BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148098.5 + phase: 0
(189 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_467734.1| hypothetical protein [Oryza sativa (japonica cu... 198 6e-50
gb|AAM61352.1| unknown [Arabidopsis thaliana] gi|18406603|ref|NP... 192 4e-48
dbj|BAD37771.1| unknown protein [Oryza sativa (japonica cultivar... 170 2e-41
dbj|BAB10720.1| unnamed protein product [Arabidopsis thaliana] g... 109 4e-23
gb|AAX96247.1| hypothetical protein LOC_Os11g25920 [Oryza sativa... 94 3e-18
gb|AAR20748.1| At3g15240 [Arabidopsis thaliana] gi|45592912|gb|A... 83 3e-15
dbj|BAB02153.1| unnamed protein product [Arabidopsis thaliana] g... 80 4e-14
gb|AAM97767.1| hypothetical protein [Arabidopsis thaliana] 72 1e-11
gb|AAO86853.1| hypothetical protein [Arabidopsis thaliana] 71 1e-11
gb|AAX55134.1| hypothetical protein At2g31280 [Arabidopsis thali... 71 1e-11
gb|AAF80138.1| Contains similarity to an unknown protein T5J8.5 ... 69 5e-11
gb|AAM47959.1| putative protein [Arabidopsis thaliana] gi|182522... 63 5e-09
gb|AAD20673.1| hypothetical protein [Arabidopsis thaliana] gi|32... 56 6e-07
gb|AAD42006.1| expressed protein [Arabidopsis thaliana] gi|32563... 51 2e-05
dbj|BAD81907.1| bHLH transcription factor-like protein [Oryza sa... 50 4e-05
ref|NP_849917.2| expressed protein [Arabidopsis thaliana] gi|325... 47 3e-04
dbj|BAD29456.1| transcription factor-like [Oryza sativa (japonic... 41 0.015
ref|NP_915629.1| P0505D12.9 [Oryza sativa (japonica cultivar-gro... 39 0.074
emb|CAA40544.1| regulatory protein [Zea mays] gi|100921|pir||S16... 39 0.097
gb|AAK16153.1| anthocyanin regulatory B protein [Zea mays] 39 0.097
>ref|XP_467734.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|46390617|dbj|BAD16100.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|46390289|dbj|BAD15739.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 336
Score = 198 bits (504), Expect = 6e-50
Identities = 99/184 (53%), Positives = 124/184 (66%), Gaps = 19/184 (10%)
Query: 11 LLQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIVW 70
LLQHTLR LC+ S+WVYAVFWR++PR +PPP+W+ G DRS+GN+RNWI+ W
Sbjct: 13 LLQHTLRGLCT----QGDSQWVYAVFWRILPRNYPPPKWDLQGGVYDRSRGNRRNWILAW 68
Query: 71 EDGFCDF--NECEQR------------KSGCLNERFGADVFFKMSHEVYSYGEGLVGKVA 116
EDGFC+F + C+Q +G + ++FFKMSH++Y+YGEGLVGKVA
Sbjct: 69 EDGFCNFAASACDQEDTPAAAGYTDYAAAGHEVKGLQPELFFKMSHDIYNYGEGLVGKVA 128
Query: 117 ADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKEGLVQLGS 176
AD+GHKWV S N E N V WN D PR WE Q SGI+TIA+IAV+EG+VQLGS
Sbjct: 129 ADHGHKWV-SQEANEHEINLVTSWNNPADSHPRTWEAQFQSGIKTIALIAVREGVVQLGS 187
Query: 177 FDKV 180
KV
Sbjct: 188 MKKV 191
