Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148289.12 - phase: 0 
         (214 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB78322.1| probable photosystem I chain XI precursor [Arabi...   355  4e-97
emb|CAB53034.1| photosystem I subunit XI precursor [Arabidopsis ...   352  5e-96
dbj|BAA11677.1| subunit of photosystem I [Cucumis sativus]            350  2e-95
gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]         350  2e-95
dbj|BAA09047.1| PsaL [Cucumis sativus] gi|1363479|pir||JC4281 ph...   349  3e-95
emb|CAA45775.1| subunit XI of photosystem I reaction center [Spi...   344  1e-93
pir||A39759 photosystem I 18K protein precursor - barley gi|1312...   300  1e-80
dbj|BAA84771.1| photosystem I subunit PSI-L [Arabidopsis thaliana]    239  5e-62
gb|AAC35660.1| PSI reaction centre subunit XI [Guillardia theta]...   151  1e-35
gb|AAC08108.1| Photosystem I reaction centre subunit XI [Porphyr...   150  2e-35
ref|YP_063666.1| photosystem I reaction center subunit XI [Graci...   149  7e-35
ref|NP_683194.1| photosystem I subunit XI [Thermosynechococcus e...   148  9e-35
pdb|1JB0|L Chain L, Crystal Structure Of Photosystem I: A Photos...   148  9e-35
ref|ZP_00324141.1| COG0304: 3-oxoacyl-(acyl-carrier-protein) syn...   145  6e-34
emb|CAA45296.1| photosystem I subunit XI [Synechococcus sp.] gi|...   145  6e-34
gb|AAF12996.1| unknown; Photosystem I reaction centre subunit XI...   145  6e-34
sp|P58577|PSAL_ANASP Photosystem I reaction center subunit XI (P...   145  1e-33
ref|ZP_00158131.2| hypothetical protein Avar03006008 [Anabaena v...   144  2e-33
ref|NP_442961.1| photosystem I subunit XI [Synechocystis sp. PCC...   143  3e-33
gb|AAC04841.1| photosystem I subunit XI [Fischerella sp. PCC 760...   142  5e-33

>emb|CAB78322.1| probable photosystem I chain XI precursor [Arabidopsis thaliana]
           gi|4586256|emb|CAB40997.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|21592939|gb|AAM64889.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|20453409|gb|AAM19943.1| AT4g12800/T20K18_150
           [Arabidopsis thaliana] gi|17933283|gb|AAL48225.1|
           AT4g12800/T20K18_150 [Arabidopsis thaliana]
           gi|16649159|gb|AAL24431.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|16226622|gb|AAL16216.1| AT4g12800/T20K18_150
           [Arabidopsis thaliana] gi|15235490|ref|NP_193016.1|
           photosystem I reaction center subunit XI, chloroplast
           (PSI-L) / PSI subunit V [Arabidopsis thaliana]
           gi|7488011|pir||T06638 photosystem I chain XI precursor
           - Arabidopsis thaliana gi|18203449|sp|Q9SUI4|PSAL_ARATH
           Photosystem I reaction center subunit XI, chloroplast
           precursor (PSI-L) (PSI subunit V)
          Length = 219

 Score =  355 bits (912), Expect = 4e-97
 Identities = 174/218 (79%), Positives = 197/218 (89%), Gaps = 6/218 (2%)

Query: 2   AAASPMASQLKSSFT-----RPLVTPRGLCGSSPLHQLPSRRQFNFTVKAIQSEKPNYQV 56
           A+ASPMASQL+SSF+     + L  P+G+ G+ P    P++R  +FTV+A++S+K  +QV
Sbjct: 3   ASASPMASQLRSSFSSASLSQRLAVPKGISGA-PFGVSPTKRVSSFTVRAVKSDKTTFQV 61

Query: 57  IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPGYRTAVNPLLRG+EVGLAHGFFLVGPFVK
Sbjct: 62  VQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVK 121

Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPL 176
           AGPLRNT YAGSAGSLAAAGL+VILS+CLTIYG+SSF EG+PSIAPSLTLTGRKKQPD L
Sbjct: 122 AGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQL 181

Query: 177 QTADGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
           QTADGW+KFTGGFFFGGISGVTWAYFLLYVLDLPYFVK
Sbjct: 182 QTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219


>emb|CAB53034.1| photosystem I subunit XI precursor [Arabidopsis thaliana]
          Length = 219

 Score =  352 bits (902), Expect = 5e-96
 Identities = 173/218 (79%), Positives = 195/218 (89%), Gaps = 6/218 (2%)

Query: 2   AAASPMASQLKSSFT-----RPLVTPRGLCGSSPLHQLPSRRQFNFTVKAIQSEKPNYQV 56
           A+ASPMASQL+SSF+     + L  P+   G+ P    P++R  +FTV+A++S+K  +QV
Sbjct: 3   ASASPMASQLRSSFSSASLSQRLAVPKQFSGA-PFGVSPTKRVSSFTVRAVKSDKTTFQV 61

Query: 57  IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPGYRTAVNPLLRG+EVGLAHGFFLVGPFVK
Sbjct: 62  VQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVK 121

Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPL 176
           AGPLRNT YAGSAGSLAAAGL+VILS+CLTIYG+SSF EG+PSIAPSLTLTGRKKQPD L
Sbjct: 122 AGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQL 181

Query: 177 QTADGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
           QTADGW+KFTGGFFFGGISGVTWAYFLLYVLDLPYFVK
Sbjct: 182 QTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219


>dbj|BAA11677.1| subunit of photosystem I [Cucumis sativus]
          Length = 217

 Score =  350 bits (898), Expect = 2e-95
 Identities = 172/216 (79%), Positives = 195/216 (89%), Gaps = 6/216 (2%)

Query: 3   AASPMASQLKSSF----TRPLVTPRGLCGSSPLHQLPSRRQFNFTVKAIQSEKPNYQVIQ 58
           A SP+ASQL SSF    TR L++P+GL  +SPL ++P+R   +FT++AIQ++KP +QVIQ
Sbjct: 4   ATSPIASQLSSSFASSNTRALISPKGL-SASPLRRIPTRTH-SFTIRAIQADKPTFQVIQ 61

Query: 59  PINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVKAG 118
           PINGDPFIGSLETPVTSSPL+AWYLSNLP YRTAV+PLLRGIEVGLAHGFFLVGPFVKAG
Sbjct: 62  PINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAG 121

Query: 119 PLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPLQT 178
           PLRNT YAG AGSLAA GLIVILS+CLT+YGV+SFNEG+PS APSLTLTGRKK PDPLQT
Sbjct: 122 PLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQT 181

Query: 179 ADGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
           ADGW+KF+GGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 182 ADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217


>gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]
          Length = 220

 Score =  350 bits (897), Expect = 2e-95
 Identities = 173/218 (79%), Positives = 190/218 (86%), Gaps = 7/218 (3%)

Query: 3   AASPMASQLKSSFTRPL------VTPRGLCGSSPLHQLPSRRQFNFTVKAIQSEKPNYQV 56
           AASPMASQLKS F   L      VTP+G+ GS P    PS R+  FT+KA+Q++KP YQV
Sbjct: 4   AASPMASQLKSKFASSLTRGSGLVTPKGISGS-PFKIFPSTRKSCFTIKAVQTDKPTYQV 62

Query: 57  IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
           IQP+NGDPFIGSLETPVTSSPL+AWYLSNLP YRTAVNPLLRG+EVGLAHGF LVGPFVK
Sbjct: 63  IQPLNGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVK 122

Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPL 176
           AGPLRNTEYAG AGSLAAAGL+VILS+CLTIYG+SSF EG+ S AP+LTLTGRKK PD L
Sbjct: 123 AGPLRNTEYAGGAGSLAAAGLVVILSMCLTIYGISSFKEGEASTAPALTLTGRKKVPDQL 182

