BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148289.7 - phase: 0
(197 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD45720.1| zinc finger protein [Pisum sativum] gi|62901479|s... 381 e-105
dbj|BAD87736.1| putative zinc finger protein [Oryza sativa (japo... 211 9e-54
dbj|BAD87735.1| putative zinc finger protein [Oryza sativa (japo... 211 9e-54
gb|AAF26977.1| zinc finger protein 1 (zfn1) [Arabidopsis thaliana] 210 2e-53
dbj|BAC42614.1| putative zinc finger protein 1 zfn1 [Arabidopsis... 210 2e-53
gb|AAD33769.1| zinc finger protein 1 [Arabidopsis thaliana] 210 2e-53
ref|NP_914841.1| putative zinc finger protein [Oryza sativa (jap... 208 8e-53
ref|NP_851041.1| zinc finger (CCCH-type) family protein [Arabido... 202 6e-51
gb|AAM61197.1| zinc finger protein 3 [Arabidopsis thaliana] gi|4... 202 6e-51
dbj|BAB09623.1| zinc finger protein 3 [Arabidopsis thaliana] gi|... 182 6e-45
gb|AAC63639.1| unknown protein [Arabidopsis thaliana] 157 2e-37
sp|Q84W91|ZFNL1_ARATH Zinc finger CCCH type domain containing pr... 157 2e-37
ref|NP_912810.1| putative zinc finger protein [Oryza sativa (jap... 152 5e-36
dbj|BAD81393.1| putative floral homeotic protein HUA1 [Oryza sat... 152 5e-36
ref|NP_912823.1| putative zinc finger protein [Oryza sativa (jap... 138 8e-32
dbj|BAD81402.1| putative floral homeotic protein HUA1 [Oryza sat... 138 8e-32
dbj|BAD81401.1| putative floral homeotic protein HUA1 [Oryza sat... 138 8e-32
gb|AAT35591.1| zinc-finger transcription factor [Oryza sativa (j... 130 3e-29
gb|AAR24664.1| At5g18550 [Arabidopsis thaliana] gi|62901486|sp|Q... 129 4e-29
ref|NP_197356.1| zinc finger (CCCH-type) family protein [Arabido... 129 4e-29
>gb|AAD45720.1| zinc finger protein [Pisum sativum] gi|62901479|sp|Q9SWF9|ZFNL_PEA
Zinc finger CCCH type domain containing protein ZFN-like
Length = 417
Score = 381 bits (978), Expect = e-105
Identities = 181/197 (91%), Positives = 188/197 (94%), Gaps = 1/197 (0%)
Query: 1 MGSDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQ 60
MGS+SPQQTMRNDQTYGTSHQG+ ENAGLQG YSQYRSGSVPVGFYALQR+NIFPERPDQ
Sbjct: 222 MGSESPQQTMRNDQTYGTSHQGELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQ 281
Query: 61 PECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKF 120
PECQFYMKTGDCKFGAVCRFHHPRER IPAPDCVLSP+GLPLRPGEPLCVFYSRYGICKF
Sbjct: 282 PECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKF 341
Query: 121 GPSCKFDHPMGIFTYNVSASPLAEAAGRRLLGSSSGTAALSLSSEGLVESGSVKPRRLSL 180
GPSCKFDHPMGIFTYNV ASPLA+ GRRLLGSSSGTAALSLSSEGLVESG+ KPRRLSL
Sbjct: 342 GPSCKFDHPMGIFTYNV-ASPLADTPGRRLLGSSSGTAALSLSSEGLVESGTAKPRRLSL 400
Query: 181 SETRPNPSGDDDIDDEG 197
SETRP P GDD+IDDEG
Sbjct: 401 SETRPIPPGDDNIDDEG 417
Score = 102 bits (254), Expect = 6e-21
Identities = 45/76 (59%), Positives = 53/76 (69%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
FPER QPECQ+Y+KTG CKFGA CRFHHP+++ A L+ LG PLRP E +Y
Sbjct: 72 FPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYYL 131
Query: 114 RYGICKFGPSCKFDHP 129
R G CKFG +CKF HP
Sbjct: 132 RTGQCKFGNTCKFHHP 147
Score = 82.4 bits (202), Expect = 7e-15
Identities = 33/76 (43%), Positives = 48/76 (62%), Gaps = 1/76 (1%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PE P +P+C +Y++TG C+FGA CRF+HP R + + P R G+P C +Y
Sbjct: 27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKG-EFPERLGQPECQYYL 85
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +C+F HP
Sbjct: 86 KTGTCKFGATCRFHHP 101
Score = 47.8 bits (112), Expect = 2e-04
Identities = 16/31 (51%), Positives = 24/31 (76%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPR 84
+P RP++ E +Y++TG CKFG C+FHHP+
Sbjct: 118 YPLRPNESERAYYLRTGQCKFGNTCKFHHPQ 148
>dbj|BAD87736.1| putative zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 322
Score = 211 bits (537), Expect = 9e-54
Identities = 105/164 (64%), Positives = 123/164 (74%), Gaps = 8/164 (4%)
Query: 3 SDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPE 62
S+S Q+ QTYGTS Q D +AG QG+ S YRS S PV YALQREN+FPERPDQPE
Sbjct: 162 SESRLQSPGAQQTYGTSQQVDA-SAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPE 220
Query: 63 CQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGP 122
CQ+YMKTGDCKFGAVC+FHHPR R++P PDCVLSP+GLPLRPGE LC FYSRYGICKFG
Sbjct: 221 CQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGA 280
Query: 123 SCKFDH-----PMGIFTYNVSASPLAEAAGRRLLGSSSGTAALS 161
+CKFDH PMG++ Y +++ + RRLL S S +A S
Sbjct: 281 NCKFDHPTMAPPMGVYAYGSASTNVPMV--RRLLQSPSASAYTS 322
Score = 102 bits (255), Expect = 5e-21
Identities = 43/76 (56%), Positives = 53/76 (69%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QPECQ+Y+KTG CKFG C+FHHPRE+ A L+ LG PLRP E C +Y