>gb|AAM61352.1| unknown [Arabidopsis thaliana] gi|18406603|ref|NP_564753.1|
expressed protein [Arabidopsis thaliana]
gi|4249385|gb|AAD14482.1| T2K10.11 [Arabidopsis
thaliana] gi|25404259|pir||A96625 hypothetical protein
T2K10.11 [imported] - Arabidopsis thaliana
Length = 386
Score = 192 bits (488), Expect = 4e-48
Identities = 95/189 (50%), Positives = 129/189 (67%), Gaps = 24/189 (12%)
Query: 11 LLQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIVW 70
LLQHTLR+LC +S+WVYAVFWR++PR +PPP+W+ G + DRS+GN+RNWI+VW
Sbjct: 13 LLQHTLRSLCIHE----NSQWVYAVFWRILPRNYPPPKWD-GQGAYDRSRGNRRNWILVW 67
Query: 71 EDGFCDF-------NECEQRKSGCLNERFG-----------ADVFFKMSHEVYSYGEGLV 112
EDGFC+F + E G + +G ++FFKMSHE+Y+YGEGL+
Sbjct: 68 EDGFCNFAASAAEMSSGEGSGGGGGSAAYGNSDFQQYQGLQPELFFKMSHEIYNYGEGLI 127
Query: 113 GKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKEGLV 172
GKVAAD+ HKW+Y + N E N++ W+ S D PR WE Q SGI+TIA+I+V+EG+V
Sbjct: 128 GKVAADHSHKWIYKE-PNDQEINFLSAWHNSADSYPRTWEAQFQSGIKTIALISVREGVV 186
Query: 173 QLGSFDKVL 181
QLG+ KV+
Sbjct: 187 QLGAVHKVI 195
>dbj|BAD37771.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 353
Score = 170 bits (430), Expect = 2e-41
Identities = 90/188 (47%), Positives = 112/188 (58%), Gaps = 40/188 (21%)
Query: 11 LLQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIVW 70
LLQHTLR+LC TS S+WVYAVFWR++PR +PPP+ I+ W
Sbjct: 13 LLQHTLRSLC---TSGDDSQWVYAVFWRILPRNYPPPK------------------ILAW 51
Query: 71 EDGFCDFN-----------------ECEQRKS-GCLNERFGADVFFKMSHEVYSYGEGLV 112
EDGFC+F ECE+ K G ++FFKMSH++Y+YGEGL+
Sbjct: 52 EDGFCNFAATSAACGDGAAAAYAAAECEETKQVGVAGGGLQPELFFKMSHDIYNYGEGLI 111
Query: 113 GKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKEGLV 172
GKVAAD+ HKWV+ + Q E N + WN D PR WE Q SGIQTIA+IAV+EG+V
Sbjct: 112 GKVAADHSHKWVFKEPQEQ-EINLISSWNNPADSHPRTWEAQFQSGIQTIALIAVREGVV 170
Query: 173 QLGSFDKV 180
QLGS KV
Sbjct: 171 QLGSMKKV 178
>dbj|BAB10720.1| unnamed protein product [Arabidopsis thaliana]
gi|30696395|ref|NP_200201.3| expressed protein
[Arabidopsis thaliana]
Length = 377
Score = 109 bits (272), Expect = 4e-23
Identities = 69/173 (39%), Positives = 89/173 (50%), Gaps = 25/173 (14%)
Query: 12 LQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFG-GTSLDRSKGNKRNWIIVW 70
L LR++C +S W+Y+VFW + PR PR G G + G+ +++W
Sbjct: 21 LHEALRSVCF------NSDWIYSVFWTIRPR----PRVRGGNGCKIGDESGSL---MLMW 67
Query: 71 EDGFCDFNECEQRKSGCLN-------ERFGADVFFKMSHEVYSYGEGLVGKVAADNGHKW 123
EDGFC E CL E F KMS ++Y+YGEGL+GKVA+D HKW
Sbjct: 68 EDGFCGGGRSEDL---CLETDIEGHEEDLVRKAFSKMSIQLYNYGEGLMGKVASDKCHKW 124
Query: 124 VYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKEGLVQLGS 176
