BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147712.6 + phase: 0
(80 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM62973.1| unknown [Arabidopsis thaliana] 67 1e-10
ref|NP_564681.1| zinc finger (C3HC4-type RING finger) family pro... 67 2e-10
gb|AAP55056.1| unknown protein [Oryza sativa (japonica cultivar-... 63 2e-09
gb|AAG51572.1| unknown protein; 71207-66119 [Arabidopsis thalian... 62 3e-09
gb|AAQ56803.1| At2g44950 [Arabidopsis thaliana] gi|19698951|gb|A... 41 0.007
gb|AAM14834.1| unknown protein [Arabidopsis thaliana] gi|4895255... 41 0.007
ref|NP_980900.1| DNA recombinase, putative [Bacillus cereus ATCC... 40 0.020
emb|CAD41603.3| OSJNBb0034G17.7 [Oryza sativa (japonica cultivar... 37 0.13
ref|XP_652749.1| hypothetical protein 106.t00013 [Entamoeba hist... 37 0.17
emb|CAG58365.1| unnamed protein product [Candida glabrata CBS138... 36 0.22
ref|NP_702359.1| hypothetical protein PF14_0470 [Plasmodium falc... 36 0.29
ref|NP_001019349.1| protocadherin 2 gamma 5 [Danio rerio] gi|515... 36 0.29
gb|AAQ97841.1| ribosome binding protein 1 homolog 180kDa [Danio ... 35 0.38
ref|XP_653005.1| hypothetical protein 97.t00004 [Entamoeba histo... 35 0.38
ref|XP_538401.1| PREDICTED: similar to myosin, heavy polypeptide... 35 0.49
ref|NP_391360.1| hypothetical protein BSU34800 [Bacillus subtili... 35 0.49
ref|XP_612582.1| PREDICTED: similar to myosin, heavy polypeptide... 35 0.49
ref|XP_587370.1| PREDICTED: similar to myosin, heavy polypeptide... 35 0.49
ref|NP_701067.1| hypothetical protein PF11_0207 [Plasmodium falc... 34 0.84
ref|XP_651214.1| hypothetical protein 177.t00008 [Entamoeba hist... 34 0.84
>gb|AAM62973.1| unknown [Arabidopsis thaliana]
Length = 365
Score = 67.0 bits (162), Expect = 1e-10
Identities = 32/63 (50%), Positives = 47/63 (73%), Gaps = 2/63 (3%)
Query: 10 DLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIRVCKNMIKCTVFSDRP 69
+LD +R +KKLEEELM +N ++ EL+SE+ E + +L +EE++ CKN++KC V DRP
Sbjct: 263 ELDDERREKKKLEEELMELNKELEELDSESVEAAIVRL--QEEVKNCKNILKCGVCFDRP 320
Query: 70 KEV 72
KEV
Sbjct: 321 KEV 323
>ref|NP_564681.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
Length = 383
Score = 66.6 bits (161), Expect = 2e-10
Identities = 32/63 (50%), Positives = 46/63 (72%), Gaps = 2/63 (3%)
Query: 10 DLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIRVCKNMIKCTVFSDRP 69
+LD +R +KKLEEELM +N ++ EL SE+ E + +L +EE++ CKN++KC V DRP
Sbjct: 281 ELDDERREKKKLEEELMELNKELEELGSESVEAAIVRL--QEEVKNCKNILKCGVCFDRP 338
Query: 70 KEV 72
KEV
Sbjct: 339 KEV 341
>gb|AAP55056.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|37536934|ref|NP_922769.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|18855010|gb|AAL79702.1| unknown protein [Oryza
sativa]
Length = 789
Score = 63.2 bits (152), Expect = 2e-09
Identities = 31/63 (49%), Positives = 46/63 (72%), Gaps = 2/63 (3%)
Query: 10 DLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIRVCKNMIKCTVFSDRP 69
+L+ +R+ + KLEEE V N+++EL SET ET +Q+L ++EI+ CK ++KC V DRP
Sbjct: 687 ELERERNERIKLEEEYEEVKNEVSELTSETEETTIQKL--QDEIKECKAILKCGVCFDRP 744
Query: 70 KEV 72
KEV