Sbjct: 5 YPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYL 64
Query: 114 RYGICKFGPSCKFDHP 129
+ G CK+G +CKF HP
Sbjct: 65 KTGQCKYGNTCKFHHP 80
>dbj|BAD87735.1| putative zinc finger protein [Oryza sativa (japonica
cultivar-group)] gi|62901482|sp|Q5JLB5|ZFNL2_ORYSA Zinc
finger CCCH type domain containing protein ZFN-like 2
Length = 439
Score = 211 bits (537), Expect = 9e-54
Identities = 105/164 (64%), Positives = 123/164 (74%), Gaps = 8/164 (4%)
Query: 3 SDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPE 62
S+S Q+ QTYGTS Q D +AG QG+ S YRS S PV YALQREN+FPERPDQPE
Sbjct: 279 SESRLQSPGAQQTYGTSQQVDA-SAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPE 337
Query: 63 CQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGP 122
CQ+YMKTGDCKFGAVC+FHHPR R++P PDCVLSP+GLPLRPGE LC FYSRYGICKFG
Sbjct: 338 CQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGA 397
Query: 123 SCKFDH-----PMGIFTYNVSASPLAEAAGRRLLGSSSGTAALS 161
+CKFDH PMG++ Y +++ + RRLL S S +A S
Sbjct: 398 NCKFDHPTMAPPMGVYAYGSASTNVPMV--RRLLQSPSASAYTS 439
Score = 102 bits (255), Expect = 5e-21
Identities = 43/76 (56%), Positives = 53/76 (69%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QPECQ+Y+KTG CKFG C+FHHPRE+ A L+ LG PLRP E C +Y
Sbjct: 122 YPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYL 181
Query: 114 RYGICKFGPSCKFDHP 129
+ G CK+G +CKF HP
Sbjct: 182 KTGQCKYGNTCKFHHP 197
Score = 85.5 bits (210), Expect = 8e-16
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER +P+C +Y++TG C+FG CRF+HP++R + + P R G+P C +Y
Sbjct: 77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG-EYPERMGQPECQYYL 135
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFGP+CKF HP
Sbjct: 136 KTGTCKFGPTCKFHHP 151
Score = 47.0 bits (110), Expect = 3e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 95 LSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 129
+ P P R GEP C +Y R G+C+FG SC+F+HP
Sbjct: 72 MQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHP 106
>gb|AAF26977.1| zinc finger protein 1 (zfn1) [Arabidopsis thaliana]
Length = 377
Score = 210 bits (534), Expect = 2e-53
Identities = 108/188 (57%), Positives = 129/188 (68%), Gaps = 27/188 (14%)
Query: 1 MGSDSPQQTMRNDQTYGTSHQGDPENAGLQ--GVYSQYRSGS-VPVG-FYALQRENIFPE 56
+GS SP T NDQ Y Q + +G Q G +S Y GS VP+G +YAL REN+FPE
Sbjct: 195 LGSVSPSGT-GNDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPE 253
Query: 57 RPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYG 116
RP QPECQFYMKTGDCKFG VC+FHHPR+R P PDC+LS +GLPLRPGEPLCVFY+RYG
Sbjct: 254 RPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYG 313
Query: 117 ICKFGPSCKFDHPMGIFTYNVSASPLAEAAGRRLLGSSSGTAALSLSSEGLVESGSVKPR 176
ICKFGPSCKFDHPM +FTY+ +AS ++ +VE+ + K R
Sbjct: 314 ICKFGPSCKFDHPMRVFTYDNTAS----------------------ETDEVVETSTGKSR 351
Query: 177 RLSLSETR 184
RLS+SETR
Sbjct: 352 RLSVSETR 359
Score = 97.8 bits (242), Expect = 2e-19
Identities = 57/147 (38%), Positives = 77/147 (51%), Gaps = 11/147 (7%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QPEC++Y+KTG CKFG C+FHHPR + A L+ LG PLR E C ++
Sbjct: 62 YPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFL 121
Query: 114 RYGICKFGPSCKFDHP------MGIFTYNVSASPLAEA---AGRRLLGSSSGTAALSLSS 164
R G CKFG +CKF+HP M + T + P + A A R SS A +
Sbjct: 122 RTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSS--YASLIMP 179
Query: 165 EGLVESGSVKPRRLSLSETRPNPSGDD 191
+G+V P L P+ +G+D
Sbjct: 180 QGVVPVQGWNPYSGQLGSVSPSGTGND 206
Score = 86.3 bits (212), Expect = 5e-16
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PERP +P+C +Y++TG C+FG+ CRF+HPR+R + + P R G+P C +Y
Sbjct: 17 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRG-EYPERIGQPECEYYL 75
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +CKF HP
Sbjct: 76 KTGTCKFGVTCKFHHP 91
>dbj|BAC42614.1| putative zinc finger protein 1 zfn1 [Arabidopsis thaliana]
gi|62901378|sp|Q8GXX7|ZFN1_ARATH Zinc finger CCCH type
domain containing protein ZFN1
gi|18396338|ref|NP_566183.1| zinc finger (CCCH-type)
family protein [Arabidopsis thaliana]
Length = 397
Score = 210 bits (534), Expect = 2e-53
Identities = 108/188 (57%), Positives = 129/188 (68%), Gaps = 27/188 (14%)
Query: 1 MGSDSPQQTMRNDQTYGTSHQGDPENAGLQ--GVYSQYRSGS-VPVG-FYALQRENIFPE 56
+GS SP T NDQ Y Q + +G Q G +S Y GS VP+G +YAL REN+FPE
Sbjct: 215 LGSVSPSGT-GNDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPE 273
Query: 57 RPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYG 116
RP QPECQFYMKTGDCKFG VC+FHHPR+R P PDC+LS +GLPLRPGEPLCVFY+RYG
Sbjct: 274 RPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYG 333