V+ + E N W +S D P W Q SGIQTIAVI GL+QLGS
Sbjct: 125 VFKEPSES-EPNLANYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGS 176
>gb|AAX96247.1| hypothetical protein LOC_Os11g25920 [Oryza sativa (japonica
cultivar-group)]
Length = 481
Score = 93.6 bits (231), Expect = 3e-18
Identities = 69/193 (35%), Positives = 91/193 (46%), Gaps = 47/193 (24%)
Query: 12 LQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFG-GTSLDRSKGNKRNWIIVW 70
L LRN+C +S W Y+VFW + PR PR G G + G+ +++W
Sbjct: 31 LHEALRNVC------LNSDWTYSVFWTIRPR----PRCRGGNGCKVGDDNGSL---MLMW 77
Query: 71 EDGFCDFNECEQRKSGCLNERFGAD----VFFKMSHEVYSYGEGLVGKVAADNGHKWVYS 126
EDGFC R + CL + G D F KMS ++Y+YGEGL+GKVA+D HKWV+
Sbjct: 78 EDGFC-----RPRVAECLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFK 132
Query: 127 DTQNGCEANYVGPWNASIDHQP------------RAWEFQLNSGIQ-----------TIA 163
+ CE N W +S D P A L + +Q TIA
Sbjct: 133 EPSE-CEPNIANYWQSSFDASPLAPLLLGGRDLITATTTHLINHLQKQAQHTATATVTIA 191
Query: 164 VIAVKEGLVQLGS 176
VI GL+QLGS
Sbjct: 192 VIQAGHGLLQLGS 204
>gb|AAR20748.1| At3g15240 [Arabidopsis thaliana] gi|45592912|gb|AAS68110.1|
At3g15240 [Arabidopsis thaliana]
Length = 264
Score = 83.2 bits (204), Expect = 3e-15
Identities = 42/80 (52%), Positives = 53/80 (65%), Gaps = 1/80 (1%)
Query: 97 FFKMSHEVYSYGEGLVGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLN 156
F KMS ++Y+YGEGL+GKVA+D HKWV+ + Q E+N W +S D P W Q
Sbjct: 11 FSKMSIQLYNYGEGLMGKVASDKCHKWVFKE-QTESESNASSYWQSSFDAIPSEWNDQFE 69
Query: 157 SGIQTIAVIAVKEGLVQLGS 176
SGI+TIAVI GL+QLGS
Sbjct: 70 SGIRTIAVIQAGHGLLQLGS 89
>dbj|BAB02153.1| unnamed protein product [Arabidopsis thaliana]
gi|15232532|ref|NP_188142.1| expressed protein
[Arabidopsis thaliana]
Length = 251
Score = 79.7 bits (195), Expect = 4e-14
Identities = 40/77 (51%), Positives = 51/77 (65%), Gaps = 1/77 (1%)
Query: 100 MSHEVYSYGEGLVGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSGI 159
MS ++Y+YGEGL+GKVA+D HKWV+ + Q E+N W +S D P W Q SGI
Sbjct: 1 MSIQLYNYGEGLMGKVASDKCHKWVFKE-QTESESNASSYWQSSFDAIPSEWNDQFESGI 59
Query: 160 QTIAVIAVKEGLVQLGS 176
+TIAVI GL+QLGS
Sbjct: 60 RTIAVIQAGHGLLQLGS 76
>gb|AAM97767.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 71.6 bits (174), Expect = 1e-11
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 40/172 (23%)
Query: 10 SLLQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIV 69
S Q L++ C ++ W YAVFW++ +G++ ++
Sbjct: 3 STSQEILKSFCF------NTDWDYAVFWQL------------------NHRGSRM--VLT 36
Query: 70 WEDGFCDFNECEQRKSGCLNERFGADVFFKMSHEVYSYGEGLVGKVAADNGHKWVYSDTQ 129
ED + D + + ++ G V KMS+ VYS GEG+VG+VA H+WV+ +
Sbjct: 37 LEDAYYDHHGTNMHGA---HDPLGXAVA-KMSYHVYSLGEGIVGQVAVSGEHQWVFPENY 92
