BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147963.2 - phase: 0
(129 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM64609.1| phloem-specific lectin PP2-like protein [Arabidop... 104 5e-22
ref|NP_563837.1| SKP1 interacting partner 3-related [Arabidopsis... 104 5e-22
gb|AAC24090.1| Contains similarity to phloem-specific lectin PP2... 104 5e-22
gb|AAU29482.1| At1g56240 [Arabidopsis thaliana] gi|15223489|ref|... 100 1e-20
gb|AAQ62432.1| At1g56250 [Arabidopsis thaliana] gi|15223490|ref|... 97 1e-19
ref|XP_468361.1| F-box family protein-like [Oryza sativa (japoni... 76 2e-13
ref|NP_973399.1| F-box family protein / SKP1 interacting partner... 71 7e-12
ref|XP_468355.1| F-box family protein-like [Oryza sativa (japoni... 70 1e-11
gb|AAC78516.1| putative phloem-specific lectin [Arabidopsis thal... 69 2e-11
dbj|BAB11208.1| phloem-specific lectin-like protein [Arabidopsis... 69 3e-11
gb|AAC78518.1| putative phloem-specific lectin [Arabidopsis thal... 65 4e-10
gb|AAC78508.1| putative phloem-specific lectin [Arabidopsis thal... 65 4e-10
gb|AAT69218.1| hypothetical protein At2g02320 [Arabidopsis thali... 64 6e-10
gb|AAC78514.1| putative phloem-specific lectin [Arabidopsis thal... 64 6e-10
gb|AAO11661.1| hypothetical protein [Arabidopsis thaliana] 63 1e-09
gb|AAK93595.1| unknown protein [Arabidopsis thaliana] gi|4831067... 62 3e-09
ref|NP_565229.1| expressed protein [Arabidopsis thaliana] 62 3e-09
gb|AAD55487.1| Hypothetical protein [Arabidopsis thaliana] gi|25... 62 3e-09
gb|AAK84134.1| nictaba [Nicotiana tabacum] 62 4e-09
gb|AAC78509.1| lectin-like protein [Arabidopsis thaliana] gi|152... 62 4e-09
>gb|AAM64609.1| phloem-specific lectin PP2-like protein [Arabidopsis thaliana]
Length = 288
Score = 104 bits (259), Expect = 5e-22
Identities = 64/141 (45%), Positives = 93/141 (65%), Gaps = 14/141 (9%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMAN---KVQNG-MAYLYNKYE-- 54
++T L+PNT Y YLI KV+ R YGLD PAE S+ + N K+++ ++ L NK +
Sbjct: 141 IQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQM 200
Query: 55 DTMFY-ENHRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFC----GEVDMEVKMSVM 109
+ +FY + ++M ++++ ++ R P RDDGWMEIELGEF G+ D EV MS+
Sbjct: 201 ERVFYGQREQRMATHEVVRSHR--REPEVRDDGWMEIELGEFETGSGEGDDDKEVVMSLT 258
Query: 110 EV-GYRLKGGLIVEGIEVRPK 129
EV GY+LKGG+ ++GIEVRPK
Sbjct: 259 EVKGYQLKGGIAIDGIEVRPK 279
>ref|NP_563837.1| SKP1 interacting partner 3-related [Arabidopsis thaliana]
Length = 289
Score = 104 bits (259), Expect = 5e-22
Identities = 64/141 (45%), Positives = 93/141 (65%), Gaps = 14/141 (9%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMAN---KVQNG-MAYLYNKYE-- 54
++T L+PNT Y YLI KV+ R YGLD PAE S+ + N K+++ ++ L NK +
Sbjct: 142 IQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQM 201
Query: 55 DTMFY-ENHRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFC----GEVDMEVKMSVM 109
+ +FY + ++M ++++ ++ R P RDDGWMEIELGEF G+ D EV MS+
Sbjct: 202 ERVFYGQREQRMATHEVVRSHR--REPEVRDDGWMEIELGEFETGSGEGDDDKEVVMSLT 259