Query: 117 ICKFGPSCKFDHPMGIFTYNVSASPLAEAAGRRLLGSSSGTAALSLSSEGLVESGSVKPR 176
ICKFGPSCKFDHPM +FTY+ +AS ++ +VE+ + K R
Sbjct: 334 ICKFGPSCKFDHPMRVFTYDNTAS----------------------ETDEVVETSTGKSR 371
Query: 177 RLSLSETR 184
RLS+SETR
Sbjct: 372 RLSVSETR 379
Score = 97.8 bits (242), Expect = 2e-19
Identities = 57/147 (38%), Positives = 77/147 (51%), Gaps = 11/147 (7%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QPEC++Y+KTG CKFG C+FHHPR + A L+ LG PLR E C ++
Sbjct: 82 YPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFL 141
Query: 114 RYGICKFGPSCKFDHP------MGIFTYNVSASPLAEA---AGRRLLGSSSGTAALSLSS 164
R G CKFG +CKF+HP M + T + P + A A R SS A +
Sbjct: 142 RTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSS--YASLIMP 199
Query: 165 EGLVESGSVKPRRLSLSETRPNPSGDD 191
+G+V P L P+ +G+D
Sbjct: 200 QGVVPVQGWNPYSGQLGSVSPSGTGND 226
Score = 86.3 bits (212), Expect = 5e-16
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PERP +P+C +Y++TG C+FG+ CRF+HPR+R + + P R G+P C +Y
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRG-EYPERIGQPECEYYL 95
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +CKF HP
Sbjct: 96 KTGTCKFGVTCKFHHP 111
>gb|AAD33769.1| zinc finger protein 1 [Arabidopsis thaliana]
Length = 424
Score = 210 bits (534), Expect = 2e-53
Identities = 108/188 (57%), Positives = 129/188 (68%), Gaps = 27/188 (14%)
Query: 1 MGSDSPQQTMRNDQTYGTSHQGDPENAGLQ--GVYSQYRSGS-VPVG-FYALQRENIFPE 56
+GS SP T NDQ Y Q + +G Q G +S Y GS VP+G +YAL REN+FPE
Sbjct: 215 LGSVSPSGT-GNDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPE 273
Query: 57 RPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYG 116
RP QPECQFYMKTGDCKFG VC+FHHPR+R P PDC+LS +GLPLRPGEPLCVFY+RYG
Sbjct: 274 RPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYG 333
Query: 117 ICKFGPSCKFDHPMGIFTYNVSASPLAEAAGRRLLGSSSGTAALSLSSEGLVESGSVKPR 176
ICKFGPSCKFDHPM +FTY+ +AS ++ +VE+ + K R
Sbjct: 334 ICKFGPSCKFDHPMRVFTYDNTAS----------------------ETDEVVETSTGKSR 371
Query: 177 RLSLSETR 184
RLS+SETR
Sbjct: 372 RLSVSETR 379
Score = 95.9 bits (237), Expect = 6e-19
Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER PEC++Y+KTG CKFG C+FHHPR + A L+ LG PLR E C ++
Sbjct: 82 YPERIGHPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFL 141
Query: 114 RYGICKFGPSCKFDHP------MGIFTYNVSASPLAEA---AGRRLLGSSSGTAALSLSS 164
R G CKFG +CKF+HP M + T + P + A A R SS A +
Sbjct: 142 RTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSS--YASLIMP 199
Query: 165 EGLVESGSVKPRRLSLSETRPNPSGDD 191
+G+V P L P+ +G+D
Sbjct: 200 QGVVPVQGWNPYSGQLGSVSPSGTGND 226
Score = 82.8 bits (203), Expect = 5e-15
Identities = 34/76 (44%), Positives = 49/76 (63%), Gaps = 1/76 (1%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PERP +P+C +Y++TG C+FG+ CR +HPR+R + + P R G P C +Y
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRVNHPRDRELVIATARMRG-EYPERIGHPECEYYL 95
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +CKF HP
Sbjct: 96 KTGTCKFGVTCKFHHP 111
>ref|NP_914841.1| putative zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 420
Score = 208 bits (529), Expect = 8e-53
Identities = 100/156 (64%), Positives = 117/156 (74%), Gaps = 6/156 (3%)
Query: 3 SDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPE 62
S+S Q+ QTYGTS Q D +AG QG+ S YRS S PV YALQREN+FPERPDQPE
Sbjct: 235 SESRLQSPGAQQTYGTSQQVDA-SAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPE 293
Query: 63 CQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGP 122
CQ+YMKTGDCKFGAVC+FHHPR R++P PDCVLSP+GLPLRPGE LC FYSRYGICKFG
Sbjct: 294 CQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGA 353
Query: 123 SCKFDH-----PMGIFTYNVSASPLAEAAGRRLLGS 153
+CKFDH PMG++ Y +++ + G GS
Sbjct: 354 NCKFDHPTMAPPMGVYAYGSASTNVPMIVGIGFSGS 389
Score = 102 bits (255), Expect = 5e-21
Identities = 43/76 (56%), Positives = 53/76 (69%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QPECQ+Y+KTG CKFG C+FHHPRE+ A L+ LG PLRP E C +Y
Sbjct: 78 YPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYL 137
Query: 114 RYGICKFGPSCKFDHP 129
+ G CK+G +CKF HP
Sbjct: 138 KTGQCKYGNTCKFHHP 153
Score = 37.4 bits (85), Expect = 0.24
Identities = 20/59 (33%), Positives = 24/59 (39%), Gaps = 24/59 (40%)
Query: 95 LSPLGLPLRPGEPLCVFYSRYGI------------------------CKFGPSCKFDHP 129
+ P P R GEP C +Y R G+ CKFGP+CKF HP
Sbjct: 49 MQPGPYPERSGEPDCTYYLRTGLCRMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHP 107
>ref|NP_851041.1| zinc finger (CCCH-type) family protein [Arabidopsis thaliana]
gi|62901381|sp|Q8L7N8|ZFN3_ARATH Zinc finger CCCH type
domain containing protein ZFN3
Length = 375
Score = 202 bits (513), Expect = 6e-51
