BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147538.7 - phase: 0 /pseudo
(113 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE05519.1| OSJNBa0038P21.12 [Oryza sativa (japonica cultiva... 46 2e-04
gb|AAF78897.1| phragmoplast-associated kinesin-related protein 1... 46 2e-04
gb|AAN16471.1| phragmoplast-associated kinesin-related protein 1... 45 3e-04
dbj|BAB02786.1| kinesin-like protein [Arabidopsis thaliana] 45 3e-04
emb|CAB10194.1| kinesin like protein [Arabidopsis thaliana] gi|7... 45 5e-04
gb|AAF78894.1| phragmoplast-associated kinesin-related protein 1... 45 5e-04
ref|XP_465748.1| putative phragmoplast-associated kinesin-relate... 44 0.001
gb|AAV35794.1| kinesin heavy chain, putative [Oryza sativa (japo... 41 0.006
gb|AAK91821.1| kinesin heavy chain [Zea mays] 41 0.006
dbj|BAB01875.1| unnamed protein product [Arabidopsis thaliana] 39 0.030
ref|NP_188650.2| kinesin motor family protein [Arabidopsis thali... 39 0.030
ref|NP_705244.1| hypothetical protein [Plasmodium falciparum 3D7... 38 0.067
gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis] 38 0.067
ref|XP_635998.1| hypothetical protein DDB0188660 [Dictyostelium ... 37 0.11
gb|AAW42674.1| hypothetical protein CNC05970 [Cryptococcus neofo... 35 0.33
ref|XP_593648.1| PREDICTED: similar to putative NFkB activating ... 35 0.43
ref|XP_646505.1| hypothetical protein DDB0216735 [Dictyostelium ... 35 0.43
emb|CAH79498.1| u5 small nuclear ribonucleoprotein-specific prot... 35 0.57
emb|CAD01138.1| conserved hypothetical protein [Neurospora crassa] 34 0.74
gb|AAU44601.1| hypothetical protein AT5G55520 [Arabidopsis thali... 34 0.74
>emb|CAE05519.1| OSJNBa0038P21.12 [Oryza sativa (japonica cultivar-group)]
Length = 1094
Score = 45.8 bits (107), Expect = 2e-04
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 4 SGGHSAAW-VRKSLNILQFSLNRPSSLCCVDED-GDEEMEIDEEDVE 48
+G S W R+SL++L+ SL+RP++ + ED GD EMEIDE DVE
Sbjct: 461 NGSFSTGWNARRSLHLLKMSLSRPTTFQTIHEDSGDVEMEIDENDVE 507
>gb|AAF78897.1| phragmoplast-associated kinesin-related protein 1 [Oryza sativa
subsp. japonica]
Length = 817
Score = 45.8 bits (107), Expect = 2e-04
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 4 SGGHSAAW-VRKSLNILQFSLNRPSSLCCVDED-GDEEMEIDEEDVE 48
+G S W R+SL++L+ SL+RP++ + ED GD EMEIDE DVE
Sbjct: 184 NGSFSTGWNARRSLHLLKMSLSRPTTFQTIHEDSGDVEMEIDENDVE 230
>gb|AAN16471.1| phragmoplast-associated kinesin-related protein 1-like protein
[Arabidopsis thaliana] gi|23268687|gb|AAN16470.1|
phragmoplast-associated kinesin-related protein 1-like
protein [Arabidopsis thaliana]
gi|21703149|gb|AAM74514.1| AT3g23670/MDB19_16