Query: 177 QTADGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
           QTA+GWSKFTGGFFFGGISGVTWAYFLLYVLDLPY+VK
Sbjct: 183 QTAEGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYYVK 220


>dbj|BAA09047.1| PsaL [Cucumis sativus] gi|1363479|pir||JC4281 photosystem I protein
           psaL - cucumber gi|18202533|sp|Q39654|PSAL_CUCSA
           Photosystem I reaction center subunit XI, chloroplast
           precursor (PSI-L) (PSI subunit V)
          Length = 217

 Score =  349 bits (896), Expect = 3e-95
 Identities = 172/216 (79%), Positives = 194/216 (89%), Gaps = 6/216 (2%)

Query: 3   AASPMASQLKSSF----TRPLVTPRGLCGSSPLHQLPSRRQFNFTVKAIQSEKPNYQVIQ 58
           A SP ASQL SSF    TR L++P+GL  +SPL ++P+R   +FT++AIQ++KP +QVIQ
Sbjct: 4   ATSPTASQLSSSFASSNTRALISPKGL-SASPLRRIPTRTH-SFTIRAIQADKPTFQVIQ 61

Query: 59  PINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVKAG 118
           PINGDPFIGSLETPVTSSPL+AWYLSNLP YRTAV+PLLRGIEVGLAHGFFLVGPFVKAG
Sbjct: 62  PINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAG 121

Query: 119 PLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPLQT 178
           PLRNT YAG AGSLAA GLIVILS+CLT+YGV+SFNEG+PS APSLTLTGRKK PDPLQT
Sbjct: 122 PLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQT 181

Query: 179 ADGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
           ADGW+KF+GGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 182 ADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217


>emb|CAA45775.1| subunit XI of photosystem I reaction center [Spinacia oleracea]
           gi|479684|pir||S35151 photosystem I chain XI precursor -
           spinach gi|3914473|sp|Q41385|PSAL_SPIOL Photosystem I
           reaction center subunit XI, chloroplast precursor
           (PSI-L) (PSI subunit V)
          Length = 216

 Score =  344 bits (882), Expect = 1e-93
 Identities = 168/215 (78%), Positives = 192/215 (89%), Gaps = 3/215 (1%)

Query: 2   AAASPMASQLKSSFT-RPLVTPRGLCGSSPLHQLPS-RRQFNFTVKAIQSEKPNYQVIQP 59
           A  SPMASQLKS FT + LV P+G+ G + L   PS RR  +FTV+AI++EKP YQVIQP
Sbjct: 3   ATTSPMASQLKSGFTTKALVVPKGISGPA-LRGFPSPRRHTSFTVRAIKTEKPTYQVIQP 61

Query: 60  INGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVKAGP 119
           +NGDPFIG LETPVTSSPL+AWYLSNLP YRTAVNPLLRG+EVGLAHGF LVGPFVKAGP
Sbjct: 62  LNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGP 121

Query: 120 LRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPLQTA 179
           LRNTEYAG+AGSLAAAGL+VILS+CLT+YG++SF EG+PSIAP+LTLTGRKKQPD LQ+A
Sbjct: 122 LRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSA 181

Query: 180 DGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
           DGW+KFTGGFFFGG+SGVTWA FL+YVLDLPY+ K
Sbjct: 182 DGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216


>pir||A39759 photosystem I 18K protein precursor - barley
           gi|131225|sp|P23993|PSAL_HORVU Photosystem I reaction
           center subunit XI, chloroplast precursor (PSI-L) (PSI
           subunit V) gi|167087|gb|AAA62700.1| photosystem I
           hydrophobic protein
          Length = 209

 Score =  300 bits (769), Expect = 1e-80
 Identities = 150/213 (70%), Positives = 170/213 (79%), Gaps = 7/213 (3%)