Query: 110 EV-GYRLKGGLIVEGIEVRPK 129
EV GY+LKGG+ ++GIEVRPK
Sbjct: 260 EVKGYQLKGGIAIDGIEVRPK 280
>gb|AAC24090.1| Contains similarity to phloem-specific lectin PP2 gb|Z17331 from
Cucubita maxima. [Arabidopsis thaliana]
gi|25366264|pir||G86223 hypothetical protein [imported]
- Arabidopsis thaliana
Length = 288
Score = 104 bits (259), Expect = 5e-22
Identities = 64/141 (45%), Positives = 93/141 (65%), Gaps = 14/141 (9%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMAN---KVQNG-MAYLYNKYE-- 54
++T L+PNT Y YLI KV+ R YGLD PAE S+ + N K+++ ++ L NK +
Sbjct: 141 IQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQM 200
Query: 55 DTMFY-ENHRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFC----GEVDMEVKMSVM 109
+ +FY + ++M ++++ ++ R P RDDGWMEIELGEF G+ D EV MS+
Sbjct: 201 ERVFYGQREQRMATHEVVRSHR--REPEVRDDGWMEIELGEFETGSGEGDDDKEVVMSLT 258
Query: 110 EV-GYRLKGGLIVEGIEVRPK 129
EV GY+LKGG+ ++GIEVRPK
Sbjct: 259 EVKGYQLKGGIAIDGIEVRPK 279
>gb|AAU29482.1| At1g56240 [Arabidopsis thaliana] gi|15223489|ref|NP_176020.1| SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|45773796|gb|AAS76702.1| At1g56240 [Arabidopsis
thaliana] gi|12321750|gb|AAG50910.1| hypothetical
protein [Arabidopsis thaliana] gi|25366251|pir||A96604
hypothetical protein F14G9.15 [imported] - Arabidopsis
thaliana
Length = 284
Score = 99.8 bits (247), Expect = 1e-20
Identities = 63/145 (43%), Positives = 84/145 (57%), Gaps = 24/145 (16%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYE 60
++T +L+PNT Y YLI KV++ YGLD PAE SV K +NG NK +
Sbjct: 143 IQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSV----KSKNGQ---NNKNTTYLCCL 195
Query: 61 NHRKMERNKLMEDNKEIRV---------------PSKRDDGWMEIELGEFFCGE-VDMEV 104
+ +K + +L N+E R+ P RDDGW+EIELGEF E D EV
Sbjct: 196 DEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKARDDGWLEIELGEFVTREGEDDEV 255
Query: 105 KMSVMEV-GYRLKGGLIVEGIEVRP 128
MS+ EV GY+LKGG++++GIEVRP
Sbjct: 256 NMSLTEVKGYQLKGGIVIDGIEVRP 280
>gb|AAQ62432.1| At1g56250 [Arabidopsis thaliana] gi|15223490|ref|NP_176021.1| SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|12321747|gb|AAG50907.1| hypothetical protein
[Arabidopsis thaliana] gi|25366254|pir||B96604
hypothetical protein F14G9.14 [imported] - Arabidopsis
thaliana gi|51969496|dbj|BAD43440.1| hypothetical
protein [Arabidopsis thaliana]
Length = 282
Score = 96.7 bits (239), Expect = 1e-19
Identities = 62/140 (44%), Positives = 81/140 (57%), Gaps = 12/140 (8%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMAN-KVQNGMAYL-----YNKYE 54
++T +L+ NT Y YLI KV+ YGLD PAE S+ N ++ YL +
Sbjct: 143 IQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSKNGQISKSATYLCCLDEKKQQM 202
Query: 55 DTMFYENHRK---MERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGE-VDMEVKMSVME 110
+FY N + M + D K R P RDDGWMEIELGEF E D EV M++ E
Sbjct: 203 KRLFYGNREERMAMTVEAVGGDGKR-REPKCRDDGWMEIELGEFETREGEDDEVNMTLTE 261
Query: 111 V-GYRLKGGLIVEGIEVRPK 129
V GY+LKGG++++GIEVRPK
Sbjct: 262 VKGYQLKGGILIDGIEVRPK 281