Identities = 99/152 (65%), Positives = 113/152 (74%), Gaps = 9/152 (5%)
Query: 34 SQYRSG-SVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPD 92
S + SG SVP+GFYAL REN+FPERP QPECQFYMKTGDCKFG VC+FHHPR+R P PD
Sbjct: 219 SGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPD 278
Query: 93 CVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTY-NVSASPLAEAAGRRLL 151
CVLS +GLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM +FTY N +ASP +
Sbjct: 279 CVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSS------ 332
Query: 152 GSSSGTAALSLSSEGLVESGSVKPRRLSLSET 183
S A++ L+ S SV+ + SL ET
Sbjct: 333 -SLHQETAITTELRNLLVSSSVEAKPTSLPET 363
Score = 97.1 bits (240), Expect = 3e-19
Identities = 51/118 (43%), Positives = 66/118 (55%), Gaps = 8/118 (6%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QPEC+FY+KTG CKFG C+FHHPR + ++ L PLRP E C ++
Sbjct: 84 YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFL 143
Query: 114 RYGICKFGPSCKFDHPMGIFT---YNVSASPLAEAAGRRLLGSSSGTAALSLSSEGLV 168
R G CKFG +CKF+HP T +V SP+ A L S +G + S S V
Sbjct: 144 RIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSA-----LQSLTGQPSYSWSRTSFV 196
Score = 83.2 bits (204), Expect = 4e-15
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER +P+C +Y++TG C+FG+ CRF+HP +R + + P R G+P C FY
Sbjct: 39 YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERIGQPECEFYL 97
Query: 114 RYGICKFGPSCKFDHPM------GIFTYNVSASPL 142
+ G CKFG +CKF HP G + NV + PL
Sbjct: 98 KTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPL 132
>gb|AAM61197.1| zinc finger protein 3 [Arabidopsis thaliana]
gi|42573387|ref|NP_974790.1| zinc finger (CCCH-type)
family protein [Arabidopsis thaliana]
Length = 354
Score = 202 bits (513), Expect = 6e-51
Identities = 99/152 (65%), Positives = 113/152 (74%), Gaps = 9/152 (5%)
Query: 34 SQYRSG-SVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPD 92
S + SG SVP+GFYAL REN+FPERP QPECQFYMKTGDCKFG VC+FHHPR+R P PD
Sbjct: 198 SGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPD 257
Query: 93 CVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTY-NVSASPLAEAAGRRLL 151
CVLS +GLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM +FTY N +ASP +
Sbjct: 258 CVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSS------ 311
Query: 152 GSSSGTAALSLSSEGLVESGSVKPRRLSLSET 183
S A++ L+ S SV+ + SL ET
Sbjct: 312 -SLHQETAITTELRNLLVSSSVEAKPTSLPET 342
Score = 97.1 bits (240), Expect = 3e-19
Identities = 51/118 (43%), Positives = 66/118 (55%), Gaps = 8/118 (6%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QPEC+FY+KTG CKFG C+FHHPR + ++ L PLRP E C ++
Sbjct: 63 YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFL 122
Query: 114 RYGICKFGPSCKFDHPMGIFT---YNVSASPLAEAAGRRLLGSSSGTAALSLSSEGLV 168
R G CKFG +CKF+HP T +V SP+ A L S +G + S S V
Sbjct: 123 RIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSA-----LQSLTGQPSYSWSRTSFV 175
Score = 83.2 bits (204), Expect = 4e-15
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER +P+C +Y++TG C+FG+ CRF+HP +R + + P R G+P C FY
Sbjct: 18 YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERIGQPECEFYL 76
Query: 114 RYGICKFGPSCKFDHPM------GIFTYNVSASPL 142
+ G CKFG +CKF HP G + NV + PL
Sbjct: 77 KTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPL 111
>dbj|BAB09623.1| zinc finger protein 3 [Arabidopsis thaliana]
gi|22326848|ref|NP_568332.2| zinc finger (CCCH-type)
family protein [Arabidopsis thaliana]
gi|4689376|gb|AAD27875.1| zinc finger protein 3
[Arabidopsis thaliana]
Length = 368
Score = 182 bits (461), Expect = 6e-45
Identities = 93/152 (61%), Positives = 106/152 (69%), Gaps = 16/152 (10%)
Query: 34 SQYRSG-SVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPD 92
S + SG SVP+GFYAL REN+FPERP QPECQFYMKTGDCKFG VC+FHHPR+R P PD
Sbjct: 219 SGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPD 278
Query: 93 CVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTY-NVSASPLAEAAGRRLL 151
CVLS GEPLCVFYSRYGICKFGPSCKFDHPM +FTY N +ASP +
Sbjct: 279 CVLS-------SGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSS------ 325
Query: 152 GSSSGTAALSLSSEGLVESGSVKPRRLSLSET 183
S A++ L+ S SV+ + SL ET
Sbjct: 326 -SLHQETAITTELRNLLVSSSVEAKPTSLPET 356
Score = 97.1 bits (240), Expect = 3e-19
Identities = 51/118 (43%), Positives = 66/118 (55%), Gaps = 8/118 (6%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QPEC+FY+KTG CKFG C+FHHPR + ++ L PLRP E C ++
Sbjct: 84 YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFL 143
Query: 114 RYGICKFGPSCKFDHPMGIFT---YNVSASPLAEAAGRRLLGSSSGTAALSLSSEGLV 168
R G CKFG +CKF+HP T +V SP+ A L S +G + S S V
