BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147961.1 - phase: 0
(46 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC23640.1| CER1-like protein [Arabidopsis thaliana] gi|74854... 48 8e-05
ref|NP_181306.2| CER1 protein, putative [Arabidopsis thaliana] 48 8e-05
dbj|BAA11024.1| possible aldehyde decarbonylase [Arabidopsis tha... 46 3e-04
emb|CAA65200.1| CER1-like [Arabidopsis thaliana] 46 3e-04
emb|CAA65199.1| CER1-like [Arabidopsis thaliana] 46 3e-04
ref|NP_973742.1| CER1 protein, putative [Arabidopsis thaliana] 46 3e-04
ref|NP_171721.3| CER1 protein, putative [Arabidopsis thaliana] 46 3e-04
ref|NP_171723.2| CER1 protein [Arabidopsis thaliana] 46 3e-04
ref|NP_850932.1| CER1 protein [Arabidopsis thaliana] gi|2317910|... 46 3e-04
gb|AAB87721.1| maize gl1 homolog [Arabidopsis thaliana] 46 3e-04
gb|AAP54228.1| putative CER1 [Oryza sativa (japonica cultivar-gr... 40 0.017
gb|AAD29719.1| CER1 [Oryza sativa] 40 0.017
ref|XP_468372.1| putative CER1 [Oryza sativa (japonica cultivar-... 39 0.050
ref|XP_466799.1| putative CER1 protein [Oryza sativa (japonica c... 36 0.25
emb|CAE03390.2| OSJNBa0004N05.14 [Oryza sativa (japonica cultiva... 35 0.42
>gb|AAC23640.1| CER1-like protein [Arabidopsis thaliana] gi|7485434|pir||T02536
CER1-like protein [imported] - Arabidopsis thaliana
Length = 635
Score = 47.8 bits (112), Expect = 8e-05
Identities = 19/29 (65%), Positives = 23/29 (78%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLIYSYIF 29
MAS+PG LT+WPW PLGSFK LL+ +F
Sbjct: 1 MASRPGFLTDWPWTPLGSFKYLLLAPLVF 29
>ref|NP_181306.2| CER1 protein, putative [Arabidopsis thaliana]
Length = 493
Score = 47.8 bits (112), Expect = 8e-05
Identities = 19/29 (65%), Positives = 23/29 (78%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLIYSYIF 29
MAS+PG LT+WPW PLGSFK LL+ +F
Sbjct: 1 MASRPGFLTDWPWTPLGSFKYLLLAPLVF 29
>dbj|BAA11024.1| possible aldehyde decarbonylase [Arabidopsis thaliana]
Length = 567
Score = 45.8 bits (107), Expect = 3e-04
Identities = 17/24 (70%), Positives = 22/24 (90%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MA+KPG+LT+WPW PLGSFK ++I
Sbjct: 1 MATKPGVLTDWPWTPLGSFKYIVI 24
>emb|CAA65200.1| CER1-like [Arabidopsis thaliana]
Length = 623
Score = 45.8 bits (107), Expect = 3e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MAS+PG LT WPW PLGSFK LL+
Sbjct: 1 MASRPGALTEWPWSPLGSFKYLLV 24
>emb|CAA65199.1| CER1-like [Arabidopsis thaliana]
Length = 622
Score = 45.8 bits (107), Expect = 3e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MAS+PG LT WPW PLGSFK LL+
Sbjct: 1 MASRPGALTEWPWSPLGSFKYLLV 24
>ref|NP_973742.1| CER1 protein, putative [Arabidopsis thaliana]
Length = 623
Score = 45.8 bits (107), Expect = 3e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MAS+PG LT WPW PLGSFK LL+
Sbjct: 1 MASRPGALTEWPWSPLGSFKYLLV 24
>ref|NP_171721.3| CER1 protein, putative [Arabidopsis thaliana]
Length = 627
Score = 45.8 bits (107), Expect = 3e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MAS+PG LT WPW PLGSFK LL+
Sbjct: 1 MASRPGALTEWPWSPLGSFKYLLV 24
>ref|NP_171723.2| CER1 protein [Arabidopsis thaliana]
Length = 625
Score = 45.8 bits (107), Expect = 3e-04
Identities = 17/24 (70%), Positives = 22/24 (90%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MA+KPG+LT+WPW PLGSFK ++I
