective search space: 272677953576
effective search space used: 272677953576
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)
Medicago: description of AC148291.4