BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147959.10 + phase: 1 /pseudo
(378 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL85069.1| unknown protein [Arabidopsis thaliana] gi|1502790... 197 4e-49
emb|CAC05458.1| putative protein [Arabidopsis thaliana] gi|15242... 191 4e-47
ref|NP_912410.1| unknown protein [Oryza sativa (japonica cultiva... 189 9e-47
gb|AAT77027.1| putative Vacuolar sorting protein (with alternati... 160 6e-38
gb|AAT77029.1| putative Vacuolar sorting protein (with alternati... 137 5e-31
gb|AAS07379.1| putative vacuolar sorting protein , 5'-partial [O... 105 3e-21
ref|XP_639976.1| hypothetical protein DDB0218662 [Dictyostelium ... 99 2e-19
ref|XP_415380.1| PREDICTED: similar to RIKEN cDNA 4432404J10 [Ga... 95 3e-18
gb|AAH13635.1| GAPVD1 protein [Homo sapiens] 95 4e-18
ref|XP_231161.3| PREDICTED: similar to RIKEN cDNA 4432404J10 [Ra... 95 4e-18
emb|CAH71014.1| GTPase activating protein and VPS9 domains 1 [Ho... 95 4e-18
emb|CAD38993.1| hypothetical protein [Homo sapiens] 95 4e-18
emb|CAB45770.1| hypothetical protein [Homo sapiens] gi|7512550|p... 95 4e-18
ref|NP_056450.2| GTPase activating protein and VPS9 domains 1 [H... 95 4e-18
emb|CAA20730.1| SPBC4F6.10 [Schizosaccharomyces pombe] gi|191129... 94 9e-18
gb|AAH60123.1| GTPase activating protein and VPS9 domains 1 [Mus... 93 1e-17
dbj|BAC98191.1| mKIAA1521 protein [Mus musculus] 93 1e-17
dbj|BAC40613.1| unnamed protein product [Mus musculus] 93 1e-17
gb|AAH57164.1| Gapvd1 protein [Mus musculus] gi|26380470|dbj|BAB... 93 1e-17
gb|AAH43715.1| Gapvd1 protein [Mus musculus] 93 1e-17
>gb|AAL85069.1| unknown protein [Arabidopsis thaliana] gi|15027907|gb|AAK76484.1|
unknown protein [Arabidopsis thaliana]
gi|18402362|ref|NP_566645.1| vacuolar sorting protein 9
domain-containing protein / VPS9 domain-containing
protein [Arabidopsis thaliana]
Length = 520
Score = 197 bits (501), Expect = 4e-49
Identities = 141/353 (39%), Positives = 192/353 (53%), Gaps = 28/353 (7%)
Query: 1 DGRRVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPEDAKID 60
D VQ+FF ME A R HPLW+ +EE++D A +GLEKY+MTKLF+R FA++ E+ D
Sbjct: 46 DCAMVQEFFSKMEAAFRAHPLWSGCSEEELDSAGDGLEKYVMTKLFTRVFASNTEEVIAD 105
Query: 61 HEISEKISLLQTFLKPEHLDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
++ +K+SL+Q F+ PE+LDI P NE+SWLLA+KELQKIN +KAP++KL I+NCC+V
Sbjct: 106 EKLFQKMSLVQQFISPENLDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCKV 165
Query: 121 INNLLLNA--AMSEYVPAGADDFIPVLIYVTIKAR------LALLVQTSNSLSCIEGK-- 170
INNLLLNA A +E P GAD+F+PVLIYVTIKA L +Q S + G+
Sbjct: 166 INNLLLNASIASNENAP-GADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESKLVGEAA 224
Query: 171 ---QNSSQKLSIISQI---LCQLRHL*LN*ILNPSQLMKSNLRSACKQPNW----PRKSQ 220
N S IS I L + ++ S L S Q P + +
Sbjct: 225 YFFTNILSAESFISNIDAKSISLDEAEFEKNMESARARISGLDSQTYQTGHGSAPPPRDE 284
Query: 221 VNYTLHVKLNKK*RTRAMFQTKCITNLILETK*TILGSLTKLSLKK*KIFEL*FQPLSQS 280
LN K R +FQ+K +L + + S T + K I +L + +
Sbjct: 285 STLQKTQSLNPK-RENTLFQSKSSDSLSGTNELLNINSETPMK-KAESISDL--ENKGAT 340
Query: 281 HLNYHAEFHVLQHGTNYPYMEAESKDLAMEDVDILLNHYKDLVAKYTIICKAI 333
L V Q YPY+ A + DL + DV+ LLN YK LV KY + K +
Sbjct: 341 LLKDTEPSKVFQ---EYPYIFASAGDLRIGDVEGLLNSYKQLVFKYVCLTKGL 390
>emb|CAC05458.1| putative protein [Arabidopsis thaliana]
gi|15242388|ref|NP_196494.1| vacuolar sorting protein 9
domain-containing protein / VPS9 domain-containing
protein [Arabidopsis thaliana]
Length = 712
Score = 191 bits (484), Expect = 4e-47
Identities = 140/386 (36%), Positives = 206/386 (53%), Gaps = 37/386 (9%)
Query: 5 VQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPEDAKIDHEIS 64