Sbjct: 144 RIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSA-----LQSLTGQPSYSWSRTSFV 196
Score = 83.2 bits (204), Expect = 4e-15
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER +P+C +Y++TG C+FG+ CRF+HP +R + + P R G+P C FY
Sbjct: 39 YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERIGQPECEFYL 97
Query: 114 RYGICKFGPSCKFDHPM------GIFTYNVSASPL 142
+ G CKFG +CKF HP G + NV + PL
Sbjct: 98 KTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPL 132
>gb|AAC63639.1| unknown protein [Arabidopsis thaliana]
Length = 553
Score = 157 bits (396), Expect = 2e-37
Identities = 86/175 (49%), Positives = 104/175 (59%), Gaps = 13/175 (7%)
Query: 3 SDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPE 62
S Q + YG + Q L GVY S P G +Q+E FPERP +PE
Sbjct: 326 SPGAQHAVGATSLYGVT-QLTSTTPSLPGVYPSLSS---PTG--VIQKEQAFPERPGEPE 379
Query: 63 CQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGP 122
CQ+Y+KTGDCKFG C+FHHPR+R P +CVLSP+GLPLRPG C FY + G CKFG
Sbjct: 380 CQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGS 439
Query: 123 SCKFDHPMGIFTYNVSASPLAEA-----AGRRLLGSSSGTAALSLSSEGLVESGS 172
+CKFDHPMG YN SAS LA+A LLG+ + AA S SS L+ G+
Sbjct: 440 TCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALA--AAPSSSSTELIAGGA 492
Score = 89.4 bits (220), Expect = 5e-17
Identities = 38/76 (50%), Positives = 49/76 (64%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER +P CQFY+KTG CKFGA C+FHHP+ L+ G P+R G+ C +Y
Sbjct: 161 YPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYL 220
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +CKF HP
Sbjct: 221 KTGQCKFGITCKFHHP 236
Score = 84.7 bits (208), Expect = 1e-15
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLG-LPLRPGEPLCVFY 112
+PERP P+C +YM+TG C +G CR++HPR+R + + + G P R GEP C FY
Sbjct: 116 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRA--SVEATVRATGQYPERFGEPPCQFY 173
Query: 113 SRYGICKFGPSCKFDHP 129
+ G CKFG SCKF HP
Sbjct: 174 LKTGTCKFGASCKFHHP 190
Score = 53.5 bits (127), Expect = 3e-06
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 15/70 (21%)
Query: 24 PENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHP 83
P+NAG G S VP+ Y +P R EC +Y+KTG CKFG C+FHHP
Sbjct: 190 PKNAG--GSMSH-----VPLNIYG------YPVREGDNECSYYLKTGQCKFGITCKFHHP 236
Query: 84 RE--RTIPAP 91
+ T+P P
Sbjct: 237 QPAGTTVPPP 246
>sp|Q84W91|ZFNL1_ARATH Zinc finger CCCH type domain containing protein ZFN-like 1
gi|30690809|ref|NP_182306.2| zinc finger (CCCH-type)
family protein [Arabidopsis thaliana]
Length = 468
Score = 157 bits (396), Expect = 2e-37
Identities = 86/175 (49%), Positives = 104/175 (59%), Gaps = 13/175 (7%)
Query: 3 SDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPE 62
S Q + YG + Q L GVY S P G +Q+E FPERP +PE
Sbjct: 241 SPGAQHAVGATSLYGVT-QLTSTTPSLPGVYPSLSS---PTG--VIQKEQAFPERPGEPE 294
Query: 63 CQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGP 122
CQ+Y+KTGDCKFG C+FHHPR+R P +CVLSP+GLPLRPG C FY + G CKFG
Sbjct: 295 CQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGS 354
Query: 123 SCKFDHPMGIFTYNVSASPLAEA-----AGRRLLGSSSGTAALSLSSEGLVESGS 172
+CKFDHPMG YN SAS LA+A LLG+ + AA S SS L+ G+
Sbjct: 355 TCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALA--AAPSSSSTELIAGGA 407
Score = 89.4 bits (220), Expect = 5e-17
Identities = 38/76 (50%), Positives = 49/76 (64%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER +P CQFY+KTG CKFGA C+FHHP+ L+ G P+R G+ C +Y
Sbjct: 87 YPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYL 146
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +CKF HP
Sbjct: 147 KTGQCKFGITCKFHHP 162
Score = 84.7 bits (208), Expect = 1e-15
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLG-LPLRPGEPLCVFY 112
+PERP P+C +YM+TG C +G CR++HPR+R + + + G P R GEP C FY
Sbjct: 42 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRA--SVEATVRATGQYPERFGEPPCQFY 99
Query: 113 SRYGICKFGPSCKFDHP 129
+ G CKFG SCKF HP
Sbjct: 100 LKTGTCKFGASCKFHHP 116
Score = 53.5 bits (127), Expect = 3e-06
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 15/70 (21%)
Query: 24 PENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHP 83
P+NAG G S VP+ Y +P R EC +Y+KTG CKFG C+FHHP
Sbjct: 116 PKNAG--GSMSH-----VPLNIYG------YPVREGDNECSYYLKTGQCKFGITCKFHHP 162
Query: 84 RE--RTIPAP 91
+ T+P P
Sbjct: 163 QPAGTTVPPP 172
>ref|NP_912810.1| putative zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 451
Score = 152 bits (384), Expect = 5e-36
Identities = 67/144 (46%), Positives = 93/144 (64%), Gaps = 2/144 (1%)
Query: 1 MGSDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQ 60
+ S QT++ YG SHQG Y+ S ++P + ++E FP RP Q