Query: 130 NGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKE-GLVQLGSFDKV 180
N C N++ + WE Q+++GI+TI V+AV G+VQLGS KV
Sbjct: 93 NNC--------NSAFEFH-NVWESQISAGIKTILVVAVGPCGVVQLGSLCKV 135
>gb|AAO86853.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 71.2 bits (173), Expect = 1e-11
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 40/172 (23%)
Query: 10 SLLQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIV 69
S Q L++ C ++ W YAVFW++ +G++ ++
Sbjct: 3 STSQEILKSFCF------NTDWDYAVFWQL------------------NHRGSRM--VLT 36
Query: 70 WEDGFCDFNECEQRKSGCLNERFGADVFFKMSHEVYSYGEGLVGKVAADNGHKWVYSDTQ 129
ED + D + + ++ G V KMS+ VYS GEG+VG+VA H+WV+ +
Sbjct: 37 LEDAYYDHHGTNMHGA---HDPLGLAVA-KMSYHVYSLGEGIVGQVAVSGEHQWVFPENY 92
Query: 130 NGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKE-GLVQLGSFDKV 180
N C N++ + WE Q+++GI+TI V+AV G+VQLGS KV
Sbjct: 93 NNC--------NSAFEFH-NVWESQISAGIKTILVVAVGPCGVVQLGSLCKV 135
>gb|AAX55134.1| hypothetical protein At2g31280 [Arabidopsis thaliana]
gi|30684893|ref|NP_180686.2| basic helix-loop-helix
(bHLH) protein-related [Arabidopsis thaliana]
Length = 720
Score = 71.2 bits (173), Expect = 1e-11
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 40/172 (23%)
Query: 10 SLLQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIV 69
S Q L++ C ++ W YAVFW++ +G++ ++
Sbjct: 3 STSQEILKSFCF------NTDWDYAVFWQL------------------NHRGSRM--VLT 36
Query: 70 WEDGFCDFNECEQRKSGCLNERFGADVFFKMSHEVYSYGEGLVGKVAADNGHKWVYSDTQ 129
ED + D + + ++ G V KMS+ VYS GEG+VG+VA H+WV+ +
Sbjct: 37 LEDAYYDHHGTNMHGA---HDPLGLAVA-KMSYHVYSLGEGIVGQVAVSGEHQWVFPENY 92
Query: 130 NGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKE-GLVQLGSFDKV 180
N C N++ + WE Q+++GI+TI V+AV G+VQLGS KV
Sbjct: 93 NNC--------NSAFEFH-NVWESQISAGIKTILVVAVGPCGVVQLGSLCKV 135
>gb|AAF80138.1| Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene
gi|42561744|ref|NP_172105.2| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|25406897|pir||H86196 hypothetical protein [imported]
- Arabidopsis thaliana
Length = 1322
Score = 69.3 bits (168), Expect = 5e-11
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 41/174 (23%)
Query: 12 LQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIVWE 71
LQ LR++CS ++ W YAVFW++ + ++ E
Sbjct: 5 LQQILRSICS------NTDWNYAVFWKL---------------------NHHSPMVLTLE 37
Query: 72 DGFCDFNECEQRKSGCLNERFGAD----VFFKMSHEVYSYGEGLVGKVAADNGHKWVYSD 127
D +C +E R D KMS+ V+S GEG+VG+VA H+W++S+
Sbjct: 38 DVYCVNHERGLMPESLHGGRHAHDPLGLAVAKMSYHVHSLGEGIVGQVAISGQHQWIFSE 97
Query: 128 TQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKE-GLVQLGSFDKV 180
N + WE Q+++GI+TI ++AV G+VQLGS KV