>ref|XP_468361.1| F-box family protein-like [Oryza sativa (japonica cultivar-group)]
gi|51964510|ref|XP_507040.1| PREDICTED OSJNBa0053L11.25
gene product [Oryza sativa (japonica cultivar-group)]
gi|47848539|dbj|BAD22391.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
gi|47847859|dbj|BAD21652.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 297
Score = 76.3 bits (186), Expect = 2e-13
Identities = 50/143 (34%), Positives = 78/143 (53%), Gaps = 14/143 (9%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYN-KYEDTMFY 59
+ + +L+PN+TY Y++ K++ YGLD+ E SV++ + + + + ED
Sbjct: 152 IHSKMLSPNSTYAAYMVFKIADEFYGLDAPFQEASVSLGGRGSTKIVCVQSYDSEDEEVP 211
Query: 60 ENH-----------RKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGE-VDMEVKMS 107
EN+ R R++ + ++ + VP KR D WME+E+GEF E D EV S
Sbjct: 212 ENYWPMSIGPLLRRRARRRDRRLVLDEGVTVPQKRTDEWMELEMGEFINEEGEDGEVCFS 271
Query: 108 VMEV-GYRLKGGLIVEGIEVRPK 129
+ME G K GLIV+GIE+R K
Sbjct: 272 LMETKGGNWKRGLIVQGIEIRLK 294
>ref|NP_973399.1| F-box family protein / SKP1 interacting partner 3-related
[Arabidopsis thaliana]
Length = 320
Score = 70.9 bits (172), Expect = 7e-12
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 5 ILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENHRK 64
+L+P T Y Y++ K R GL P EV + + + ++ ++Y R+
Sbjct: 204 VLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQ-ESSKRFIY------FIGPRDRR 256
Query: 65 MERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGEVDMEVKMSVMEV-GYRLKGGLIVEG 123
R + +++ P +R+DGWME ELGEFF E E++ SV+E+ K GLI++G
Sbjct: 257 GRR-----ETRDVTKPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQG 311
Query: 124 IEVRP 128
IE RP
Sbjct: 312 IEFRP 316
>ref|XP_468355.1| F-box family protein-like [Oryza sativa (japonica cultivar-group)]
gi|47848533|dbj|BAD22385.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 479
Score = 69.7 bits (169), Expect = 1e-11
Identities = 44/126 (34%), Positives = 63/126 (49%), Gaps = 10/126 (7%)
Query: 5 ILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENHRK 64
+L+ NT Y YL+ +++ R YGLD E SV++ E K
Sbjct: 156 MLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGSTTT---------RQVGSVERRLK 206
Query: 65 MERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGE-VDMEVKMSVMEVGYRLKGGLIVEG 123
+ + ++I P KR DGWME++LGE + E D EV +S E K GL+V+G
Sbjct: 207 RRCSHALVLAEDIEHPQKRSDGWMELKLGELYNEEGDDGEVCISFRETEGHWKRGLVVQG 266
Query: 124 IEVRPK 129
IE+RPK
Sbjct: 267 IEIRPK 272
>gb|AAC78516.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226936|ref|NP_178339.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366261|pir||E84435 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 305
Score = 69.3 bits (168), Expect = 2e-11
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYE 60
+ + +++P T Y Y++ K + YG ++ EV V + + Y +++TM E
Sbjct: 177 INSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMD-E 235
Query: 61 NHRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFC-GEV--DMEVKMSVMEVGYR-LK 116
R+ +R K + P +R DGWMEI++GEFF G + D E++M +E R K