VQDFF ME A R HPLW+ +++++D A +GLEKY+MTKLF R FA++ ED D ++
Sbjct: 47 VQDFFYKMESAFRAHPLWSGCSDDELDNAGDGLEKYVMTKLFPRVFASNTEDVISDEKLF 106
Query: 65 EKISLLQTFLKPEHLDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRVINNL 124
+KISL+Q F+ PE+LDI P N+ SWLLA+KELQKIN + AP++KL I+ CC+VINNL
Sbjct: 107 QKISLVQQFISPENLDIQPTFQNQTSWLLAQKELQKINMYNAPRDKLMCILRCCKVINNL 166
Query: 125 LLNAAM-SEYVPAGADDFIPVLIYVTIKARLALLVQTSNSLSCIEGKQNSSQKLS----I 179
LLNA++ S GAD F+PVLIYVTIKA Q ++L I+ + S+ + +
Sbjct: 167 LLNASIASNQNEPGADQFLPVLIYVTIKANPP---QFHSNLLYIQRYRRQSKLVGEAGYL 223
Query: 180 ISQILCQ---LRHL*LN*ILNPSQLMKSNLRSACKQPNWPRKSQVNYTLHVKLNKK*RTR 236
+ IL + ++ + ++ ++SA + + P L T+
Sbjct: 224 FTNILSAESFISNIDAKSLSMDEADFETKMKSAHARLSGPGSQSYQTDHGAALPTAHNTK 283
Query: 237 AMFQTKCITNLILETK*TILGSLTKLSLKK*KIFEL*FQPLSQ-------SHLNYHAEFH 289
N++L TK T S T +L + I + P++ + LN +E
Sbjct: 284 R-------ENMLLHTKSTDSFSGTNETLSETPIKKA--DPITDLENKGAATLLNDRSE-- 332
Query: 290 VLQHGTNYPYMEAESKDLAMEDVDILLNHYKDLVAKYTIICKAINYLSMSEKEPLLHQLE 349
+ YPYM A DL + DV+ LLN+YK LV KY + K + + P + L
Sbjct: 333 ATKIFQEYPYMFASVGDLKIGDVEDLLNNYKQLVFKYVCLSKGLG--DATSLTPCISPL- 389
Query: 350 MQGEGSMLSECHGINTNTNDRTTSHE 375
+ S +SE H T ++D T E
Sbjct: 390 ---QASKVSENH--TTLSSDFQTKSE 410
>ref|NP_912410.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|29893599|gb|AAP06853.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 559
Score = 189 bits (481), Expect = 9e-47
Identities = 93/154 (60%), Positives = 121/154 (78%), Gaps = 1/154 (0%)
Query: 1 DGRRVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPEDAKID 60
D VQ+F +ME A R H WA ++EE+++ A EGLEKY+MTKLF+R FA+ PED K D
Sbjct: 138 DSAAVQEFLENMEGAFRAHTPWAGSSEEELESAGEGLEKYVMTKLFNRVFASVPEDVKSD 197
Query: 61 HEISEKISLLQTFLKPEHLDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
E+ EK+SLLQ F++PE+LDI P +E SWLLA+KELQKIN +KAP++KL+ I+NCC+V
Sbjct: 198 EELFEKMSLLQQFIRPENLDIKPEYQSETSWLLAQKELQKINMYKAPRDKLACILNCCKV 257
Query: 121 INNLLLNAA-MSEYVPAGADDFIPVLIYVTIKAR 153
INNLLLNA+ +S P GAD+F+PVLIYVTIK +
Sbjct: 258 INNLLLNASIVSNENPPGADEFLPVLIYVTIKKK 291
Score = 38.1 bits (87), Expect = 0.44
Identities = 17/37 (45%), Positives = 24/37 (63%)
Query: 297 YPYMEAESKDLAMEDVDILLNHYKDLVAKYTIICKAI 333
YP++ A S DL + DV+ LLN YK LV KY + + +
Sbjct: 441 YPFLFARSGDLTVADVENLLNSYKQLVLKYVALSQGM 477
>gb|AAT77027.1| putative Vacuolar sorting protein (with alternative splicing)
[Oryza sativa (japonica cultivar-group)]
Length = 218
Score = 160 bits (405), Expect = 6e-38
Identities = 79/112 (70%), Positives = 95/112 (84%), Gaps = 1/112 (0%)
Query: 42 MTKLFSRTFAASPEDAKIDHEISEKISLLQTFLKPEHLDIPPVLHNEASWLLAEKELQKI 101
MTKLF R FA+S ED K D EISEKI LLQ F++P HLDIP +LHNEA+WLLA KELQKI
Sbjct: 1 MTKLFDRAFASSAEDVKSDMEISEKIGLLQHFVRPHHLDIPKLLHNEAAWLLAVKELQKI 60
Query: 102 NAFKAPQEKLSTIMNCCRVINNLLLNAAMS-EYVPAGADDFIPVLIYVTIKA 152
N+FK+P+EKLS IM+CC+VINNLLLN +MS + +GADDF+P+LIY+TIKA
Sbjct: 61 NSFKSPREKLSCIMSCCQVINNLLLNVSMSNDRTLSGADDFLPILIYITIKA 112
>gb|AAT77029.1| putative Vacuolar sorting protein (with alternative splicing)
[Oryza sativa (japonica cultivar-group)]
Length = 145
Score = 137 bits (345), Expect = 5e-31
Identities = 65/96 (67%), Positives = 77/96 (79%)
Query: 1 DGRRVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPEDAKID 60
DG RVQ FF ME AIR+HPLWA AT ++ID A+EGLEKYIMTKLF R FA+S ED K D
Sbjct: 50 DGGRVQTFFAEMETAIRDHPLWANATNQEIDNALEGLEKYIMTKLFDRAFASSAEDVKSD 109
Query: 61 HEISEKISLLQTFLKPEHLDIPPVLHNEASWLLAEK 96
EISEKI LLQ F++P HLDIP +LHNEA+WL+ ++
Sbjct: 110 MEISEKIGLLQHFVRPHHLDIPKLLHNEAAWLVRQQ 145