Sbjct: 98 YLNDSHSTL---------QVHNGWESQISAGIKTILIVAVGSCGVVQLGSLCKV 142
>gb|AAM47959.1| putative protein [Arabidopsis thaliana] gi|18252213|gb|AAL61939.1|
putative protein [Arabidopsis thaliana]
gi|30696393|ref|NP_851186.1| expressed protein
[Arabidopsis thaliana]
Length = 265
Score = 62.8 bits (151), Expect = 5e-09
Identities = 32/65 (49%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 112 VGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKEGL 171
+GKVA+D HKWV+ + E N W +S D P W Q SGIQTIAVI GL
Sbjct: 1 MGKVASDKCHKWVFKEPSES-EPNLANYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGL 59
Query: 172 VQLGS 176
+QLGS
Sbjct: 60 LQLGS 64
>gb|AAD20673.1| hypothetical protein [Arabidopsis thaliana]
gi|32563000|emb|CAE09169.1| bHLH transcription factor
[Arabidopsis thaliana] gi|25408145|pir||G84718
hypothetical protein At2g31280 [imported] - Arabidopsis
thaliana
Length = 723
Score = 55.8 bits (133), Expect = 6e-07
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 48/153 (31%)
Query: 28 SSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIVWEDGFCDFNECEQRKSGC 87
++ W YAVFW++ +G++ ++ ED + D + +
Sbjct: 41 NTDWDYAVFWQL------------------NHRGSRM--VLTLEDAYYDHHGTNMHGA-- 78
Query: 88 LNERFGADVFFKMSHEVYSYGEGLVGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQ 147
++ G V KMS+ VYS GEG+VG+VA H+WV+ + N C
Sbjct: 79 -HDPLGLAVA-KMSYHVYSLGEGIVGQVAVSGEHQWVFPENYNNC--------------- 121
Query: 148 PRAWEFQLNSGIQTIAVIAVKE-GLVQLGSFDK 179
NS +TI V+AV G+VQLGS K
Sbjct: 122 --------NSAFETILVVAVGPCGVVQLGSLCK 146
>gb|AAD42006.1| expressed protein [Arabidopsis thaliana]
gi|32563002|emb|CAE09170.1| bHLH transcription factor
[Arabidopsis thaliana] gi|25407871|pir||D84670
hypothetical protein At2g27230 [imported] - Arabidopsis
thaliana gi|18401363|ref|NP_565640.1| transcription
factor-related [Arabidopsis thaliana]
Length = 650
Score = 50.8 bits (120), Expect = 2e-05
Identities = 46/181 (25%), Positives = 78/181 (42%), Gaps = 57/181 (31%)
Query: 11 LLQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIVW 70
LL+ LR++C +++W YAVFW++ G + + +++W
Sbjct: 4 LLREALRSMC------VNNQWSYAVFWKI---------------------GCQNSSLLIW 36
Query: 71 EDGFCDFNECEQRKSGCLNERFGADVF-----------FKMSHEVYSYGEGLVGKVAADN 119
E+ C +NE E + G D +++ + GEGLVG+ A
Sbjct: 37 EE--C-YNETESSSNPRRLCGLGVDTQGNEKVQLLTNRMMLNNRIILVGEGLVGRAAFTG 93
Query: 120 GHKWVYSDTQNGCEANYVGPWNASIDHQPRAWE---FQLNSGIQTIAVI-AVKEGLVQLG 175
H+W+ +++ +N + H P Q ++GIQT+AV V G+VQLG
Sbjct: 94 HHQWILANS-----------FNRDV-HPPEVINEMLLQFSAGIQTVAVFPVVPHGVVQLG 141
Query: 176 S 176
S
Sbjct: 142 S 142
>dbj|BAD81907.1| bHLH transcription factor-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 904