Sbjct: 236 QFRRRDRGK------NLVKPERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWK 289
Query: 117 GGLIVEGIEVRP 128
GLI++GIE+RP
Sbjct: 290 RGLIIQGIEIRP 301
>dbj|BAB11208.1| phloem-specific lectin-like protein [Arabidopsis thaliana]
gi|15238574|ref|NP_197844.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
Length = 251
Score = 68.6 bits (166), Expect = 3e-11
Identities = 47/131 (35%), Positives = 65/131 (48%), Gaps = 30/131 (22%)
Query: 3 THILTPNTTYVVYLITKVSHR-VYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYEN 61
T +L+ T Y YL+ K +G +S P EVS T Y N
Sbjct: 144 TSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSFRSTR---------------TEVYNN 188
Query: 62 HRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGEVDMEVKMSVMEV---GYRLKGG 118
R ++ E R+DGW+EIELGE++ G D E++MSV+E G+ KGG
Sbjct: 189 RRVFLKSGTQES---------REDGWLEIELGEYYVGFDDEEIEMSVLETREGGW--KGG 237
Query: 119 LIVEGIEVRPK 129
+IV+GIE+RPK
Sbjct: 238 IIVQGIEIRPK 248
>gb|AAC78518.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226939|ref|NP_178341.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366249|pir||G84435 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 272
Score = 65.1 bits (157), Expect = 4e-10
Identities = 44/130 (33%), Positives = 67/130 (50%), Gaps = 20/130 (15%)
Query: 3 THILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENH 62
T +L+P T Y Y++ K + YG + E +V + + + ++ E
Sbjct: 155 TRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVGQEPSRRLICFS--------EAI 206
Query: 63 RKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFF--CGEVDM-EVKMSVMEV-GYRLKGG 118
R+ RN + P +R+DGWMEIELGEFF G +D E++MS +E K G
Sbjct: 207 RRGRRNVVK--------PKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCG 258
Query: 119 LIVEGIEVRP 128
LI++GIE+RP
Sbjct: 259 LIIQGIEIRP 268
>gb|AAC78508.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226908|ref|NP_178331.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366259|pir||E84434 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 317
Score = 65.1 bits (157), Expect = 4e-10
Identities = 46/140 (32%), Positives = 73/140 (51%), Gaps = 15/140 (10%)
Query: 5 ILTPNTTYVVYLITKVSH-RVYGLDSAPAEVSVAMANKVQNGMA-YLYNKYEDTMFYENH 62
+L+ T Y VY++ K ++ R YG D P E V KV + Y + D+ +H
Sbjct: 175 MLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSH 234
Query: 63 RK--MERNKLMEDNKE----IRVPSKRDDGWMEIELGEFF-----CGEVDM-EVKMSVME 110
E + +E +E + P +R DGW E+ELG+F+ CG+ E+++S+ME
Sbjct: 235 YSGISEEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIME 294
Query: 111 V-GYRLKGGLIVEGIEVRPK 129
K GLI++GIE+RP+
Sbjct: 295 TQNGNWKSGLIIQGIEIRPE 314
>gb|AAT69218.1| hypothetical protein At2g02320 [Arabidopsis thaliana]
gi|3894165|gb|AAC78515.1| hypothetical protein
[Arabidopsis thaliana] gi|15226933|ref|NP_178338.1|
F-box family protein / SKP1 interacting partner
3-related [Arabidopsis thaliana] gi|25366257|pir||D84435
hypothetical protein At2g02320 [imported] - Arabidopsis
thaliana
Length = 307
Score = 64.3 bits (155), Expect = 6e-10