>gb|AAS07379.1| putative vacuolar sorting protein , 5'-partial [Oryza sativa
(japonica cultivar-group)]
Length = 177
Score = 105 bits (261), Expect = 3e-21
Identities = 50/70 (71%), Positives = 63/70 (89%), Gaps = 1/70 (1%)
Query: 84 VLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRVINNLLLNAAMS-EYVPAGADDFI 142
+LHNEA+WLLA KELQKIN+FK+P+EKLS IM+CC+VINNLLLN +MS + +GADDF+
Sbjct: 2 LLHNEAAWLLAVKELQKINSFKSPREKLSCIMSCCQVINNLLLNVSMSNDRTLSGADDFL 61
Query: 143 PVLIYVTIKA 152
P+LIY+TIKA
Sbjct: 62 PILIYITIKA 71
>ref|XP_639976.1| hypothetical protein DDB0218662 [Dictyostelium discoideum]
gi|60466956|gb|EAL65000.1| hypothetical protein
DDB0218662 [Dictyostelium discoideum]
Length = 726
Score = 99.0 bits (245), Expect = 2e-19
Identities = 65/211 (30%), Positives = 111/211 (51%), Gaps = 34/211 (16%)
Query: 2 GRRVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAAS-------- 53
G + + +E + + PLWA A E +++ +G+EKYIM KL+ TF +
Sbjct: 183 GHTIITYTRELEHWVLSLPLWANAGEAEVEGIRDGIEKYIMGKLYHCTFPPARLGGLELT 242
Query: 54 -------------PEDAKIDHEISEKISLLQTFLKPEHLDIPPVLH-NEASWLLAEKELQ 99
ED K+ I+ + FL+P+HLDI ++ NE LA EL+
Sbjct: 243 EGNIVSEGSLIPTEEDLKLFKHIT-----IHGFLEPQHLDIQQFINSNEQRQNLAISELR 297
Query: 100 KINAFKAPQEKLSTIMNCCRVINNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQ 159
KIN +K P++K+ + NCC+VI LL + P+GAD+F+P+LIYV +K+ +L
Sbjct: 298 KINTYKTPRDKMVCVYNCCKVIFK-LLKSVNPNGNPSGADEFLPILIYVVLKSNPIML-- 354
Query: 160 TSNSLSCIEGKQNSSQKLSIISQILCQLRHL 190
++++ + ++ S+ ++++I C HL
Sbjct: 355 -KSNITYVNTFRDQSR---MMTEIACYFTHL 381
>ref|XP_415380.1| PREDICTED: similar to RIKEN cDNA 4432404J10 [Gallus gallus]
Length = 1607
Score = 95.1 bits (235), Expect = 3e-18
Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + A+ +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 1413 QVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 1472
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 1473 LHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 1532
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQTSNSLS-----CIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T +S C+ G+++
Sbjct: 1533 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEES 1587
>gb|AAH13635.1| GAPVD1 protein [Homo sapiens]
Length = 549
Score = 94.7 bits (234), Expect = 4e-18
Identities = 60/177 (33%), Positives = 95/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + A+ +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 355 QVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 414
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 415 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 474
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 475 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 529
>ref|XP_231161.3| PREDICTED: similar to RIKEN cDNA 4432404J10 [Rattus norvegicus]
Length = 1532
Score = 94.7 bits (234), Expect = 4e-18
Identities = 60/177 (33%), Positives = 95/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + A+ +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 1338 QVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 1397
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 1398 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 1457
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 1458 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 1512
>emb|CAH71014.1| GTPase activating protein and VPS9 domains 1 [Homo sapiens]
gi|20521930|dbj|BAA96045.2| KIAA1521 protein [Homo
sapiens]
Length = 1272
Score = 94.7 bits (234), Expect = 4e-18