[Arabidopsis thaliana] gi|22331291|ref|NP_189009.2|
phragmoplast-associated kinesin-related protein,
putative [Arabidopsis thaliana]
Length = 1313
Score = 45.4 bits (106), Expect = 3e-04
Identities = 24/49 (48%), Positives = 34/49 (68%), Gaps = 2/49 (4%)
Query: 2 DPSGGHSAAW-VRKSLNILQ-FSLNRPSSLCCVDEDGDEEMEIDEEDVE 48
+P+ ++ +W R+SL++L+ F L P SL D+DGD EMEIDEE VE
Sbjct: 472 NPNAAYTTSWNARRSLSLLRSFGLGHPKSLPNGDDDGDTEMEIDEEAVE 520
>dbj|BAB02786.1| kinesin-like protein [Arabidopsis thaliana]
Length = 1268
Score = 45.4 bits (106), Expect = 3e-04
Identities = 24/49 (48%), Positives = 34/49 (68%), Gaps = 2/49 (4%)
Query: 2 DPSGGHSAAW-VRKSLNILQ-FSLNRPSSLCCVDEDGDEEMEIDEEDVE 48
+P+ ++ +W R+SL++L+ F L P SL D+DGD EMEIDEE VE
Sbjct: 427 NPNAAYTTSWNARRSLSLLRSFGLGHPKSLPNGDDDGDTEMEIDEEAVE 475
>emb|CAB10194.1| kinesin like protein [Arabidopsis thaliana]
gi|7268120|emb|CAB78457.1| kinesin like protein
[Arabidopsis thaliana] gi|7428718|pir||H71402 probable
kinesin - Arabidopsis thaliana
Length = 1662
Score = 44.7 bits (104), Expect = 5e-04
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 2 DPSGGHSAAW-VRKSLNILQ-FSLNRPSSLCCVDEDGDEEMEIDEEDVE 48
+P+ +S AW R+SLN+L+ F L P SL D DGD EMEIDE VE
Sbjct: 457 NPNVAYSTAWNARRSLNLLRSFGLGHPRSLPHEDNDGDIEMEIDEAAVE 505
>gb|AAF78894.1| phragmoplast-associated kinesin-related protein 1 [Arabidopsis
thaliana] gi|8745333|gb|AAF78893.1|
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] gi|18414153|ref|NP_567423.1|
phragmoplast-associated kinesin-related protein (PAKRP1)
[Arabidopsis thaliana]
Length = 1292
Score = 44.7 bits (104), Expect = 5e-04
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 2 DPSGGHSAAW-VRKSLNILQ-FSLNRPSSLCCVDEDGDEEMEIDEEDVE 48
+P+ +S AW R+SLN+L+ F L P SL D DGD EMEIDE VE
Sbjct: 466 NPNVAYSTAWNARRSLNLLRSFGLGHPRSLPHEDNDGDIEMEIDEAAVE 514
>ref|XP_465748.1| putative phragmoplast-associated kinesin-related protein 1 [Oryza
sativa (japonica cultivar-group)]
gi|47848099|dbj|BAD21882.1| putative
phragmoplast-associated kinesin-related protein 1 [Oryza
sativa (japonica cultivar-group)]
Length = 1106
Score = 43.9 bits (102), Expect = 0.001
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 4 SGGHSAAWVRKSLNILQFSLNRPSSLCCVDEDGDEEMEIDEEDVE 48
+G S W ++ +L+ SL+RP++ + +D DEEMEID+ DVE
Sbjct: 492 NGSPSTGWNSQNSFLLKMSLSRPTAFPTIKDDSDEEMEIDDNDVE 536
>gb|AAV35794.1| kinesin heavy chain, putative [Oryza sativa (japonica
cultivar-group)]
Length = 1129
Score = 41.2 bits (95), Expect = 0.006
Identities = 21/46 (45%), Positives = 32/46 (68%)
Query: 4 SGGHSAAWVRKSLNILQFSLNRPSSLCCVDEDGDEEMEIDEEDVED 49