Identities = 44/130 (33%), Positives = 64/130 (48%), Gaps = 14/130 (10%)
Query: 3 THILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENH 62
T L+P T Y VY++ + YG E V M + Y + + M ++
Sbjct: 179 TRFLSPRTRYSVYIVFLKADICYGFAYVAMEAVVRMVGHELSESCRRYVCFHEAMEWQF- 237
Query: 63 RKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFF---CGEVDMEVKMSVMEVGYR-LKGG 118
+ R L+ P +R+DGWMEIE+GEFF + E++MSV E R K G
Sbjct: 238 --LTRKNLVN-------PERREDGWMEIEIGEFFNEGAFRNNDEIEMSVSETTQRNTKRG 288
Query: 119 LIVEGIEVRP 128
LI++GIE+RP
Sbjct: 289 LIIQGIEIRP 298
>gb|AAC78514.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226931|ref|NP_178337.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366256|pir||C84435 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 307
Score = 64.3 bits (155), Expect = 6e-10
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYE 60
M T IL+ T Y VY++ K+ +GL P +V V + +++ D
Sbjct: 184 MSTQILSLGTHYSVYIVYKIKDERHGLRDLPIQVGVGFKGQEMPKQFICFDESTDKT--- 240
Query: 61 NHRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGEVDM---EVKMSVMEV-GYRLK 116
++ + KLM+ K R DGWME E+G+FF M EV++S+++V LK
Sbjct: 241 --KEWPKKKLMKSKK-------RGDGWMEAEIGDFFNDGGLMGFDEVEVSIVDVTSPNLK 291
Query: 117 GGLIVEGIEVRPK 129
G+++EGIE RPK
Sbjct: 292 CGVMIEGIEFRPK 304
>gb|AAO11661.1| hypothetical protein [Arabidopsis thaliana]
Length = 307
Score = 63.2 bits (152), Expect = 1e-09
Identities = 44/130 (33%), Positives = 63/130 (47%), Gaps = 14/130 (10%)
Query: 3 THILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENH 62
T L+P T Y VY++ + YG E V M + Y + + M ++
Sbjct: 179 TRFLSPRTRYSVYIVFLKADICYGFAYVAMEAVVRMVGHELSESCRRYVCFHEAMEWQF- 237
Query: 63 RKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFF---CGEVDMEVKMSVMEVGYR-LKGG 118
+ R L+ P +R+DGWMEIE+GEFF + E++MSV E R K G
Sbjct: 238 --LTRKNLVN-------PERREDGWMEIEIGEFFNEGAFRNNDEIEMSVSETTQRNSKRG 288
Query: 119 LIVEGIEVRP 128
LI+ GIE+RP
Sbjct: 289 LIIRGIEIRP 298
>gb|AAK93595.1| unknown protein [Arabidopsis thaliana] gi|48310676|gb|AAT41865.1|
At1g80110 [Arabidopsis thaliana]
Length = 257
Score = 62.0 bits (149), Expect = 3e-09
Identities = 46/128 (35%), Positives = 66/128 (50%), Gaps = 20/128 (15%)
Query: 5 ILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENHRK 64
+L+ +T Y Y + K +H YG P E S+ +A DT +N +
Sbjct: 144 LLSDDTLYAAYFVFKWNHSPYGFRQ-PVETSLVLA---------------DTESTDNVVQ 187
Query: 65 MERNKLMEDN--KEIRVPSKRDDGWMEIELGEFFCGEVDM-EVKMSVMEV-GYRLKGGLI 120
LM+D+ +E + P R DGW E+ELG+FF D+ E++MS+ E G K GLI
Sbjct: 188 PSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPYEKKGLI 247
Query: 121 VEGIEVRP 128
V GIE+RP
Sbjct: 248 VYGIEIRP 255
>ref|NP_565229.1| expressed protein [Arabidopsis thaliana]
Length = 163
Score = 62.0 bits (149), Expect = 3e-09
Identities = 46/128 (35%), Positives = 66/128 (50%), Gaps = 20/128 (15%)
Query: 5 ILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENHRK 64
+L+ +T Y Y + K +H YG P E S+ +A DT +N +
Sbjct: 50 LLSDDTLYAAYFVFKWNHSPYGFRQ-PVETSLVLA---------------DTESTDNVVQ 93