Query: 2   AAASPMASQLKSSFTRPLVTPRGLCGSSPLHQLPSRRQFNFTVKAIQSEKPNYQVIQPIN 61
           A A PMASQ+  S       PRG+ G+S        R+  F VKA++S+KP YQV+QPIN
Sbjct: 4   AYAPPMASQVMKSGLA-CSKPRGMSGAS------LTRRPRFVVKAVKSDKPTYQVVQPIN 56

Query: 62  GDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVKAGPLR 121
           GDPFIGSLETPVTSSPLVAWYLSNLP YRTAV+PLLRGIEVGLAHG+ LVGPF   GPLR
Sbjct: 57  GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 116

Query: 122 NTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPLQTADG 181
           NT   G AG+L A GL+ ILS+CLT+YGV+SFNEG+PS AP LTLTGRKK+ D LQTA+G
Sbjct: 117 NTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEG 176

Query: 182 WSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
           WS+FTGGFFFGG+SG  WAYFLLYVLDLPYF K
Sbjct: 177 WSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209


>dbj|BAA84771.1| photosystem I subunit PSI-L [Arabidopsis thaliana]
          Length = 124

 Score =  239 bits (609), Expect = 5e-62
 Identities = 114/123 (92%), Positives = 120/123 (96%)

Query: 92  AVNPLLRGIEVGLAHGFFLVGPFVKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVS 151
           AVNPLLRG+EVGLAHGFFLVGPFVKAGPLRNT YAGSAGSLAAAGL+VILS+CLTIYG+S
Sbjct: 2   AVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGIS 61

Query: 152 SFNEGDPSIAPSLTLTGRKKQPDPLQTADGWSKFTGGFFFGGISGVTWAYFLLYVLDLPY 211
           SF EG+PSIAPSLTLTGRKKQPD LQTADGW+KFTGGFFFGGISGVTWAYFLLYVLDLPY
Sbjct: 62  SFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPY 121

Query: 212 FVK 214
           FVK
Sbjct: 122 FVK 124


>gb|AAC35660.1| PSI reaction centre subunit XI [Guillardia theta]
           gi|11467674|ref|NP_050726.1| photosystem I subunit XI
           [Guillardia theta] gi|6093806|sp|O78469|PSAL_GUITH
           Photosystem I reaction center subunit XI (PSI-L) (PSI
           subunit V)
          Length = 152

 Score =  151 bits (382), Expect = 1e-35
 Identities = 73/150 (48%), Positives = 97/150 (64%), Gaps = 14/150 (9%)

Query: 55  QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
           Q ++P N DPF+G+L TP+T+S      LSNLP YR  ++PLLRG+E+G+ HG+FLVGPF
Sbjct: 3   QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPF 62

Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
            K GPLRN+E A  AG  +A GLI+I++ CL IYGV SFN  D                +
Sbjct: 63  YKLGPLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTNDGG--------------E 108

Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
            LQ+A GW +FT G+  G I G ++AY L+
Sbjct: 109 QLQSAKGWRQFTSGWLVGSIGGASFAYILI 138


>gb|AAC08108.1| Photosystem I reaction centre subunit XI [Porphyra purpurea]
           gi|11465688|ref|NP_053832.1| photosystem I subunit XI
           [Porphyra purpurea] gi|1709823|sp|P51222|PSAL_PORPU
           Photosystem I reaction center subunit XI (PSI-L) (PSI
           subunit V) gi|2147924|pir||S73143 photosystem I chain XI
           - red alga (Porphyra purpurea) chloroplast
          Length = 153

 Score =  150 bits (379), Expect = 2e-35
 Identities = 73/150 (48%), Positives = 97/150 (64%), Gaps = 14/150 (9%)

Query: 55  QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
           + I+P N DPF+G+L TPV++S      L NLP YR  ++PLLRG+E+G+AHG+FL+GPF
Sbjct: 3   EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62

Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
            K GPLR T+ A  AG L++ GLI+IL+ CL++YG  SF   D                D
Sbjct: 63  DKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFTRSD--------------SKD 108

Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
           PLQTA+GW +FT GF  G + G  +AY LL
Sbjct: 109 PLQTAEGWGQFTAGFLVGAVGGSGFAYLLL 138


>ref|YP_063666.1| photosystem I reaction center subunit XI [Gracilaria tenuistipitata
           var. liui] gi|50657756|gb|AAT79741.1| photosystem I
           reaction center subunit XI [Gracilaria tenuistipitata
           var. liui]
          Length = 150

 Score =  149 bits (375), Expect = 7e-35
 Identities = 73/148 (49%), Positives = 98/148 (65%), Gaps = 14/148 (9%)

Query: 57  IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
           IQ  N DPF+G+L TPV++S      L+NLP YR  ++PLLRG+E+G+AHG+FLVGPF K
Sbjct: 5   IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDK 64

Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPL 176
            GPLRNT+ A  +G L+A GLI+IL++CL++YG  SF++ D                D L
Sbjct: 65  LGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDDAK--------------DLL 110

Query: 177 QTADGWSKFTGGFFFGGISGVTWAYFLL 204
           QT +GW +FT GF  G + G  +AY LL
Sbjct: 111 QTTEGWGQFTAGFLVGAVGGSGFAYLLL 138


>ref|NP_683194.1| photosystem I subunit XI [Thermosynechococcus elongatus BP-1]
           gi|34222854|sp|Q8DGB4|PSAL_SYNEL Photosystem I reaction
           center subunit XI (PSI-L) (PSI subunit V)
           gi|22296132|dbj|BAC09956.1| photosystem I subunit XI
           [Thermosynechococcus elongatus BP-1]
          Length = 155

 Score =  148 bits (374), Expect = 9e-35
 Identities = 67/150 (44%), Positives = 100/150 (66%), Gaps = 13/150 (8%)

Query: 55  QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
           ++++P NGDPF+G L TP++ S LV  ++ NLP YR  ++P+LRG+EVG+AHG+FL+GP+
Sbjct: 4   ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPW 63

Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
           VK GPLR+++ A   G ++   LI++ + CL  YG+ SF +G  S              D
Sbjct: 64  VKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SD 110

Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
           PL+T++GWS+FT GFF G +     A+FLL
Sbjct: 111 PLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140


>pdb|1JB0|L Chain L, Crystal Structure Of Photosystem I: A Photosynthetic
           Reaction Center And Core Antenna System From
           Cyanobacteria
          Length = 154

 Score =  148 bits (374), Expect = 9e-35
 Identities = 67/150 (44%), Positives = 100/150 (66%), Gaps = 13/150 (8%)

Query: 55  QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
           ++++P NGDPF+G L TP++ S LV  ++ NLP YR  ++P+LRG+EVG+AHG+FL+GP+
Sbjct: 3   ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPW 62

Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
           VK GPLR+++ A   G ++   LI++ + CL  YG+ SF +G  S              D
Sbjct: 63  VKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SD 109

Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
           PL+T++GWS+FT GFF G +     A+FLL
Sbjct: 110 PLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 139


>ref|ZP_00324141.1| COG0304: 3-oxoacyl-(acyl-carrier-protein) synthase [Trichodesmium
           erythraeum IMS101]
          Length = 161

 Score =  145 bits (367), Expect = 6e-34
 Identities = 68/153 (44%), Positives = 98/153 (63%), Gaps = 12/153 (7%)

Query: 57  IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
           +QP  GDPF+G L TP++ S     ++ NLP YR  ++P+LRG+EVG+AHG+F+VGP+ K
Sbjct: 10  VQPYKGDPFVGHLSTPISDSDFTRAFIGNLPIYRPGLSPILRGLEVGMAHGYFIVGPWTK 69

Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPL 176
            GPLR++  A   G ++   L++I +ICL+ YG+ SF    P  A            DPL
Sbjct: 70  LGPLRDSAVANLGGLISTIALVLIATICLSAYGLVSFQGKSPEGA------------DPL 117

Query: 177 QTADGWSKFTGGFFFGGISGVTWAYFLLYVLDL 209
           +T++GWS+FTGGFF G + G   A+FLL   +L
Sbjct: 118 KTSEGWSQFTGGFFIGAMGGAVVAFFLLENFEL 150


>emb|CAA45296.1| photosystem I subunit XI [Synechococcus sp.] gi|97606|pir||S22209
           photosystem I chain XI - Synechococcus sp
           gi|131226|sp|P25902|PSAL_SYNEN Photosystem I reaction
           center subunit XI (PSI-L) (PSI subunit V)
          Length = 149

 Score =  145 bits (367), Expect = 6e-34
 Identities = 66/150 (44%), Positives = 99/150 (66%), Gaps = 13/150 (8%)

Query: 55  QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
           ++++P NGDPF+G L TP++ S LV  ++ NLP YR  ++P+L G+EVG+AHG+FL+GP+
Sbjct: 4   ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPW 63

Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
           VK GPLR+++ A   G ++   LI++ + CL  YG+ SF +G  S              D
Sbjct: 64  VKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SD 110

Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
           PL+T++GWS+FT GFF G +     A+FLL
Sbjct: 111 PLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140


>gb|AAF12996.1| unknown; Photosystem I reaction centre subunit XI [Cyanidium
           caldarium] gi|11465558|ref|NP_045050.1| photosystem I
           subunit XI [Cyanidium caldarium]
           gi|14423881|sp|Q9TM17|PSAL_CYACA Photosystem I reaction
           center subunit XI (PSI-L) (PSI subunit V)
          Length = 152

 Score =  145 bits (367), Expect = 6e-34
 Identities = 68/148 (45%), Positives = 96/148 (63%), Gaps = 14/148 (9%)

Query: 57  IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
           I+P   +PF+G+L TPV SS +  WYL NLP YR  ++PLLRG+E+G+AHG+F++GPF K
Sbjct: 5   IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYK 64

Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPL 176
            GPLRNT+ +  +G +AA GLI+I SI + IYG+ +F+  + +              D L
Sbjct: 65  LGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKL 110

Query: 177 QTADGWSKFTGGFFFGGISGVTWAYFLL 204
           QTA+GW +   GF  G + G  +AY LL
Sbjct: 111 QTANGWRQLASGFLLGAVGGAGFAYILL 138


>sp|P58577|PSAL_ANASP Photosystem I reaction center subunit XI (PSI-L) (PSI subunit V)
           gi|17135085|dbj|BAB77631.1| photosystem I subunit XI
           [Nostoc sp. PCC 7120] gi|17227603|ref|NP_484151.1|
           photosystem I subunit XI [Nostoc sp. PCC 7120]
          Length = 172

 Score =  145 bits (365), Expect = 1e-33
 Identities = 71/159 (44%), Positives = 97/159 (60%), Gaps = 7/159 (4%)

Query: 45  KAIQSEKPNYQVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGL 104
           K + S+  N +V+ P   DP  G+LETPV +SPLV W+++NLP YR  + P  RG+EVG+
Sbjct: 9   KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68

Query: 105 AHGFFLVGPFVKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSL 164
           AHG+FL GPF K GPLR+   A  AG L A GL+V+ ++ L++Y     N   P+   S+
Sbjct: 69  AHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLALSLYA----NSNPPTALASV 124

Query: 165 TLTGRKKQPDPLQTADGWSKFTGGFFFGGISGVTWAYFL 203
           T+      PD  Q+ +GW+ F   F  GGI G   AYFL
Sbjct: 125 TV---PNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160