+G SA R+SL+ L+ SLNR L ++ D +EEM++DEEDV++
Sbjct: 475 NGYFSAQNARESLHNLRVSLNRSLILPHIEVDSEEEMDVDEEDVQE 520
>gb|AAK91821.1| kinesin heavy chain [Zea mays]
Length = 857
Score = 41.2 bits (95), Expect = 0.006
Identities = 20/42 (47%), Positives = 29/42 (68%)
Query: 8 SAAWVRKSLNILQFSLNRPSSLCCVDEDGDEEMEIDEEDVED 49
SA R+SL+ L+ SLNR ++ D +EEM++DEEDV+D
Sbjct: 246 SAQSARESLHTLRVSLNRSLIFPHIEVDSEEEMDVDEEDVQD 287
>dbj|BAB01875.1| unnamed protein product [Arabidopsis thaliana]
Length = 1103
Score = 38.9 bits (89), Expect = 0.030
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 13 RKSLNILQFSLNRPSSLCCVDEDGDEEMEIDEEDVED-HVQVNFVSGNHNK 62
R+SLN L+ SLNR L +D D +EE+ +DE+D ++ H+Q+ + G+ N+
Sbjct: 477 RESLNQLRVSLNRSLMLPKIDND-EEEITVDEDDFKELHLQIKSLRGSFNQ 526
>ref|NP_188650.2| kinesin motor family protein [Arabidopsis thaliana]
Length = 1114
Score = 38.9 bits (89), Expect = 0.030
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 13 RKSLNILQFSLNRPSSLCCVDEDGDEEMEIDEEDVED-HVQVNFVSGNHNK 62
R+SLN L+ SLNR L +D D +EE+ +DE+D ++ H+Q+ + G+ N+
Sbjct: 488 RESLNQLRVSLNRSLMLPKIDND-EEEITVDEDDFKELHLQIKSLRGSFNQ 537
>ref|NP_705244.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23615489|emb|CAD52480.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 983
Score = 37.7 bits (86), Expect = 0.067
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 13 RKSLNILQFSLNRPSSLCCV----------DEDGDEEMEIDEEDVED-HVQVNFVSGNHN 61
++ N L+F RP L ++D D E E+DEED E+ Q N+ + N+N
Sbjct: 731 KEKRNNLEFLKERPGKLDATPIKRHYHKPQEDDDDNEEEVDEEDDEEAENQKNYNNNNNN 790
Query: 62 KMNIADQDLAQLTEKKNNPCGFQASIKDSFEVKLEQELN 100
N D +P + +IK VKL++ +N
Sbjct: 791 NNNNTDDAFFFNMNMDMSPRKLKENIKLKENVKLKENIN 829
>gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
Length = 527
Score = 37.7 bits (86), Expect = 0.067
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 17 NILQFSLNRPSSLCCVDEDGDEEMEIDEEDVEDHVQVNFVSGNHNKMNIADQDLAQLTEK 76
N LQ L S +ED DEE E +EE+ E+ S N N+ ++ DQ L ++
Sbjct: 182 NSLQDRLGALSQSPRDEEDDDEEDEEEEEEEEEESVKQHNSSNPNRGHLIDQQLPHFQQQ 241
Query: 77 KNNP-CGFQASIKDSFEVKL 95
+ P CG A + E+ L
Sbjct: 242 QTLPGCGTDAELSPKEELML 261
>ref|XP_635998.1| hypothetical protein DDB0188660 [Dictyostelium discoideum]
gi|60464335|gb|EAL62484.1| hypothetical protein
DDB0188660 [Dictyostelium discoideum]
Length = 1550
Score = 37.0 bits (84), Expect = 0.11
Identities = 17/47 (36%), Positives = 24/47 (50%)
Query: 33 DEDGDEEMEIDEEDVEDHVQVNFVSGNHNKMNIADQDLAQLTEKKNN 79
DE GDE+ E D+ D E V + S HN +N + L++ NN
Sbjct: 766 DEGGDEKDEYDDGDDESSVNIRIKSSKHNSINSSVDSTIDLSKNNNN 812
>gb|AAW42674.1| hypothetical protein CNC05970 [Cryptococcus neoformans var.