Query: 65 MERNKLMEDN--KEIRVPSKRDDGWMEIELGEFFCGEVDM-EVKMSVMEV-GYRLKGGLI 120
LM+D+ +E + P R DGW E+ELG+FF D+ E++MS+ E G K GLI
Sbjct: 94 PSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPYEKKGLI 153
Query: 121 VEGIEVRP 128
V GIE+RP
Sbjct: 154 VYGIEIRP 161
>gb|AAD55487.1| Hypothetical protein [Arabidopsis thaliana] gi|25366266|pir||F96832
hypothetical protein F18B13.19 [imported] - Arabidopsis
thaliana
Length = 264
Score = 62.0 bits (149), Expect = 3e-09
Identities = 46/128 (35%), Positives = 66/128 (50%), Gaps = 20/128 (15%)
Query: 5 ILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYENHRK 64
+L+ +T Y Y + K +H YG P E S+ +A DT +N +
Sbjct: 151 LLSDDTLYAAYFVFKWNHSPYGFRQ-PVETSLVLA---------------DTESTDNVVQ 194
Query: 65 MERNKLMEDN--KEIRVPSKRDDGWMEIELGEFFCGEVDM-EVKMSVMEV-GYRLKGGLI 120
LM+D+ +E + P R DGW E+ELG+FF D+ E++MS+ E G K GLI
Sbjct: 195 PSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPYEKKGLI 254
Query: 121 VEGIEVRP 128
V GIE+RP
Sbjct: 255 VYGIEIRP 262
>gb|AAK84134.1| nictaba [Nicotiana tabacum]
Length = 165
Score = 61.6 bits (148), Expect = 4e-09
Identities = 47/131 (35%), Positives = 69/131 (51%), Gaps = 17/131 (12%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYE 60
+ T L T+Y VYL+ K++ L+ A A S+ N+V G E T +
Sbjct: 48 IETKNLIRKTSYAVYLVFKLTDNPRELERATA--SLRFVNEVAEGAGI-----EGTTVFI 100
Query: 61 NHRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFF--CGEVDMEVKMSVMEVGYRL-KG 117
+ +K +L R P R DGW+EI+LGEFF GE D EV+M +ME+ + K
Sbjct: 101 SKKKKLPGELG------RFPHLRSDGWLEIKLGEFFNNLGE-DGEVEMRLMEINDKTWKS 153
Query: 118 GLIVEGIEVRP 128
G+IV+G ++RP
Sbjct: 154 GIIVKGFDIRP 164
>gb|AAC78509.1| lectin-like protein [Arabidopsis thaliana]
gi|15226911|ref|NP_178332.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366262|pir||F84434 lectin-like protein [imported] -
Arabidopsis thaliana
Length = 305
Score = 61.6 bits (148), Expect = 4e-09
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 1 MRTHILTPNTTYVVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGMAYLYNKYEDTMFYE 60
M T L+P T Y Y++ K + L P E +V + + ++ ++Y +
Sbjct: 182 MNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVGLVGQ-ESSQRHIY--------FV 232
Query: 61 NHRKMERNKLMEDNKEIRVPSKRDDGWMEIELGEFFCGEVDMEVKMSVMEVGYRL-KGGL 119
R++ + +++ P+KR DGWME ELG+FF V S++E+ K GL
Sbjct: 233 GPSDQRRDR---ETRDVTRPTKRKDGWMEAELGQFFNESGCDVVDTSILEIKTPYWKRGL 289
Query: 120 IVEGIEVRP 128
I++GIE RP
Sbjct: 290 IIQGIEFRP 298
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,567,327
Number of Sequences: 2540612
Number of extensions: 7827810
Number of successful extensions: 19976
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 19860
Number of HSP's gapped (non-prelim): 85
length of query: 129
length of database: 863,360,394
effective HSP length: 105
effective length of query: 24
effective length of database: 596,596,134
effective search space: 14318307216
effective search space used: 14318307216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC147963.2