Sbjct: 1 MATKPGVLTDWPWTPLGSFKYIVI 24
>ref|NP_850932.1| CER1 protein [Arabidopsis thaliana] gi|2317910|gb|AAC24374.1|
CER1 protein [Arabidopsis thaliana]
Length = 580
Score = 45.8 bits (107), Expect = 3e-04
Identities = 17/24 (70%), Positives = 22/24 (90%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MA+KPG+LT+WPW PLGSFK ++I
Sbjct: 1 MATKPGVLTDWPWTPLGSFKYIVI 24
>gb|AAB87721.1| maize gl1 homolog [Arabidopsis thaliana]
Length = 625
Score = 45.8 bits (107), Expect = 3e-04
Identities = 17/24 (70%), Positives = 22/24 (90%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MA+KPG+LT+WPW PLGSFK ++I
Sbjct: 1 MATKPGVLTDWPWTPLGSFKYIVI 24
>gb|AAP54228.1| putative CER1 [Oryza sativa (japonica cultivar-group)]
gi|37535278|ref|NP_921941.1| putative CER1 [Oryza
sativa (japonica cultivar-group)]
gi|10716610|gb|AAG21908.1| putative CER1 [Oryza sativa]
Length = 621
Score = 40.0 bits (92), Expect = 0.017
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLIYSYI 28
MA+ PG+ T WPW+ LGSFK +L+ ++
Sbjct: 1 MATNPGLFTEWPWKKLGSFKYVLLAPWV 28
>gb|AAD29719.1| CER1 [Oryza sativa]
Length = 621
Score = 40.0 bits (92), Expect = 0.017
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLIYSYI 28
MA+ PG+ T WPW+ LGSFK +L+ ++
Sbjct: 1 MATNPGLFTEWPWKKLGSFKYVLLAPWV 28
>ref|XP_468372.1| putative CER1 [Oryza sativa (japonica cultivar-group)]
gi|47848550|dbj|BAD22402.1| putative CER1 [Oryza sativa
(japonica cultivar-group)] gi|47847870|dbj|BAD21663.1|
putative CER1 [Oryza sativa (japonica cultivar-group)]
Length = 635
Score = 38.5 bits (88), Expect = 0.050
Identities = 15/24 (62%), Positives = 18/24 (74%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MASKPG LT WPW LG++K L+
Sbjct: 1 MASKPGPLTQWPWHNLGNYKYALV 24
>ref|XP_466799.1| putative CER1 protein [Oryza sativa (japonica cultivar-group)]
gi|47847803|dbj|BAD21579.1| putative CER1 protein
[Oryza sativa (japonica cultivar-group)]
gi|47847762|dbj|BAD21539.1| putative CER1 protein
[Oryza sativa (japonica cultivar-group)]
Length = 619
Score = 36.2 bits (82), Expect = 0.25
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MA++PG LT WPW LG+FK +++
Sbjct: 1 MATRPGPLTEWPWHRLGNFKYVVM 24
>emb|CAE03390.2| OSJNBa0004N05.14 [Oryza sativa (japonica cultivar-group)]
gi|50926406|ref|XP_473150.1| OSJNBa0004N05.14 [Oryza
sativa (japonica cultivar-group)]
Length = 597
Score = 35.4 bits (80), Expect = 0.42
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 1 MASKPGILTNWPWEPLGSFKVLLI 24
MA++PG LT WPW+ +G +K L++
Sbjct: 1 MATRPGPLTEWPWQWMGGYKYLVL 24
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.137 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,352,312
Number of Sequences: 2540612
Number of extensions: 1909507
Number of successful extensions: 3153
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3138
Number of HSP's gapped (non-prelim): 15
length of query: 46
length of database: 863,360,394
effective HSP length: 22
effective length of query: 24
effective length of database: 807,466,930
effective search space: 19379206320
effective search space used: 19379206320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)
Medicago: description of AC147961.1