Identities = 60/177 (33%), Positives = 95/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + A+ +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 1078 QVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 1137
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 1138 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 1197
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 1198 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 1252
>emb|CAD38993.1| hypothetical protein [Homo sapiens]
Length = 329
Score = 94.7 bits (234), Expect = 4e-18
Identities = 60/177 (33%), Positives = 95/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + A+ +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 135 QVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 194
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 195 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 254
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 255 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 309
>emb|CAB45770.1| hypothetical protein [Homo sapiens] gi|7512550|pir||T12506
hypothetical protein DKFZp434C212.1 - human (fragment)
Length = 813
Score = 94.7 bits (234), Expect = 4e-18
Identities = 60/177 (33%), Positives = 95/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + A+ +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 619 QVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 678
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 679 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 738
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 739 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 793
>ref|NP_056450.2| GTPase activating protein and VPS9 domains 1 [Homo sapiens]
Length = 1487
Score = 94.7 bits (234), Expect = 4e-18
Identities = 60/177 (33%), Positives = 95/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + A+ +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 1293 QVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 1352
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 1353 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 1412
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 1413 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 1467
>emb|CAA20730.1| SPBC4F6.10 [Schizosaccharomyces pombe] gi|19112902|ref|NP_596110.1|
hypothetical protein SPBC4F6.10 [Schizosaccharomyces
pombe 972h-] gi|7493160|pir||T40507 probable vacuolar
protein sorting-associated pro tein - fission yeast
(Schizosaccharomyces pombe)
Length = 537
Score = 93.6 bits (231), Expect = 9e-18
Identities = 54/166 (32%), Positives = 93/166 (55%), Gaps = 17/166 (10%)
Query: 5 VQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAAS----------- 53
++DF + I + WA+ ++ +ID A EG+EK ++ +L++ F+
Sbjct: 155 IRDFLKFINEKIEQYEPWASGSQAEIDNAKEGMEKLVLNRLYTSLFSPEIAKSGIPLSSE 214
Query: 54 -PEDAKIDHEISEKISLLQTFLKPEHLDIPPVLHNEASWLLAEKELQKINAFKAPQEKLS 112
+D + D +SEK+ L Q ++ E+LDI + + LA EL++IN + AP++K+
Sbjct: 215 HSDDVEEDRVLSEKMELFQ-WITEENLDIKKQKSSSKFFKLAADELRRINDYHAPRDKII 273
Query: 113 TIMNCCRVINNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLV 158
++NCC+VI + L N E AD F+P+LI+V ++AR A LV
Sbjct: 274 CLLNCCKVIFSYLRNVVKEE----SADMFVPILIFVVLQARPAHLV 315
>gb|AAH60123.1| GTPase activating protein and VPS9 domains 1 [Mus musculus]
gi|40254514|ref|NP_079985.2| GTPase activating protein
and VPS9 domains 1 [Mus musculus]
Length = 1437
Score = 93.2 bits (230), Expect = 1e-17
Identities = 59/177 (33%), Positives = 94/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + + +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 1243 QVEDFLQFLYGVMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 1302