Score = 49.7 bits (117), Expect = 4e-05
Identities = 54/196 (27%), Positives = 79/196 (39%), Gaps = 48/196 (24%)
Query: 12 LQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWE--FGGTSLDRSKGNKRNWIIV 69
L+ +LR LC T W YAVFWR R R + +G +R+ G
Sbjct: 7 LRDSLRRLC------TDVGWSYAVFWRAT-RAADSQRLKLVWGDGHYERAAGAPSI---- 55
Query: 70 WEDGFCDFNECEQRKSGCL-----------------------NERFGADVFFKMSHEVYS 106
GF + + K+ L ++R A V M+ +V+
Sbjct: 56 --SGFEAMDLLLKEKAAALRSGTGRGGGGGEGHAADGAAGHSHDRVDALVHKAMAQQVHV 113
Query: 107 YGEGLVGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIA 166
GEG++G+ A H+W+ D + CE D + Q +GIQTIAVI
Sbjct: 114 VGEGVIGQAALTGLHRWIVHDIVDECEEE---------DEVLLEMKGQFCAGIQTIAVIP 164
Query: 167 V-KEGLVQLGSFDKVL 181
V G++QLGS V+
Sbjct: 165 VLPRGVIQLGSTKMVM 180
>ref|NP_849917.2| expressed protein [Arabidopsis thaliana]
gi|32563004|emb|CAE09171.1| bHLH transcription factor
[Arabidopsis thaliana]
Length = 527
Score = 47.0 bits (110), Expect = 3e-04
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 47/170 (27%)
Query: 13 QHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIVWED 72
+H L++LC S W YAVFWR P + I+ +E+
Sbjct: 6 KHILKSLC------LSHGWSYAVFWRYDPI---------------------NSMILRFEE 38
Query: 73 GFCDFNECEQRKSGCLNERFGADVFFKMSHEVYSYGEGLVGKVAADNGHKWVYSDTQNGC 132
+ N+ + M + G+G+VG+VA+ H+W++SDT
Sbjct: 39 AY--------------NDEQSVALVDDMVLQAPILGQGIVGEVASSGNHQWLFSDTLFQW 84
Query: 133 EANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAV-KEGLVQLGSFDKVL 181
E + + R + + QTIA+I + G+VQLGS K+L
Sbjct: 85 EHEFQNQFLCGFKILIRQFTY-----TQTIAIIPLGSSGVVQLGSTQKIL 129
>dbj|BAD29456.1| transcription factor-like [Oryza sativa (japonica cultivar-group)]
Length = 792
Score = 41.2 bits (95), Expect = 0.015
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 95 DVFFKMSHEVYSYGEGLVGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQ 154
+V KM ++V+ GEG++G+ +W+ SDT A N + W+ Q
Sbjct: 45 NVVEKMLNQVHVVGEGIIGRALVSGECQWI-SDTSFSF-AQTSDADNQDLFQGYTWWQHQ 102
Query: 155 LNSGIQTIAVIAVKE-GLVQLGSFDKV 180
GI+TIAVI + + G+ Q GS K+
Sbjct: 103 FLCGIKTIAVIPIADLGVAQFGSMQKI 129
>ref|NP_915629.1| P0505D12.9 [Oryza sativa (japonica cultivar-group)]
Length = 979
Score = 38.9 bits (89), Expect = 0.074
Identities = 49/196 (25%), Positives = 73/196 (37%), Gaps = 62/196 (31%)
Query: 12 LQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWE--FGGTSLDRSKGNKRNWIIV 69
L+ +LR LC T W YAVFWR R R + +G +R+ G
Sbjct: 184 LRDSLRRLC------TDVGWSYAVFWRAT-RAADSQRLKLVWGDGHYERAAGAPSI---- 232
Query: 70 WEDGFCDFNECEQRKSGCL-----------------------NERFGADVFFKMSHEVYS 106
GF + + K+ L ++R A V M+ +V+
Sbjct: 233 --SGFEAMDLLLKEKAAALRSGTGRGGGGGEGHAADGAAGHSHDRVDALVHKAMAQQVHV 290