Sbjct: 219 VASAGGHQTVQAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMPSS--SSKQEPAFPARPGQ 276
Query: 61 PECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKF 120
PECQ+Y+KTG CKFG+ C++HHP+ P +C+LSPLGLPLRPG C +Y+++G CKF
Sbjct: 277 PECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKF 336
Query: 121 GPSCKFDHPMGIFTYNVSASPLAE 144
GP+CKFDHPMG +Y+ SAS + +
Sbjct: 337 GPTCKFDHPMGTLSYSPSASSITD 360
Score = 94.7 bits (234), Expect = 1e-18
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PERP QP C++YMK G CKFG+ C++ HPRE ++ A +L+ G PLR GE C +Y
Sbjct: 72 YPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQA--VMLNSSGYPLRSGEKDCTYYV 129
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +CKF HP
Sbjct: 130 KTGHCKFGSTCKFHHP 145
Score = 84.7 bits (208), Expect = 1e-15
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 10/82 (12%)
Query: 55 PERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLG-------LPLRPGEP 107
PERP + +C +Y++TG C +G CR++HPR+R A VL+ G P RPG+P
Sbjct: 23 PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAA---VLNGGGKTTHSAEYPERPGQP 79
Query: 108 LCVFYSRYGICKFGPSCKFDHP 129
+C +Y + G CKFG +CK+DHP
Sbjct: 80 VCEYYMKNGTCKFGSNCKYDHP 101
Score = 43.5 bits (101), Expect = 0.003
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 100 LPLRPGEPLCVFYSRYGICKFGPSCKFDHP 129
LP RPGE CV+Y R G C +G +C+++HP
Sbjct: 22 LPERPGEADCVYYLRTGACGYGENCRYNHP 51
>dbj|BAD81393.1| putative floral homeotic protein HUA1 [Oryza sativa (japonica
cultivar-group)] gi|62901483|sp|Q5NAV3|ZFNL3_ORYSA Zinc
finger CCCH type domain containing protein ZFN-like 3
Length = 466
Score = 152 bits (384), Expect = 5e-36
Identities = 67/144 (46%), Positives = 93/144 (64%), Gaps = 2/144 (1%)
Query: 1 MGSDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQ 60
+ S QT++ YG SHQG Y+ S ++P + ++E FP RP Q
Sbjct: 245 VASAGGHQTVQAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMPSS--SSKQEPAFPARPGQ 302
Query: 61 PECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKF 120
PECQ+Y+KTG CKFG+ C++HHP+ P +C+LSPLGLPLRPG C +Y+++G CKF
Sbjct: 303 PECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKF 362
Query: 121 GPSCKFDHPMGIFTYNVSASPLAE 144
GP+CKFDHPMG +Y+ SAS + +
Sbjct: 363 GPTCKFDHPMGTLSYSPSASSITD 386
Score = 94.7 bits (234), Expect = 1e-18
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PERP QP C++YMK G CKFG+ C++ HPRE ++ A +L+ G PLR GE C +Y
Sbjct: 98 YPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQA--VMLNSSGYPLRSGEKDCTYYV 155
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +CKF HP
Sbjct: 156 KTGHCKFGSTCKFHHP 171
Score = 84.7 bits (208), Expect = 1e-15
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 10/82 (12%)
Query: 55 PERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLG-------LPLRPGEP 107
PERP + +C +Y++TG C +G CR++HPR+R A VL+ G P RPG+P
Sbjct: 49 PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAA---VLNGGGKTTHSAEYPERPGQP 105
Query: 108 LCVFYSRYGICKFGPSCKFDHP 129
+C +Y + G CKFG +CK+DHP
Sbjct: 106 VCEYYMKNGTCKFGSNCKYDHP 127
Score = 43.5 bits (101), Expect = 0.003
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 100 LPLRPGEPLCVFYSRYGICKFGPSCKFDHP 129
LP RPGE CV+Y R G C +G +C+++HP
Sbjct: 48 LPERPGEADCVYYLRTGACGYGENCRYNHP 77
>ref|NP_912823.1| putative zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 360
Score = 138 bits (348), Expect = 8e-32
Identities = 63/142 (44%), Positives = 87/142 (60%), Gaps = 2/142 (1%)
Query: 3 SDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPE 62
S QQ ++ YG H G G Y Y S + Q+E+ FPERP QP+
Sbjct: 139 SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNN--QQEHGFPERPGQPD 196
Query: 63 CQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGP 122
CQ+YM+TGDCKFGA C++HHPRE + P +++ L LPLRPG C +Y++ G C++G
Sbjct: 197 CQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGV 256
Query: 123 SCKFDHPMGIFTYNVSASPLAE 144
+CK+DHPMG Y+ SA PL++
Sbjct: 257 ACKYDHPMGTLGYSPSALPLSD 278
Score = 61.2 bits (147), Expect = 2e-08
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 20/75 (26%)
Query: 55 PERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSR 114
PERP + +C +Y++TG C FG CR++HPR+R +Y +
Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTE--------------------YYMK 96
Query: 115 YGICKFGPSCKFDHP 129
G CKFG +CK+ HP
Sbjct: 97 TGTCKFGTNCKYHHP 111
Score = 45.8 bits (107), Expect = 7e-04
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 24 PENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHP 83
PE G + R+G+ GF R N D+ ++YMKTG CKFG C++HHP
Sbjct: 57 PERPGEEDCVYYLRTGAC--GFGDRCRYN---HPRDRGGTEYYMKTGTCKFGTNCKYHHP 111
Query: 84 RERTIPAPDCVLSPLGLPLR 103
++ P +L+ G P+R