Sbjct: 745 KEV 747
>gb|AAG51572.1| unknown protein; 71207-66119 [Arabidopsis thaliana]
gi|25405809|pir||D96594 unknown protein, 71207-66119
[imported] - Arabidopsis thaliana
Length = 899
Score = 62.4 bits (150), Expect = 3e-09
Identities = 32/63 (50%), Positives = 46/63 (72%), Gaps = 3/63 (4%)
Query: 10 DLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIRVCKNMIKCTVFSDRP 69
+LD +R +KKLEEELM +N ++ EL SE+ E + +L +EE++ CKN++KC V DRP
Sbjct: 798 ELDDERE-KKKLEEELMELNKELEELGSESVEAAIVRL--QEEVKNCKNILKCGVCFDRP 854
Query: 70 KEV 72
KEV
Sbjct: 855 KEV 857
>gb|AAQ56803.1| At2g44950 [Arabidopsis thaliana] gi|19698951|gb|AAL91211.1| unknown
protein [Arabidopsis thaliana]
gi|30689877|ref|NP_182022.2| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
Length = 878
Score = 41.2 bits (95), Expect = 0.007
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 6 ASEKDLDSKRSSQKKLEEELMNVNNQIAELNSET-GETVVQQLEEEEEIRVCKNMIKCTV 64
A E +L+ +R +++++EEE+ +++ L S G + +Q+L +E + K ++KC
Sbjct: 771 ALELELEIERFNRRRIEEEMEIAKKKVSRLRSLIEGSSAIQKLRQE--LSEFKEILKCKA 828
Query: 65 FSDRPKEV 72
+DRPKEV
Sbjct: 829 CNDRPKEV 836
>gb|AAM14834.1| unknown protein [Arabidopsis thaliana] gi|4895255|gb|AAD32840.1|
unknown protein [Arabidopsis thaliana]
gi|7486945|pir||T00398 hypothetical protein At2g44950
[imported] - Arabidopsis thaliana
Length = 518
Score = 41.2 bits (95), Expect = 0.007
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 6 ASEKDLDSKRSSQKKLEEELMNVNNQIAELNSET-GETVVQQLEEEEEIRVCKNMIKCTV 64
A E +L+ +R +++++EEE+ +++ L S G + +Q+L +E + K ++KC
Sbjct: 411 ALELELEIERFNRRRIEEEMEIAKKKVSRLRSLIEGSSAIQKLRQE--LSEFKEILKCKA 468
Query: 65 FSDRPKEV 72
+DRPKEV
Sbjct: 469 CNDRPKEV 476
>ref|NP_980900.1| DNA recombinase, putative [Bacillus cereus ATCC 10987]
gi|42739582|gb|AAS43508.1| DNA recombinase, putative
[Bacillus cereus ATCC 10987]
Length = 526
Score = 39.7 bits (91), Expect = 0.020
Identities = 25/81 (30%), Positives = 39/81 (47%), Gaps = 8/81 (9%)
Query: 1 MSVASASEKDLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIRVCK--- 57
+S+ +K+L RS+ +KLE E + +N QI ELN E Q++ +EE + K
Sbjct: 381 LSIEKRLKKELSDLRSANRKLETEAIELNQQIEELNREIKLHYEQEIIQEEVLEFMKILM 440
Query: 58 -----NMIKCTVFSDRPKEVK 73
M + V D E+K
Sbjct: 441 SHRSNKMHELNVIKDNQDELK 461
>emb|CAD41603.3| OSJNBb0034G17.7 [Oryza sativa (japonica cultivar-group)]
gi|50927651|ref|XP_473416.1| OSJNBb0034G17.7 [Oryza
sativa (japonica cultivar-group)]
Length = 883
Score = 37.0 bits (84), Expect = 0.13
Identities = 17/63 (26%), Positives = 40/63 (62%), Gaps = 1/63 (1%)
Query: 10 DLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIRVCKNMIKCTVFSDRP 69
+L+ +R S+K++E++L ++ + + L ++ E+ V + + E++ + ++KC + DR
Sbjct: 780 ELEKERFSKKRIEDDLEVMSRKASSLRAKARESAVLE-KLRHEVKEYRGILKCGICHDRQ 838
Query: 70 KEV 72
KEV
Sbjct: 839 KEV 841
>ref|XP_652749.1| hypothetical protein 106.t00013 [Entamoeba histolytica HM-1:IMSS]
gi|56469633|gb|EAL47363.1| hypothetical protein
106.t00013 [Entamoeba histolytica HM-1:IMSS]
Length = 146
Score = 36.6 bits (83), Expect = 0.17
Identities = 22/74 (29%), Positives = 44/74 (58%), Gaps = 8/74 (10%)