neoformans JEC21] gi|50259308|gb|EAL21981.1| hypothetical
protein CNBC1210 [Cryptococcus neoformans var. neoformans
B-3501A] gi|58265650|ref|XP_569981.1| hypothetical
protein CNC05970 [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1137
Score = 35.4 bits (80), Expect = 0.33
Identities = 20/69 (28%), Positives = 37/69 (52%), Gaps = 2/69 (2%)
Query: 12 VRKSLNILQFSLNRPSSLCCVDEDGDEEMEIDEEDVEDHVQVNFVSGNHNKMNIADQDLA 71
V SLNI + +++ L DE+ +EE E +EE+ E+ N G+ +K + + +LA
Sbjct: 956 VMASLNIGETTMDEAGDLA--DEESEEEAEDEEEEEEERQLANLEEGDEDKSDTSSMNLA 1013
Query: 72 QLTEKKNNP 80
++ +P
Sbjct: 1014 SPKQEALSP 1022
>ref|XP_593648.1| PREDICTED: similar to putative NFkB activating protein, partial
[Bos taurus]
Length = 249
Score = 35.0 bits (79), Expect = 0.43
Identities = 23/72 (31%), Positives = 38/72 (51%), Gaps = 5/72 (6%)
Query: 22 SLNRPSSLCCVDEDGDEEMEIDEEDVEDH----VQVNFVSGNHNKMNIADQDLAQLTEKK 77
++ + +SLC D D DEE DEEDVE ++N V G K + + +AQ
Sbjct: 72 AIEKMASLCMRDPDEDEEEGTDEEDVEADDDLLAELNEVLGEEQKASESHPPVAQPKATT 131
Query: 78 NNPCGFQASIKD 89
+P G +A++++
Sbjct: 132 PSP-GLEATLQE 142
>ref|XP_646505.1| hypothetical protein DDB0216735 [Dictyostelium discoideum]
gi|60474921|gb|EAL72858.1| hypothetical protein
DDB0216735 [Dictyostelium discoideum]
Length = 1595
Score = 35.0 bits (79), Expect = 0.43
Identities = 21/67 (31%), Positives = 37/67 (54%), Gaps = 2/67 (2%)
Query: 33 DEDGDEEMEIDEEDVEDHVQVNFVSGNHNKMNIADQDLAQLTEKKNNPCGFQASIKDSFE 92
+ED +EE E DEED ED V+ + V + ++ +++ + +K N Q+ I+DS +
Sbjct: 1391 EEDEEEEEEDDEEDEEDEVEEDDVDEDDDEEE--QEEIVNIDYRKLNQIYKQSEIQDSLK 1448
Query: 93 VKLEQEL 99
+ Q L
Sbjct: 1449 ILFGQLL 1455
>emb|CAH79498.1| u5 small nuclear ribonucleoprotein-specific protein, putative
[Plasmodium chabaudi]
Length = 1538
Score = 34.7 bits (78), Expect = 0.57
Identities = 21/63 (33%), Positives = 31/63 (48%)
Query: 27 SSLCCVDEDGDEEMEIDEEDVEDHVQVNFVSGNHNKMNIADQDLAQLTEKKNNPCGFQAS 86
S L DE+ DEE E DEE+ E+ + SGN ++ D +L +KN S
Sbjct: 244 SELSLDDEEEDEEEEDDEEEEEEESEEEDDSGNDDEEGKEDNELTLKKGRKNKKYETHLS 303
Query: 87 IKD 89
+K+
Sbjct: 304 LKN 306
>emb|CAD01138.1| conserved hypothetical protein [Neurospora crassa]
Length = 586
Score = 34.3 bits (77), Expect = 0.74
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 25 RPSSLCCVDEDGDEEMEIDEEDVEDHVQVNFVSGNHNKMNIADQD 69
RP+ + D DE+ ++DEED ++ + + G+HN AD+D
Sbjct: 385 RPTHVNLTDGAADEDDDVDEEDQAHMLEEDDIIGSHNSGEYADED 429
>gb|AAU44601.1| hypothetical protein AT5G55520 [Arabidopsis thaliana]
Length = 805
Score = 34.3 bits (77), Expect = 0.74
Identities = 16/49 (32%), Positives = 29/49 (58%)
Query: 3 PSGGHSAAWVRKSLNILQFSLNRPSSLCCVDEDGDEEMEIDEEDVEDHV 51
P G + +VR+SL+ L+ S+N+ + C + G E+ + EE+ +D V
Sbjct: 145 PDGSKNGYFVRESLSQLRNSINKSLVMSCENRQGSEKETMYEEEYDDDV 193
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,413,569
Number of Sequences: 2540612
Number of extensions: 7932231
Number of successful extensions: 34254
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 34110
Number of HSP's gapped (non-prelim): 148
length of query: 113
length of database: 863,360,394
effective HSP length: 89
effective length of query: 24
effective length of database: 637,245,926
effective search space: 15293902224
effective search space used: 15293902224
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC147538.7