>ref|ZP_00158131.2| hypothetical protein Avar03006008 [Anabaena variabilis ATCC 29413]
          Length = 172

 Score =  144 bits (363), Expect = 2e-33
 Identities = 71/159 (44%), Positives = 96/159 (59%), Gaps = 7/159 (4%)

Query: 45  KAIQSEKPNYQVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGL 104
           K + S+  N +V+ P   DP  G+LETPV +SPLV W+++NLP YR  + P  RG+EVG+
Sbjct: 9   KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68

Query: 105 AHGFFLVGPFVKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSL 164
           AHG+FL GPF K GPLR+   A  AG L A GL+V+ ++ L++Y     N   P    S+
Sbjct: 69  AHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLSLSLYA----NSNPPKALASV 124

Query: 165 TLTGRKKQPDPLQTADGWSKFTGGFFFGGISGVTWAYFL 203
           T+      PD  Q+ +GW+ F   F  GGI G   AYFL
Sbjct: 125 TV---PNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160


>ref|NP_442961.1| photosystem I subunit XI [Synechocystis sp. PCC 6803]
           gi|1653863|dbj|BAA18773.1| photosystem I subunit XI
           [Synechocystis sp. PCC 6803]
           gi|585737|sp|P37277|PSAL_SYNY3 Photosystem I reaction
           center subunit XI (PSI-L) (PSI subunit V)
           gi|310724|gb|AAA27296.1| photosystem I subunit
          Length = 157

 Score =  143 bits (361), Expect = 3e-33
 Identities = 68/150 (45%), Positives = 94/150 (62%), Gaps = 13/150 (8%)

Query: 55  QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
           QV+Q  NGDPF+G L TP++ S     ++ NLP YR  ++P+LRG+EVG+AHG+FL+GP+
Sbjct: 6   QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPW 65

Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
              GPLR++EY    G + A  LI++ +  L+ YG+             +T  G +   D
Sbjct: 66  TLLGPLRDSEYQYIGGLIGALALILVATAALSSYGL-------------VTFQGEQGSGD 112

Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
            LQTADGWS+F  GFF GG+ G   AYFLL
Sbjct: 113 TLQTADGWSQFAAGFFVGGMGGAFVAYFLL 142


>gb|AAC04841.1| photosystem I subunit XI [Fischerella sp. PCC 7605]
           gi|3334302|sp|O31126|PSAL_MASLA Photosystem I reaction
           center subunit XI (PSI-L) (PSI subunit V)
          Length = 173

 Score =  142 bits (359), Expect = 5e-33
 Identities = 73/161 (45%), Positives = 97/161 (59%), Gaps = 7/161 (4%)

Query: 49  SEKPNYQVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGF 108
           S+  N +V+ P   DP IG LETP+ SSPLV W++ NLP YR  +    RG+EVG+AHG+
Sbjct: 13  SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGY 72

Query: 109 FLVGPFVKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTG 168
           ++ GPF K GPLRNT  A  AG L+A GLI+IL+  LT+Y  S   +   S+A       
Sbjct: 73  WIFGPFAKLGPLRNTVNANLAGLLSALGLIIILTGALTLYANSKPPKPVKSVA------- 125

Query: 169 RKKQPDPLQTADGWSKFTGGFFFGGISGVTWAYFLLYVLDL 209
               P+  Q+++GW+ F   F  GGI G   AYFL   L+L
Sbjct: 126 TPNPPEAFQSSEGWNNFASAFLIGGIGGAVVAYFLTSNLEL 166


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.320    0.139    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 407,142,636
Number of Sequences: 2540612
Number of extensions: 18839346
Number of successful extensions: 36472
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 36389
Number of HSP's gapped (non-prelim): 58
length of query: 214
length of database: 863,360,394
effective HSP length: 123
effective length of query: 91
effective length of database: 550,865,118
effective search space: 50128725738
effective search space used: 50128725738
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)


Medicago: description of AC148289.12