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 1303 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 1362
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 1363 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 1417
>dbj|BAC98191.1| mKIAA1521 protein [Mus musculus]
Length = 1275
Score = 93.2 bits (230), Expect = 1e-17
Identities = 59/177 (33%), Positives = 94/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + + +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 1081 QVEDFLQFLYGVMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 1140
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 1141 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 1200
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 1201 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 1255
>dbj|BAC40613.1| unnamed protein product [Mus musculus]
Length = 485
Score = 93.2 bits (230), Expect = 1e-17
Identities = 59/177 (33%), Positives = 94/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + + +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 291 QVEDFLQFLYGVMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 350
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 351 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 410
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 411 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 465
>gb|AAH57164.1| Gapvd1 protein [Mus musculus] gi|26380470|dbj|BAB29377.2| unnamed
protein product [Mus musculus]
Length = 575
Score = 93.2 bits (230), Expect = 1e-17
Identities = 59/177 (33%), Positives = 94/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + + +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 381 QVEDFLQFLYGVMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 440
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 441 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 500
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 501 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 555
>gb|AAH43715.1| Gapvd1 protein [Mus musculus]
Length = 285
Score = 93.2 bits (230), Expect = 1e-17
Identities = 59/177 (33%), Positives = 94/177 (52%), Gaps = 10/177 (5%)
Query: 4 RVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPE-DAKIDHE 62
+V+DF + + +W A+EE + A +E+ +M ++F F + + D D
Sbjct: 91 QVEDFLQFLYGVMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQV 150
Query: 63 ISEKISLLQTFLKPEH--LDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
+ E I L + H L IP V EA W A+ E++ I+A+K P++K+ I+ C
Sbjct: 151 LHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCST 210
Query: 121 INNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLALLVQT-----SNSLSCIEGKQN 172
I N LL+ A + VP GADDF+PVL++V IKA L+ T S SC+ G+++
Sbjct: 211 IMN-LLSLANEDSVP-GADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES 265
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.328 0.139 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 564,466,729
Number of Sequences: 2540612
Number of extensions: 20862694
Number of successful extensions: 59343
Number of sequences better than 10.0: 149
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 59120
Number of HSP's gapped (non-prelim): 168
length of query: 378
length of database: 863,360,394
effective HSP length: 130
effective length of query: 248
effective length of database: 533,080,834
effective search space: 132204046832
effective search space used: 132204046832
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 76 (33.9 bits)
Medicago: description of AC147959.10