Query: 8 EKDLDSKRSS--QKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEI-----RVCKNMI 60
+K++++K ++K +EE++ + NQI EL + E ++++EEE+ I R K ++
Sbjct: 21 QKEIENKEEKIEEEKEKEEILALQNQITELKEKLKELSMKRMEEEQAISEEMMRKAKEIV 80
Query: 61 KCTVFSDRPKEVKT 74
+ F + KE+KT
Sbjct: 81 R-KEFEEEIKEMKT 93
>emb|CAG58365.1| unnamed protein product [Candida glabrata CBS138]
gi|50286051|ref|XP_445454.1| unnamed protein product
[Candida glabrata]
Length = 1980
Score = 36.2 bits (82), Expect = 0.22
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 2 SVASASEKDLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIRVCKNMIK 61
++ S +K+++ ++ LE EL + +I + N + E + E+E+EI+V KN +K
Sbjct: 1475 TIKSEYDKEINILEDKKEVLESELSDKKQEIIDYNQKIKEQETKATEKEKEIQVAKNALK 1534
>ref|NP_702359.1| hypothetical protein PF14_0470 [Plasmodium falciparum 3D7]
gi|23497542|gb|AAN37083.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 1288
Score = 35.8 bits (81), Expect = 0.29
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 8 EKDLDSKRSSQKKLEEELMNVNNQ---IAELNSETGETVVQQLEEEEEIRVCKNMIKCT 63
EK+ + +++ +KK +E+ N N+ I+ N +T + V+ Q EE+EE C + K T
Sbjct: 452 EKNDEEEKNDEKKKNDEMNNKQNRQENISINNIQTSDAVLVQKEEKEEFSECNQLFKNT 510
>ref|NP_001019349.1| protocadherin 2 gamma 5 [Danio rerio] gi|51557473|gb|AAU06422.1|
protocadherin cluster 2 gamma 5 [Danio rerio]
Length = 935
Score = 35.8 bits (81), Expect = 0.29
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 6 ASEKDLDSKRSSQKKLEEELMNVNNQIAELNSETGE-TVVQQLEEEEEIRVCKNMIKCTV 64
A + LD K+ S +K + N Q E+N TGE TV ++++ EE +C+N C +
Sbjct: 36 AKDLGLDVKKLSSRKARIDTDNNRIQYCEINLNTGELTVAERIDREE---ICENKASCVI 92
>gb|AAQ97841.1| ribosome binding protein 1 homolog 180kDa [Danio rerio]
gi|40786519|ref|NP_955463.1| ribosome binding protein 1
homolog (dog) [Danio rerio]
Length = 978
Score = 35.4 bits (80), Expect = 0.38
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 2 SVASASEKDLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIRVCKNMIK 61
+V + ++++ RSS K+ EE+L ++ ++ +L E ETV + EE + RV + +
Sbjct: 539 TVQKINSEEVEQLRSSLKEREEQLTSMEAELTQLREEL-ETVKRAQAEETQNRVNEADTR 597
Query: 62 CTVFSDRPKEVKT 74
C ++ +++KT
Sbjct: 598 CREYTTEIQQLKT 610
>ref|XP_653005.1| hypothetical protein 97.t00004 [Entamoeba histolytica HM-1:IMSS]
gi|56469917|gb|EAL47619.1| hypothetical protein
97.t00004 [Entamoeba histolytica HM-1:IMSS]
Length = 143
Score = 35.4 bits (80), Expect = 0.38
Identities = 14/45 (31%), Positives = 31/45 (68%)
Query: 9 KDLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEI 53
K++++ + ++K +EE++ + NQI EL + E ++++EEE+ I
Sbjct: 48 KEIENDKEEEQKDKEEILALKNQITELKEKVKEFSMKRMEEEQAI 92
>ref|XP_538401.1| PREDICTED: similar to myosin, heavy polypeptide 9, non-muscle [Canis
familiaris]
Length = 2679
Score = 35.0 bits (79), Expect = 0.49
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 8 EKDLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIR 54
EK +++KLE + ++N+QIAEL ++ E +Q ++EEE++
Sbjct: 1759 EKQRQELEKTRRKLEGDSTDLNDQIAELQAQIAELKMQLAKKEEELQ 1805
>ref|NP_391360.1| hypothetical protein BSU34800 [Bacillus subtilis subsp. subtilis
str. 168] gi|2635993|emb|CAB15485.1| yvcE [Bacillus