Query: 107 YGEGLVGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIA 166
GEG++G+ A H+W+ D + CE +TIAVI
Sbjct: 291 VGEGVIGQAALTGLHRWIVHDIVDECEEE-----------------------DETIAVIP 327
Query: 167 V-KEGLVQLGSFDKVL 181
V G++QLGS V+
Sbjct: 328 VLPRGVIQLGSTKMVM 343
>emb|CAA40544.1| regulatory protein [Zea mays] gi|100921|pir||S16594 regulatory
protein B-Peru - maize
Length = 562
Score = 38.5 bits (88), Expect = 0.097
Identities = 52/202 (25%), Positives = 78/202 (37%), Gaps = 39/202 (19%)
Query: 3 SGLPLLHSLLQHTLRNLCS-FPTSSTSSKWVYAVFWRVV----PRIFPPPRWEFGGTSLD 57
S P LLQ R L ++ S W YA+FW + PR+ + G
Sbjct: 4 SASPAQEELLQPAGRPLRKQLAAAARSINWSYALFWSISSTQRPRVLTWTDGFYNGEVKT 63
Query: 58 RSKGNK----------------RNWIIVWEDGFCDFNECEQRKSGCLN-ERFGADVFFKM 100
R + R G CD R G L+ E G ++ +
Sbjct: 64 RKISHSVELTADQLLMQRSEQLRELYEALRSGECDRRGA--RPVGSLSPEDLGDTEWYYV 121
Query: 101 SHEVYSY--GEGLVGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSG 158
Y++ G+GL G+ +A N H W+ C A+ G + PRA ++
Sbjct: 122 ICMTYAFLPGQGLPGRSSASNEHVWL-------CNAHLAGSKDF-----PRAL-LAKSAS 168
Query: 159 IQTIAVIAVKEGLVQLGSFDKV 180
IQTI I + G+++LG+ DKV
Sbjct: 169 IQTIVCIPLMGGVLELGTTDKV 190
>gb|AAK16153.1| anthocyanin regulatory B protein [Zea mays]
Length = 191
Score = 38.5 bits (88), Expect = 0.097
Identities = 52/202 (25%), Positives = 79/202 (38%), Gaps = 39/202 (19%)
Query: 3 SGLPLLHSLLQHTLRNLCS-FPTSSTSSKWVYAVFWRVV----PRIFPPPRWEFGGTSLD 57
S P LLQ R L ++ S W YA+FW + PR+ + G
Sbjct: 4 SACPAQEELLQPAGRPLRKQLAAAARSINWSYALFWSISSTQRPRVLTWTDRFYNGEVKT 63
Query: 58 RSKGNK----------------RNWIIVWEDGFCDFNECEQRKSGCLN-ERFGADVFFKM 100
R + R + G CD R G L+ E G ++ +
Sbjct: 64 RKISHSVELTADQLLMQRSEQLRELYEALQSGECDRRAA--RPVGSLSPEDLGDTEWYYV 121
Query: 101 SHEVYSY--GEGLVGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSG 158
Y++ G+GL G+ +A N H W+ C A+ G + PRA ++
Sbjct: 122 ICMTYAFLPGQGLPGRSSASNEHVWL-------CNAHLAGSKDF-----PRAL-LAKSAC 168
Query: 159 IQTIAVIAVKEGLVQLGSFDKV 180
IQTI I + G+++LG+ DKV
Sbjct: 169 IQTIVCIPLMGGVLELGTTDKV 190
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.138 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 373,038,293
Number of Sequences: 2540612
Number of extensions: 15917593
Number of successful extensions: 34270
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 34212
Number of HSP's gapped (non-prelim): 31
length of query: 189
length of database: 863,360,394
effective HSP length: 121
effective length of query: 68
effective length of database: 555,946,342
effective search space: 37804351256
effective search space used: 37804351256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)
Medicago: description of AC148098.5