Sbjct: 112 KQDGAVLP-VMLNNSGFPIR 130
Score = 43.9 bits (102), Expect = 0.003
Identities = 17/30 (56%), Positives = 21/30 (69%)
Query: 100 LPLRPGEPLCVFYSRYGICKFGPSCKFDHP 129
LP RPGE CV+Y R G C FG C+++HP
Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHP 85
>dbj|BAD81402.1| putative floral homeotic protein HUA1 [Oryza sativa (japonica
cultivar-group)]
Length = 447
Score = 138 bits (348), Expect = 8e-32
Identities = 63/142 (44%), Positives = 87/142 (60%), Gaps = 2/142 (1%)
Query: 3 SDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPE 62
S QQ ++ YG H G G Y Y S + Q+E+ FPERP QP+
Sbjct: 226 SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNN--QQEHGFPERPGQPD 283
Query: 63 CQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGP 122
CQ+YM+TGDCKFGA C++HHPRE + P +++ L LPLRPG C +Y++ G C++G
Sbjct: 284 CQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGV 343
Query: 123 SCKFDHPMGIFTYNVSASPLAE 144
+CK+DHPMG Y+ SA PL++
Sbjct: 344 ACKYDHPMGTLGYSPSALPLSD 365
Score = 90.5 bits (223), Expect = 2e-17
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QP C++YMKTG CKFG C++HHP++ P +L+ G P+R GE C +Y
Sbjct: 76 YPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLP-VMLNNSGFPIRLGEKECSYYM 134
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +CKF HP
Sbjct: 135 KTGQCKFGTTCKFHHP 150
Score = 78.6 bits (192), Expect = 9e-14
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 55 PERPDQPECQFYMKTGDCKFGAVCRFHHPRER---TIPAPDCVLSPLGLPLRPGEPLCVF 111
PERP + +C +Y++TG C FG CR++HPR+R + L P R G+P+C +
Sbjct: 28 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 87
Query: 112 YSRYGICKFGPSCKFDHP 129
Y + G CKFG +CK+ HP
Sbjct: 88 YMKTGTCKFGTNCKYHHP 105
Score = 56.6 bits (135), Expect = 4e-07
Identities = 23/48 (47%), Positives = 28/48 (57%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLP 101
FP R + EC +YMKTG CKFG C+FHHP +P + PL P
Sbjct: 121 FPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGIYPPLQSP 168
Score = 43.9 bits (102), Expect = 0.003
Identities = 17/30 (56%), Positives = 21/30 (69%)
Query: 100 LPLRPGEPLCVFYSRYGICKFGPSCKFDHP 129
LP RPGE CV+Y R G C FG C+++HP
Sbjct: 27 LPERPGEEDCVYYLRTGACGFGDRCRYNHP 56
>dbj|BAD81401.1| putative floral homeotic protein HUA1 [Oryza sativa (japonica
cultivar-group)] gi|62901411|sp|Q5NAW2|ZFNL1_ORYSA Zinc
finger CCCH type domain containing protein ZFN-like 1
Length = 476
Score = 138 bits (348), Expect = 8e-32
Identities = 63/142 (44%), Positives = 87/142 (60%), Gaps = 2/142 (1%)
Query: 3 SDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPE 62
S QQ ++ YG H G G Y Y S + Q+E+ FPERP QP+
Sbjct: 255 SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNN--QQEHGFPERPGQPD 312
Query: 63 CQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGP 122
CQ+YM+TGDCKFGA C++HHPRE + P +++ L LPLRPG C +Y++ G C++G
Sbjct: 313 CQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGV 372
Query: 123 SCKFDHPMGIFTYNVSASPLAE 144
+CK+DHPMG Y+ SA PL++
Sbjct: 373 ACKYDHPMGTLGYSPSALPLSD 394
Score = 90.5 bits (223), Expect = 2e-17
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYS 113
+PER QP C++YMKTG CKFG C++HHP++ P +L+ G P+R GE C +Y
Sbjct: 105 YPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLP-VMLNNSGFPIRLGEKECSYYM 163
Query: 114 RYGICKFGPSCKFDHP 129
+ G CKFG +CKF HP
Sbjct: 164 KTGQCKFGTTCKFHHP 179
Score = 78.6 bits (192), Expect = 9e-14
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 55 PERPDQPECQFYMKTGDCKFGAVCRFHHPRER---TIPAPDCVLSPLGLPLRPGEPLCVF 111
PERP + +C +Y++TG C FG CR++HPR+R + L P R G+P+C +
Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 116
Query: 112 YSRYGICKFGPSCKFDHP 129
Y + G CKFG +CK+ HP
Sbjct: 117 YMKTGTCKFGTNCKYHHP 134
Score = 56.6 bits (135), Expect = 4e-07
Identities = 23/48 (47%), Positives = 28/48 (57%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLP 101
FP R + EC +YMKTG CKFG C+FHHP +P + PL P
Sbjct: 150 FPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGIYPPLQSP 197
Score = 43.9 bits (102), Expect = 0.003
Identities = 17/30 (56%), Positives = 21/30 (69%)
Query: 100 LPLRPGEPLCVFYSRYGICKFGPSCKFDHP 129
LP RPGE CV+Y R G C FG C+++HP
Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHP 85
>gb|AAT35591.1| zinc-finger transcription factor [Oryza sativa (japonica
cultivar-group)] gi|47499870|gb|AAT28673.1| zinc finger
protein [Oryza sativa (japonica cultivar-group)]
Length = 207
Score = 130 bits (326), Expect = 3e-29
Identities = 58/125 (46%), Positives = 80/125 (63%), Gaps = 2/125 (1%)
Query: 20 HQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCR 79
H G G Y Y S + Q+E+ FPERP QP+CQ+YM+TGDCKFGA C+