subtilis subsp. subtilis str. 168]
gi|1945646|emb|CAB08053.1| hypothetical protein
[Bacillus subtilis] gi|7474490|pir||F70031 cell
wall-binding protein homolog yvcE - Bacillus subtilis
gi|7531281|sp|P40767|YVCE_BACSU Hypothetical protein
yvcE (PSPA2)
Length = 473
Score = 35.0 bits (79), Expect = 0.49
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 2 SVASASEKDLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIRVCKNMIK 61
S A EK+L + +Q K+E+EL ++N++ + +++ + + + +EEI+ K IK
Sbjct: 49 SSIEAKEKELTELQENQSKIEKELKDINDKALDTSNKIEDKKEENDKTKEEIKKLKKEIK 108
Query: 62 CT 63
T
Sbjct: 109 ET 110
>ref|XP_612582.1| PREDICTED: similar to myosin, heavy polypeptide 9, non-muscle,
partial [Bos taurus]
Length = 1278
Score = 35.0 bits (79), Expect = 0.49
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 8 EKDLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIR 54
EK +++KLE + ++N+QIAEL ++ E +Q ++EEE++
Sbjct: 631 EKQRQELEKTRRKLEGDSTDLNDQIAELQAQIAELKMQLAKKEEELQ 677
>ref|XP_587370.1| PREDICTED: similar to myosin, heavy polypeptide 9, non-muscle,
partial [Bos taurus]
Length = 1261
Score = 35.0 bits (79), Expect = 0.49
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 8 EKDLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEEEEIR 54
EK +++KLE + ++N+QIAEL ++ E +Q ++EEE++
Sbjct: 631 EKQRQELEKTRRKLEGDSTDLNDQIAELQAQIAELKMQLAKKEEELQ 677
>ref|NP_701067.1| hypothetical protein PF11_0207 [Plasmodium falciparum 3D7]
gi|23496130|gb|AAN35791.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 964
Score = 34.3 bits (77), Expect = 0.84
Identities = 20/73 (27%), Positives = 38/73 (51%), Gaps = 2/73 (2%)
Query: 3 VASASEKDLDSKRSSQKKLEEELMNVNNQIAELNSETGETVVQQLEEE--EEIRVCKNMI 60
+ E+ + + K+++EE+ V +I E E E + ++++EE EEI+ K +
Sbjct: 610 IKEVKEEIKEEVKEEIKEVKEEIKEVKEEIKEEIKEVKEEIKEEVKEEIKEEIKEIKEEL 669
Query: 61 KCTVFSDRPKEVK 73
K + S+ KE K
Sbjct: 670 KNDISSETTKEEK 682
>ref|XP_651214.1| hypothetical protein 177.t00008 [Entamoeba histolytica HM-1:IMSS]
gi|56467920|gb|EAL45828.1| hypothetical protein
177.t00008 [Entamoeba histolytica HM-1:IMSS]
Length = 157
Score = 34.3 bits (77), Expect = 0.84
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 8 EKDLDSKRSS--QKKLEEELMNVNNQIAELNSETGETVVQQLEE-----EEEIRVCKNMI 60
++++++K ++K +EE++ + NQI EL + E ++++EE EE +R K ++
Sbjct: 21 QEEIENKEEKIEEEKDKEEIIALKNQITELKEKVKEFSMEKMEEDQAISEEMMRKAKEIV 80
Query: 61 KCTVFSDRPKEVKT 74
+ F + KE+KT
Sbjct: 81 R-KEFEEEIKEMKT 93
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.304 0.122 0.303
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,980,023
Number of Sequences: 2540612
Number of extensions: 3749879
Number of successful extensions: 25924
Number of sequences better than 10.0: 222
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 25563
Number of HSP's gapped (non-prelim): 465
length of query: 80
length of database: 863,360,394
effective HSP length: 56
effective length of query: 24
effective length of database: 721,086,122
effective search space: 17306066928
effective search space used: 17306066928
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC147712.6