Sbjct: 3 HHGSSSTIAYGGPYVPYASSTGQSSNN--QQEHGFPERPGQPDCQYYMRTGDCKFGATCK 60
Query: 80 FHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYNVSA 139
+HHPRE + P +++ L LPLRPG C +Y++ G C++G +CK+DHPMG Y+ SA
Sbjct: 61 YHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMGTLGYSPSA 120
Query: 140 SPLAE 144
PL++
Sbjct: 121 LPLSD 125
>gb|AAR24664.1| At5g18550 [Arabidopsis thaliana] gi|62901486|sp|Q6NPN3|ZFNL3_ARATH
Zinc finger CCCH type domain containing protein ZFN-like
3
Length = 465
Score = 129 bits (325), Expect = 4e-29
Identities = 75/179 (41%), Positives = 98/179 (53%), Gaps = 15/179 (8%)
Query: 1 MGSDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQ 60
M S Q +M YG + A Y+SG G +E FP+RP+Q
Sbjct: 254 MPSPGTQPSMGTSSVYGITPLSPSAPA--------YQSGPSSTG--VSNKEQTFPQRPEQ 303
Query: 61 PECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKF 120
PECQ++M+TGDCKFG CRFHHP E P LS +GLPLRPG C ++++GICKF
Sbjct: 304 PECQYFMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPLRPGAVPCTHFAQHGICKF 362
Query: 121 GPSCKFDHPMGIFTYNVSASPLA-EAAGRRLLGSSSGTAALSLSSE---GLVESGSVKP 175
GP+CKFDH +G + + S SP + SS GT A S SS+ L+ S S++P
Sbjct: 363 GPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYPSSLGTLAPSSSSDQCTELISSSSIEP 421
Score = 90.5 bits (223), Expect = 2e-17
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCV----LSPLGLPLRPGEPLC 109
FPER QP CQ +M+TG CKFGA C++HHPR+ D V L+ +G PLRPGE C
Sbjct: 94 FPERMGQPVCQHFMRTGTCKFGASCKYHHPRQG--GGGDSVTPVSLNYMGFPLRPGEKEC 151
Query: 110 VFYSRYGICKFGPSCKFDHPM 130
++ R G CKFG +C++ HP+
Sbjct: 152 SYFMRTGQCKFGSTCRYHHPV 172
Score = 87.0 bits (214), Expect = 3e-16
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLG-LPLRPGEPLCVFY 112
FPERPD+P+C +Y++TG C +G+ CRF+HPR R P + + G P R G+P+C +
Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRA-PVLGGLRTEAGEFPERMGQPVCQHF 106
Query: 113 SRYGICKFGPSCKFDHP 129
R G CKFG SCK+ HP
Sbjct: 107 MRTGTCKFGASCKYHHP 123
Score = 55.5 bits (132), Expect = 9e-07
Identities = 20/38 (52%), Positives = 27/38 (70%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAP 91
FP RP + EC ++M+TG CKFG+ CR+HHP + AP
Sbjct: 142 FPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAP 179
>ref|NP_197356.1| zinc finger (CCCH-type) family protein [Arabidopsis thaliana]
Length = 456
Score = 129 bits (325), Expect = 4e-29
Identities = 75/179 (41%), Positives = 98/179 (53%), Gaps = 15/179 (8%)
Query: 1 MGSDSPQQTMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQ 60
M S Q +M YG + A Y+SG G +E FP+RP+Q
Sbjct: 245 MPSPGTQPSMGTSSVYGITPLSPSAPA--------YQSGPSSTG--VSNKEQTFPQRPEQ 294
Query: 61 PECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKF 120
PECQ++M+TGDCKFG CRFHHP E P LS +GLPLRPG C ++++GICKF
Sbjct: 295 PECQYFMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPLRPGAVPCTHFAQHGICKF 353
Query: 121 GPSCKFDHPMGIFTYNVSASPLA-EAAGRRLLGSSSGTAALSLSSE---GLVESGSVKP 175
GP+CKFDH +G + + S SP + SS GT A S SS+ L+ S S++P
Sbjct: 354 GPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYPSSLGTLAPSSSSDQCTELISSSSIEP 412
Score = 90.5 bits (223), Expect = 2e-17
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCV----LSPLGLPLRPGEPLC 109
FPER QP CQ +M+TG CKFGA C++HHPR+ D V L+ +G PLRPGE C
Sbjct: 85 FPERMGQPVCQHFMRTGTCKFGASCKYHHPRQG--GGGDSVTPVSLNYMGFPLRPGEKEC 142
Query: 110 VFYSRYGICKFGPSCKFDHPM 130
++ R G CKFG +C++ HP+
Sbjct: 143 SYFMRTGQCKFGSTCRYHHPV 163
Score = 87.0 bits (214), Expect = 3e-16
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLG-LPLRPGEPLCVFY 112
FPERPD+P+C +Y++TG C +G+ CRF+HPR R P + + G P R G+P+C +
Sbjct: 39 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRA-PVLGGLRTEAGEFPERMGQPVCQHF 97
Query: 113 SRYGICKFGPSCKFDHP 129
R G CKFG SCK+ HP
Sbjct: 98 MRTGTCKFGASCKYHHP 114
Score = 55.5 bits (132), Expect = 9e-07
Identities = 20/38 (52%), Positives = 27/38 (70%)
Query: 54 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAP 91
FP RP + EC ++M+TG CKFG+ CR+HHP + AP
Sbjct: 133 FPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAP 170
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 386,167,638
Number of Sequences: 2540612
Number of extensions: 17160084
Number of successful extensions: 38856
Number of sequences better than 10.0: 328
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 37684
Number of HSP's gapped (non-prelim): 962
length of query: 197
length of database: 863,360,394
effective HSP length: 121
effective length of query: 76
effective length of database: 555,946,342
effective search space: 42251921992
effective search space used: 42251921992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)
Medicago: description of AC148289.7